Query 016660
Match_columns 385
No_of_seqs 140 out of 1504
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 08:51:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016660.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016660hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 5.1E-67 1.1E-71 476.6 33.7 336 14-384 1-338 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 8.8E-66 1.9E-70 457.9 33.0 365 15-383 1-366 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 1.1E-63 2.5E-68 437.0 34.4 370 12-383 3-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 2.1E-60 4.6E-65 419.8 30.9 340 15-385 3-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.5E-58 3.3E-63 406.9 30.0 347 10-384 3-355 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 4.9E-55 1.1E-59 419.9 36.8 371 12-383 6-381 (381)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 1.2E-54 2.6E-59 416.1 36.5 362 17-381 1-370 (371)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.7E-54 3.8E-59 414.3 36.8 365 17-383 2-368 (368)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.3E-54 2.8E-59 414.1 35.6 355 16-382 1-357 (358)
10 cd08301 alcohol_DH_plants Plan 100.0 7E-54 1.5E-58 410.7 37.2 366 15-382 1-369 (369)
11 cd08300 alcohol_DH_class_III c 100.0 1.4E-53 3E-58 408.3 37.6 365 16-382 2-368 (368)
12 cd08239 THR_DH_like L-threonin 100.0 8.8E-53 1.9E-57 398.7 35.8 336 17-383 1-339 (339)
13 PLN02827 Alcohol dehydrogenase 100.0 1.1E-52 2.3E-57 402.8 36.7 363 15-384 11-377 (378)
14 cd08277 liver_alcohol_DH_like 100.0 6.5E-52 1.4E-56 396.3 37.0 363 15-382 1-365 (365)
15 PRK09880 L-idonate 5-dehydroge 100.0 6E-52 1.3E-56 393.4 35.0 337 15-383 3-343 (343)
16 COG1063 Tdh Threonine dehydrog 100.0 1.2E-51 2.6E-56 389.9 34.2 342 17-383 1-350 (350)
17 TIGR02819 fdhA_non_GSH formald 100.0 3.1E-51 6.8E-56 393.5 33.8 346 17-384 3-391 (393)
18 PLN02586 probable cinnamyl alc 100.0 5.4E-50 1.2E-54 381.8 34.7 339 12-383 8-353 (360)
19 PRK10309 galactitol-1-phosphat 100.0 1.7E-49 3.7E-54 377.4 35.4 340 17-384 1-347 (347)
20 COG0604 Qor NADPH:quinone redu 100.0 5.8E-50 1.3E-54 373.6 29.1 316 17-383 1-326 (326)
21 PLN02178 cinnamyl-alcohol dehy 100.0 8.2E-49 1.8E-53 374.9 35.1 332 19-383 9-348 (375)
22 TIGR03201 dearomat_had 6-hydro 100.0 1E-48 2.2E-53 372.1 33.9 332 20-383 2-349 (349)
23 cd08230 glucose_DH Glucose deh 100.0 1.4E-48 3E-53 372.2 33.8 334 17-383 1-355 (355)
24 cd08231 MDR_TM0436_like Hypoth 100.0 6.1E-48 1.3E-52 368.7 36.3 347 18-383 2-361 (361)
25 cd08299 alcohol_DH_class_I_II_ 100.0 1.5E-47 3.2E-52 366.9 38.8 367 13-383 4-373 (373)
26 cd05279 Zn_ADH1 Liver alcohol 100.0 6.6E-48 1.4E-52 368.7 36.2 361 17-381 1-364 (365)
27 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.7E-48 5.8E-53 365.8 32.7 321 20-381 2-328 (329)
28 cd08233 butanediol_DH_like (2R 100.0 2.4E-47 5.2E-52 363.2 35.3 335 17-381 1-350 (351)
29 cd08278 benzyl_alcohol_DH Benz 100.0 4.2E-47 9.1E-52 363.1 36.7 364 15-382 1-365 (365)
30 PLN02514 cinnamyl-alcohol dehy 100.0 7.2E-47 1.6E-51 360.2 35.7 341 15-384 8-351 (357)
31 cd08237 ribitol-5-phosphate_DH 100.0 5.4E-47 1.2E-51 358.8 29.1 323 15-384 1-340 (341)
32 cd08238 sorbose_phosphate_red 100.0 7.6E-46 1.7E-50 359.3 33.7 331 15-384 1-369 (410)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 2.8E-45 6.1E-50 349.0 35.8 343 17-383 1-351 (351)
34 PRK10083 putative oxidoreducta 100.0 4.4E-45 9.4E-50 346.1 34.4 335 17-385 1-339 (339)
35 KOG1197 Predicted quinone oxid 100.0 2.1E-46 4.6E-51 318.9 22.5 318 12-384 4-331 (336)
36 cd08296 CAD_like Cinnamyl alco 100.0 1.9E-44 4.1E-49 340.8 34.3 331 17-382 1-333 (333)
37 cd08279 Zn_ADH_class_III Class 100.0 4E-44 8.6E-49 342.5 36.1 361 17-381 1-362 (363)
38 cd08283 FDH_like_1 Glutathione 100.0 1.1E-43 2.4E-48 341.8 36.1 354 17-383 1-386 (386)
39 TIGR01202 bchC 2-desacetyl-2-h 100.0 2E-44 4.3E-49 336.6 28.8 303 16-382 1-308 (308)
40 cd08286 FDH_like_ADH2 formalde 100.0 1.7E-43 3.6E-48 336.0 35.1 338 17-383 1-345 (345)
41 cd05278 FDH_like Formaldehyde 100.0 1.8E-43 3.9E-48 336.0 33.7 341 17-383 1-347 (347)
42 cd05284 arabinose_DH_like D-ar 100.0 3.6E-43 7.7E-48 333.1 34.1 333 17-383 1-340 (340)
43 cd08263 Zn_ADH10 Alcohol dehyd 100.0 6.6E-43 1.4E-47 334.6 35.0 361 17-382 1-367 (367)
44 cd08256 Zn_ADH2 Alcohol dehydr 100.0 5.1E-43 1.1E-47 333.4 33.9 335 17-381 1-350 (350)
45 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.2E-42 2.6E-47 330.1 35.2 339 17-382 1-344 (345)
46 KOG0025 Zn2+-binding dehydroge 100.0 5.2E-43 1.1E-47 303.5 26.3 319 12-384 15-353 (354)
47 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.6E-42 5.7E-47 328.4 34.0 336 17-382 1-349 (350)
48 cd08246 crotonyl_coA_red croto 100.0 2.7E-42 5.9E-47 333.3 33.2 339 13-381 9-391 (393)
49 PRK05396 tdh L-threonine 3-deh 100.0 5E-42 1.1E-46 325.4 34.2 337 17-384 1-341 (341)
50 cd08287 FDH_like_ADH3 formalde 100.0 6E-42 1.3E-46 325.3 34.5 336 17-383 1-345 (345)
51 cd08242 MDR_like Medium chain 100.0 8.7E-42 1.9E-46 320.7 33.3 317 17-383 1-319 (319)
52 cd08282 PFDH_like Pseudomonas 100.0 1.4E-41 3E-46 326.3 34.9 344 17-383 1-375 (375)
53 cd08291 ETR_like_1 2-enoyl thi 100.0 4.1E-42 8.9E-47 323.7 30.2 310 17-382 1-324 (324)
54 cd08284 FDH_like_2 Glutathione 100.0 2E-41 4.4E-46 321.5 35.1 339 17-382 1-343 (344)
55 cd08235 iditol_2_DH_like L-idi 100.0 2E-41 4.3E-46 321.5 34.8 337 17-382 1-343 (343)
56 PRK13771 putative alcohol dehy 100.0 9.7E-42 2.1E-46 322.4 31.9 331 17-383 1-333 (334)
57 cd08261 Zn_ADH7 Alcohol dehydr 100.0 3.5E-41 7.5E-46 319.1 35.5 334 17-383 1-337 (337)
58 PLN02702 L-idonate 5-dehydroge 100.0 3E-41 6.5E-46 322.8 35.3 335 17-382 18-363 (364)
59 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.1E-41 4.6E-46 325.9 34.3 335 17-381 29-383 (384)
60 cd05285 sorbitol_DH Sorbitol d 100.0 5.1E-41 1.1E-45 318.7 34.5 332 19-381 1-341 (343)
61 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.8E-41 1E-45 318.0 34.1 334 17-383 1-338 (338)
62 PRK09422 ethanol-active dehydr 100.0 6.3E-41 1.4E-45 317.4 34.7 333 17-384 1-337 (338)
63 TIGR03366 HpnZ_proposed putati 100.0 2.8E-42 6.2E-47 317.9 24.1 270 73-364 1-280 (280)
64 cd05283 CAD1 Cinnamyl alcohol 100.0 4E-41 8.7E-46 318.6 31.9 335 18-382 1-337 (337)
65 TIGR01751 crot-CoA-red crotony 100.0 5.7E-41 1.2E-45 324.3 33.3 342 13-384 4-388 (398)
66 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.6E-40 5.6E-45 313.6 33.9 324 17-382 1-341 (341)
67 cd08236 sugar_DH NAD(P)-depend 100.0 3.7E-40 8E-45 312.8 34.8 337 17-381 1-343 (343)
68 cd08234 threonine_DH_like L-th 100.0 4.1E-40 8.8E-45 311.3 34.5 332 17-381 1-333 (334)
69 cd05281 TDH Threonine dehydrog 100.0 3.2E-40 7E-45 313.0 33.5 336 17-383 1-341 (341)
70 PLN03154 putative allyl alcoho 100.0 2.1E-40 4.4E-45 314.5 31.4 316 13-385 5-347 (348)
71 cd08297 CAD3 Cinnamyl alcohol 100.0 7.4E-40 1.6E-44 310.5 34.9 335 17-383 1-341 (341)
72 cd08259 Zn_ADH5 Alcohol dehydr 100.0 7.5E-40 1.6E-44 308.9 33.5 330 17-382 1-332 (332)
73 cd08232 idonate-5-DH L-idonate 100.0 7.7E-40 1.7E-44 310.1 33.6 332 21-383 2-339 (339)
74 cd08292 ETR_like_2 2-enoyl thi 100.0 3.6E-40 7.9E-45 310.2 30.6 310 17-382 1-324 (324)
75 cd08266 Zn_ADH_like1 Alcohol d 100.0 2E-39 4.4E-44 306.8 32.9 336 17-383 1-342 (342)
76 TIGR00692 tdh L-threonine 3-de 100.0 2.2E-39 4.7E-44 307.2 33.0 331 23-383 5-340 (340)
77 cd08274 MDR9 Medium chain dehy 100.0 1.8E-39 3.9E-44 308.9 31.1 324 17-383 1-350 (350)
78 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.6E-39 3.6E-44 306.1 30.3 318 17-376 1-320 (325)
79 cd08295 double_bond_reductase_ 100.0 1.6E-39 3.5E-44 307.8 29.6 313 14-383 5-338 (338)
80 cd08298 CAD2 Cinnamyl alcohol 100.0 5.6E-39 1.2E-43 303.0 32.4 323 17-381 1-329 (329)
81 cd08245 CAD Cinnamyl alcohol d 100.0 6.2E-39 1.3E-43 302.8 32.2 328 18-381 1-330 (330)
82 cd08293 PTGR2 Prostaglandin re 100.0 2.9E-38 6.4E-43 300.0 32.1 300 29-383 23-345 (345)
83 cd08258 Zn_ADH4 Alcohol dehydr 100.0 4E-38 8.7E-43 294.0 30.9 301 17-347 1-306 (306)
84 cd08294 leukotriene_B4_DH_like 100.0 3.7E-38 8E-43 297.3 30.0 305 16-383 2-329 (329)
85 TIGR02825 B4_12hDH leukotriene 100.0 2.8E-38 6E-43 297.8 29.1 291 29-382 19-325 (325)
86 cd08290 ETR 2-enoyl thioester 100.0 6.3E-38 1.4E-42 297.2 29.3 313 17-383 1-341 (341)
87 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.3E-37 5E-42 292.7 30.1 309 18-382 1-334 (336)
88 PRK10754 quinone oxidoreductas 100.0 1.1E-37 2.3E-42 294.0 27.5 315 16-382 1-326 (327)
89 cd08276 MDR7 Medium chain dehy 100.0 1.2E-36 2.5E-41 287.6 33.6 329 17-382 1-335 (336)
90 cd08244 MDR_enoyl_red Possible 100.0 7.9E-37 1.7E-41 287.4 31.9 313 17-383 1-324 (324)
91 PTZ00354 alcohol dehydrogenase 100.0 1.4E-36 3E-41 286.9 30.4 314 16-384 1-329 (334)
92 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.7E-36 5.8E-41 284.0 31.2 313 17-383 1-325 (325)
93 cd08250 Mgc45594_like Mgc45594 100.0 6.3E-36 1.4E-40 282.1 29.2 311 16-382 1-329 (329)
94 cd08249 enoyl_reductase_like e 100.0 7.7E-36 1.7E-40 282.7 29.7 312 17-383 1-339 (339)
95 cd05282 ETR_like 2-enoyl thioe 100.0 1.3E-35 2.7E-40 279.1 29.1 299 29-382 14-323 (323)
96 KOG1198 Zinc-binding oxidoredu 100.0 2.6E-36 5.6E-41 281.8 24.0 302 29-385 20-347 (347)
97 cd08269 Zn_ADH9 Alcohol dehydr 100.0 3.3E-35 7.1E-40 275.0 31.5 303 23-381 2-311 (312)
98 cd08270 MDR4 Medium chain dehy 100.0 1.6E-35 3.4E-40 276.3 28.7 298 17-383 1-305 (305)
99 cd08289 MDR_yhfp_like Yhfp put 100.0 4E-35 8.7E-40 276.2 31.6 315 17-383 1-326 (326)
100 TIGR02823 oxido_YhdH putative 100.0 1.1E-34 2.4E-39 272.9 32.4 310 18-382 1-322 (323)
101 cd08243 quinone_oxidoreductase 100.0 6E-35 1.3E-39 273.9 30.1 312 17-381 1-319 (320)
102 cd08252 AL_MDR Arginate lyase 100.0 1.1E-34 2.4E-39 274.4 30.6 313 17-382 1-336 (336)
103 cd08288 MDR_yhdh Yhdh putative 100.0 7.7E-34 1.7E-38 267.3 30.7 313 17-383 1-324 (324)
104 cd05276 p53_inducible_oxidored 100.0 6.3E-34 1.4E-38 266.6 29.8 310 17-381 1-323 (323)
105 cd05286 QOR2 Quinone oxidoredu 100.0 1.9E-33 4.1E-38 263.0 31.3 310 18-383 1-320 (320)
106 COG2130 Putative NADP-dependen 100.0 8.4E-34 1.8E-38 248.8 26.8 299 29-385 27-340 (340)
107 cd08253 zeta_crystallin Zeta-c 100.0 2.4E-33 5.2E-38 263.1 31.6 316 17-383 1-325 (325)
108 cd08248 RTN4I1 Human Reticulon 100.0 5.3E-34 1.2E-38 271.3 26.1 308 17-381 1-349 (350)
109 cd08271 MDR5 Medium chain dehy 100.0 1.4E-33 2.9E-38 265.3 28.2 310 17-383 1-325 (325)
110 cd05188 MDR Medium chain reduc 100.0 1E-33 2.3E-38 258.9 25.9 268 43-343 1-270 (271)
111 cd08272 MDR6 Medium chain dehy 100.0 2.6E-33 5.6E-38 263.2 29.2 311 17-383 1-326 (326)
112 cd08247 AST1_like AST1 is a cy 100.0 5E-33 1.1E-37 264.9 30.7 316 18-383 2-352 (352)
113 cd08268 MDR2 Medium chain dehy 100.0 1.4E-32 3E-37 258.3 31.2 316 17-382 1-327 (328)
114 cd05288 PGDH Prostaglandin deh 100.0 5.2E-33 1.1E-37 262.1 28.1 306 17-381 2-329 (329)
115 cd08273 MDR8 Medium chain dehy 100.0 1.1E-32 2.4E-37 260.1 28.3 306 18-381 2-330 (331)
116 TIGR02824 quinone_pig3 putativ 100.0 1.9E-32 4.1E-37 257.1 29.3 312 17-383 1-325 (325)
117 cd08251 polyketide_synthase po 100.0 1.2E-31 2.6E-36 249.3 28.2 292 36-381 2-303 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 7.4E-32 1.6E-36 251.3 26.5 301 17-381 1-309 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 5E-31 1.1E-35 247.1 30.1 309 17-381 1-322 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 7.4E-31 1.6E-35 247.9 30.6 311 18-383 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 2.3E-30 5E-35 242.7 26.6 295 30-381 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 1.9E-30 4.2E-35 239.3 23.8 282 42-381 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 5.6E-30 1.2E-34 235.9 23.8 277 46-381 2-288 (288)
124 cd08255 2-desacetyl-2-hydroxye 100.0 7.5E-28 1.6E-32 221.6 25.0 246 69-381 19-277 (277)
125 KOG1196 Predicted NAD-dependen 100.0 7.2E-27 1.6E-31 204.5 24.4 294 32-384 27-341 (343)
126 KOG1202 Animal-type fatty acid 100.0 1.2E-27 2.6E-32 238.1 17.2 292 29-383 1429-1741(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 3.7E-24 7.9E-29 168.4 7.7 108 41-170 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 7.8E-18 1.7E-22 136.8 13.2 129 212-346 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 3.9E-13 8.4E-18 128.0 16.5 175 190-383 189-376 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 6.5E-12 1.4E-16 122.7 13.9 152 199-356 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 2.2E-12 4.7E-17 104.2 3.0 120 245-381 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 4.9E-07 1.1E-11 82.9 12.8 161 196-371 72-246 (272)
133 PF11017 DUF2855: Protein of u 98.5 1.7E-06 3.7E-11 79.1 11.6 139 155-304 90-234 (314)
134 TIGR00561 pntA NAD(P) transhyd 98.4 1.6E-06 3.4E-11 85.0 11.1 105 200-306 162-289 (511)
135 TIGR01035 hemA glutamyl-tRNA r 98.4 1.6E-08 3.6E-13 98.0 -4.3 161 73-282 89-253 (417)
136 PRK05476 S-adenosyl-L-homocyst 98.3 5.9E-06 1.3E-10 79.4 11.3 102 190-304 199-302 (425)
137 TIGR00936 ahcY adenosylhomocys 98.1 1.7E-05 3.8E-10 75.8 10.7 92 199-303 192-284 (406)
138 PRK08306 dipicolinate synthase 98.1 5.9E-05 1.3E-09 69.8 13.9 111 201-325 151-261 (296)
139 PRK00517 prmA ribosomal protei 98.1 6.5E-05 1.4E-09 67.9 13.6 128 155-303 78-215 (250)
140 cd05213 NAD_bind_Glutamyl_tRNA 98.1 8.6E-06 1.9E-10 76.0 7.7 108 165-282 139-251 (311)
141 PLN02494 adenosylhomocysteinas 98.0 7.5E-05 1.6E-09 72.2 11.3 101 190-303 241-343 (477)
142 PRK12771 putative glutamate sy 97.8 1.2E-05 2.6E-10 81.5 3.3 80 198-281 133-234 (564)
143 COG2518 Pcm Protein-L-isoaspar 97.8 0.00022 4.7E-09 61.4 9.8 121 171-302 44-170 (209)
144 TIGR00406 prmA ribosomal prote 97.7 0.00025 5.4E-09 65.5 9.7 97 199-303 157-261 (288)
145 TIGR02853 spore_dpaA dipicolin 97.7 0.00093 2E-08 61.5 13.3 96 201-306 150-245 (287)
146 TIGR00518 alaDH alanine dehydr 97.7 0.00054 1.2E-08 65.5 11.9 98 201-304 166-270 (370)
147 PRK08324 short chain dehydroge 97.7 0.00031 6.8E-09 72.9 11.1 136 155-303 386-559 (681)
148 PRK00045 hemA glutamyl-tRNA re 97.6 9.7E-05 2.1E-09 72.0 6.2 161 73-282 91-255 (423)
149 PF01488 Shikimate_DH: Shikima 97.5 0.00029 6.3E-09 57.2 6.9 76 199-281 9-87 (135)
150 PTZ00075 Adenosylhomocysteinas 97.5 0.00074 1.6E-08 65.6 10.5 92 199-303 251-343 (476)
151 PRK00377 cbiT cobalt-precorrin 97.4 0.0025 5.3E-08 55.4 11.6 102 195-300 34-144 (198)
152 PRK11705 cyclopropane fatty ac 97.2 0.003 6.5E-08 60.7 10.2 113 181-301 147-267 (383)
153 KOG1209 1-Acyl dihydroxyaceton 97.2 0.0053 1.1E-07 52.7 10.3 109 201-311 6-148 (289)
154 COG2242 CobL Precorrin-6B meth 97.1 0.0088 1.9E-07 50.6 11.2 103 195-303 28-137 (187)
155 PF13460 NAD_binding_10: NADH( 97.1 0.009 2E-07 50.9 11.3 94 205-304 1-100 (183)
156 PRK05693 short chain dehydroge 97.0 0.0072 1.6E-07 55.2 11.1 76 203-279 2-82 (274)
157 COG4221 Short-chain alcohol de 97.0 0.0032 6.9E-08 55.4 8.0 78 201-279 5-91 (246)
158 TIGR02469 CbiT precorrin-6Y C5 97.0 0.012 2.6E-07 46.4 11.0 101 195-301 13-122 (124)
159 PRK14967 putative methyltransf 97.0 0.033 7.1E-07 49.3 14.8 98 196-301 31-159 (223)
160 COG3967 DltE Short-chain dehyd 97.0 0.0034 7.4E-08 53.5 7.7 78 201-279 4-88 (245)
161 PRK13943 protein-L-isoaspartat 97.0 0.0094 2E-07 55.7 11.5 103 193-300 72-179 (322)
162 COG0300 DltE Short-chain dehyd 96.9 0.019 4.2E-07 51.7 12.6 80 199-279 3-94 (265)
163 PRK05786 fabG 3-ketoacyl-(acyl 96.9 0.017 3.6E-07 51.4 12.3 101 201-303 4-137 (238)
164 PRK06139 short chain dehydroge 96.9 0.0061 1.3E-07 57.5 9.5 78 201-279 6-94 (330)
165 PRK05993 short chain dehydroge 96.9 0.0062 1.4E-07 55.8 9.2 78 201-279 3-86 (277)
166 PRK13942 protein-L-isoaspartat 96.8 0.022 4.8E-07 50.0 12.1 100 193-300 68-175 (212)
167 PRK07806 short chain dehydroge 96.8 0.023 5E-07 50.9 12.6 100 201-302 5-135 (248)
168 PF12847 Methyltransf_18: Meth 96.8 0.01 2.3E-07 46.0 9.0 92 201-300 1-110 (112)
169 COG1748 LYS9 Saccharopine dehy 96.8 0.017 3.7E-07 54.9 11.6 97 203-304 2-102 (389)
170 PRK13944 protein-L-isoaspartat 96.8 0.016 3.4E-07 50.7 10.5 101 193-300 64-172 (205)
171 TIGR00438 rrmJ cell division p 96.8 0.017 3.6E-07 49.7 10.6 100 197-301 28-146 (188)
172 PRK12939 short chain dehydroge 96.7 0.029 6.3E-07 50.2 12.3 78 201-279 6-94 (250)
173 PRK13940 glutamyl-tRNA reducta 96.7 0.0098 2.1E-07 57.6 9.5 77 199-282 178-255 (414)
174 PLN03209 translocon at the inn 96.7 0.029 6.4E-07 56.1 12.9 105 195-304 73-210 (576)
175 PRK07109 short chain dehydroge 96.6 0.032 6.8E-07 52.8 12.4 78 201-279 7-95 (334)
176 PF01135 PCMT: Protein-L-isoas 96.6 0.0065 1.4E-07 53.1 7.1 101 193-300 64-171 (209)
177 PRK08265 short chain dehydroge 96.6 0.039 8.5E-07 50.0 12.5 78 201-279 5-90 (261)
178 PRK08628 short chain dehydroge 96.6 0.04 8.7E-07 49.7 12.3 78 201-279 6-93 (258)
179 PRK12742 oxidoreductase; Provi 96.6 0.043 9.3E-07 48.7 12.2 98 201-303 5-133 (237)
180 PF02826 2-Hacid_dh_C: D-isome 96.5 0.0084 1.8E-07 51.1 7.1 91 199-302 33-128 (178)
181 PRK03369 murD UDP-N-acetylmura 96.5 0.014 3E-07 58.1 9.5 75 198-281 8-82 (488)
182 cd01080 NAD_bind_m-THF_DH_Cycl 96.5 0.027 5.9E-07 47.4 9.8 97 179-303 21-118 (168)
183 PF06325 PrmA: Ribosomal prote 96.5 0.0083 1.8E-07 55.2 7.2 135 155-304 119-262 (295)
184 PRK12829 short chain dehydroge 96.5 0.016 3.5E-07 52.4 9.1 82 198-280 7-97 (264)
185 PF13241 NAD_binding_7: Putati 96.4 0.009 2E-07 45.9 6.0 89 201-304 6-94 (103)
186 PRK06182 short chain dehydroge 96.4 0.016 3.4E-07 52.9 8.6 78 201-279 2-84 (273)
187 COG1179 Dinucleotide-utilizing 96.4 0.056 1.2E-06 47.5 11.2 103 201-304 29-156 (263)
188 PF02353 CMAS: Mycolic acid cy 96.4 0.02 4.3E-07 52.4 9.0 100 193-302 54-167 (273)
189 PRK08017 oxidoreductase; Provi 96.4 0.018 4E-07 51.8 8.9 76 203-279 3-84 (256)
190 PRK15116 sulfur acceptor prote 96.4 0.091 2E-06 47.7 13.1 104 201-304 29-156 (268)
191 PRK07326 short chain dehydroge 96.4 0.061 1.3E-06 47.7 12.1 78 201-279 5-92 (237)
192 PRK07060 short chain dehydroge 96.4 0.025 5.5E-07 50.5 9.6 75 201-279 8-87 (245)
193 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.046 9.9E-07 53.9 12.1 79 200-279 208-294 (450)
194 PF03435 Saccharop_dh: Sacchar 96.3 0.034 7.3E-07 53.7 10.8 91 205-300 1-97 (386)
195 KOG1205 Predicted dehydrogenas 96.3 0.086 1.9E-06 48.0 12.5 110 200-310 10-158 (282)
196 COG2226 UbiE Methylase involve 96.3 0.06 1.3E-06 47.9 11.3 108 193-305 43-160 (238)
197 PF00670 AdoHcyase_NAD: S-aden 96.3 0.046 9.9E-07 45.4 9.8 92 199-303 20-112 (162)
198 PRK09291 short chain dehydroge 96.3 0.03 6.5E-07 50.4 9.8 74 202-279 2-83 (257)
199 PRK06128 oxidoreductase; Provi 96.3 0.074 1.6E-06 49.3 12.6 101 201-303 54-193 (300)
200 PRK06718 precorrin-2 dehydroge 96.3 0.017 3.6E-07 50.3 7.7 92 201-303 9-102 (202)
201 PRK05866 short chain dehydroge 96.3 0.03 6.5E-07 51.8 9.8 78 201-279 39-127 (293)
202 PRK07814 short chain dehydroge 96.3 0.033 7.2E-07 50.5 9.8 78 201-279 9-97 (263)
203 PRK09186 flagellin modificatio 96.2 0.08 1.7E-06 47.6 12.1 77 201-278 3-92 (256)
204 PRK00107 gidB 16S rRNA methylt 96.2 0.065 1.4E-06 46.0 10.7 96 199-301 43-145 (187)
205 COG0373 HemA Glutamyl-tRNA red 96.2 0.028 6.1E-07 53.9 9.1 96 200-303 176-276 (414)
206 PRK04148 hypothetical protein; 96.2 0.11 2.4E-06 41.7 11.1 88 199-293 14-101 (134)
207 PRK12549 shikimate 5-dehydroge 96.2 0.05 1.1E-06 50.1 10.6 72 200-278 125-201 (284)
208 TIGR02356 adenyl_thiF thiazole 96.2 0.068 1.5E-06 46.6 10.9 99 201-301 20-143 (202)
209 PRK08339 short chain dehydroge 96.2 0.035 7.6E-07 50.4 9.6 78 201-279 7-95 (263)
210 TIGR03325 BphB_TodD cis-2,3-di 96.2 0.037 8.1E-07 50.1 9.7 77 201-278 4-88 (262)
211 PRK12828 short chain dehydroge 96.2 0.065 1.4E-06 47.4 11.0 78 201-279 6-92 (239)
212 PRK08177 short chain dehydroge 96.1 0.038 8.3E-07 48.8 9.3 76 203-279 2-81 (225)
213 PRK05872 short chain dehydroge 96.1 0.039 8.5E-07 51.1 9.8 78 201-279 8-95 (296)
214 PRK07231 fabG 3-ketoacyl-(acyl 96.1 0.045 9.8E-07 49.0 9.8 78 201-279 4-91 (251)
215 PRK06841 short chain dehydroge 96.1 0.042 9.1E-07 49.4 9.6 78 201-279 14-99 (255)
216 TIGR01832 kduD 2-deoxy-D-gluco 96.1 0.052 1.1E-06 48.6 10.1 78 201-279 4-90 (248)
217 TIGR00080 pimt protein-L-isoas 96.1 0.08 1.7E-06 46.6 11.1 100 193-300 69-176 (215)
218 PRK06719 precorrin-2 dehydroge 96.1 0.07 1.5E-06 44.4 10.0 89 201-301 12-100 (157)
219 PRK07831 short chain dehydroge 96.1 0.051 1.1E-06 49.2 10.0 80 199-279 14-107 (262)
220 PRK06949 short chain dehydroge 96.1 0.044 9.5E-07 49.4 9.6 79 200-279 7-96 (258)
221 PRK08217 fabG 3-ketoacyl-(acyl 96.1 0.052 1.1E-06 48.6 10.0 78 201-279 4-92 (253)
222 PRK06500 short chain dehydroge 96.1 0.051 1.1E-06 48.6 9.9 78 201-279 5-90 (249)
223 PRK12429 3-hydroxybutyrate deh 96.1 0.11 2.3E-06 46.8 12.0 78 201-279 3-91 (258)
224 PRK06198 short chain dehydroge 96.1 0.047 1E-06 49.3 9.7 80 200-279 4-94 (260)
225 TIGR01318 gltD_gamma_fam gluta 96.0 0.023 4.9E-07 56.3 8.1 78 201-281 140-238 (467)
226 PRK06484 short chain dehydroge 96.0 0.1 2.2E-06 52.4 13.0 102 200-303 267-402 (520)
227 PRK08267 short chain dehydroge 96.0 0.096 2.1E-06 47.3 11.7 76 203-279 2-87 (260)
228 PRK06194 hypothetical protein; 96.0 0.049 1.1E-06 50.0 9.9 78 201-279 5-93 (287)
229 PRK05867 short chain dehydroge 96.0 0.05 1.1E-06 48.9 9.7 78 201-279 8-96 (253)
230 PRK13394 3-hydroxybutyrate deh 96.0 0.055 1.2E-06 48.8 9.9 78 201-279 6-94 (262)
231 PRK06057 short chain dehydroge 96.0 0.051 1.1E-06 49.0 9.7 78 201-279 6-89 (255)
232 PRK07502 cyclohexadienyl dehyd 96.0 0.052 1.1E-06 50.6 9.8 91 203-302 7-101 (307)
233 PRK08618 ornithine cyclodeamin 96.0 0.1 2.2E-06 49.1 11.7 94 200-304 125-224 (325)
234 COG2264 PrmA Ribosomal protein 96.0 0.08 1.7E-06 48.6 10.5 139 155-304 120-266 (300)
235 cd00755 YgdL_like Family of ac 96.0 0.16 3.5E-06 45.1 12.3 102 201-302 10-135 (231)
236 PRK08264 short chain dehydroge 96.0 0.043 9.4E-07 48.8 8.8 73 201-279 5-83 (238)
237 TIGR01809 Shik-DH-AROM shikima 95.9 0.036 7.8E-07 51.0 8.4 77 201-281 124-202 (282)
238 PRK14175 bifunctional 5,10-met 95.9 0.069 1.5E-06 48.8 9.9 94 181-303 137-232 (286)
239 PRK06180 short chain dehydroge 95.9 0.057 1.2E-06 49.4 9.7 77 202-279 4-88 (277)
240 PRK12937 short chain dehydroge 95.9 0.2 4.4E-06 44.5 13.0 101 201-303 4-141 (245)
241 cd05311 NAD_bind_2_malic_enz N 95.9 0.1 2.2E-06 46.3 10.8 92 200-301 23-128 (226)
242 COG0169 AroE Shikimate 5-dehyd 95.9 0.028 6E-07 51.4 7.2 75 200-280 124-201 (283)
243 CHL00194 ycf39 Ycf39; Provisio 95.9 0.13 2.9E-06 48.0 12.2 95 204-303 2-111 (317)
244 COG4122 Predicted O-methyltran 95.9 0.097 2.1E-06 45.9 10.2 104 196-301 54-166 (219)
245 PRK05653 fabG 3-ketoacyl-(acyl 95.8 0.076 1.6E-06 47.2 9.9 78 201-279 4-92 (246)
246 PRK06200 2,3-dihydroxy-2,3-dih 95.8 0.067 1.5E-06 48.4 9.6 78 201-279 5-90 (263)
247 PRK06181 short chain dehydroge 95.8 0.072 1.6E-06 48.2 9.8 76 203-279 2-88 (263)
248 PRK08219 short chain dehydroge 95.8 0.1 2.2E-06 45.9 10.6 74 203-279 4-81 (227)
249 PRK07063 short chain dehydroge 95.8 0.075 1.6E-06 48.0 9.9 78 201-279 6-96 (260)
250 PRK06196 oxidoreductase; Provi 95.8 0.051 1.1E-06 50.8 9.0 78 201-279 25-109 (315)
251 PRK07478 short chain dehydroge 95.8 0.075 1.6E-06 47.8 9.8 78 201-279 5-93 (254)
252 PRK12809 putative oxidoreducta 95.8 0.035 7.5E-07 57.3 8.4 77 201-280 309-406 (639)
253 PRK11207 tellurite resistance 95.8 0.042 9.1E-07 47.7 7.7 97 196-301 25-134 (197)
254 PRK06172 short chain dehydroge 95.8 0.081 1.8E-06 47.5 9.9 78 201-279 6-94 (253)
255 PRK07062 short chain dehydroge 95.8 0.067 1.4E-06 48.5 9.4 78 201-279 7-97 (265)
256 PRK12823 benD 1,6-dihydroxycyc 95.8 0.061 1.3E-06 48.6 9.1 78 201-279 7-94 (260)
257 PRK12481 2-deoxy-D-gluconate 3 95.8 0.076 1.7E-06 47.8 9.7 78 201-279 7-93 (251)
258 PRK07774 short chain dehydroge 95.7 0.086 1.9E-06 47.2 9.9 78 201-279 5-93 (250)
259 PRK06940 short chain dehydroge 95.7 0.13 2.7E-06 47.2 11.1 76 202-279 2-86 (275)
260 PRK09072 short chain dehydroge 95.7 0.079 1.7E-06 48.0 9.7 78 201-279 4-90 (263)
261 PRK00536 speE spermidine synth 95.7 0.051 1.1E-06 49.1 8.2 99 200-302 71-172 (262)
262 PRK01581 speE spermidine synth 95.7 0.18 3.9E-06 47.6 12.0 98 200-302 149-269 (374)
263 cd01075 NAD_bind_Leu_Phe_Val_D 95.7 0.21 4.5E-06 43.4 11.8 82 200-292 26-108 (200)
264 PRK07523 gluconate 5-dehydroge 95.7 0.083 1.8E-06 47.6 9.7 78 201-279 9-97 (255)
265 PRK00811 spermidine synthase; 95.7 0.08 1.7E-06 48.8 9.5 97 200-301 75-191 (283)
266 TIGR03215 ac_ald_DH_ac acetald 95.7 0.11 2.4E-06 47.6 10.3 86 204-298 3-92 (285)
267 PRK08263 short chain dehydroge 95.7 0.18 3.9E-06 46.0 11.9 77 202-279 3-87 (275)
268 PLN02366 spermidine synthase 95.7 0.087 1.9E-06 49.0 9.7 99 200-301 90-206 (308)
269 PRK07890 short chain dehydroge 95.7 0.093 2E-06 47.2 9.9 78 201-279 4-92 (258)
270 PRK06125 short chain dehydroge 95.7 0.081 1.8E-06 47.8 9.4 75 201-279 6-91 (259)
271 TIGR03840 TMPT_Se_Te thiopurin 95.7 0.11 2.5E-06 45.5 10.0 99 200-302 33-153 (213)
272 PF01262 AlaDh_PNT_C: Alanine 95.7 0.035 7.7E-07 46.8 6.6 100 201-303 19-141 (168)
273 cd01065 NAD_bind_Shikimate_DH 95.7 0.11 2.4E-06 42.9 9.5 95 200-302 17-117 (155)
274 PRK08261 fabG 3-ketoacyl-(acyl 95.6 0.035 7.5E-07 54.8 7.5 94 195-304 27-126 (450)
275 PRK12826 3-ketoacyl-(acyl-carr 95.6 0.09 1.9E-06 47.0 9.6 77 201-279 5-93 (251)
276 PRK07832 short chain dehydroge 95.6 0.15 3.2E-06 46.5 11.1 75 204-279 2-88 (272)
277 PRK06953 short chain dehydroge 95.6 0.069 1.5E-06 47.0 8.7 76 203-279 2-80 (222)
278 PRK08589 short chain dehydroge 95.6 0.085 1.8E-06 48.1 9.4 78 201-279 5-92 (272)
279 PRK08213 gluconate 5-dehydroge 95.6 0.1 2.3E-06 47.0 10.0 78 201-279 11-99 (259)
280 COG2910 Putative NADH-flavin r 95.6 0.083 1.8E-06 44.5 8.1 93 204-304 2-107 (211)
281 PRK07576 short chain dehydroge 95.6 0.098 2.1E-06 47.5 9.6 77 201-278 8-95 (264)
282 COG2519 GCD14 tRNA(1-methylade 95.5 0.22 4.7E-06 44.3 11.1 103 194-302 87-196 (256)
283 PRK08594 enoyl-(acyl carrier p 95.5 0.24 5.3E-06 44.7 12.1 77 201-278 6-96 (257)
284 PLN00141 Tic62-NAD(P)-related 95.5 0.22 4.9E-06 44.8 11.8 101 200-303 15-133 (251)
285 PRK06138 short chain dehydroge 95.5 0.1 2.3E-06 46.6 9.7 78 201-279 4-91 (252)
286 PRK06077 fabG 3-ketoacyl-(acyl 95.5 0.32 6.9E-06 43.5 12.8 102 201-304 5-143 (252)
287 KOG1014 17 beta-hydroxysteroid 95.5 0.089 1.9E-06 48.0 8.9 79 200-280 47-137 (312)
288 PRK08643 acetoin reductase; Va 95.5 0.11 2.4E-06 46.7 9.8 77 202-279 2-89 (256)
289 COG2230 Cfa Cyclopropane fatty 95.5 0.31 6.7E-06 44.4 12.3 102 192-306 63-181 (283)
290 PRK08317 hypothetical protein; 95.5 0.096 2.1E-06 46.5 9.2 102 193-301 11-124 (241)
291 PRK07402 precorrin-6B methylas 95.5 0.29 6.3E-06 42.3 11.9 103 194-302 33-143 (196)
292 PF00899 ThiF: ThiF family; I 95.5 0.24 5.2E-06 40.0 10.7 99 202-302 2-125 (135)
293 PF02254 TrkA_N: TrkA-N domain 95.5 0.32 7E-06 37.8 11.1 74 205-281 1-74 (116)
294 PRK08226 short chain dehydroge 95.5 0.12 2.5E-06 46.8 9.8 78 201-279 5-92 (263)
295 PRK10538 malonic semialdehyde 95.5 0.1 2.2E-06 46.7 9.4 75 204-279 2-84 (248)
296 PRK07067 sorbitol dehydrogenas 95.4 0.12 2.7E-06 46.5 9.8 78 201-279 5-90 (257)
297 COG0686 Ald Alanine dehydrogen 95.4 0.096 2.1E-06 47.8 8.7 99 201-304 167-271 (371)
298 PRK00258 aroE shikimate 5-dehy 95.4 0.058 1.3E-06 49.6 7.7 95 200-301 121-221 (278)
299 PRK04457 spermidine synthase; 95.4 0.28 6E-06 44.6 12.0 94 200-299 65-175 (262)
300 PF08704 GCD14: tRNA methyltra 95.4 0.067 1.4E-06 48.0 7.7 106 193-302 32-147 (247)
301 PRK05875 short chain dehydroge 95.4 0.12 2.6E-06 47.1 9.8 39 201-240 6-45 (276)
302 PRK07666 fabG 3-ketoacyl-(acyl 95.4 0.14 2.9E-06 45.6 9.9 78 201-279 6-94 (239)
303 PRK05876 short chain dehydroge 95.4 0.11 2.3E-06 47.6 9.4 78 201-279 5-93 (275)
304 PRK07985 oxidoreductase; Provi 95.4 0.34 7.3E-06 44.8 12.8 102 200-303 47-187 (294)
305 PRK07677 short chain dehydroge 95.4 0.12 2.7E-06 46.4 9.6 77 202-279 1-88 (252)
306 PRK06114 short chain dehydroge 95.4 0.14 3E-06 46.1 10.0 78 201-279 7-96 (254)
307 PRK08993 2-deoxy-D-gluconate 3 95.4 0.15 3.2E-06 45.9 10.1 78 201-279 9-95 (253)
308 PRK01683 trans-aconitate 2-met 95.4 0.19 4.1E-06 45.5 10.9 97 195-300 25-129 (258)
309 PRK10258 biotin biosynthesis p 95.4 0.62 1.3E-05 41.9 14.2 95 198-301 39-140 (251)
310 PRK08277 D-mannonate oxidoredu 95.4 0.13 2.7E-06 47.1 9.8 77 201-278 9-96 (278)
311 PF02558 ApbA: Ketopantoate re 95.4 0.024 5.3E-07 46.7 4.6 94 205-302 1-102 (151)
312 COG0569 TrkA K+ transport syst 95.3 0.16 3.5E-06 45.0 10.0 84 204-291 2-87 (225)
313 PRK06720 hypothetical protein; 95.3 0.18 4E-06 42.5 9.9 39 201-240 15-54 (169)
314 PRK06935 2-deoxy-D-gluconate 3 95.3 0.15 3.1E-06 46.1 9.9 78 201-279 14-101 (258)
315 cd01483 E1_enzyme_family Super 95.3 0.26 5.6E-06 40.2 10.5 97 204-302 1-122 (143)
316 PRK08762 molybdopterin biosynt 95.3 0.21 4.7E-06 47.9 11.5 91 201-292 134-248 (376)
317 PRK08415 enoyl-(acyl carrier p 95.3 0.34 7.4E-06 44.3 12.4 101 201-303 4-145 (274)
318 PRK12769 putative oxidoreducta 95.3 0.052 1.1E-06 56.2 7.7 78 200-280 325-423 (654)
319 PRK08220 2,3-dihydroxybenzoate 95.3 0.28 6E-06 43.9 11.6 35 201-236 7-42 (252)
320 TIGR02355 moeB molybdopterin s 95.3 0.22 4.7E-06 44.7 10.6 35 201-235 23-57 (240)
321 PRK00312 pcm protein-L-isoaspa 95.3 0.35 7.5E-06 42.4 11.9 99 193-301 70-175 (212)
322 PRK07454 short chain dehydroge 95.3 0.17 3.7E-06 45.0 10.1 78 201-279 5-93 (241)
323 PRK09242 tropinone reductase; 95.3 0.15 3.3E-06 45.9 9.8 78 201-279 8-98 (257)
324 TIGR00507 aroE shikimate 5-deh 95.3 0.13 2.8E-06 47.0 9.4 94 199-303 114-216 (270)
325 PRK06197 short chain dehydroge 95.2 0.12 2.7E-06 47.9 9.4 39 201-240 15-54 (306)
326 PLN02253 xanthoxin dehydrogena 95.2 0.13 2.8E-06 47.0 9.5 78 201-279 17-104 (280)
327 TIGR03206 benzo_BadH 2-hydroxy 95.2 0.16 3.5E-06 45.4 9.8 76 201-278 2-89 (250)
328 cd01078 NAD_bind_H4MPT_DH NADP 95.2 0.27 5.8E-06 42.4 10.8 76 201-281 27-109 (194)
329 PRK06124 gluconate 5-dehydroge 95.2 0.17 3.7E-06 45.5 10.0 78 201-279 10-98 (256)
330 PRK07856 short chain dehydroge 95.2 0.13 2.8E-06 46.2 9.2 74 201-279 5-85 (252)
331 PRK08085 gluconate 5-dehydroge 95.2 0.17 3.6E-06 45.5 9.9 78 201-279 8-96 (254)
332 PRK05854 short chain dehydroge 95.2 0.14 3.1E-06 47.8 9.6 39 201-240 13-52 (313)
333 PRK12548 shikimate 5-dehydroge 95.2 0.18 3.9E-06 46.6 10.1 37 200-236 124-160 (289)
334 PRK07904 short chain dehydroge 95.2 0.15 3.2E-06 46.1 9.4 80 199-279 5-97 (253)
335 PRK08278 short chain dehydroge 95.2 0.15 3.2E-06 46.6 9.6 36 201-237 5-41 (273)
336 PRK12936 3-ketoacyl-(acyl-carr 95.2 0.18 3.9E-06 44.8 10.0 77 201-279 5-90 (245)
337 PRK05884 short chain dehydroge 95.1 0.1 2.2E-06 46.1 8.2 74 204-278 2-78 (223)
338 PRK07453 protochlorophyllide o 95.1 0.12 2.7E-06 48.4 9.1 77 201-278 5-92 (322)
339 PRK07035 short chain dehydroge 95.1 0.17 3.7E-06 45.3 9.8 78 201-279 7-95 (252)
340 COG0031 CysK Cysteine synthase 95.1 0.64 1.4E-05 42.7 13.2 59 195-254 55-116 (300)
341 PRK05650 short chain dehydroge 95.1 0.15 3.3E-06 46.3 9.5 75 204-279 2-87 (270)
342 PRK06482 short chain dehydroge 95.1 0.17 3.6E-06 46.2 9.7 76 203-279 3-86 (276)
343 PLN03075 nicotianamine synthas 95.1 0.17 3.7E-06 46.5 9.4 96 201-301 123-233 (296)
344 PRK08862 short chain dehydroge 95.1 0.19 4.1E-06 44.6 9.7 77 201-278 4-92 (227)
345 PRK07097 gluconate 5-dehydroge 95.1 0.19 4E-06 45.6 9.8 78 201-279 9-97 (265)
346 PRK07825 short chain dehydroge 95.1 0.16 3.4E-06 46.3 9.4 77 202-279 5-88 (273)
347 PF01408 GFO_IDH_MocA: Oxidore 95.1 0.22 4.8E-06 39.0 9.1 87 204-301 2-92 (120)
348 COG0673 MviM Predicted dehydro 95.0 0.43 9.4E-06 45.0 12.6 130 204-350 5-146 (342)
349 PLN02244 tocopherol O-methyltr 95.0 0.18 3.9E-06 47.8 9.8 94 200-301 117-223 (340)
350 PRK06101 short chain dehydroge 95.0 0.14 3.1E-06 45.6 8.8 43 203-246 2-45 (240)
351 PRK12743 oxidoreductase; Provi 95.0 0.22 4.7E-06 44.9 10.1 77 202-279 2-90 (256)
352 PRK08300 acetaldehyde dehydrog 95.0 0.19 4.1E-06 46.3 9.5 92 203-300 5-100 (302)
353 PRK12475 thiamine/molybdopteri 95.0 0.27 5.9E-06 46.4 10.9 35 201-235 23-57 (338)
354 TIGR02622 CDP_4_6_dhtase CDP-g 95.0 0.14 3E-06 48.6 9.0 78 201-279 3-85 (349)
355 PRK12367 short chain dehydroge 95.0 0.2 4.3E-06 45.1 9.5 73 201-279 13-89 (245)
356 TIGR01470 cysG_Nterm siroheme 95.0 0.49 1.1E-05 41.3 11.7 93 201-302 8-101 (205)
357 PRK07688 thiamine/molybdopteri 94.9 0.26 5.7E-06 46.5 10.6 35 201-235 23-57 (339)
358 PLN02780 ketoreductase/ oxidor 94.9 0.12 2.7E-06 48.4 8.4 77 201-279 52-142 (320)
359 PRK08644 thiamine biosynthesis 94.9 0.26 5.7E-06 43.2 9.9 35 201-235 27-61 (212)
360 PRK08063 enoyl-(acyl carrier p 94.9 0.2 4.4E-06 44.7 9.6 78 201-279 3-92 (250)
361 PRK05690 molybdopterin biosynt 94.9 0.37 8E-06 43.3 11.1 91 201-292 31-145 (245)
362 PRK14903 16S rRNA methyltransf 94.9 0.42 9E-06 46.8 12.3 102 196-303 232-368 (431)
363 PLN02823 spermine synthase 94.9 0.33 7.2E-06 45.7 11.0 98 201-301 103-220 (336)
364 PRK07574 formate dehydrogenase 94.9 0.13 2.9E-06 49.3 8.5 89 201-301 191-284 (385)
365 PF02670 DXP_reductoisom: 1-de 94.9 0.33 7.1E-06 38.8 9.3 95 205-302 1-121 (129)
366 PF03446 NAD_binding_2: NAD bi 94.9 0.16 3.6E-06 42.5 8.2 88 204-303 3-96 (163)
367 PRK04266 fibrillarin; Provisio 94.8 0.39 8.4E-06 42.6 10.9 102 195-300 66-175 (226)
368 PRK08328 hypothetical protein; 94.8 0.36 7.8E-06 43.0 10.7 35 201-235 26-60 (231)
369 PRK05557 fabG 3-ketoacyl-(acyl 94.8 0.25 5.5E-06 43.9 10.0 36 201-237 4-40 (248)
370 cd00757 ThiF_MoeB_HesA_family 94.8 0.37 8E-06 42.8 10.8 101 201-302 20-144 (228)
371 cd01487 E1_ThiF_like E1_ThiF_l 94.8 0.4 8.7E-06 40.6 10.5 33 204-236 1-33 (174)
372 PRK07775 short chain dehydroge 94.8 0.26 5.6E-06 45.0 10.1 77 201-279 9-97 (274)
373 COG0421 SpeE Spermidine syntha 94.8 0.25 5.3E-06 45.3 9.7 97 203-301 78-190 (282)
374 TIGR00563 rsmB ribosomal RNA s 94.8 0.42 9.2E-06 46.8 12.1 103 195-303 232-370 (426)
375 TIGR00477 tehB tellurite resis 94.8 0.15 3.2E-06 44.2 8.0 98 195-301 24-133 (195)
376 PRK08251 short chain dehydroge 94.8 0.24 5.1E-06 44.3 9.7 76 202-278 2-90 (248)
377 PRK06505 enoyl-(acyl carrier p 94.8 0.19 4.2E-06 45.8 9.2 78 201-279 6-95 (271)
378 PLN02476 O-methyltransferase 94.8 0.24 5.2E-06 45.2 9.5 104 195-300 112-227 (278)
379 PRK05717 oxidoreductase; Valid 94.8 0.24 5.1E-06 44.6 9.6 78 201-279 9-94 (255)
380 PRK06079 enoyl-(acyl carrier p 94.7 0.14 3E-06 46.2 8.0 78 201-279 6-93 (252)
381 PRK07791 short chain dehydroge 94.7 0.32 6.8E-06 44.8 10.5 36 200-236 4-40 (286)
382 PRK12938 acetyacetyl-CoA reduc 94.7 0.26 5.6E-06 44.0 9.7 78 201-279 2-91 (246)
383 PRK15469 ghrA bifunctional gly 94.7 0.23 5E-06 46.3 9.6 89 200-302 134-227 (312)
384 PLN02256 arogenate dehydrogena 94.7 0.51 1.1E-05 43.9 11.8 97 193-302 27-128 (304)
385 PF00106 adh_short: short chai 94.7 0.14 3.1E-06 42.5 7.5 77 203-279 1-90 (167)
386 PRK05565 fabG 3-ketoacyl-(acyl 94.7 0.28 6E-06 43.6 9.9 77 202-279 5-93 (247)
387 PRK07792 fabG 3-ketoacyl-(acyl 94.7 0.29 6.2E-06 45.6 10.2 78 201-279 11-99 (306)
388 COG2227 UbiG 2-polyprenyl-3-me 94.7 0.27 5.9E-06 43.3 9.2 93 200-300 58-160 (243)
389 PRK08703 short chain dehydroge 94.7 0.25 5.4E-06 43.9 9.5 40 201-241 5-45 (239)
390 PRK05708 2-dehydropantoate 2-r 94.7 0.38 8.3E-06 44.8 11.0 95 204-302 4-105 (305)
391 PRK03562 glutathione-regulated 94.7 0.25 5.3E-06 50.8 10.5 78 202-282 400-477 (621)
392 PRK12384 sorbitol-6-phosphate 94.7 0.25 5.4E-06 44.5 9.6 38 202-240 2-40 (259)
393 PLN00203 glutamyl-tRNA reducta 94.7 0.13 2.8E-06 51.4 8.1 74 201-281 265-341 (519)
394 cd05211 NAD_bind_Glu_Leu_Phe_V 94.6 0.23 5.1E-06 43.7 8.9 79 200-281 21-109 (217)
395 PRK06484 short chain dehydroge 94.6 0.2 4.4E-06 50.3 9.6 78 201-279 4-89 (520)
396 TIGR00417 speE spermidine synt 94.6 0.5 1.1E-05 43.2 11.3 97 201-301 72-186 (270)
397 PRK07533 enoyl-(acyl carrier p 94.6 0.24 5.2E-06 44.8 9.2 78 201-279 9-98 (258)
398 PRK06483 dihydromonapterin red 94.6 0.22 4.9E-06 44.1 8.9 77 202-279 2-84 (236)
399 PRK14103 trans-aconitate 2-met 94.6 0.49 1.1E-05 42.7 11.2 97 193-300 21-125 (255)
400 PRK10669 putative cation:proto 94.5 0.27 5.8E-06 50.0 10.3 76 203-281 418-493 (558)
401 PRK11579 putative oxidoreducta 94.5 0.52 1.1E-05 44.7 11.7 126 204-349 6-142 (346)
402 PRK08303 short chain dehydroge 94.5 0.29 6.4E-06 45.5 9.8 34 201-235 7-41 (305)
403 PRK07340 ornithine cyclodeamin 94.5 0.17 3.8E-06 47.0 8.2 102 200-313 123-228 (304)
404 KOG4022 Dihydropteridine reduc 94.5 0.45 9.8E-06 39.2 9.4 92 203-302 4-130 (236)
405 PF01370 Epimerase: NAD depend 94.5 0.15 3.3E-06 45.0 7.6 71 205-279 1-75 (236)
406 PRK07424 bifunctional sterol d 94.5 0.3 6.5E-06 47.3 10.0 74 201-279 177-255 (406)
407 TIGR00446 nop2p NOL1/NOP2/sun 94.5 1.2 2.6E-05 40.5 13.4 102 197-303 67-201 (264)
408 PLN02657 3,8-divinyl protochlo 94.5 0.22 4.7E-06 48.2 9.1 78 198-279 56-146 (390)
409 PLN02781 Probable caffeoyl-CoA 94.5 0.38 8.2E-06 42.9 10.0 105 194-300 61-177 (234)
410 KOG0725 Reductases with broad 94.5 0.18 3.9E-06 46.0 8.0 79 200-279 6-99 (270)
411 PRK07024 short chain dehydroge 94.5 0.17 3.6E-06 45.7 7.9 77 202-279 2-88 (257)
412 PRK06113 7-alpha-hydroxysteroi 94.5 0.32 7E-06 43.7 9.7 78 201-279 10-98 (255)
413 PTZ00098 phosphoethanolamine N 94.4 0.36 7.8E-06 43.9 10.0 103 193-302 44-157 (263)
414 PRK06701 short chain dehydroge 94.4 0.34 7.3E-06 44.7 10.0 37 199-236 43-80 (290)
415 TIGR02354 thiF_fam2 thiamine b 94.4 0.52 1.1E-05 40.9 10.4 35 201-235 20-54 (200)
416 PRK07074 short chain dehydroge 94.4 0.3 6.4E-06 43.9 9.4 77 202-279 2-87 (257)
417 PLN03139 formate dehydrogenase 94.4 0.2 4.2E-06 48.1 8.4 90 200-301 197-291 (386)
418 PRK06463 fabG 3-ketoacyl-(acyl 94.4 0.2 4.4E-06 45.0 8.2 78 201-279 6-89 (255)
419 PRK14192 bifunctional 5,10-met 94.4 0.38 8.3E-06 44.1 9.9 77 199-303 156-233 (283)
420 PRK06179 short chain dehydroge 94.4 0.085 1.8E-06 47.9 5.7 75 202-279 4-83 (270)
421 PRK03659 glutathione-regulated 94.4 0.3 6.5E-06 50.0 10.2 94 203-300 401-497 (601)
422 PRK08287 cobalt-precorrin-6Y C 94.3 0.9 2E-05 38.8 11.8 97 195-300 25-130 (187)
423 PRK11036 putative S-adenosyl-L 94.3 0.47 1E-05 42.9 10.4 93 200-300 43-148 (255)
424 PRK06914 short chain dehydroge 94.3 0.33 7.2E-06 44.3 9.6 77 202-279 3-91 (280)
425 PRK12550 shikimate 5-dehydroge 94.3 0.18 4E-06 46.0 7.7 70 198-279 118-188 (272)
426 PRK12747 short chain dehydroge 94.3 0.89 1.9E-05 40.7 12.3 37 201-238 3-41 (252)
427 PF01209 Ubie_methyltran: ubiE 94.3 0.13 2.9E-06 45.8 6.6 105 195-306 41-158 (233)
428 PRK07417 arogenate dehydrogena 94.3 0.3 6.4E-06 44.9 9.1 68 204-281 2-69 (279)
429 PRK12745 3-ketoacyl-(acyl-carr 94.3 0.37 8E-06 43.2 9.7 76 203-279 3-90 (256)
430 PRK05597 molybdopterin biosynt 94.3 0.59 1.3E-05 44.5 11.3 36 201-236 27-62 (355)
431 PRK01438 murD UDP-N-acetylmura 94.3 0.39 8.4E-06 47.8 10.6 71 200-280 14-89 (480)
432 PRK14188 bifunctional 5,10-met 94.2 0.4 8.6E-06 44.2 9.7 93 181-303 137-232 (296)
433 PLN02735 carbamoyl-phosphate s 94.2 0.7 1.5E-05 50.7 13.2 98 185-287 6-116 (1102)
434 PRK07102 short chain dehydroge 94.2 0.32 7E-06 43.3 9.2 38 203-241 2-40 (243)
435 PRK08340 glucose-1-dehydrogena 94.2 0.34 7.4E-06 43.7 9.4 75 204-279 2-86 (259)
436 PRK09135 pteridine reductase; 94.2 0.44 9.6E-06 42.4 10.1 35 201-236 5-40 (249)
437 PLN02653 GDP-mannose 4,6-dehyd 94.2 0.16 3.6E-06 47.9 7.5 75 201-279 5-93 (340)
438 PRK06523 short chain dehydroge 94.2 0.28 6.1E-06 44.1 8.8 72 201-278 8-86 (260)
439 TIGR01472 gmd GDP-mannose 4,6- 94.2 0.23 4.9E-06 47.0 8.4 73 203-279 1-88 (343)
440 PRK05447 1-deoxy-D-xylulose 5- 94.2 0.49 1.1E-05 45.1 10.4 96 203-301 2-121 (385)
441 PRK06398 aldose dehydrogenase; 94.2 0.21 4.6E-06 45.1 7.9 73 201-279 5-82 (258)
442 TIGR00138 gidB 16S rRNA methyl 94.2 0.51 1.1E-05 40.3 9.7 91 201-300 42-141 (181)
443 cd01492 Aos1_SUMO Ubiquitin ac 94.1 0.62 1.3E-05 40.4 10.3 100 201-302 20-143 (197)
444 TIGR01532 E4PD_g-proteo D-eryt 94.1 0.44 9.5E-06 44.7 9.9 94 204-303 1-122 (325)
445 PRK14194 bifunctional 5,10-met 94.1 0.44 9.6E-06 43.9 9.7 94 181-303 138-233 (301)
446 PRK03612 spermidine synthase; 94.1 0.47 1E-05 47.7 10.7 98 200-301 296-415 (521)
447 PRK13255 thiopurine S-methyltr 94.1 0.41 8.9E-06 42.2 9.2 100 198-301 34-155 (218)
448 PRK05600 thiamine biosynthesis 94.1 0.72 1.6E-05 44.2 11.5 35 201-235 40-74 (370)
449 PRK12825 fabG 3-ketoacyl-(acyl 94.0 0.49 1.1E-05 41.9 10.0 34 201-235 5-39 (249)
450 PF01596 Methyltransf_3: O-met 94.0 0.15 3.2E-06 44.5 6.3 103 196-301 40-155 (205)
451 PRK08936 glucose-1-dehydrogena 94.0 0.47 1E-05 42.8 9.9 78 201-279 6-95 (261)
452 PLN02233 ubiquinone biosynthes 94.0 0.67 1.4E-05 42.1 10.8 101 196-303 68-184 (261)
453 PRK12746 short chain dehydroge 94.0 0.4 8.7E-06 43.0 9.3 38 201-239 5-44 (254)
454 PF01118 Semialdhyde_dh: Semia 94.0 0.23 5E-06 39.3 6.8 90 204-302 1-98 (121)
455 TIGR00715 precor6x_red precorr 94.0 0.2 4.3E-06 45.3 7.1 73 204-279 2-75 (256)
456 PRK08223 hypothetical protein; 93.9 0.79 1.7E-05 42.0 11.0 35 201-235 26-60 (287)
457 PRK06603 enoyl-(acyl carrier p 93.9 0.38 8.3E-06 43.5 9.1 78 201-279 7-96 (260)
458 PRK06522 2-dehydropantoate 2-r 93.9 0.4 8.7E-06 44.4 9.4 92 204-302 2-101 (304)
459 PF03807 F420_oxidored: NADP o 93.9 0.32 6.9E-06 36.5 7.2 85 204-300 1-93 (96)
460 PLN02520 bifunctional 3-dehydr 93.9 0.23 5E-06 50.0 8.1 71 201-279 378-449 (529)
461 PF02719 Polysacc_synt_2: Poly 93.9 0.3 6.5E-06 44.8 8.1 76 205-280 1-88 (293)
462 PRK07577 short chain dehydroge 93.9 0.21 4.5E-06 44.2 7.1 72 202-279 3-78 (234)
463 PRK04207 glyceraldehyde-3-phos 93.9 0.77 1.7E-05 43.5 11.2 95 204-302 3-110 (341)
464 PLN02986 cinnamyl-alcohol dehy 93.9 0.41 9E-06 44.7 9.5 75 201-278 4-86 (322)
465 PLN02896 cinnamyl-alcohol dehy 93.8 0.53 1.2E-05 44.7 10.3 78 199-279 7-89 (353)
466 PF05368 NmrA: NmrA-like famil 93.8 0.67 1.5E-05 41.0 10.3 70 205-278 1-73 (233)
467 PRK00121 trmB tRNA (guanine-N( 93.8 1.1 2.3E-05 39.0 11.3 97 201-301 40-156 (202)
468 PRK02472 murD UDP-N-acetylmura 93.8 0.5 1.1E-05 46.5 10.3 72 201-280 4-79 (447)
469 PRK09496 trkA potassium transp 93.8 0.5 1.1E-05 46.5 10.3 75 204-281 2-77 (453)
470 PRK08690 enoyl-(acyl carrier p 93.8 0.43 9.3E-06 43.2 9.1 78 201-279 5-94 (261)
471 PRK13303 L-aspartate dehydroge 93.8 0.55 1.2E-05 42.8 9.7 87 204-300 3-91 (265)
472 TIGR02415 23BDH acetoin reduct 93.8 0.54 1.2E-05 42.1 9.7 75 204-279 2-87 (254)
473 PRK10206 putative oxidoreducta 93.7 0.46 9.9E-06 45.1 9.4 128 204-349 3-142 (344)
474 PRK14027 quinate/shikimate deh 93.7 0.25 5.5E-06 45.4 7.4 44 200-243 125-168 (283)
475 PRK08416 7-alpha-hydroxysteroi 93.7 0.6 1.3E-05 42.1 9.9 77 201-278 7-96 (260)
476 PRK10792 bifunctional 5,10-met 93.6 0.56 1.2E-05 42.9 9.4 94 181-303 138-233 (285)
477 TIGR01963 PHB_DH 3-hydroxybuty 93.6 0.61 1.3E-05 41.7 9.8 76 203-279 2-88 (255)
478 PRK12827 short chain dehydroge 93.6 0.63 1.4E-05 41.4 9.8 33 201-234 5-38 (249)
479 PF13823 ADH_N_assoc: Alcohol 93.6 0.071 1.5E-06 28.6 2.1 22 17-39 1-22 (23)
480 TIGR02752 MenG_heptapren 2-hep 93.6 0.32 6.9E-06 43.1 7.7 101 195-302 39-152 (231)
481 PF08241 Methyltransf_11: Meth 93.6 0.12 2.5E-06 38.3 4.2 84 208-299 3-95 (95)
482 PRK09134 short chain dehydroge 93.5 0.6 1.3E-05 42.0 9.7 78 201-279 8-97 (258)
483 TIGR01505 tartro_sem_red 2-hyd 93.5 0.34 7.3E-06 44.8 8.1 72 204-286 1-72 (291)
484 smart00846 Gp_dh_N Glyceraldeh 93.5 0.95 2.1E-05 37.3 9.9 98 204-303 2-120 (149)
485 PRK14901 16S rRNA methyltransf 93.5 0.91 2E-05 44.5 11.5 103 196-301 247-384 (434)
486 PRK12744 short chain dehydroge 93.5 0.58 1.3E-05 42.1 9.4 32 201-233 7-39 (257)
487 PRK05855 short chain dehydroge 93.5 0.47 1E-05 48.1 9.8 78 201-279 314-402 (582)
488 PLN02928 oxidoreductase family 93.5 0.52 1.1E-05 44.7 9.3 97 200-302 157-263 (347)
489 PRK14618 NAD(P)H-dependent gly 93.4 0.98 2.1E-05 42.5 11.2 89 204-302 6-105 (328)
490 TIGR00452 methyltransferase, p 93.4 1.2 2.5E-05 41.7 11.3 98 193-300 113-224 (314)
491 PF02737 3HCDH_N: 3-hydroxyacy 93.4 0.92 2E-05 38.7 9.9 39 204-243 1-39 (180)
492 PRK11559 garR tartronate semia 93.4 0.43 9.2E-06 44.2 8.6 72 204-286 4-75 (296)
493 PRK13243 glyoxylate reductase; 93.4 0.36 7.8E-06 45.6 8.1 87 201-301 149-240 (333)
494 cd05191 NAD_bind_amino_acid_DH 93.4 0.87 1.9E-05 33.5 8.6 35 200-234 21-55 (86)
495 PRK07370 enoyl-(acyl carrier p 93.4 0.51 1.1E-05 42.7 8.9 101 201-303 5-149 (258)
496 PLN02589 caffeoyl-CoA O-methyl 93.4 0.68 1.5E-05 41.6 9.4 101 196-299 74-188 (247)
497 PRK09496 trkA potassium transp 93.3 0.87 1.9E-05 44.8 11.2 80 200-281 229-309 (453)
498 PRK06141 ornithine cyclodeamin 93.3 0.57 1.2E-05 43.8 9.3 93 200-302 123-220 (314)
499 PRK07889 enoyl-(acyl carrier p 93.3 0.59 1.3E-05 42.2 9.2 78 201-279 6-95 (256)
500 PRK08159 enoyl-(acyl carrier p 93.3 0.62 1.3E-05 42.5 9.4 79 199-278 7-97 (272)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=5.1e-67 Score=476.55 Aligned_cols=336 Identities=29% Similarity=0.465 Sum_probs=307.2
Q ss_pred CeeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 14 PIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 14 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
+++|||+++.++++|+++.+++.|+|+++||+|+|+|+|+|++|++.++|.++...+|++||||.+|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 36799999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCCEEEe-cCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 94 EGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 94 ~GdrV~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
+||||.+ ++..+|+.|+||++|++++|+.... +|++.+| +|+||+++++.+++++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCC
Confidence 9999999 9999999999999999999998776 7777777 999999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++++.||.+.|+..|+|.++ +.+++++|++|+|+|.|++|.+++|+||++|+ +|++++++++|++++++||++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999987 55899999999999999999999999999998 9999999999999999999999999
Q ss_pred CCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 253 SKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
.++.+..+.+++. +|+++|+++ +.+++.+++.|+++ |+++++|........+++.+.++.+++++.|+..++.
T Consensus 217 ~~~~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~- 289 (339)
T COG1064 217 SSDSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTR- 289 (339)
T ss_pred cCCchhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCH-
Confidence 8754444434442 999999999 88899999999997 9999999864234456788888999999999987764
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
.++++++++..+|++.+. +.+.++++++++|++.|++++. +|+||++.
T Consensus 290 --~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 290 --ADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred --HHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 799999999999977666 5479999999999999999987 59999875
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=8.8e-66 Score=457.89 Aligned_cols=365 Identities=45% Similarity=0.789 Sum_probs=347.2
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
|++||.+..++++|++++++.+++|++|||+||+.|+|+|++|....+|.++.. +|.++|||++|+|++||++|+.++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 458899999999999999999999999999999999999999999999998877 9999999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|+..++.+|+.|.+|+++.+|+|......+..|...+|..|++ .++...++++|.++|++|.++++..+++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCC
Confidence 9999999999999999999999999998887778899999999988 888999999999999999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
+++.++++.|...|.+.+..+.+++++|++|.|+|.|++|++++|-|+..|+++||+++.+++|++++++||+++++|++
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC-CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 255 NC-GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 255 ~~-~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
+. +..+.+..++++|+|++|||+|....+++++.+..++ |+.+.+|.......+++++.++... .++.|+.++.-..
T Consensus 239 ~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p 316 (366)
T COG1062 239 EVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARP 316 (366)
T ss_pred hhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCcc
Confidence 85 3555588899889999999999999999999999995 9999999988788888898888885 9999999998888
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
+.++.+++++..+|++++++++++.++|+|++|||+.|.+++..|.||.+
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 89999999999999999999999999999999999999999999998865
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-63 Score=437.04 Aligned_cols=370 Identities=55% Similarity=0.982 Sum_probs=349.6
Q ss_pred CCCeeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCC
Q 016660 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (385)
Q Consensus 12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (385)
.+..+|||.+..++++||.++++.+++|+.+||+||++++++|++|...+.|..+...+|+++|||.+|+|+++|++|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 45688999999999999999999999999999999999999999999999999877889999999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCC-CCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEEC
Q 016660 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (385)
Q Consensus 92 ~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~-~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i 170 (385)
|++||+|+..+...|+.|.+|+++..|+|......+ ..++..+|..|++ .+|+..|+|++..+|+||.+++...+.+|
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~kI 161 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAKI 161 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEec
Confidence 999999999999999999999999999999999864 4455569999999 88999999999999999999999999999
Q ss_pred CCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE
Q 016660 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (385)
Q Consensus 171 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 250 (385)
++..+++.+++|.|...|+|.|+++.+++++|+++.|+|-|++|+++++-||+.|+.+||++|.+++|.+.+++||+++.
T Consensus 162 d~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~ 241 (375)
T KOG0022|consen 162 DPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEF 241 (375)
T ss_pred CCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCC--chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeee
Q 016660 251 VNSKNCG--DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 328 (385)
Q Consensus 251 v~~~~~~--~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 328 (385)
+|+.+.. ..+.+++.|++|+|+-|||+|...++.+++.+..++||+-|.+|.......+++.++.++. +.++.|+.+
T Consensus 242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~-GR~~~Gs~F 320 (375)
T KOG0022|consen 242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVT-GRTWKGSAF 320 (375)
T ss_pred cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhcc-ccEEEEEec
Confidence 9998532 2334889999999999999999999999999999999999999998888888899888777 899999999
Q ss_pred cCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 329 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
+.+..+.++..+++...++++.++.+|+|..||+++++||+.|.+++..|.|+.+
T Consensus 321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred ccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-60 Score=419.77 Aligned_cols=340 Identities=26% Similarity=0.455 Sum_probs=301.0
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCC---CCCCccccCceeEEEEEeCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVD 90 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~ 90 (385)
.+|+|+++.++++ +++.+.|.|++ .|+||+|++.++|||++|+|.+...... .+.|+++|||.+|+|.++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4589999999998 99999999987 9999999999999999999999765533 34799999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCceeeccccccceeeeEeeccCceEE
Q 016660 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (385)
Q Consensus 91 ~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~ 169 (385)
++++||||++.|..+|+.|++|++|++|+|+.-.| .+. ..+| ++++|++.+++++++
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G-------------------~la~y~~~~~dfc~K 139 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG-------------------TLAEYYVHPADFCYK 139 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCcccc---ccCCCcCC-------------------ceEEEEEechHheee
Confidence 99999999999999999999999999999988776 222 2344 999999999999999
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe
Q 016660 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (385)
Q Consensus 170 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 249 (385)
+|+++|++++|++. +++++|+|. +++++++|++|||+|+|++|+++...||++|+.+|++++..+.|++++++||++.
T Consensus 140 LPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~ 217 (354)
T KOG0024|consen 140 LPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV 217 (354)
T ss_pred CCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence 99999999999998 699999976 7789999999999999999999999999999999999999999999999999998
Q ss_pred EEeCCCCCchhHHHHhh----CC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEE
Q 016660 250 FVNSKNCGDKSIIIDMT----DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 324 (385)
Q Consensus 250 vv~~~~~~~~~~i~~~~----~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 324 (385)
+.+.......+.+++.. +. .+|++|||+|...+++.++..++.+ |.+++.|+- ....+++...+..|++.+.
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLR 294 (354)
T ss_pred EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeee
Confidence 87766644233333332 22 4999999999999999999999997 999888863 5678888888889999999
Q ss_pred EeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEEeCC
Q 016660 325 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWMGE 385 (385)
Q Consensus 325 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~--~k~vi~~~~ 385 (385)
|++.. .+.++..+++++++|++.+++++++.|+++++.+||+.+.++.. .|++|..++
T Consensus 295 g~fry---~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 295 GSFRY---CNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eeeee---ccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 98522 13589999999999999999999999999999999999998874 499998764
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-58 Score=406.93 Aligned_cols=347 Identities=26% Similarity=0.382 Sum_probs=303.3
Q ss_pred CCCCCeeeeEEEeccCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCC
Q 016660 10 TAGKPIQCRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGE 87 (385)
Q Consensus 10 ~~~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~ 87 (385)
++..|.++++|+++.++. ++++.++++|+|+++||+|+|+|+|||++|++.++|.|+...+|.++|||++|+|+++|+
T Consensus 3 ~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs 82 (360)
T KOG0023|consen 3 SMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGS 82 (360)
T ss_pred cccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECC
Confidence 345678899999999998 577799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCEEE-ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCc
Q 016660 88 NVDGVVEGDVVI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH 166 (385)
Q Consensus 88 ~v~~~~~GdrV~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~ 166 (385)
+|++|++||||- -....+|+.|+||..+++++|...-+ ...|+..+| ...+|+||+|+++++.+
T Consensus 83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~~~DG--------------t~~~ggf~~~~~v~~~~ 147 (360)
T KOG0023|consen 83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGVYHDG--------------TITQGGFQEYAVVDEVF 147 (360)
T ss_pred CcccccccCeeeeeEEeccccCccccccCCcccCCceeE-eccccccCC--------------CCccCccceeEEEeeee
Confidence 999999999994 45578899999999999999994222 236777777 55667999999999999
Q ss_pred eEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHHc
Q 016660 167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRF 245 (385)
Q Consensus 167 ~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-~~~~~~~~l 245 (385)
+++||++++.+.||.|.|+..|+|.+| ...++.+|++|-|.|+|++|.+++|+||++|. +|+++++++ +|.+.++.|
T Consensus 148 a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~L 225 (360)
T KOG0023|consen 148 AIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSL 225 (360)
T ss_pred EEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhc
Confidence 999999999999999999999999977 55688899999999997799999999999999 899998887 677778889
Q ss_pred CCCeEEeCCC-CCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEE
Q 016660 246 GVTEFVNSKN-CGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 324 (385)
Q Consensus 246 g~~~vv~~~~-~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 324 (385)
|++..++..+ .+..+.+...+++++|-|.+. ....++.++.+++.+ |++|++|... .++.++.+.++.+.+.|.
T Consensus 226 GAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~--~~~~~~~~~lil~~~~I~ 300 (360)
T KOG0023|consen 226 GADVFVDSTEDPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPE--KPLKLDTFPLILGRKSIK 300 (360)
T ss_pred CcceeEEecCCHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcC--CcccccchhhhcccEEEE
Confidence 9999988874 344444666666667777666 666689999999997 9999999854 378888888999999999
Q ss_pred EeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 325 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 325 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
|+.+++. .+.++++++.+++.+.+. + +..+++++++||+.|+++.. +|.||+++
T Consensus 301 GS~vG~~---ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 301 GSIVGSR---KETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred eeccccH---HHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 9988775 799999999999977665 4 88999999999999999987 59999874
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=4.9e-55 Score=419.93 Aligned_cols=371 Identities=50% Similarity=0.913 Sum_probs=303.7
Q ss_pred CCCeeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCC
Q 016660 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (385)
Q Consensus 12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 90 (385)
.++++|||+++.++++++.+.++|.|+|.++||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+|+++|++++
T Consensus 6 ~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~ 85 (381)
T PLN02740 6 GKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVE 85 (381)
T ss_pred ccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCC
Confidence 45688999999999877899999999999999999999999999999999887532 35789999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCC-CCCCCCccccccc-CCceeeccccccceeeeEeeccCceE
Q 016660 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP-WMPRDQTSRFKDL-RGETIHHFVSVSSFSEYTVLDIAHVV 168 (385)
Q Consensus 91 ~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~-g~~~~g~~~~~~~-~~~~~~~~~~~g~~~~~v~v~~~~~~ 168 (385)
+|++||||++.+..+|+.|.+|.++.+++|.+....... .....|..+++.. .+....++...|+|+||++++.+.++
T Consensus 86 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~ 165 (381)
T PLN02740 86 DLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV 165 (381)
T ss_pred cCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence 999999999999999999999999999999875421000 0000010000000 00000111224699999999999999
Q ss_pred ECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC
Q 016660 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (385)
Q Consensus 169 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 248 (385)
++|+++++++++++++++.|||+++.+.++++++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 245 (381)
T PLN02740 166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGIT 245 (381)
T ss_pred ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCc
Confidence 99999999999999999999999887888999999999999999999999999999996799999999999999999999
Q ss_pred eEEeCCCCC--chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEe
Q 016660 249 EFVNSKNCG--DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 326 (385)
Q Consensus 249 ~vv~~~~~~--~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 326 (385)
+++++++.. +...+.+++++++|++||++|.+.++..++.++++++|+++.+|.......++++...++ +++++.|+
T Consensus 246 ~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~ 324 (381)
T PLN02740 246 DFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELF-DGRSITGS 324 (381)
T ss_pred EEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHh-cCCeEEEE
Confidence 999877632 334466776668999999999988899999999883399999997643323445444443 68899998
Q ss_pred eecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 327 LFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
..+.+....++.++++++.++.+++.++++++|+|+++++|++.+.+++..|++|++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred ecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 766554445788999999999998888899999999999999999888878999874
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.2e-54 Score=416.08 Aligned_cols=362 Identities=37% Similarity=0.626 Sum_probs=302.9
Q ss_pred eeEEEeccCCC--------CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCC
Q 016660 17 CRAAIATAPGE--------PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGEN 88 (385)
Q Consensus 17 ~~a~~~~~~~~--------~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~ 88 (385)
|||+++.+++. .+++.++|.|+|+++||+|||.+++||++|++.+.|.++ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 78999988653 389999999999999999999999999999999988754 356899999999999999999
Q ss_pred CCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceE
Q 016660 89 VDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVV 168 (385)
Q Consensus 89 v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~ 168 (385)
+++|++||||++.+..+|+.|.+|+++++++|.........|...+|..+... ++..+.+..+.|+|+||+.++++.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~-~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRL-RGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccc-cCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999765432222322222111000 00001111223699999999999999
Q ss_pred ECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC
Q 016660 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (385)
Q Consensus 169 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 248 (385)
++|+++++++|+++++++.|||+++.+..+++++++|||.|+|++|++++|+||.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999887888899999999999999999999999999996799999999999999999999
Q ss_pred eEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeee
Q 016660 249 EFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 328 (385)
Q Consensus 249 ~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 328 (385)
+++++.+.+..+.+++++++++|++||++|....+..++++++++ |+++.+|........+++...++.+++++.|++.
T Consensus 239 ~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~ 317 (371)
T cd08281 239 ATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM 317 (371)
T ss_pred eEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence 999988755555577777668999999999888899999999997 9999999754333456777788889999999976
Q ss_pred cCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 016660 329 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 381 (385)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi 381 (385)
..+..++++.++++++++|++++.+++++.|+|+++++||+.+.+++..|.||
T Consensus 318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 65444567899999999999998889999999999999999999888764443
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.7e-54 Score=414.26 Aligned_cols=365 Identities=46% Similarity=0.834 Sum_probs=300.4
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++..++++++++++|.|+|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 78999988887799999999999999999999999999999999988765556799999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
||++.+..+|+.|.+|+.+.+++|.........|...+|..++. .+|..+++..+.|+|+||++++++.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 99999999999999999999999986432112233333321111 01111122223469999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
+++|++++++.|||+++.+..+++++++|||+|+|++|++++|+||.+|+++|++++.+++|+++++++|+++++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999988778899999999999999999999999999999779999999999999999999999987642
Q ss_pred --CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCC
Q 016660 257 --GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK 334 (385)
Q Consensus 257 --~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 334 (385)
.....+++++++++|++||++|++.++..+++++++++|+++.+|.......+++....++. +..+.|+.......+
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~ 319 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKGR 319 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCcH
Confidence 22334667776689999999999887999999998733999999975433334455555443 455777654433334
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 335 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 335 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
.++.++++++++|++++++++++.|+|+++++|++.+.+++..|++|.+
T Consensus 320 ~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 320 TELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 5789999999999998888999999999999999999887777999875
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.3e-54 Score=414.07 Aligned_cols=355 Identities=34% Similarity=0.577 Sum_probs=303.2
Q ss_pred eeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
||||+++.+++++++++++|.|+|.++||+|||.++++|++|++.++|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 599999999998899999999999999999999999999999999888653 3468899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCC-CCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFK-ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~-~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
|||++.+..+|+.|.+|+++++++|...... ...+.. +| .......+.|+|+||+.++++.++++|+++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~-~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~ 149 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLT-DG---------TELSPALGIGAFAEKTLVHAGQCTKVDPAA 149 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCccccccccccc-cC---------cccccccccccccceEEEehhheEECCCCC
Confidence 9999999999999999999999999642210 000000 01 000001124699999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
++++|+++++.+.|+|+++.+..+++++++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|++++++++
T Consensus 150 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~ 229 (358)
T TIGR03451 150 DPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS 229 (358)
T ss_pred ChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC
Confidence 99999999999999998887778899999999999999999999999999996799999999999999999999999987
Q ss_pred CCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 255 NCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 255 ~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
+.+....+.+.+++ ++|++||++|++.++..++++++++ |+++.+|........++++..++.+++++.+++......
T Consensus 230 ~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 308 (358)
T TIGR03451 230 GTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLP 308 (358)
T ss_pred CcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCc
Confidence 75555667788877 8999999999987799999999997 999999975433345677777888899999886543333
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEE
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 382 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~ 382 (385)
.+++.++++++++|++++.+++++.|+|+++.+|++.+++++..|++|.
T Consensus 309 ~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 309 ERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred HHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 5678899999999999988899999999999999999988887788875
No 10
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7e-54 Score=410.68 Aligned_cols=366 Identities=53% Similarity=0.980 Sum_probs=303.8
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
|+|||+++..++++++++++|+|+|+++||+|||.+++||++|++.++|..+...+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 47999999988888999999999999999999999999999999999887655567899999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCC-cccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQ-TSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g-~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
||||++.+..+|+.|.+|+++.+++|.........|....+ -.++. ..|...+++...|+|+||+.++++.++++|++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 99999999999999999999999999875432111221110 00000 00111111223469999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++++++++++.+.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~ 239 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNP 239 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcc
Confidence 99999999999999999988788899999999999999999999999999998779999999999999999999999987
Q ss_pred CCC--CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 254 KNC--GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 254 ~~~--~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
.+. .....+++++++++|++||++|....+..+++++++++|+++.+|.......++++...++ +++++.|++...+
T Consensus 240 ~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~ 318 (369)
T cd08301 240 KDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFGGY 318 (369)
T ss_pred cccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecCCC
Confidence 752 2333466666668999999999988789999999992289999998643334555554444 6899999877666
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEE
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 382 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~ 382 (385)
..+.+++++++++.++.+++.+++++.|+|+++++||+.+++++..|++|.
T Consensus 319 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 319 KPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred ChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 555678999999999999888889999999999999999999888898873
No 11
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.4e-53 Score=408.31 Aligned_cols=365 Identities=45% Similarity=0.862 Sum_probs=301.7
Q ss_pred eeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
+|||+++..+++++++.+.|.|.|.++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 58999988887779999999999999999999999999999999998876555679999999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
|||++.+..+|+.|.+|++++++.|.......+.|...+|..++. .+|...++..+.|+|+||+.++++.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFS-CKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccc-cCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 999999999999999999999999976432111233222211110 1121122223456999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
+++|+++++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998877788999999999999999999999999999977999999999999999999999999876
Q ss_pred CC--chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 256 CG--DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 256 ~~--~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
.+ ....+.+++++++|+|||++|+...+..+++++++++|+++.+|.......+.++...+.. +..+.++..+.+..
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~ 319 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVT-GRVWKGTAFGGWKS 319 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhh-cCeEEEEEecccCc
Confidence 42 3344677776689999999998877999999998733999999975322334444444443 45777776665555
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEE
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 382 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~ 382 (385)
.+++.++++++++|++++.++++++|+|+++++||+.+.+++..|++|+
T Consensus 320 ~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 320 RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 6788999999999999988899999999999999999988877798874
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=8.8e-53 Score=398.75 Aligned_cols=336 Identities=27% Similarity=0.426 Sum_probs=292.9
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++. ++++++|.|+|.++||+|||.++++|++|++.+.+.+.. ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 68999998875 999999999999999999999999999999988766432 2357899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
|||++.+..+|+.|++|+++++++|..... .+|...+| +|+||+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999976542 23433344 999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
+++|+++++++.|||+++ ....++++++|||+|+|++|++++|+|+.+|+++|++++++++|.++++++|+++++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999987 5678899999999999999999999999999955999999999999999999999999877
Q ss_pred CCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCccccc-HHHHhhcCcEEEEeeecCCCC
Q 016660 256 CGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS-SFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 256 ~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~~~ 333 (385)
.. ...+.+++++ ++|++||++|+...+..++++++++ |+++.+|... .. .++ ...++.+++++.|++...
T Consensus 218 ~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~--~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG-EL--TIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC-Cc--ccCcHHHHHhCCCEEEEEecCC---
Confidence 54 4457777777 8999999999998778999999997 9999999753 22 233 245677899999986543
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
.+++.++++++.+|.+.+.+++++.|+|+++++||+.++++..+|+||++
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 35799999999999998888999999999999999999887767999864
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.1e-52 Score=402.79 Aligned_cols=363 Identities=50% Similarity=0.926 Sum_probs=297.1
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
..|||+++.++++.+++.++|.|.|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 569999999988669999999999999999999999999999999887642 45889999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
||||++.+..+|+.|.+|+++.+++|...... ..|... ++..++. ..|.....+...|+|+||+.++++.++++|++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~ 165 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPL 165 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCcccccccccccceeeEEechhheEECCCC
Confidence 99999999999999999999999999763210 001000 0000000 00000000012369999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++++++.+++++.++|++++...+++++++|||+|+|++|++++|+|+.+|++.|++++.+++|.++++++|+++++++
T Consensus 166 l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~ 245 (378)
T PLN02827 166 APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245 (378)
T ss_pred CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence 99999999998999999877777889999999999999999999999999999678889889999999999999999988
Q ss_pred CCC--CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccH-HHHhhcCcEEEEeeecC
Q 016660 254 KNC--GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS-FEVLHSGKILMGSLFGG 330 (385)
Q Consensus 254 ~~~--~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~i~g~~~~~ 330 (385)
++. .....+++++++++|+|||++|....+..+++++++++|+++.+|..... ..++. ..++.+++++.|+....
T Consensus 246 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
T PLN02827 246 NDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTLKGSLFGG 323 (378)
T ss_pred cccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceEEeeecCC
Confidence 752 33344667776689999999999877899999999933999999975432 33333 35677899999987655
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEeC
Q 016660 331 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 384 (385)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~~ 384 (385)
+....++.++++++++|++++.+++++.|+|+++.+|++.+++++..|+||.+.
T Consensus 324 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 324 WKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred CchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 544457889999999999998888999999999999999999888889999875
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=6.5e-52 Score=396.31 Aligned_cols=363 Identities=48% Similarity=0.912 Sum_probs=302.3
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
|.|||+++.+++++++++++|.|.|.++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 3589999998887799999999999999999999999999999999988654 457899999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||||++.+..+|+.|.+|.++.+++|...... ..|...++..+.. .+|...+.+.+.|+|+||+.++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFT-CKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCccccc-cCCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999999999999999999999999875432 1233332211111 011111122235699999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
++++++++++++.|||+++.+..+++++++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++.
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999887788899999999999999999999999999997799999999999999999999999877
Q ss_pred CCC--chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 255 NCG--DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 255 ~~~--~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
+.. ....+++++++++|++||++|+...+..+++++++++|+++.+|... ....+++...++. ++++.|++.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~-~~~i~g~~~~~~~ 315 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLIL-GRTWKGSFFGGFK 315 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhh-CCEEEeeecCCCC
Confidence 632 23446666666899999999988778999999987339999999753 2334556656664 8899998776654
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEE
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 382 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~ 382 (385)
.+.++.+++++++++.+++++++++.|+|+++++||+.+++++..|++|.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 316 SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 45678999999999999998999999999999999999988876788873
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=6e-52 Score=393.37 Aligned_cols=337 Identities=19% Similarity=0.293 Sum_probs=281.1
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccc-cCCC--CCCCCccccCceeEEEEEeCCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDF--PAVFPRILGHEAIGVVESVGENVDG 91 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (385)
..+||+++.+++. +++++.|.| ++++||||||.++|||++|+++++ |... ...+|.++|||++|+|+++ ++++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 4588999999988 999999987 589999999999999999999875 3322 2357999999999999999 7889
Q ss_pred CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECC
Q 016660 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (385)
Q Consensus 92 ~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP 171 (385)
|++||||++.+..+|+.|.+|+++++++|..... +|..... ....|+|+||++++++.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999986443 2211000 0012499999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 172 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
+++++++++. ..++.|||+++. .....++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|+++++
T Consensus 142 ~~l~~~~aa~-~~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAF-AEPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHh-hcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 9999876664 447789999774 45666899999999999999999999999997799999999999999999999999
Q ss_pred eCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 252 NSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
++++.+... +.. ..+++|+|||++|++.+++.++++++++ |+++.+|... ...+++...++.+++++.|+...
T Consensus 220 ~~~~~~~~~-~~~-~~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~g~~~~-- 292 (343)
T PRK09880 220 NPQNDDLDH-YKA-EKGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGG--APPEFPMMTLIVKEISLKGSFRF-- 292 (343)
T ss_pred cCCcccHHH-Hhc-cCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCC--CCCccCHHHHHhCCcEEEEEeec--
Confidence 987744322 222 1236999999999987799999999997 9999999753 33466777788899999998532
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.+++.++++++++|++++.++++++|+|+++++|++.+++++. +|++|.+
T Consensus 293 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 --TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred --cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3679999999999999988899999999999999999988764 6999864
No 16
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.2e-51 Score=389.90 Aligned_cols=342 Identities=28% Similarity=0.390 Sum_probs=280.9
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCc-cccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPR-ILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|+++++..++...++.+.+.|.+.+++|+|||.++|||++|++.+++..+....|. ++|||++|+|+++| .++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 56667776665344777777778999999999999999999999999866555555 99999999999999 77789999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCC--CCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEE-CCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI--SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK-VDP 172 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~--~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~-iP~ 172 (385)
|||++.|..+|+.|.+|+++.+++|.+.++.+ ..+...+| +|+||+.+|.+++++ +|+
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G-------------------~~aEyv~vp~~~~~~~~pd 140 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG-------------------GFAEYVRVPADFNLAKLPD 140 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC-------------------ceEEEEEeccccCeecCCC
Confidence 99999999999999999999999999555421 11111334 999999999765555 588
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCeEE
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFV 251 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vv 251 (385)
++ ..+++++..++.++|++........++++|+|+|+|++|++++++|+..|+++||+++.+++|++++++ +|++.++
T Consensus 141 ~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~ 219 (350)
T COG1063 141 GI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV 219 (350)
T ss_pred CC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEee
Confidence 88 555555655999997763445555666699999999999999999999999999999999999999999 6667676
Q ss_pred eCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecC
Q 016660 252 NSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 330 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 330 (385)
+..+......+.+.++| ++|++|||+|...++++++++++++ |+++.+|....... .++...++.|++++.|++..
T Consensus 220 ~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~- 296 (350)
T COG1063 220 NPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP- 296 (350)
T ss_pred cCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC-
Confidence 66554334447788888 9999999999999999999999997 99999998754432 66677888999999999432
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC--eeEEEEEe
Q 016660 331 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVIWM 383 (385)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~--~~k~vi~~ 383 (385)
..+.+++.+++++++|++++.+++++.++++++++||+.+.++. ..|++|.+
T Consensus 297 -~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 297 -SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred -CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 22368999999999999999999999999999999999998755 34998863
No 17
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=3.1e-51 Score=393.45 Aligned_cols=346 Identities=23% Similarity=0.295 Sum_probs=277.2
Q ss_pred eeEEEeccCCCCcEEEEeecCCCC-------CCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPN-------SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~-------~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (385)
|||+++.+++. ++++++|.|+|+ +|||||||.++|||++|+++++|.++ ..+|.++|||++|+|+++|++|
T Consensus 3 mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 3 NRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred ceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcc
Confidence 89999999986 999999999874 68999999999999999999988653 3468999999999999999999
Q ss_pred CCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCcccccccCCceeeccccccceeeeEeeccC-
Q 016660 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA- 165 (385)
Q Consensus 90 ~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~---~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~- 165 (385)
++|++||||++.+..+|+.|.+|+++++++|...... ..+|+...| .-.|+|+||+.+++.
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG---------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC---------------CCCCceEEEEEechhh
Confidence 9999999999999999999999999999999864310 011221000 002499999999964
Q ss_pred -ceEECCCCCCc----ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 016660 166 -HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (385)
Q Consensus 166 -~~~~iP~~l~~----~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~ 240 (385)
.++++|++++. ..++++.+++.|+|+++ ...+++++++|||.|+|++|++++|+|+.+|++.|++++.+++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998754 34677888899999976 4578999999999989999999999999999966777778888999
Q ss_pred HHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCCh--------------HHHHHHHHHhccCCceEEEeccCCC
Q 016660 241 IGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLA--------------SLVQEAYACCRKGWGKTIVLGVDQP 305 (385)
Q Consensus 241 ~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~~~ 305 (385)
+++++|++.+...++.+....+.+++++ ++|++||++|.+ .++++++++++++ |+++.+|....
T Consensus 225 ~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~ 303 (393)
T TIGR02819 225 QARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVT 303 (393)
T ss_pred HHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCC
Confidence 9999999754333333344446777776 899999999986 3699999999997 99999998531
Q ss_pred CC-----------cccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCcee-eeeecchHHHHHHHHhc
Q 016660 306 GS-----------QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLLIK 373 (385)
Q Consensus 306 ~~-----------~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~-~~~~l~~~~~a~~~l~~ 373 (385)
.. .+++....++.+++++.|.. ....+++.++++++++|++++.++++ +.|+|+++++||+.+.+
T Consensus 304 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~ 380 (393)
T TIGR02819 304 EDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDA 380 (393)
T ss_pred cccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhh
Confidence 11 12333445556677777632 11123457899999999999988777 78999999999999988
Q ss_pred CCeeEEEEEeC
Q 016660 374 GKCLRCVIWMG 384 (385)
Q Consensus 374 ~~~~k~vi~~~ 384 (385)
+..+|++|.+.
T Consensus 381 ~~~~Kvvi~~~ 391 (393)
T TIGR02819 381 GAAKKFVIDPH 391 (393)
T ss_pred CCceEEEEeCC
Confidence 87789999863
No 18
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.4e-50 Score=381.83 Aligned_cols=339 Identities=24% Similarity=0.351 Sum_probs=280.3
Q ss_pred CCCeeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCC
Q 016660 12 GKPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (385)
Q Consensus 12 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (385)
.-||.++++.+.+..+.+++.+++.|.|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 34566777777776666999999999999999999999999999999998876644467899999999999999999999
Q ss_pred CCCCCEEEecCC-CCCCCCccccCCCCCCCCCCCCC-CC---CCCCCCCcccccccCCceeeccccccceeeeEeeccCc
Q 016660 92 VVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFK-IS---PWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH 166 (385)
Q Consensus 92 ~~~GdrV~~~~~-~~~~~~~~c~~~~~~~~~~~~~~-~~---~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~ 166 (385)
|++||||++.+. .+|+.|.+|+++.+++|....+. .. .|...+ |+|+||++++++.
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~ 148 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNY-------------------GGYSDMIVVDQHF 148 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCC-------------------CccceEEEEchHH
Confidence 999999986654 57999999999999999865431 00 022223 4999999999999
Q ss_pred eEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHHc
Q 016660 167 VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRF 245 (385)
Q Consensus 167 ~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~-~~~~~~l 245 (385)
++++|+++++++||++++.+.|+|+++.....++++++|||.|+|++|++++|+||.+|+ +|++++.++++ .+.++++
T Consensus 149 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~ 227 (360)
T PLN02586 149 VLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227 (360)
T ss_pred eeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhC
Confidence 999999999999999999999999987666667899999999999999999999999999 67777666554 5567889
Q ss_pred CCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEE
Q 016660 246 GVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 325 (385)
Q Consensus 246 g~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 325 (385)
|+++++++.+. ..+.+.++ ++|+|||++|...+++.++++++++ |+++.+|... ...++++..++.++..+.|
T Consensus 228 Ga~~vi~~~~~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g 300 (360)
T PLN02586 228 GADSFLVSTDP---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRKLVGG 300 (360)
T ss_pred CCcEEEcCCCH---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCeEEEE
Confidence 99999987652 23455443 6999999999887799999999997 9999999753 2356677777778888888
Q ss_pred eeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 326 SLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
+.... .+++.++++++++|++++. + +.|+|+++++||+.+.+++. +|+||.+
T Consensus 301 ~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 301 SDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred cCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 75432 3578999999999988753 4 68999999999999988875 5999876
No 19
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.7e-49 Score=377.36 Aligned_cols=340 Identities=22% Similarity=0.341 Sum_probs=283.9
Q ss_pred eeEEEeccCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++. +++.+.|.|.| .++||+|||.++++|++|++.+.... ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 68999998876 99999999997 58999999999999999997532211 12358899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
|||++.+..+|+.|++|+.+.+++|..... .|....| +|+||+.++++.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999975332 3333333 999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
+++|+++. ++.++|+++ +...++++++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|+++++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99998875 455677764 5678899999999999999999999999999966889999999999999999999999877
Q ss_pred CCchhHHHHhhCC-Ccc-EEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccc-cHHHHhhcCcEEEEeeecCCC
Q 016660 256 CGDKSIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL-SSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 256 ~~~~~~i~~~~~g-~~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~i~g~~~~~~~ 332 (385)
.. ...+.+++.+ ++| ++|||+|...++..++++++++ |+++.+|.......++. ++..++.+++++.|++.....
T Consensus 215 ~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 292 (347)
T PRK10309 215 MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSS 292 (347)
T ss_pred cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccC
Confidence 44 4446777766 888 9999999987799999999997 99999997643222221 223567789999998754221
Q ss_pred --CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 333 --AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 333 --~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
.+++++++++++++|++++++++++.|+|+++++|++.+.+++. +|+++.+.
T Consensus 293 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 293 PWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred CcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 13578899999999999888999999999999999999988775 59999763
No 20
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=5.8e-50 Score=373.56 Aligned_cols=316 Identities=25% Similarity=0.313 Sum_probs=267.7
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++..++.| +++.++|.|.|+++||||||.|+++|+.|..+++|.. +...+|.++|.|++|+|+++|++|++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 688998888866 8899999999999999999999999999999999873 3356899999999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||||+... . .+ . .|+|+||+.++++.++++|++
T Consensus 81 ~GdrV~~~~-~------------------------~~--~-------------------~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-G------------------------VG--R-------------------DGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-C------------------------CC--C-------------------CCcceeEEEecHHHceeCCCC
Confidence 999997542 0 00 1 249999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++++||++++.+.|||+++....+++++++|||+|+ |++|++++|+||++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999999899999999999986 9999999999999998 6666667778778999999999999
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
+++.++.+.+++++++ ++|+|||++|+.. +..++++++++ |+++.+|...+.....++...++.+++.+.|......
T Consensus 194 y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 271 (326)
T COG0604 194 YREEDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR 271 (326)
T ss_pred CCcccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceec
Confidence 9998888889999999 8999999999998 88899999997 9999999865334555667777778888888765433
Q ss_pred ---CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHH--HHhcCCeeEEEEEe
Q 016660 332 ---KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD--LLIKGKCLRCVIWM 383 (385)
Q Consensus 332 ---~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~--~l~~~~~~k~vi~~ 383 (385)
...+.+.++.+++++|.+++ .++++|||++..++.. .++.+..+|+||++
T Consensus 272 ~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 272 DPEALAEALAELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred chHHHHHHHHHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 11345667889999995554 4889999999555444 44423457999874
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=8.2e-49 Score=374.90 Aligned_cols=332 Identities=24% Similarity=0.360 Sum_probs=274.5
Q ss_pred EEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCCEE
Q 016660 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (385)
Q Consensus 19 a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV 98 (385)
+++..+...++++.+++.|.|+++||+|||.+++||++|++.+.|.+....+|.++|||++|+|+++|+++++|++||||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 34444444458888999999999999999999999999999998876434568899999999999999999999999999
Q ss_pred EecCCC-CCCCCccccCCCCCCCCCCCCCC----CCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 99 IPHFLA-DCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 99 ~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
++.+.. +|+.|.+|+++++++|....+.. ..|...+ |+|+||+.++++.++++|++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ 149 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ-------------------GGYSDVIVVDHRFVLSIPDG 149 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC-------------------CccccEEEEchHHeEECCCC
Confidence 877655 69999999999999998754310 0121122 49999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhcc-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHHcCCCeEE
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFV 251 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~-~~~~~~~lg~~~vv 251 (385)
+++++|+++++...|+|+++..... .+++++|+|.|+|++|++++|+||.+|+ +|++++.+++ +.+.++++|+++++
T Consensus 150 ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i 228 (375)
T PLN02178 150 LPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFL 228 (375)
T ss_pred CCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEE
Confidence 9999999999999999987744432 3689999999999999999999999999 6888876654 47888899999999
Q ss_pred eCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 252 NSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
++.+. ..+.+.++ ++|+|||++|.+.++..++++++++ |+++.+|... ...+++...++.+++++.|+....
T Consensus 229 ~~~~~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~- 300 (375)
T PLN02178 229 VTTDS---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQIGG- 300 (375)
T ss_pred cCcCH---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCccC-
Confidence 87651 33555543 7999999999987789999999997 9999999753 335667777888999999986543
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.+++.++++++++|++++. + +.|+|+++++||+.+.+++. +|+|+.+
T Consensus 301 --~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 301 --MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred --HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 2578999999999987654 5 67999999999999988876 5999976
No 22
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1e-48 Score=372.14 Aligned_cols=332 Identities=24% Similarity=0.396 Sum_probs=282.2
Q ss_pred EEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCccccCceeEEEEEeCCCCCCCCCCCEE
Q 016660 20 AIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVVEGDVV 98 (385)
Q Consensus 20 ~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV 98 (385)
+++.++++++++++.|.|.|+++||+|||.++++|++|++.+.+.+ ....+|.++|||++|+|+++|++++.+ +||||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4567777778999999999999999999999999999999874432 234568999999999999999999887 99999
Q ss_pred EecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC------
Q 016660 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP------ 172 (385)
Q Consensus 99 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~------ 172 (385)
++.+..+|+.|.+|+++++++|..... .|...+| +|+||+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccccc
Confidence 999999999999999999999975433 2333334 999999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++++.++++++++.|+|+++. ...++++++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999999999999999764 5788999999999999999999999999999 7999999999999999999999998
Q ss_pred CCCCC---chhHHHHhhCC-Ccc----EEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEE
Q 016660 253 SKNCG---DKSIIIDMTDG-GAD----YCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 324 (385)
Q Consensus 253 ~~~~~---~~~~i~~~~~g-~~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 324 (385)
+.+.. ....+++++++ ++| +||||+|+..+++.++++++++ |+++.+|.... ...+++..++.+++++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEE
Confidence 77642 22236667776 776 8999999988888999999997 99999997542 24566667777788998
Q ss_pred EeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 325 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 325 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
|++... .+++.++++++++|++++.++++ .|+|+++++||+.+.+++. +|+++++
T Consensus 294 g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 294 GNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEecC
Confidence 886432 35799999999999998887775 7999999999999988875 4888753
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.4e-48 Score=372.16 Aligned_cols=334 Identities=24% Similarity=0.327 Sum_probs=266.2
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC---CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++..++.++++.++|.|+|.++||+|||.|++||++|++.++|.+.. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 588998865544999999999999999999999999999999999887532 246789999999999999999 9999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
+||||++.+..+|+.|.+|+++++++|....+. ..|.. .+ |+|+||++++++.++++|+
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~-------------------G~~aey~~~~~~~~~~~P~ 139 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH-------------------GFMREYFVDDPEYLVKVPP 139 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC-------------------ccceeEEEeccccEEECCC
Confidence 999999999999999999999999999754321 01211 12 4999999999999999999
Q ss_pred CCCcccccccccchhhhhhhhh------hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC---CchHHHHHH
Q 016660 173 TVPPNRACLLSCGVSTGVGAAW------RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGK 243 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~------~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~---~~~~~~~~~ 243 (385)
+++ + ++.+.+++.+++.++. ...+++++++|||+|+|++|++++|+||++|+ +|+++++ +++|+++++
T Consensus 140 ~~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 140 SLA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred CCC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence 998 3 3444445555544322 22236789999999999999999999999999 7888877 688999999
Q ss_pred HcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCccccc----HHHHhhc
Q 016660 244 RFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS----SFEVLHS 319 (385)
Q Consensus 244 ~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~----~~~~~~~ 319 (385)
++|++. +++.+.+..+ . ...+++|+|||++|.+..+..++++++++ |+++.+|........+++ ...++.|
T Consensus 217 ~~Ga~~-v~~~~~~~~~--~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k 291 (355)
T cd08230 217 ELGATY-VNSSKTPVAE--V-KLVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLG 291 (355)
T ss_pred HcCCEE-ecCCccchhh--h-hhcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhc
Confidence 999987 4665533222 1 12237999999999987789999999997 999999986542344444 3456778
Q ss_pred CcEEEEeeecCCCCCCcHHHHHHHHHcCCC----CCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 320 GKILMGSLFGGLKAKSDIPILLKRYMDKEL----ELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 320 ~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
++++.|+.... .+++.++++++.++.+ .++++++++|+|+++.+||+.++++. .|++|++
T Consensus 292 ~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 292 NKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred CcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 99999985332 3678899999988762 35677899999999999999887654 5999864
No 24
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=6.1e-48 Score=368.68 Aligned_cols=347 Identities=29% Similarity=0.414 Sum_probs=294.2
Q ss_pred eEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCC------
Q 016660 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG------ 91 (385)
Q Consensus 18 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~------ 91 (385)
||+++.++++++++.+.|.|.|+++||+|||.++++|++|+....|.++...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998877999999999999999999999999999999998887653457889999999999999999986
Q ss_pred CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC-ceEEC
Q 016660 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA-HVVKV 170 (385)
Q Consensus 92 ~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~i 170 (385)
|++||+|++.+..+|+.|.+|+.+..++|....+ +|...+- + .....|+|++|+.++++ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~--------~----~~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASC--------D----DPHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccc--------c----CCCCCcccceEEEecCCCceEEC
Confidence 9999999999999999999999999999987654 2221100 0 00012499999999986 79999
Q ss_pred CCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE
Q 016660 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (385)
Q Consensus 171 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 250 (385)
|+++++..++++++++.|||+++.+....+++++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999999989999999988666666799999999999999999999999999778999899999999999999999
Q ss_pred EeCCCCCch---hHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEe
Q 016660 251 VNSKNCGDK---SIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 326 (385)
Q Consensus 251 v~~~~~~~~---~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 326 (385)
+++++.... ..+.+.+++ ++|++||++|+...+..++++++++ |+++.+|........+++...++.+++++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 988764433 246777777 8999999999877789999999997 99999997643334556666678889999988
Q ss_pred eecCCCCCCcHHHHHHHHHcC--CCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 327 LFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~g--~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
+... .+++.++++++.++ .+.+.+++++.|+++++++||+.++++..+|++|.+
T Consensus 306 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 306 HNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 6432 36788999999888 666777888999999999999999888777999864
No 25
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=1.5e-47 Score=366.93 Aligned_cols=367 Identities=43% Similarity=0.764 Sum_probs=297.2
Q ss_pred CCeeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCC
Q 016660 13 KPIQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (385)
Q Consensus 13 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (385)
+-.+|||+++..++++++++++|.|+|.++||+|||.++++|++|++.+.|.+. ..+|.++|||++|+|+++|++++.|
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccC
Confidence 345699999988887799999999999999999999999999999999988753 3568899999999999999999999
Q ss_pred CCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 93 ~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
++||+|++.+..+|+.|.+|++++++.|.........|...++..+.+ .+|...+++.+.|+|+||++++++.++++|+
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCcccccccCCCcccceEEecccceeeCCC
Confidence 999999999999999999999999999986543111122211111110 1111222233357999999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
++++++++++++++.|||+++....+++++++|||+|+|++|++++++|+.+|+++|+++++++++++.++++|++++++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~ 241 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECIN 241 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence 99999999999999999998878889999999999999999999999999999877999999999999999999999998
Q ss_pred CCCCC--chhHHHHhhCCCccEEEEccCChHHHHHHHHHh-ccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeec
Q 016660 253 SKNCG--DKSIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 329 (385)
Q Consensus 253 ~~~~~--~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 329 (385)
..+.. ....+.+++.+++|+++|++|++..+..++..+ +.+ |+++.+|.......++++... +.++.++.+++..
T Consensus 242 ~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~ 319 (373)
T cd08299 242 PQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPML-LLTGRTWKGAVFG 319 (373)
T ss_pred ccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHH-HhcCCeEEEEEec
Confidence 77533 333356666668999999999877788877765 565 999999975432344555443 3467899998776
Q ss_pred CCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 330 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 330 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
.+..++++.++++.+.++.+.+++++++.|+++++.+|++.+.+++..|+++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 320 GWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred CCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 665456777888888888777777788999999999999999887777888864
No 26
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=6.6e-48 Score=368.67 Aligned_cols=361 Identities=41% Similarity=0.757 Sum_probs=310.5
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
+||+++.++++++++.+.|.|.+.+++|+|||.++++|+.|++...+.+. ..+|.++|||++|+|+++|++++++++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 57899998887799999999999999999999999999999998888654 34578999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|++.+..+|+.|.+|+++.+++|.....+++.|...+|..+|+- +|...+++.+.|+|++|+.++++.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999999999999999999999999887765555665666555553 5555666667789999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
++++++.+++.+||+++.+.+++.++++|||+|+|++|++++++|+.+|++.|+++++++++.++++++|++++++.++.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999988888899999999999989999999999999999668888889999999999999999988774
Q ss_pred --CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhc-cCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 257 --GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 257 --~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
+....+++++++++|++||++|....+..++++++ ++ |+++.+|.........++...+ .++.++.|+++..+..
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~ 316 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKS 316 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCch
Confidence 33344666665589999999998777899999999 96 9999998753334566666666 6788888887666655
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 381 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi 381 (385)
.+.+..++++++++.+++.+++++.|+++++.+||+.+++++..|+++
T Consensus 317 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~ 364 (365)
T cd05279 317 KDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL 364 (365)
T ss_pred HhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 678899999999998887777889999999999999998877778776
No 27
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.7e-48 Score=365.84 Aligned_cols=321 Identities=21% Similarity=0.253 Sum_probs=272.4
Q ss_pred EEeccCC----CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 20 AIATAPG----EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 20 ~~~~~~~----~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
+.+..++ .+++++++|.|.|+++||+|||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 4455554 238999999999999999999999999999999998876544457899999999999999999999999
Q ss_pred CEEEecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 96 drV~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
|||++.+. .+|+.|.+|.++++++|....+ .|...+| +|+||+.++++.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCCC
Confidence 99987764 4799999999999999976543 3433334 99999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
++++++.+++.+.|||+++ ..++++++++|||+|+|++|++++|+|+.+|+ +|++++++++|.++++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999987 46789999999999999999999999999999 799999999999999999999998864
Q ss_pred CCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCC
Q 016660 255 NCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK 334 (385)
Q Consensus 255 ~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 334 (385)
+.. .+++|+++++.+...++..++++++++ |+++.+|..... ...++...++.+++++.+++... +
T Consensus 218 ~~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~ 283 (329)
T TIGR02822 218 DTP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSNT---R 283 (329)
T ss_pred ccC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecCC---H
Confidence 311 126899999998888899999999997 999999974322 23456666777899999886332 3
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 335 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 335 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
+++.++++++++|++. ++++.|+|+++++|++.+.+++. +|+||
T Consensus 284 ~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 284 ADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 5788899999999775 35799999999999999988876 49887
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.4e-47 Score=363.20 Aligned_cols=335 Identities=25% Similarity=0.432 Sum_probs=288.5
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CC----------CCCCccccCceeEEEEEe
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FP----------AVFPRILGHEAIGVVESV 85 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~-~~----------~~~p~~~G~e~~G~V~~v 85 (385)
|||+++.+++. +++.++|.|+|.++||+|||.++++|++|++.+.+.. .. ..+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 68999998876 9999999999999999999999999999988665321 10 136889999999999999
Q ss_pred CCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC
Q 016660 86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (385)
Q Consensus 86 G~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~ 165 (385)
|+++++|++||+|+..+..+|+.|.+|+++..++|....+ .|... ..|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGG------------------GGGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCC------------------CCCceeeEEEechH
Confidence 9999999999999999999999999999999999964332 22211 02499999999999
Q ss_pred ceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc
Q 016660 166 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 245 (385)
Q Consensus 166 ~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l 245 (385)
.++++|+++++++++++ .++.|||+++ ...+++++++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999998876 5778999987 778899999999999999999999999999997899998999999999999
Q ss_pred CCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEE
Q 016660 246 GVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 324 (385)
Q Consensus 246 g~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 324 (385)
|++.++++++.++...+++++++ ++|++||++|+...++.++++++++ |+++.+|... ...+++...++.+++++.
T Consensus 217 ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~ 293 (351)
T cd08233 217 GATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKTLT 293 (351)
T ss_pred CCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcEEE
Confidence 99999998886666667778777 7999999999877789999999997 9999999754 345677777888999999
Q ss_pred EeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchH-HHHHHHHhcCCe--eEEEE
Q 016660 325 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI-NSAFDLLIKGKC--LRCVI 381 (385)
Q Consensus 325 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~-~~a~~~l~~~~~--~k~vi 381 (385)
|++... .+++.+++++++++++++.+++++.|+++++ ++|++.+.+++. +|+||
T Consensus 294 g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 294 GSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred EEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 986432 3689999999999999888888999999996 799999888774 69887
No 29
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.2e-47 Score=363.14 Aligned_cols=364 Identities=33% Similarity=0.583 Sum_probs=298.0
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
|+|||+++.++++++++.+.+.|.+.++||+|||.++++|++|++...+.++ ..+|.++|||++|+|+++|+++++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 5799999999877799999999999999999999999999999999888654 346889999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee-ccccccceeeeEeeccCceEECCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH-HFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~-~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
||+|++.+. .|+.|.+|+.+..++|.........|...+|.--+...+|..++ ++...|+|++|+.+++++++++|++
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 999998765 89999999999999998654322233333221111111111111 1223569999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++++++.+++++.|||.++.....++++++|||+|+|++|++++|+|+.+|+++|++++++++|.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999988788889999999999889999999999999999779999999999999999999999998
Q ss_pred CCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 254 KNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
++......+.++++.++|+++|++|+...+..++++++++ |+++.+|.........++...++.+++++.++.......
T Consensus 239 ~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (365)
T cd08278 239 KEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVP 317 (365)
T ss_pred CCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcCh
Confidence 7755555577777338999999999877789999999997 999999975333345666666667899998876543333
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEE
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 382 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~ 382 (385)
.+.+.+++++++++.+.+.+++ ..|+++++++|++.++++...|++|+
T Consensus 318 ~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 318 QEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred HHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 4567888999999988554444 58999999999999988877798874
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.2e-47 Score=360.23 Aligned_cols=341 Identities=22% Similarity=0.337 Sum_probs=281.0
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
..++|+++.++++++++.+++.|.|+++||+|||.++++|++|++.+.|.+....+|.++|||++|+|+++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~ 87 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV 87 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence 34899999999998999999999999999999999999999999998887644456889999999999999999999999
Q ss_pred CCEEEecCCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 95 GDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 95 GdrV~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
||+|++.+.. .|+.|.+|.++.+++|....+....++ ..| ....|+|+||+.++.+.++++|++
T Consensus 88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP~~ 152 (357)
T PLN02514 88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIPEG 152 (357)
T ss_pred CCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECCCC
Confidence 9999876644 699999999999999976532100000 001 111249999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~-~~~~lg~~~vv~ 252 (385)
+++++|+.+++.+.|||+++......+++++|+|+|+|++|++++|+||.+|+ +|++++.++++.+ .++++|++++++
T Consensus 153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~ 231 (357)
T PLN02514 153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV 231 (357)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence 99999999999999999987665566899999999999999999999999999 6777777776654 446799988877
Q ss_pred CCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 253 SKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
+.+. ..+.+.+ +++|++||++|...+++.++++++++ |+++.+|... ...+++...++.+++++.|++...
T Consensus 232 ~~~~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 232 SSDA---AEMQEAA-DSLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVIN--TPLQFVTPMLMLGRKVITGSFIGS-- 302 (357)
T ss_pred CCCh---HHHHHhc-CCCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCcccHHHHhhCCcEEEEEecCC--
Confidence 6541 2244444 36999999999877799999999997 9999999764 234666777888899999987543
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
..++.++++++++|++. +++ +.|+|+++.+||+.+.+++. +|++|.++
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 25789999999999654 456 68999999999999988876 59999875
No 31
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=5.4e-47 Score=358.84 Aligned_cols=323 Identities=21% Similarity=0.231 Sum_probs=258.7
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC----CCCCccccCceeEEEEEeCCCCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----AVFPRILGHEAIGVVESVGENVD 90 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~vG~~v~ 90 (385)
|..+++++++|+. +++.+.|.|. +++||+|||.++|||++|+++++|.+.. ..+|.++|||++|+|+++|.+
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~-- 76 (341)
T cd08237 1 MINQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG-- 76 (341)
T ss_pred CcccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--
Confidence 3467899999987 9999999995 9999999999999999999999887532 357999999999999998874
Q ss_pred CCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEEC
Q 016660 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (385)
Q Consensus 91 ~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i 170 (385)
+|++||||++.+..+|+ |.+|. ..++|....+ .|...+| +|+||+++++++++++
T Consensus 77 ~~~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 131 (341)
T cd08237 77 TYKVGTKVVMVPNTPVE-KDEII--PENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKL 131 (341)
T ss_pred ccCCCCEEEECCCCCch-hcccc--hhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEEC
Confidence 79999999999888887 54663 5577865443 2333334 9999999999999999
Q ss_pred CCCCCcccccccccchhhhhhhhhh--hccCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHHcCC
Q 016660 171 DPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGV 247 (385)
Q Consensus 171 P~~l~~~~aa~l~~~~~ta~~al~~--~~~~~~~~~VlI~G~g~vG~~ai~la~~-~G~~~vi~~~~~~~~~~~~~~lg~ 247 (385)
|+++++++||++. +++++|+++.. ...++++++|||.|+|++|++++|+|+. .|..+|++++++++|+++++++++
T Consensus 132 P~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~ 210 (341)
T cd08237 132 PDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADE 210 (341)
T ss_pred CCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCc
Confidence 9999998887665 78889987643 3456889999999999999999999986 665589999999999999988776
Q ss_pred CeEEeCCCCCchhHHHHhhCC-CccEEEEccCC---hHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEE
Q 016660 248 TEFVNSKNCGDKSIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKIL 323 (385)
Q Consensus 248 ~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i 323 (385)
+..++ .+..+ ++|+|||++|+ +.+++.++++++++ |+++.+|... ...++++..++.+++++
T Consensus 211 ~~~~~-----------~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i 276 (341)
T cd08237 211 TYLID-----------DIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKGLTL 276 (341)
T ss_pred eeehh-----------hhhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCceEE
Confidence 53321 11223 69999999994 46689999999997 9999999753 34566777788899999
Q ss_pred EEeeecCCCCCCcHHHHHHHHHcC---CCCCCCceeeeeecc---hHHHHHHHHhcCCeeEEEEEeC
Q 016660 324 MGSLFGGLKAKSDIPILLKRYMDK---ELELDKFVTHEMKFE---EINSAFDLLIKGKCLRCVIWMG 384 (385)
Q Consensus 324 ~g~~~~~~~~~~~~~~~~~~~~~g---~~~~~~~i~~~~~l~---~~~~a~~~l~~~~~~k~vi~~~ 384 (385)
.|+.... .+++++++++++++ ...+++++++.|+|+ ++.++|+.+.++..+|+||+++
T Consensus 277 ~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 277 VGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 9985322 35789999999998 346778899999985 5666666665555579999874
No 32
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=7.6e-46 Score=359.29 Aligned_cols=331 Identities=20% Similarity=0.227 Sum_probs=268.3
Q ss_pred eeeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccccc-ccCCCC------CCCCccccCceeEEEEEeCC
Q 016660 15 IQCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP------AVFPRILGHEAIGVVESVGE 87 (385)
Q Consensus 15 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~-~g~~~~------~~~p~~~G~e~~G~V~~vG~ 87 (385)
|.|||+++.+++. +++.++|.|+|+++||+|||.++|||++|++.+ .|.... ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5689999999986 999999999999999999999999999999976 443211 23688999999999999999
Q ss_pred CCC-CCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC-
Q 016660 88 NVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA- 165 (385)
Q Consensus 88 ~v~-~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~- 165 (385)
+++ +|++||||++.+...|+.|.+|. + +|...+| +|+||++++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~-------------~g~~~~G-------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G-------------YSYTYPG-------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C-------------ccccCCC-------------------cceEEEEecHHh
Confidence 998 59999999999999999988772 1 2222334 99999999987
Q ss_pred ---ceEECCCCCCccccccc-c--cchhhhhhhh--------hhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcC--CCE
Q 016660 166 ---HVVKVDPTVPPNRACLL-S--CGVSTGVGAA--------WRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG--ATR 228 (385)
Q Consensus 166 ---~~~~iP~~l~~~~aa~l-~--~~~~ta~~al--------~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G--~~~ 228 (385)
.++++|+++++++|+++ + |. .+++.++ .+..+++++++|+|+|+ |++|++++|+|+.+| +.+
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~ 205 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSL 205 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCce
Confidence 68999999999998865 2 22 2233322 24567899999999985 999999999999975 457
Q ss_pred EEEEcCCchHHHHHHHc--------CCC-eEEeCCC-CCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceE
Q 016660 229 IIGVDVISEKFEIGKRF--------GVT-EFVNSKN-CGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 297 (385)
Q Consensus 229 vi~~~~~~~~~~~~~~l--------g~~-~vv~~~~-~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~ 297 (385)
|++++++++|+++++++ |++ .++++++ .+....+++++++ ++|++||++|....++.++++++++ |++
T Consensus 206 Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 206 LVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 99999999999999997 776 5677754 2344457778877 8999999999888899999999997 888
Q ss_pred EEeccCC-CCCcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe
Q 016660 298 IVLGVDQ-PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 376 (385)
Q Consensus 298 v~~g~~~-~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~ 376 (385)
+.++... .....+++...++.+++++.|+.... .++++++++++++|++++.+++++.|+|+++++|++.+..+..
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~ 361 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPG 361 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCC
Confidence 7765422 12234677777888999999986432 3579999999999999998899999999999999999984445
Q ss_pred eEEEEEeC
Q 016660 377 LRCVIWMG 384 (385)
Q Consensus 377 ~k~vi~~~ 384 (385)
+|+||.++
T Consensus 362 gKvvl~~~ 369 (410)
T cd08238 362 GKKLIYTQ 369 (410)
T ss_pred ceEEEECC
Confidence 69999764
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.8e-45 Score=348.99 Aligned_cols=343 Identities=25% Similarity=0.302 Sum_probs=284.0
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++. +++.+.|.|.+.++||+|||.++++|++|++.+.+.+....+|.++|||++|+|+++|+++++|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 78999999886 89999999999999999999999999999998877665445688999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEECCCCC
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~iP~~l 174 (385)
+|+..+..+|+.|..|..+.++.|.........+... .|+|+||+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~-------------------~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFK-------------------DGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCC-------------------CcceeEEEEcchhhCceEECCCCC
Confidence 9999888899999999999999997532100011111 2499999999974 899999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
++++++.++..+.|||+++ ....++++++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++++++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999998999999974 677899999999999899999999999999997799999999999999999999999988
Q ss_pred CCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccH--HHHhhcCcEEEEeeecCC
Q 016660 255 NCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS--FEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 255 ~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~--~~~~~~~~~i~g~~~~~~ 331 (385)
+.+....+..++.+ ++|++||++|+...+..++++++++ |+++.+|.........++. .....+..++.+....
T Consensus 220 ~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 296 (351)
T cd08285 220 NGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP-- 296 (351)
T ss_pred CCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC--
Confidence 75555567777766 8999999999887789999999997 9999999764322233332 2223345666654321
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCc-eeeeeecchHHHHHHHHhcCCe--eEEEEEe
Q 016660 332 KAKSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAFDLLIKGKC--LRCVIWM 383 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~-i~~~~~l~~~~~a~~~l~~~~~--~k~vi~~ 383 (385)
...+++.++++++++|++.+..+ .++.++++++++|++.+++++. .|++|++
T Consensus 297 ~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 12467999999999998888443 4456899999999999988763 5999864
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=4.4e-45 Score=346.05 Aligned_cols=335 Identities=20% Similarity=0.396 Sum_probs=280.3
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++. +++.++|.|+|.++||+||+.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999999885 99999999999999999999999999999999888765445689999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|++.+..+|+.|.+|.++++++|.+..+ .+... .|+|+||+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHR-------------------DGGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEcc-------------------CCcceeeEEechHHeEECcCCCCH
Confidence 99999999999999999999999964332 12212 249999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~-~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
+.++ +...+.++|. +....+++++++|+|+|+|++|++++|+|+. +|++.++++++++++.++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4457788885 5677889999999999999999999999996 69977888999999999999999999998876
Q ss_pred CCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCC
Q 016660 256 CGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK 334 (385)
Q Consensus 256 ~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 334 (385)
......+.. .+ ++|++||++|++..+..++++++++ |+++.+|.... ...++...+..+++++.++.. ..
T Consensus 216 ~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~~ 286 (339)
T PRK10083 216 EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL----NA 286 (339)
T ss_pred ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----Ch
Confidence 443333322 23 5689999999887799999999997 99999997532 333444455567888877653 23
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC--eeEEEEEeCC
Q 016660 335 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVIWMGE 385 (385)
Q Consensus 335 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~--~~k~vi~~~~ 385 (385)
+.+.+++++++++.+.+.+++++.|+++++++|++.++++. .+|+++++.|
T Consensus 287 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 287 NKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 57889999999998887666789999999999999997543 3699998865
No 35
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.1e-46 Score=318.86 Aligned_cols=318 Identities=23% Similarity=0.280 Sum_probs=277.0
Q ss_pred CCCeeeeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCC
Q 016660 12 GKPIQCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (385)
Q Consensus 12 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (385)
..|+..|-+++.+.|.+ +++++.|.|+|.++|++||-.|+|+|..|.-..+|.+.+...|.+||-|.+|+|+++|++|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 35677899998888865 9999999999999999999999999999999999999777889999999999999999999
Q ss_pred CCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEE
Q 016660 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (385)
Q Consensus 90 ~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~ 169 (385)
+++++||||+.. + . .|.|+|++.+|...+++
T Consensus 84 tdrkvGDrVayl----------------------------~--~-------------------~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYL----------------------------N--P-------------------FGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEe----------------------------c--c-------------------chhhheeccccceeecc
Confidence 999999999632 1 1 13899999999999999
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC
Q 016660 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (385)
Q Consensus 170 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 248 (385)
+|+.+++.+||++.+.++|||.-+++..++++|++||++.+ |++|++++|++++.|+ .+|++.++.+|.+.+++.|+.
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999899999998888889999999999965 9999999999999999 899999999999999999999
Q ss_pred eEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEee
Q 016660 249 EFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 327 (385)
Q Consensus 249 ~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 327 (385)
+.++++.++....+.+.++| |+|+++|.+|... ++.++.+|++. |.+|.+|+.. ...-+++...+..+++++...+
T Consensus 194 h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lvrps 270 (336)
T KOG1197|consen 194 HPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLVRPS 270 (336)
T ss_pred ceeeccchhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhccHh
Confidence 99999998888889999999 9999999999988 99999999997 9999999863 3344555555656777766554
Q ss_pred ecCCCC-CCc----HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 328 FGGLKA-KSD----IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 328 ~~~~~~-~~~----~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
+..|.. +.. ..+++.++.+|.+++. |.++|||+++.+|+..++++.. +|+++.+.
T Consensus 271 l~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 271 LLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred hhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 444432 222 3456777788977777 9999999999999999988775 69998764
No 36
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.9e-44 Score=340.82 Aligned_cols=331 Identities=23% Similarity=0.370 Sum_probs=282.8
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++.++++.++|.|.+.++||+|||.++++|++|+..+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 68999999966699999999999999999999999999999998888654445688999999999999999999999999
Q ss_pred EEEecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 97 rV~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
+|++.+ ...|+.|.+|..++++.|....+ .|....| +|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCC
Confidence 998754 56799999999999999986554 3333233 999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
+.+++.+++.+.|||+++.. ..+.++++|||+|+|++|++++++|+.+|+ +|+++++++++++.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998744 589999999999999999999999999999 7999999999999999999999999877
Q ss_pred CCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCC
Q 016660 256 CGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 335 (385)
Q Consensus 256 ~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 335 (385)
.+....+.++ +++|++||++|....+..++++++++ |+++.+|... ...+++...++.+++++.+..... ..
T Consensus 217 ~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~---~~ 288 (333)
T cd08296 217 EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT---AL 288 (333)
T ss_pred ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---HH
Confidence 5544444444 36999999998777799999999997 9999999754 345667677778999999986322 35
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 336 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 336 ~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
++..++++++++.+. +++ +.|+++++.+||+.+.+++. +|+|++
T Consensus 289 ~~~~~~~~~~~~~l~--~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 289 DSEDTLKFSALHGVR--PMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHhCCCC--ceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 788888888888654 345 68999999999999998886 598874
No 37
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=4e-44 Score=342.49 Aligned_cols=361 Identities=43% Similarity=0.694 Sum_probs=296.2
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++.++++.++|.|.+.+++|+|||.++++|+.|+..+.+.++ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 68999999988899999999999999999999999999999998888664 35677899999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|+..+..+|++|.+|++++.++|...... -+|...++..+... .|.......+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFTA-DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCcccccc-cCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 999999999999999999999999765320 01100111000000 0000000123469999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
++++++++.+.|||.++....++.++++|||+|+|++|++++++|+..|+++|+++++++++.++++++|+++++++++.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 237 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED 237 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc
Confidence 99999999999999988888899999999999889999999999999999559999899999999999999999988875
Q ss_pred CchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCC
Q 016660 257 GDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 335 (385)
Q Consensus 257 ~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 335 (385)
.....+.+++.+ ++|+++|++++...+..++++++++ |+++.+|.........++...+..++..+.++.+......+
T Consensus 238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (363)
T cd08279 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR 316 (363)
T ss_pred cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence 555557777765 8999999999877789999999997 99999987543344566666666678888887655444456
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 016660 336 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 381 (385)
Q Consensus 336 ~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi 381 (385)
.+++++++++++.+.+.+++++.|+++++.+|++.+.+++..|.||
T Consensus 317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 7889999999998877666778999999999999998887666654
No 38
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.1e-43 Score=341.79 Aligned_cols=354 Identities=26% Similarity=0.389 Sum_probs=287.7
Q ss_pred eeEEEeccCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++. +++.++|.|.| .+++|+||+.++++|++|+..+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 68999998865 99999999998 49999999999999999999998887655568899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEE
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVK 169 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~ 169 (385)
|+|+..+..+|+.|.+|+.+..++|++..... .+|....|...+++. . ....|+|++|++++.+ .+++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHL-----T-GGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccc-----c-CCCCCeeEEEEEcccccCeEEE
Confidence 99999998899999999999999998644310 001110010000000 0 0113599999999987 8999
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe
Q 016660 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (385)
Q Consensus 170 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 249 (385)
+|+++++++|+++++.+.|||+++ ...++.++++|||+|+|.+|++++++|+..|+.+|+++++++++.+++++++...
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~ 232 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE 232 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence 999999999999999999999987 7788999999999998999999999999999866999999999999999985446
Q ss_pred EEeCCCCC-chhHHHHhhCC-CccEEEEccCCh---------------------HHHHHHHHHhccCCceEEEeccCCCC
Q 016660 250 FVNSKNCG-DKSIIIDMTDG-GADYCFECVGLA---------------------SLVQEAYACCRKGWGKTIVLGVDQPG 306 (385)
Q Consensus 250 vv~~~~~~-~~~~i~~~~~g-~~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~g~~~~~ 306 (385)
++++.+.. +...+++++++ ++|++||++|+. ..+++++++++++ |+++.+|.....
T Consensus 233 vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~ 311 (386)
T cd08283 233 TINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT 311 (386)
T ss_pred EEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC
Confidence 77776643 44557777777 899999999853 3578899999997 999999875432
Q ss_pred CcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC--eeEEEEEe
Q 016660 307 SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVIWM 383 (385)
Q Consensus 307 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~--~~k~vi~~ 383 (385)
...++...++.+++++.+.... ..+.+.+++++++++++.+.+++++.|+++++.+|++.+.++. .+|++|++
T Consensus 312 -~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 312 -VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred -cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 3345555567789998887422 2357888999999998887766778999999999999998876 35999863
No 39
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2e-44 Score=336.58 Aligned_cols=303 Identities=19% Similarity=0.270 Sum_probs=244.2
Q ss_pred eeeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecc-cccccccccCCCC---CCCCccccCceeEEEEEeCCCCCC
Q 016660 16 QCRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLC-HSDVTFWKMKDFP---AVFPRILGHEAIGVVESVGENVDG 91 (385)
Q Consensus 16 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 91 (385)
++||+++.+++. +++.+.|.|+|+++||+|||.+++|| ++|++.++|.++. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 378999998876 99999999999999999999999996 7999988887643 3579999999999999999998 6
Q ss_pred CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECC
Q 016660 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (385)
Q Consensus 92 ~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP 171 (385)
|++||||++. |..|.+|..+ .. |+|+||+.++++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~~-----------------~~-------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVRG-----------------LF-------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Cccccccccc-----------------cC-------------------CcccceEEcCHHHceeCC
Confidence 9999999873 2233332110 01 399999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 172 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
++++++. ++++ ...|||+++.+ . ..++++|||+|+|++|++++|+||++|++.|++++.+++|++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9999754 5555 57899997744 3 34688999999999999999999999997677887777777766543 455
Q ss_pred eCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 252 NSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
|+.+. .+.++|+||||+|+..+++.++++++++ |+++++|... ....++...++.|++++.++...
T Consensus 192 ~~~~~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~~~~~i~~~~~~-- 257 (308)
T TIGR01202 192 DPEKD---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYT--EPVNFDFVPAFMKEARLRIAAEW-- 257 (308)
T ss_pred Chhhc---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecC--CCcccccchhhhcceEEEEeccc--
Confidence 54331 1237999999999988789999999997 9999999753 23456666677888999887432
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC-eeEEEEE
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-CLRCVIW 382 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~-~~k~vi~ 382 (385)
..++++++++++++|++++++++++.|+|+++++|++.+.++. .+|++|+
T Consensus 258 -~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 258 -QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred -chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 2367999999999999999889999999999999999876654 4699874
No 40
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.7e-43 Score=336.03 Aligned_cols=338 Identities=28% Similarity=0.414 Sum_probs=288.9
Q ss_pred eeEEEeccCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++. +++.+.|.|+| .++||+|||.++++|+.|+..+.|.+....+|.++|||++|+|+++|++++++++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999998886 99999999986 79999999999999999999998876554558899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEECCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~iP~~ 173 (385)
|+|++.+...|+.|.+|..+..+.|....+. .|...+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLID-------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccC-------------------CeeeeEEEcccccCceEECCCC
Confidence 9999999999999999999999999765432 122223 399999999987 89999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++.+++.+++.+.|||.++....++.++++|||.|+|++|++++|+|+.+|..+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877777889999999999899999999999999994488889888999999999999999998
Q ss_pred CCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 254 KNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
++.+....+.+++.+ ++|++||++|....+..+++.++++ |+++.+|... ....+++..++.+++++.+..+.
T Consensus 219 ~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~--- 292 (345)
T cd08286 219 AKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHG--KPVDLHLEKLWIKNITITTGLVD--- 292 (345)
T ss_pred ccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccC--CCCCcCHHHHhhcCcEEEeecCc---
Confidence 875555557777776 8999999999877789999999997 9999999653 23556666667789999875322
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcC---CeeEEEEEe
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG---KCLRCVIWM 383 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~---~~~k~vi~~ 383 (385)
.+.+..++++++++.+.+.+++++.|++++++++++.+... ...|++|++
T Consensus 293 -~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 -TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred -hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 24688889999999887777678999999999999999875 245999864
No 41
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.8e-43 Score=336.02 Aligned_cols=341 Identities=29% Similarity=0.411 Sum_probs=284.0
Q ss_pred eeEEEeccCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++. +.+.+.|.|.| .+++|+|||.++++|+.|++.+.+.++...+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 58999998877 89999999999 99999999999999999999988877655668899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEECCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~iP~~ 173 (385)
|+|+..+..+|+.|.+|+++..++|.......+.+. ...|+|++|++++.+ +++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999976442111111 123499999999987 89999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++++++.+++++.|||+++ ...+++++++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999987 66789999999998889999999999999997578888888899999999999999998
Q ss_pred CCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 254 KNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
++......++.++++ ++|++||++++...+..++++++++ |+++.+|........ ......+.+++++.+.....
T Consensus 220 ~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 295 (347)
T cd05278 220 KNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPL-PLLGEWFGKNLTFKTGLVPV-- 295 (347)
T ss_pred CcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCccc-CccchhhhceeEEEeeccCc--
Confidence 875555557777776 8999999999866689999999997 999999864322111 11122345677777754222
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEEe
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWM 383 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~--~k~vi~~ 383 (385)
.+.+.+++++++++.+.+.+++...+++++++++++.+..++. .|+++++
T Consensus 296 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 296 -RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 4678899999999988765556788999999999999887765 4888763
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=3.6e-43 Score=333.06 Aligned_cols=333 Identities=29% Similarity=0.435 Sum_probs=285.6
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---CCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++.++++++++.+.+.|.+.+++|+|||.++++|++|+....|.+. ...+|.++|+|++|+|+++|+++.+|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999998877799999999999999999999999999999998887654 245578999999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+..+...|+.|..|+.+..++|....+ .|...+| +|++|+.++.++++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence 99999999999999999999999999987775 4444444 9999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhh-ccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+| + +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999987665 46888999999999889999999999999 6 788888889999999999999999
Q ss_pred eCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecC
Q 016660 252 NSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 330 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 330 (385)
++++. +...+.+++++ ++|+++|++|+......++++++++ |+++.+|.... ..++....+.+++++.+....
T Consensus 218 ~~~~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~- 291 (340)
T cd05284 218 NASDD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG- 291 (340)
T ss_pred cCCcc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc-
Confidence 98875 55557777776 8999999999877789999999997 99999986532 344444445789998887533
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 331 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
..+.+.+++++++++.+.+ ..+.|+++++++|++.+.+++. +|+++.+
T Consensus 292 --~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 292 --TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred --cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2357888999999997764 2467999999999999988775 4888753
No 43
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=6.6e-43 Score=334.63 Aligned_cols=361 Identities=30% Similarity=0.483 Sum_probs=293.1
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCC---CC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG---VV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~---~~ 93 (385)
|||+++..++.++++.+.|.|.++++||+|||.++++|++|++...+.++. .+|.++|||++|+|+.+|+++++ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999998777999999999999999999999999999999988886643 56789999999999999999988 99
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g-~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
+||+|+..+..+|+.|.+|+.+..++|.+..+++..+ ...+|...+....+..+ .....|+|++|+.++.+.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPV-YMYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcc-ccccCCcceeEEEechhhEEECCC
Confidence 9999999999999999999999999998765321111 11111000000000000 001235999999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
++++.+++.+++++.|||.++.....+.++++|||+|+|.+|++++++|+..|+++|++++.++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999998877778899999999988999999999999999955998888999999999999999999
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
+++.++...+++.+++ ++|++||++++...+..++++++++ |+++.+|.........++...++.+++++.+++..
T Consensus 239 ~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 315 (367)
T cd08263 239 AAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA-- 315 (367)
T ss_pred CCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC--
Confidence 8876666667777766 8999999999974589999999997 99999986543334456666666788888885321
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
...+.+..++++++++.+.+.+++++.++++++.++++.+.+++. +|+||+
T Consensus 316 ~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 123578889999999988776667789999999999999988775 588874
No 44
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=5.1e-43 Score=333.36 Aligned_cols=335 Identities=26% Similarity=0.421 Sum_probs=279.8
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC---------CCCCccccCceeEEEEEeCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP---------AVFPRILGHEAIGVVESVGE 87 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~---------~~~p~~~G~e~~G~V~~vG~ 87 (385)
|||+++.+++. +++++.|.|++.+++|+||+.++++|+.|+..+.|.... ..+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999998886 999999999999999999999999999999988775311 14577899999999999999
Q ss_pred CCC--CCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC
Q 016660 88 NVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA 165 (385)
Q Consensus 88 ~v~--~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~ 165 (385)
+++ +|++||+|+..+..+|+.|.+|+++..++|..... +|+.. ...|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeecc-----------------CCCCcceeeEEcccc
Confidence 999 89999999999999999999999999999964321 22210 012499999999988
Q ss_pred -ceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH
Q 016660 166 -HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (385)
Q Consensus 166 -~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 244 (385)
.++++|++++++.++++ .++.|+|+++ +..+++++++|||.|+|++|++++++|+.+|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 57899999999999988 7889999987 77889999999997789999999999999998778889889999999999
Q ss_pred cCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHH-hhcCcE
Q 016660 245 FGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV-LHSGKI 322 (385)
Q Consensus 245 lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~ 322 (385)
+|++.++++++......+.+++++ ++|++||++|+...+..++++++++ |+++.+|..... ..++...+ ..++++
T Consensus 218 ~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhcccccE
Confidence 999999988765555667777777 8999999999776689999999997 999999865422 23333333 346778
Q ss_pred EEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 323 LMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 323 i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
+.++.... ..+.+++++++++.+.+.+++++.|+++++++|++.+++++. +|+++
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 88775332 468889999999988876557899999999999999988765 48764
No 45
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.2e-42 Score=330.11 Aligned_cols=339 Identities=28% Similarity=0.398 Sum_probs=288.8
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++.++++.+.|.|.+.+++|+||+.++++|+.|+..+.|......+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998887899999999999999999999999999999999888765455688999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEECCCCC
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPTV 174 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~iP~~l 174 (385)
+|+..+..+|+.|.+|..+..++|....+ .|...+ |+|++|+.++.+ +++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHP-------------------GSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccCCC-------------------CcceeEEEcccccCceEECCCCC
Confidence 99987778899999999999999986432 222223 399999999975 899999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
++++++.+++.+.|||+++....++.++++|+|+|+|++|++++++|+..|+ +|+++.+++++.+.++++|++++++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999988777889999999999999999999999999999 889998899999999999999999887
Q ss_pred C-CCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCc-ccccHHHHhhcCcEEEEeeecCCC
Q 016660 255 N-CGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ-LSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 255 ~-~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
+ .+....+.++..+++|++||++|+...+..++++++++ |+++.+|....... ..++...++.++.++.+....
T Consensus 218 ~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 293 (345)
T cd08260 218 EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM--- 293 (345)
T ss_pred cchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---
Confidence 6 45555566666558999999999776688999999997 99999987542222 455556666788999887532
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
..+.+++++++++++.+.+.+++++.++++++++|++.+..++. +|+|++
T Consensus 294 ~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 24678889999999988776656789999999999999987765 487763
No 46
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=5.2e-43 Score=303.46 Aligned_cols=319 Identities=21% Similarity=0.282 Sum_probs=266.5
Q ss_pred CCCeeeeEEEeccCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCC
Q 016660 12 GKPIQCRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGE 87 (385)
Q Consensus 12 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~ 87 (385)
.++...|+++|...++| +++.+.++|....++|+||.+|+.|||+|+.+++|.|+. +.+|.+-|+|++|+|+.+|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 34567899999999988 888999999988888999999999999999999999986 78899999999999999999
Q ss_pred CCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCce
Q 016660 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (385)
Q Consensus 88 ~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~ 167 (385)
++++|++||+|+... .+.|+|++|.+.+++.+
T Consensus 95 ~vkgfk~Gd~VIp~~------------------------------------------------a~lGtW~t~~v~~e~~L 126 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLS------------------------------------------------ANLGTWRTEAVFSESDL 126 (354)
T ss_pred CcCccCCCCeEeecC------------------------------------------------CCCccceeeEeecccce
Confidence 999999999998542 22459999999999999
Q ss_pred EECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH----HH
Q 016660 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IG 242 (385)
Q Consensus 168 ~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~----~~ 242 (385)
+++++.++.+.||++.+..+|||..|.+.-++++||+|+-.|+ +++|++.+|+||++|++.|-++ ++...++ .+
T Consensus 127 i~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~L 205 (354)
T KOG0025|consen 127 IKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQL 205 (354)
T ss_pred EEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHH
Confidence 9999999999999999999999999988889999999999998 9999999999999999666666 5544444 45
Q ss_pred HHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCc
Q 016660 243 KRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGK 321 (385)
Q Consensus 243 ~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 321 (385)
+.+||++|+...+....+..+..... ++.+.|||+|+.. ..+..+.|.+| |.++.+|. ++..+.+++...+++|++
T Consensus 206 k~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGG-MSkqPv~~~ts~lIFKdl 282 (354)
T KOG0025|consen 206 KSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGG-MSKQPVTVPTSLLIFKDL 282 (354)
T ss_pred HHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecC-ccCCCcccccchheeccc
Confidence 57999999976663333322222334 7999999999999 77899999997 99999998 457788899999999999
Q ss_pred EEEEeeecCCCCCC--------cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEEEeC
Q 016660 322 ILMGSLFGGLKAKS--------DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVIWMG 384 (385)
Q Consensus 322 ~i~g~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~--~k~vi~~~ 384 (385)
.+.|+|+..|.... .+.++.++++.|++... -....+|++...|++...+... +|.+|.++
T Consensus 283 ~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 283 KLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred eeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 99999998876422 35578888899977655 3457789999999886655433 47776654
No 47
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.6e-42 Score=328.44 Aligned_cols=336 Identities=27% Similarity=0.377 Sum_probs=282.5
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC------------CCCCCccccCceeEEEEE
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF------------PAVFPRILGHEAIGVVES 84 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~ 84 (385)
|||+++..++.++++.+.|.|++.++||+|||.++++|++|++.+.+.++ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 78999998888899999999999999999999999999999998877543 123467899999999999
Q ss_pred eCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeecc
Q 016660 85 VGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (385)
Q Consensus 85 vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~ 164 (385)
+|++++++++||+|+..+...|+.|.+|.++.+++|....+ .|.... |+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD-------------------GGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------------CcceeeEEecH
Confidence 99999999999999999999999999999999999965432 121122 49999999999
Q ss_pred CceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH
Q 016660 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (385)
Q Consensus 165 ~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 244 (385)
+.++++|+++++.+++++.+.+.|||+++.....+.++++|||+|+|++|++++|+|+..|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999987666666789999999889999999999999999788899889999999999
Q ss_pred cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEE
Q 016660 245 FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 324 (385)
Q Consensus 245 lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 324 (385)
+|++.+++.++..+...+.++.++++|++||++|....+..++++++++ |+++.+|...... .++...+..++.++.
T Consensus 219 ~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~~~~~~i~ 295 (350)
T cd08240 219 AGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEA--TLPLPLLPLRALTIQ 295 (350)
T ss_pred hCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCC--cccHHHHhhcCcEEE
Confidence 9999888887755555566666558999999999877799999999997 9999998754322 233333445788888
Q ss_pred EeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 325 GSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 325 g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
+...... +++.+++++++++.+.+. ..+.|++++++++++.+..++. +|++++
T Consensus 296 ~~~~~~~---~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 296 GSYVGSL---EELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EcccCCH---HHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 8754432 578889999999976643 5578999999999999987765 488875
No 48
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2.7e-42 Score=333.31 Aligned_cols=339 Identities=18% Similarity=0.203 Sum_probs=277.1
Q ss_pred CCeeeeEEEecc--CCC---CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC----------CCCCccccCc
Q 016660 13 KPIQCRAAIATA--PGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP----------AVFPRILGHE 77 (385)
Q Consensus 13 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~----------~~~p~~~G~e 77 (385)
.|.+|+|+++.. ++. .+++.+.|.|.++++||+|||.++++|++|++.+.+.... ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 567899998853 222 3788999999999999999999999999999887664110 1123588999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecccccccee
Q 016660 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157 (385)
Q Consensus 78 ~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~ 157 (385)
++|+|+++|++++.|++||+|++.+...|+.|..|..+..++|....+ +|+.. ..|+|+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~------------------~~g~~a 147 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYET------------------NYGSFA 147 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccC------------------CCCcce
Confidence 999999999999999999999999999999999999999999975443 33321 124999
Q ss_pred eeEeeccCceEECCCCCCcccccccccchhhhhhhhhhh--ccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 016660 158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV 234 (385)
Q Consensus 158 ~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~--~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~ 234 (385)
+|+.++...++++|+++++++++.+++++.|||+++... ++++++++|||+|+ |++|++++++|+.+|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999987654 67899999999997 9999999999999999 6777888
Q ss_pred CchHHHHHHHcCCCeEEeCCCCC----------------------chhHHHHhhCC--CccEEEEccCChHHHHHHHHHh
Q 016660 235 ISEKFEIGKRFGVTEFVNSKNCG----------------------DKSIIIDMTDG--GADYCFECVGLASLVQEAYACC 290 (385)
Q Consensus 235 ~~~~~~~~~~lg~~~vv~~~~~~----------------------~~~~i~~~~~g--~~d~vid~~g~~~~~~~~~~~l 290 (385)
++++.++++++|+++++++++.+ +...+.+++++ ++|++||++|+.. +..+++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHh
Confidence 99999999999999999875421 12336667766 6999999999854 89999999
Q ss_pred ccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHH
Q 016660 291 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 370 (385)
Q Consensus 291 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~ 370 (385)
+++ |+++.+|.... ....++...++.++.++.+++... .+.+.+++++++++.+.+ .+++.|+++++++|++.
T Consensus 306 ~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~ 378 (393)
T cd08246 306 DRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQL 378 (393)
T ss_pred ccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHH
Confidence 997 99999987532 224455566667788888875433 257888999999996653 46789999999999999
Q ss_pred HhcC-Ce-eEEEE
Q 016660 371 LIKG-KC-LRCVI 381 (385)
Q Consensus 371 l~~~-~~-~k~vi 381 (385)
+.++ .. +|+++
T Consensus 379 ~~~~~~~~gkvvv 391 (393)
T cd08246 379 MHRNQHHVGNMAV 391 (393)
T ss_pred HHhCccccceEEE
Confidence 9877 44 58776
No 49
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5e-42 Score=325.36 Aligned_cols=337 Identities=23% Similarity=0.371 Sum_probs=277.2
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC---CCCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
||++++.++++.+++.+.|.|.|.++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 5899999888779999999999999999999999999999999766532 1234677899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+..+..+|+.|.+|+.+.+++|....+ .+...+| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------------AFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------------cceeeEEechHHeEECcCC
Confidence 99999999999999999999999999975432 2222333 9999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++.+++.+ ..+.++++++.. ...++++|+|.|+|++|++++|+|+++|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999888755 455666655432 34689999999889999999999999999668888888999999999999999988
Q ss_pred CCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 254 KNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
++......+.+++++ ++|++|||.|+...++.++++++++ |+++.+|.... ..+++...+..+++++.++....
T Consensus 216 ~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~-- 290 (341)
T PRK05396 216 AKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGRE-- 290 (341)
T ss_pred ccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEccC--
Confidence 875565657777766 8999999999888899999999997 99999987542 23344566677888888764221
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEeC
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 384 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~~ 384 (385)
..+.+..++++++++ +.+.+++.+.++++++++|++.+.++..+|++++.+
T Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 291 MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 124566788888888 545556779999999999999988776569998753
No 50
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6e-42 Score=325.34 Aligned_cols=336 Identities=27% Similarity=0.411 Sum_probs=281.3
Q ss_pred eeEEEeccCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++. +++.+.|.|.| .++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|++++++++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 68999998876 99999999996 8999999999999999999988877543 347899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEECCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~iP~~ 173 (385)
|+|+..+..+|+.|.+|..+..++|....+ +|...+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCC
Confidence 999886778899999999999999986443 3444444 99999999875 99999999
Q ss_pred CCccccc-----ccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC
Q 016660 174 VPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT 248 (385)
Q Consensus 174 l~~~~aa-----~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 248 (385)
+++..+. ++.+.+.|||+++ ...++.++++|+|.|+|++|++++|+|+++|++.++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9882221 2235678899876 467899999999998899999999999999996789998888899999999999
Q ss_pred eEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEee
Q 016660 249 EFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSL 327 (385)
Q Consensus 249 ~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~ 327 (385)
.++++++......+.+++++ ++|+++|++|+...+..++++++++ |+++.+|.... ...++....+.+++++.+..
T Consensus 216 ~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 216 DIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAGGP 292 (345)
T ss_pred eEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEEec
Confidence 99999875555557777776 8999999999887799999999997 99999987542 34455545567899998753
Q ss_pred ecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 328 FGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
.. ..+.+.+++++++++.+.+.+++++.+++++++++++.+.+++..|++|++
T Consensus 293 ~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 293 AP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred CC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 22 235788999999999887766677899999999999998887777999863
No 51
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=8.7e-42 Score=320.74 Aligned_cols=317 Identities=23% Similarity=0.364 Sum_probs=268.5
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++. ++++++|.|++.++||+|||.++++|++|+....|.++ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 58999998764 99999999999999999999999999999998887653 5778999999999999998 78999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
||...+..+|+.|.+|..+.++.|..... .+. ..+| +|++|++++.++++++|++++
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~ 131 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG-------------------AFAEYLTLPLENLHVVPDLVP 131 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------------ceEEEEEechHHeEECcCCCC
Confidence 99999999999999999999999976553 232 1233 999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
.++++.+ ..+.++|. +.+..+++++++|||+|+|.+|++++|+|+.+|+ +|++++.++++.++++++|++.++++++
T Consensus 132 ~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~ 208 (319)
T cd08242 132 DEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA 208 (319)
T ss_pred HHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc
Confidence 9888864 34556665 5577889999999999999999999999999999 6899988999999999999998887754
Q ss_pred CCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCC
Q 016660 256 CGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK 334 (385)
Q Consensus 256 ~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 334 (385)
. +.+ ++|++||++|+...+..++++++++ |+++..+... ....++...+..++.++.++...
T Consensus 209 ~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~----- 271 (319)
T cd08242 209 E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA--GPASFDLTKAVVNEITLVGSRCG----- 271 (319)
T ss_pred c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC--CCCccCHHHheecceEEEEEecc-----
Confidence 1 233 7999999999877789999999997 9999877543 23455666667788888887532
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 335 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 335 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
.+.+++++++++.+++.+++++.|+++++++||+.+.++..+|++|++
T Consensus 272 -~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 272 -PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred -cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 378899999999887777788999999999999999877667998863
No 52
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.4e-41 Score=326.25 Aligned_cols=344 Identities=24% Similarity=0.329 Sum_probs=279.2
Q ss_pred eeEEEeccCCCCcEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
||++++.+++. ++++++|+|.+ .++||+|||.++++|++|++...|.+. ..+|.++|||++|+|+++|++++.|++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 58999998875 99999999996 799999999999999999999888765 3458899999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEEC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKV 170 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~---~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~i 170 (385)
|+|+..+..+|+.|..|++++.++|...... +.+|+.. . ....|+|++|+.++.+ .++++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~-----~----------~~~~g~~a~y~~v~~~~~~~~~l 143 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVD-----M----------GPYGGGQAEYLRVPYADFNLLKL 143 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccc-----c----------CCCCCeeeeEEEeecccCcEEEC
Confidence 9999999999999999999999999754321 0011100 0 0012499999999975 89999
Q ss_pred CCCCCcc---cccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC
Q 016660 171 DPTVPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (385)
Q Consensus 171 P~~l~~~---~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~ 247 (385)
|++++++ .++.+.+.+.|||+++ ..+++.++++|||.|+|++|++++|+|+++|+++|+++++++++.++++++|+
T Consensus 144 P~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~ 222 (375)
T cd08282 144 PDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA 222 (375)
T ss_pred CCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC
Confidence 9999998 5677888999999987 77889999999999889999999999999998678889999999999999998
Q ss_pred CeEEeCCCCCchhHHHHhhCCCccEEEEccCChH-----------HHHHHHHHhccCCceEEEeccCCCC----------
Q 016660 248 TEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS-----------LVQEAYACCRKGWGKTIVLGVDQPG---------- 306 (385)
Q Consensus 248 ~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~---------- 306 (385)
..+++++......+.+++++++|++|||+|+.. ++..++++++++ |+++.+|.....
T Consensus 223 -~~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~ 300 (375)
T cd08282 223 -IPIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAK 300 (375)
T ss_pred -eEeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccccc
Confidence 456776644555566666667999999999763 488999999997 999988764311
Q ss_pred -CcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 307 -SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 307 -~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
....++...++.++..+.+... ...+.+..++++++++.+.+.+++++.|++++++++++.+.++...|+|+++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 301 QGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred CccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 1133455566667777766532 1235788899999999888766688999999999999999888755998753
No 53
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.1e-42 Score=323.69 Aligned_cols=310 Identities=18% Similarity=0.190 Sum_probs=255.3
Q ss_pred eeEEEeccCCCC-----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCC
Q 016660 17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (385)
Q Consensus 17 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 90 (385)
|||+++.+++.| +++.++|.|.|+++||+|||.++++|++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 689999988853 778899999999999999999999999999998887643 45688999999999999999999
Q ss_pred C-CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEE
Q 016660 91 G-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (385)
Q Consensus 91 ~-~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~ 169 (385)
+ |++||+|+..+. .+ |+|+||+.++++.+++
T Consensus 81 ~~~~vGd~V~~~~~-----------------------------~~-------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG-----------------------------SY-------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC-----------------------------CC-------------------CcchheeeecHHHeEE
Confidence 6 999999974310 01 3899999999999999
Q ss_pred CCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEE-c-CCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC
Q 016660 170 VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-G-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV 247 (385)
Q Consensus 170 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~-G-~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~ 247 (385)
+|+++++++++++++.+.|||. +...... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++.++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 9999999999988888999975 4455555 55566665 4 59999999999999999 79999899999999999999
Q ss_pred CeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEe
Q 016660 248 TEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGS 326 (385)
Q Consensus 248 ~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~ 326 (385)
++++++++.++...+++++.+ ++|++||++|+.. ....+++++++ |+++.+|.........++...++.+++++.++
T Consensus 190 ~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08291 190 EYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGF 267 (324)
T ss_pred cEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEE
Confidence 999998876666667888877 8999999999877 67789999997 99999986532222235556677789999998
Q ss_pred eecCCCC---CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 327 LFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 327 ~~~~~~~---~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
....+.. .+++.+++++++ + .+++++++.|+|+++.+|++.+++++. +|++|.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 268 WLTTWLQKLGPEVVKKLKKLVK-T--ELKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EHHHhhcccCHHHHHHHHHHHh-C--ccccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 7654321 245777888887 6 455678899999999999999988665 698873
No 54
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=2e-41 Score=321.53 Aligned_cols=339 Identities=26% Similarity=0.395 Sum_probs=280.5
Q ss_pred eeEEEeccCCCCcEEEEeecCCCC-CCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++ .+++.++|+|.|. ++||+|||.++++|+.|+....+.+. ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6799998875 4999999999985 99999999999999999998887664 3447789999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC--ceEECCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA--HVVKVDPT 173 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~--~~~~iP~~ 173 (385)
|+|+..+..+|+.|.+|+.+..++|..... .|.. + .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~-------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYA--G-------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccc--c-------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 999999999999999999999999975432 1110 0 00012499999999865 99999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++++++.+++++.|||+++. ..++.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. +++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999874 47889999999998899999999999999975788888888999999999975 4666
Q ss_pred CCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 254 KNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
+...+...+.+++++ ++|++||++++...+..++++++++ |+++.+|.... ..........+.+++++.+.. ..
T Consensus 219 ~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---~~ 293 (344)
T cd08284 219 EDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFGR---CP 293 (344)
T ss_pred CCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEec---CC
Confidence 654455557777776 8999999999877799999999997 99999997542 233444555667888887552 12
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEE
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 382 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~ 382 (385)
..+.+.+++++++++.+.+.+++++.+++++++++++.+.+++.+|+|++
T Consensus 294 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 294 VRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred cchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 34678999999999988776667789999999999998887666788875
No 55
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2e-41 Score=321.48 Aligned_cols=337 Identities=28% Similarity=0.418 Sum_probs=284.0
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++. +.+.+.+.|++.+++|+|||.++++|+.|+.+..+.+.....|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 58999998875 99999999999999999999999999999998887664334577899999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCc-----eEECC
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH-----VVKVD 171 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~-----~~~iP 171 (385)
+|+..++.+|+.|++|..++.++|....+ .|.... |+|++|+.++.++ ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYD-------------------GGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---eccCCC-------------------CcceeeEEecccccccccEEECC
Confidence 99999999999999999999999976543 233233 3999999999998 99999
Q ss_pred CCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 172 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
+++++.+|+++ +++.|||+++. ..+++++++|||+|+|.+|++++|+|+..|++.|+++.+++++.+.++++|+++++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999999876 68889999874 45899999999998899999999999999994488888899999999999999999
Q ss_pred eCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecC
Q 016660 252 NSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 330 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 330 (385)
++++..+...+.+.+++ ++|++||++++...+..++++++++ |+++.+|.........++...+..+++.+.+.....
T Consensus 216 ~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 294 (343)
T cd08235 216 DAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS 294 (343)
T ss_pred cCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC
Confidence 98876665667777777 7999999999876689999999997 999999865433334455566667788887764322
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEE
Q 016660 331 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 382 (385)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~ 382 (385)
.+.+.+++++++++.+.+.+.+...++++++.++++.+.+++.+|+|+.
T Consensus 295 ---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 295 ---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred ---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 3578889999999987765556788999999999999988774488863
No 56
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=9.7e-42 Score=322.45 Aligned_cols=331 Identities=26% Similarity=0.373 Sum_probs=278.1
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.++++++++.+.|.|.+.++||+||++++++|+.|+....|.++...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 68999999998899999999999999999999999999999998888765556678999999999999999998899999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|++.+..+|+.|.+|..+..++|..... +|...+| +|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCH
Confidence 99999888999999999999999976543 3333334 9999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
.+++.+++.+.+||+++... .+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.++++ ++++++++
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987555 8899999999998 9999999999999999 788888899999999888 77777665
Q ss_pred CCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCC
Q 016660 256 CGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 335 (385)
Q Consensus 256 ~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 335 (385)
.....++++ +++|++||++|+.. +..++++++++ |+++.+|.......+.......+.+++++.+... ..++
T Consensus 215 -~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 286 (334)
T PRK13771 215 -KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---ATKR 286 (334)
T ss_pred -hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CCHH
Confidence 233335554 37999999999865 88999999997 9999999754322222334344567888887642 2246
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 336 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 336 ~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
++.+++++++++.+. +++++.|+++++++|++.+.+++. +|+++.+
T Consensus 287 ~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 287 DVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 788999999999665 347789999999999999987665 5988865
No 57
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=3.5e-41 Score=319.09 Aligned_cols=334 Identities=29% Similarity=0.503 Sum_probs=281.8
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||++++.++. +++.+.|.|.+.++||+|||.++++|+.|+....+.++...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999998875 99999999999999999999999999999999888765555688999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|+..+..+|+.|..|..+..++|..... .+... .|+|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------------~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVHR-------------------DGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeecC-------------------CCcceeEEEechh-eEECCCCCCH
Confidence 99998888999999999999999953221 12111 2499999999999 9999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
++++++ ..+.++++++ ...++.++++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.++++++|+++++++++.
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~ 213 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDE 213 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCccc
Confidence 999887 4777888866 77889999999999889999999999999999 78888889999999999999999998875
Q ss_pred CchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCC
Q 016660 257 GDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 335 (385)
Q Consensus 257 ~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 335 (385)
.....+.+++++ ++|++||++|+...+..++++++++ |+++.+|... ....++...+..+++++.+.. ....+
T Consensus 214 ~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~ 287 (337)
T cd08261 214 DVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSR---NATRE 287 (337)
T ss_pred CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEec---cCChh
Confidence 555557777776 7999999999877789999999997 9999998653 234455556666788888763 22345
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC-e-eEEEEEe
Q 016660 336 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C-LRCVIWM 383 (385)
Q Consensus 336 ~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~-~-~k~vi~~ 383 (385)
.+.+++++++++.+.+.+.+...++++++.++++.+.+++ . +|+|+++
T Consensus 288 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 288 DFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 7888999999998776434678999999999999998873 4 5999864
No 58
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=3e-41 Score=322.79 Aligned_cols=335 Identities=27% Similarity=0.446 Sum_probs=269.2
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---CCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
+++.++.+++. +++.+.+.|.|.++||+|||.++++|++|++.+.+... ...+|.++|||++|+|+++|+++++|+
T Consensus 18 ~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
T PLN02702 18 NMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLV 96 (364)
T ss_pred cceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCC
Confidence 44455555655 89999999999999999999999999999998876321 123577899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|++.+..+|+.|..|+++..++|....+ ++... ..|+|++|+.++.+.++++|++
T Consensus 97 ~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~------------------~~g~~~~y~~v~~~~~~~~P~~ 155 (364)
T PLN02702 97 VGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPP------------------VHGSLANQVVHPADLCFKLPEN 155 (364)
T ss_pred CCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCC------------------CCCcccceEEcchHHeEECCCC
Confidence 99999999999999999999999999975332 11110 1249999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++.++++.. ++.++|+++ ...++.++++|||+|+|++|++++++|+.+|++.|+++++++++.++++++|++.++++
T Consensus 156 l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 233 (364)
T PLN02702 156 VSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV 233 (364)
T ss_pred CCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEec
Confidence 9999887632 444577766 67789999999999999999999999999999778889889999999999999988765
Q ss_pred C--CCCchhHHHHh---hCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeee
Q 016660 254 K--NCGDKSIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 328 (385)
Q Consensus 254 ~--~~~~~~~i~~~---~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 328 (385)
. +......+..+ ..+++|++||++|+...+..++++++++ |+++.+|.... ...+....+..+++++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 234 STNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred CcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEecc
Confidence 3 22333334443 2337999999999877799999999997 99999996532 234455567778999988753
Q ss_pred cCCCCCCcHHHHHHHHHcCCCCCCCceeeeeec--chHHHHHHHHhcCCe-eEEEEE
Q 016660 329 GGLKAKSDIPILLKRYMDKELELDKFVTHEMKF--EEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
. ...+..++++++++.+.+.+++++.|++ +++++|++.+.+++. +|++|.
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 2578889999999988776667788665 799999999887765 599885
No 59
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.1e-41 Score=325.87 Aligned_cols=335 Identities=22% Similarity=0.351 Sum_probs=273.5
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC------C-CCCCCccccCceeEEEEEeCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD------F-PAVFPRILGHEAIGVVESVGENV 89 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~vG~~v 89 (385)
+.+.++..+ ++++.+.|.|.+++++|+|||.++++|++|++.+.+.. + ...+|.++|||++|+|+++|+++
T Consensus 29 ~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v 106 (384)
T cd08265 29 LGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV 106 (384)
T ss_pred ceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence 445555544 39999999999999999999999999999998876321 1 13457899999999999999999
Q ss_pred CCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEE
Q 016660 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVK 169 (385)
Q Consensus 90 ~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~ 169 (385)
+.|++||+|++.+..+|+.|++|.++.+++|..... .|...+| +|++|+.++.+.+++
T Consensus 107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~~~ 164 (384)
T cd08265 107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHeEE
Confidence 999999999999999999999999999999975432 3333333 999999999999999
Q ss_pred CCCCC-------Ccccccccccchhhhhhhhhhh-ccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHH
Q 016660 170 VDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (385)
Q Consensus 170 iP~~l-------~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~ 241 (385)
+|+++ ++. +|++..++.|||+++... .+++++++|||+|+|++|++++++|+.+|+.+|+++++++++.++
T Consensus 165 lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~ 243 (384)
T cd08265 165 INELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNL 243 (384)
T ss_pred CCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 99864 344 556666889999988665 689999999999889999999999999999779999888999999
Q ss_pred HHHcCCCeEEeCCCC---CchhHHHHhhCC-CccEEEEccCCh-HHHHHHHHHhccCCceEEEeccCCCCCcccccHHHH
Q 016660 242 GKRFGVTEFVNSKNC---GDKSIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEV 316 (385)
Q Consensus 242 ~~~lg~~~vv~~~~~---~~~~~i~~~~~g-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~ 316 (385)
++++|+++++++++. .+...+++++.+ ++|+|+|++|.. ..+..++++++++ |+++.+|.... ..++.+..+
T Consensus 244 ~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~ 320 (384)
T cd08265 244 AKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVL 320 (384)
T ss_pred HHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHH
Confidence 999999999988753 344457788877 899999999974 4578999999997 99999986532 344455556
Q ss_pred hhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 016660 317 LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 381 (385)
Q Consensus 317 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi 381 (385)
..+..++.+.+.... ...+.+++++++++.+.+.+++++.|+++++++|++.+.++..+|+++
T Consensus 321 ~~~~~~l~~~~~~~~--~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 321 QVRRAQIVGAQGHSG--HGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hhCceEEEEeeccCC--cchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 666778887753222 346899999999998877666778999999999999977766568775
No 60
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.1e-41 Score=318.74 Aligned_cols=332 Identities=30% Similarity=0.485 Sum_probs=274.8
Q ss_pred EEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-C--CCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 19 AAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-F--PAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 19 a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|+++.++.. +++.+.|.|.|.++||+|||.++++|+.|++.+.+.. . ...+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467788865 9999999999999999999999999999998764221 1 12357789999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
|+|++.+..+|+.|++|+.+.+++|.+..+. ...... |+|++|++++++.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVD-------------------GTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCC-------------------CceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999753220 000112 3999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
+++|+.+ .++.+||+++ +..+++++++|||.|+|++|++++|+|+.+|+++|+++.+++++.++++++|+++++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 4788999875 7889999999999988999999999999999955899988999999999999999998887
Q ss_pred CCc---hhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 256 CGD---KSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 256 ~~~---~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
... ...+.+.+.+ ++|++|||+|+...++.++++++++ |+++.+|.... ...+++..+..+++.+.++...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 291 (343)
T cd05285 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKP--EVTLPLSAASLREIDIRGVFRY-- 291 (343)
T ss_pred ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHhhCCcEEEEeccC--
Confidence 543 4446677776 7999999999876689999999997 99999986432 2344555566678888876422
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC--eeEEEE
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLRCVI 381 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~--~~k~vi 381 (385)
.+.+.+++++++++.+.+.+++.+.++++++.+|++.+.+++ .+|++|
T Consensus 292 --~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 --ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred --hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 267888999999998765555778999999999999998875 379987
No 61
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.8e-41 Score=317.98 Aligned_cols=334 Identities=30% Similarity=0.456 Sum_probs=285.4
Q ss_pred eeEEEeccCCCC-cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 17 CRAAIATAPGEP-LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 17 ~~a~~~~~~~~~-l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
||++++..++.+ +.+.+.|.|.+.+++|+|||.++++|+.|+....+.+. ...+|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 689999999987 68888899999999999999999999999998888765 2345778999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|+.++..+|+.|.+|+.++.+.|..... .|...+| +|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCCC
Confidence 9999999999999999999999999965443 3444444 99999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
++.+++.++.++.|||+++.....++++++|||.|+|.+|++++++|+..|+ +|+++++++++.+.++++|++++++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999988777889999999999889999999999999999 799999999999999999999988877
Q ss_pred CCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 255 NCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 255 ~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
+......+ ..+.+ ++|+++|++|....+..++++++++ |+++.+|... ....++...++.++.++.+++.. .
T Consensus 218 ~~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~---~ 290 (338)
T cd08254 218 DDSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGR--DKLTVDLSDLIARELRIIGSFGG---T 290 (338)
T ss_pred CcCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCC--CCCccCHHHHhhCccEEEEeccC---C
Confidence 64444435 45555 8999999999887799999999997 9999998653 23345556677788888886422 2
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.+.+..++++++++.+.+. .+.++++++.++++.+.+++. +|+++++
T Consensus 291 ~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 291 PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 4678889999999977754 478999999999999988775 4988864
No 62
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=6.3e-41 Score=317.40 Aligned_cols=333 Identities=26% Similarity=0.374 Sum_probs=276.3
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++....+++.|.|++.++||+|||.++++|++|++.+.+.++. ..|.++|||++|+|+++|+++++|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999998874448999999999999999999999999999988776543 2367899999999999999999999999
Q ss_pred EEEecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 97 VVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 97 rV~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
+|++.+ ..+|+.|.+|..+..++|..... .|+..+| +|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCC
Confidence 998755 56799999999999999975542 3444444 999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~-~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
+.+++.+++.+.|||+++ ..++++++++|||+|+|++|++++++|+. .|+ +|+++++++++.+.++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999987 77889999999999999999999999998 599 899999999999999999999999876
Q ss_pred C-CCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 255 N-CGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 255 ~-~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
+ ......+++.++ ++|+++++.++...+..++++++.+ |+++.+|... ...+++...+..++..+.++.+..
T Consensus 216 ~~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~--- 288 (338)
T PRK09422 216 RVEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP--ESMDLSIPRLVLDGIEVVGSLVGT--- 288 (338)
T ss_pred ccccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC--CCceecHHHHhhcCcEEEEecCCC---
Confidence 4 233344565555 6896665666667799999999997 9999998653 234455556666788887764322
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
.+++..++++++++.+.+ .+ ..++++++++|++.+.++.. +|+++...
T Consensus 289 ~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 289 RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 357888999999997653 35 46899999999999988776 49998764
No 63
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.8e-42 Score=317.91 Aligned_cols=270 Identities=20% Similarity=0.325 Sum_probs=226.2
Q ss_pred cccCceeEEEEEeCCCCC------CCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCce
Q 016660 73 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 146 (385)
Q Consensus 73 ~~G~e~~G~V~~vG~~v~------~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 146 (385)
++|||++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.+++++|....+ +|....+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~----------- 66 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALD----------- 66 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCccccc-----------
Confidence 589999999999999999 89999999999999999999999999999987554 2222100
Q ss_pred eeccccccceeeeEeeccC-ceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcC
Q 016660 147 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 225 (385)
Q Consensus 147 ~~~~~~~g~~~~~v~v~~~-~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G 225 (385)
......|+|+||+.++++ .++++|+++++++++.+++.+.|+|+++ +.....++++|||+|+|++|++++|+||.+|
T Consensus 67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 000112499999999987 7999999999999999999999999976 4455679999999999999999999999999
Q ss_pred CCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCC
Q 016660 226 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 226 ~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
+++|++++++++|.++++++|++.++++++ ....+.+++.+ ++|++||++|.+..++.++++++++ |+++.+|...
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~ 221 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSVF 221 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccCC
Confidence 966999988999999999999999988765 33446667766 8999999999988899999999997 9999999754
Q ss_pred CCCcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHc--CCCCCCCceeeeeecchH
Q 016660 305 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD--KELELDKFVTHEMKFEEI 364 (385)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~i~~~~~l~~~ 364 (385)
.....+++...++.|++++.|+.... .++++++++++.+ +++++++++++.|+|+++
T Consensus 222 ~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 222 PGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 33446777888889999999985322 3679999999997 467777889999999874
No 64
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=4e-41 Score=318.62 Aligned_cols=335 Identities=22% Similarity=0.356 Sum_probs=277.9
Q ss_pred eEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCCE
Q 016660 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (385)
Q Consensus 18 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gdr 97 (385)
|+++.+.++..+++.+++.|+|.++||+|||.++++|++|++.+.+.+....+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57888888877999999999999999999999999999999998887655566889999999999999999999999999
Q ss_pred EE-ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 98 VI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 98 V~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
|+ ......|+.|.+|.++..++|....+. +.|....+ ....|+|+||+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVT-YNGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhc-ccccccCC--------------CcCCCcceeEEEechhheEECCCCCCH
Confidence 97 444568999999999999999765431 01111101 122349999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
++++.+.+.+.|||+++ +...++++++|+|.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++.++.
T Consensus 146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~ 223 (337)
T cd05283 146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP 223 (337)
T ss_pred HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcch
Confidence 99999999999999976 44568999999998889999999999999999 89999888999999999999999887652
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCc
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSD 336 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 336 (385)
.. ... ..+++|++|||+|....+..++++++++ |+++.+|.... ...+++..++.+++++.+..... .++
T Consensus 224 ~~---~~~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~~~ 293 (337)
T cd05283 224 EA---MKK-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEE--PLPVPPFPLIFGRKSVAGSLIGG---RKE 293 (337)
T ss_pred hh---hhh-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCC--CCccCHHHHhcCceEEEEecccC---HHH
Confidence 22 111 2347999999999886689999999997 99999997532 23556666677899999986543 367
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 337 IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 337 ~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
+.+++++++++++++ .+ +.|+++++++||+.+.+++. +|+|++
T Consensus 294 ~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 294 TQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 889999999997654 34 78999999999999998876 598874
No 65
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=5.7e-41 Score=324.35 Aligned_cols=342 Identities=21% Similarity=0.230 Sum_probs=276.9
Q ss_pred CCeeeeEEEecc--CCC---CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC----------CCCCC-ccccC
Q 016660 13 KPIQCRAAIATA--PGE---PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF----------PAVFP-RILGH 76 (385)
Q Consensus 13 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~----------~~~~p-~~~G~ 76 (385)
.+.+|||+++.. ++. .+++.+.|.|.|.+++|+||+.++++|++|++...+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 356799999965 443 388999999999999999999999999999876655321 00123 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccce
Q 016660 77 EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF 156 (385)
Q Consensus 77 e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~ 156 (385)
|++|+|+++|++++.|++||+|++.+...|+.|++|+.+.+++|..... +|.. ...|+|
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~------------------~~~g~~ 142 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYE------------------TNFGSF 142 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---cccc------------------CCCccc
Confidence 9999999999999999999999999999999999999999999954321 2211 112499
Q ss_pred eeeEeeccCceEECCCCCCcccccccccchhhhhhhhhh--hccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 016660 157 SEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (385)
Q Consensus 157 ~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~--~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~ 233 (385)
++|+.++.+.++++|+++++++++.+.+++.|||+++.. ..++.++++|+|+|+ |++|++++++|+.+|+ ++++++
T Consensus 143 ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~ 221 (398)
T TIGR01751 143 AEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVV 221 (398)
T ss_pred eEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEc
Confidence 999999999999999999999999999999999998754 467899999999997 9999999999999999 677777
Q ss_pred CCchHHHHHHHcCCCeEEeCCCCC----------------------chhHHHHhhCC-CccEEEEccCChHHHHHHHHHh
Q 016660 234 VISEKFEIGKRFGVTEFVNSKNCG----------------------DKSIIIDMTDG-GADYCFECVGLASLVQEAYACC 290 (385)
Q Consensus 234 ~~~~~~~~~~~lg~~~vv~~~~~~----------------------~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l 290 (385)
+++++.+.++++|++.++|+++.+ +...+.+++++ ++|++|||+|... +..+++++
T Consensus 222 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l 300 (398)
T TIGR01751 222 SSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVC 300 (398)
T ss_pred CCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhh
Confidence 889999999999999999876521 11225566766 8999999999754 88999999
Q ss_pred ccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHH
Q 016660 291 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 370 (385)
Q Consensus 291 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~ 370 (385)
+++ |+++.+|... .....++...++.++.++.++..... .++.+++++++++.+.+ .+++.+++++++++++.
T Consensus 301 ~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~ 373 (398)
T TIGR01751 301 RRG-GMVVICGGTT-GYNHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQD 373 (398)
T ss_pred ccC-CEEEEEcccc-CCCCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHH
Confidence 997 9999999754 22245555566667888887754332 45788999999997664 37789999999999999
Q ss_pred HhcCCe-eEEEEEeC
Q 016660 371 LIKGKC-LRCVIWMG 384 (385)
Q Consensus 371 l~~~~~-~k~vi~~~ 384 (385)
+.+++. +|+|+++.
T Consensus 374 ~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 374 VHRNHHQGNVAVLVL 388 (398)
T ss_pred HHcCCCCceEEEEeC
Confidence 987775 49998763
No 66
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.6e-40 Score=313.64 Aligned_cols=324 Identities=22% Similarity=0.324 Sum_probs=263.7
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-----------CCCCCccccCceeEEEEEe
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-----------PAVFPRILGHEAIGVVESV 85 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~v 85 (385)
|||+++.++ ++++.+.|.|++.+++|+|||.++++|+.|+....|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689999876 599999999999999999999999999999998877321 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeecc
Q 016660 86 GENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI 164 (385)
Q Consensus 86 G~~v~~-~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~ 164 (385)
|+++++ |++||+|+..+...|+.|+.|..+.. ... .|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-------------~~~-------------------~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-------------PEA-------------------PGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-------------cCC-------------------CCceeeeEEech
Confidence 999997 99999999999999999999932211 011 239999999999
Q ss_pred CceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH
Q 016660 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (385)
Q Consensus 165 ~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 244 (385)
+.++++|+++++++++ +++++.+||++ ....+++++++|||+|+|++|++++|+|+.+|++.++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999877 56688899987 477889999999999889999999999999999778888888999999999
Q ss_pred cCCCeEEeCCCCCchh---HHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcC
Q 016660 245 FGVTEFVNSKNCGDKS---IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSG 320 (385)
Q Consensus 245 lg~~~vv~~~~~~~~~---~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 320 (385)
+|+++++++++..... .+...+.+ ++|++||++|+...+..++++++++ |+++.+|...... .+.....+.++
T Consensus 205 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~~~~ 281 (341)
T cd08262 205 MGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESD--NIEPALAIRKE 281 (341)
T ss_pred cCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCC--ccCHHHHhhcc
Confidence 9999999887642211 23444555 8999999999865688999999997 9999998753222 22322334567
Q ss_pred cEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 321 KILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 321 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
+++.+... . ..+.+.+++++++++.+.+.+++++.|++++++++++.+.+++. +|+|++
T Consensus 282 ~~~~~~~~--~-~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 282 LTLQFSLG--Y-TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred eEEEEEec--c-cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 77775532 1 23478889999999988877677899999999999999988765 488874
No 67
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.7e-40 Score=312.83 Aligned_cols=337 Identities=26% Similarity=0.456 Sum_probs=280.2
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++++++. +.+.+.|.|++.++||+||+.++++|+.|+....+.+. ...|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999999876 99999999999999999999999999999998877652 24577899999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|...+...|+.|++|..+....|..... +|.... |+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRD-------------------GAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---EecccC-------------------CcccceEEechHHeEECcCCCCH
Confidence 99999988999999999999999976442 332233 39999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
++++++ ..+.|||+++. ...+.++++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.++++++.
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~ 214 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEE 214 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccc
Confidence 999888 57889999874 7789999999999889999999999999999559999888899999999999999998875
Q ss_pred CchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcc-cccHHHHhhcCcEEEEeeecCCC--
Q 016660 257 GDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVLHSGKILMGSLFGGLK-- 332 (385)
Q Consensus 257 ~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~-- 332 (385)
. ...+....++ ++|++|||+|....+..++++++++ |+++.+|.......+ ..+...++.++.++.++......
T Consensus 215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (343)
T cd08236 215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF 292 (343)
T ss_pred c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc
Confidence 5 5557777776 7999999999877789999999997 999999865422112 22344556778999888653321
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhc-CCe-eEEEE
Q 016660 333 AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKC-LRCVI 381 (385)
Q Consensus 333 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~-~~~-~k~vi 381 (385)
..+.+.+++++++++.+.+.+++.+.+++++++++++.+.+ +.. +|+|+
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 293 PGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred chhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 13567888999999987654556789999999999999987 444 47764
No 68
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.1e-40 Score=311.32 Aligned_cols=332 Identities=28% Similarity=0.495 Sum_probs=279.1
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++.+++. +++.+.|.|++.++||+|||.++++|+.|+....|.++. .+|.++|+|++|+|+++|+++++|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998885 999999999999999999999999999999988887643 3678999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|+..+...|+.|.+|..++.++|..... .|....| +|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCH
Confidence 99999999999999999999998875432 2222233 9999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
.+++.+ +.+.++++++ ..+++.++++|||+|+|.+|++++++|+..|+++|+++++++++.+.++++|++.++++++.
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 214 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE 214 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC
Confidence 998876 6788899877 77899999999999889999999999999999558888889999999999999888887764
Q ss_pred CchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCC
Q 016660 257 GDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 335 (385)
Q Consensus 257 ~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 335 (385)
..... +.+.+ ++|++||++|....+..++++++++ |+++.+|........++....++.+++++.+.... .+
T Consensus 215 ~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 287 (334)
T cd08234 215 DPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PY 287 (334)
T ss_pred CHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HH
Confidence 33332 44444 8999999999877789999999997 99999987543334555555556678888887532 25
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEE
Q 016660 336 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 381 (385)
Q Consensus 336 ~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi 381 (385)
.+.+++++++++.+.+.+++++.+++++++++++.+.+...+|+++
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 333 (334)
T cd08234 288 TFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV 333 (334)
T ss_pred HHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence 6888999999998877666778999999999999998833458876
No 69
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.2e-40 Score=312.98 Aligned_cols=336 Identities=26% Similarity=0.417 Sum_probs=273.8
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC---CCCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++..++..+++.+.|.|.|.++||+|||.++++|+.|+.++.+.. ....+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899999888669999999999999999999999999999988754421 1223567899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+..+..+|+.|++|..+.+++|....+ .|.... |+|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDTD-------------------GCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccce---EeccCC-------------------CcceEEEEechHHcEECcCC
Confidence 99999999989999999999999999964322 222222 48999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
++++.+ ++..++.++++++. ....++++|||.|+|.+|++++|+|+.+|+++|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998544 55567788887654 355789999999889999999999999998668888888899999999999999988
Q ss_pred CCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHH-HHhhcCcEEEEeeecCC
Q 016660 254 KNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGL 331 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~ 331 (385)
++.+.. .+.+++++ ++|++||++|+...+..++++++++ |+++.+|.... ...+++. .+..+++.+.+.....
T Consensus 216 ~~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~- 290 (341)
T cd05281 216 REEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPG--PVDIDLNNLVIFKGLTVQGITGRK- 290 (341)
T ss_pred ccccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC--CcccccchhhhccceEEEEEecCC-
Confidence 765565 67777776 8999999999887789999999997 99999986542 2222222 2555678887764222
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
..+.+.+++++++++.+.+.+++.+.+++++++++|+.+.+++.+|+++++
T Consensus 291 -~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 291 -MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred -cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 235678899999999887766677889999999999999887745998863
No 70
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.1e-40 Score=314.52 Aligned_cols=316 Identities=18% Similarity=0.202 Sum_probs=249.8
Q ss_pred CCeeeeEEEeccCC-C-C----cEEEEe---ecCC-CCCCeEEEEEeeeecccccccccccCCCCCCCCccccC--ceeE
Q 016660 13 KPIQCRAAIATAPG-E-P----LVIDEV---IVDP-PNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGH--EAIG 80 (385)
Q Consensus 13 ~~~~~~a~~~~~~~-~-~----l~~~~~---~~p~-~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G 80 (385)
..++.|.|++...- + | +++.+. +.|. +++|||||||.|+++|+.|...+.+.......|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 34557888874422 1 1 777763 5653 47999999999999999988654432222235789998 8899
Q ss_pred EEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeE
Q 016660 81 VVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYT 160 (385)
Q Consensus 81 ~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v 160 (385)
+|+.+|+++++|++||+|... |+|+||+
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~ 112 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS 112 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence 999999999999999999521 2799999
Q ss_pred eeccCc--eEE--CCCCCCcc-cccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 016660 161 VLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV 234 (385)
Q Consensus 161 ~v~~~~--~~~--iP~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~ 234 (385)
.++.+. +++ +|++++++ +||++++++.|||+++.+..+++++++|||+|+ |++|++++|+||.+|+ +|+++++
T Consensus 113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~ 191 (348)
T PLN03154 113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 191 (348)
T ss_pred EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence 998753 544 59999986 688999999999999878888999999999998 9999999999999999 7999988
Q ss_pred CchHHHHHH-HcCCCeEEeCCCC-CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCC-cc--
Q 016660 235 ISEKFEIGK-RFGVTEFVNSKNC-GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS-QL-- 309 (385)
Q Consensus 235 ~~~~~~~~~-~lg~~~vv~~~~~-~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~-- 309 (385)
++++.++++ ++|+++++++++. +....+++.+++++|++||++|+. .+..++++++++ |+++.+|...... ..
T Consensus 192 ~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~ 269 (348)
T PLN03154 192 SSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLNSLSASQ 269 (348)
T ss_pred CHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccCCCCCCC
Confidence 999999987 7999999998753 444446666655899999999976 489999999997 9999999753221 00
Q ss_pred -cccHHHHhhcCcEEEEeeecCCC--CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeCC
Q 016660 310 -SLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMGE 385 (385)
Q Consensus 310 -~~~~~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~~ 385 (385)
.++...++.+++++.|++...+. ..+.+.++++++++|++.+ .++..|+|+++++|++.+++++. +|+||++.+
T Consensus 270 ~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 270 GIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred CcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 12455677889999998644321 1245778999999997765 36678999999999999998876 599998753
No 71
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7.4e-40 Score=310.49 Aligned_cols=335 Identities=28% Similarity=0.439 Sum_probs=283.6
Q ss_pred eeEEEeccCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
|||+++.+++ ..+++.+++.|.|.+++|+|||.++++|+.|+....+.++. ...|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 6899999887 34999999999999999999999999999999988776542 334668899999999999999999999
Q ss_pred CCEEEecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 95 GDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 95 GdrV~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
||+|+..+ ..+|+.|.+|..+..++|....+ .|+...| +|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCC
Confidence 99998776 67799999999999999976544 3333334 8999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998755 58999999999997 7799999999999999 8999989999999999999999999
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
+++.++...+.+++++ ++|+++|+.++...+..++++++.+ |+++.+|... ....+++...++.+++++.+.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (341)
T cd08297 217 FKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVGT- 293 (341)
T ss_pred CCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccCC-
Confidence 8875555557777766 8999999888777799999999997 9999998653 2334566666678899998864332
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.+.++.++++++++.+.+ .+ ..|+++++.++++.+..+.. +|+++++
T Consensus 294 --~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 294 --RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred --HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 367888999999997754 34 67999999999999987765 4999875
No 72
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=7.5e-40 Score=308.94 Aligned_cols=330 Identities=31% Similarity=0.474 Sum_probs=274.4
Q ss_pred eeEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGD 96 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 96 (385)
|||+++..+++++.+.+.|.|.+.+++|+|||.++++|+.|++...|.++....|.++|||++|+|+++|+++++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999987666699999999999999999999999999999999888765555678999999999999999999999999
Q ss_pred EEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 97 VVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 97 rV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
+|+..+...|+.|.+|+.+..++|.... .+|....| +|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG-------------------GFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC-------------------eeeeEEEechhheEECCCCCCH
Confidence 9999999999999999999999997642 24433334 9999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN 255 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~ 255 (385)
++++.+++++.|||+++.. ..+.+++++||+|+ |.+|++++++|+..|+ .|+++.+++++.+.++++|++.+++.++
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999998766 88999999999997 9999999999999999 7888888888999999999988886654
Q ss_pred CCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCC
Q 016660 256 CGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 335 (385)
Q Consensus 256 ~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 335 (385)
....+.+.. ++|+++|++|... ...++++++++ |+++.+|..... ...+.......++..+.+... ...+
T Consensus 217 --~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~ 286 (332)
T cd08259 217 --FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSIS---ATKA 286 (332)
T ss_pred --HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecC---CCHH
Confidence 333344433 7999999999877 88999999997 999999875322 122233333456777776631 2235
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 336 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 336 ~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
++.+++++++++.+. +++++.++++++.+||+.+.+++. +|++++
T Consensus 287 ~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 287 DVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 788899999999665 347789999999999999988775 488763
No 73
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=7.7e-40 Score=310.13 Aligned_cols=332 Identities=25% Similarity=0.389 Sum_probs=268.5
Q ss_pred EeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccc-cCCCC--CCCCccccCceeEEEEEeCCCCCCCCCCCE
Q 016660 21 IATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWK-MKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (385)
Q Consensus 21 ~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~-g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gdr 97 (385)
++++++. +++++.|.|.+.++||+|||.++++|++|+...+ +.+.. ..+|.++|+|++|+|+++|+++++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 5677766 9999999999999999999999999999998764 32211 235778999999999999999999999999
Q ss_pred EEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcc
Q 016660 98 VIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPN 177 (385)
Q Consensus 98 V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~ 177 (385)
|++.+..+|+.|.+|..|..++|....+ ++.... .....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~--------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMR--------------FPHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeeccc--------------cCCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999999999999999999999986432 111000 00012499999999999999999999999
Q ss_pred cccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCC
Q 016660 178 RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257 (385)
Q Consensus 178 ~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~ 257 (385)
+|+. ..+++|||+++.....+ ++++|||.|+|.+|++++|+|+.+|+++|+++++++++.++++++|+++++++++..
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~ 221 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP 221 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh
Confidence 9876 46888999887655555 899999998899999999999999987789998889999999999999999887633
Q ss_pred chhHHHHhhC-C-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCC
Q 016660 258 DKSIIIDMTD-G-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS 335 (385)
Q Consensus 258 ~~~~i~~~~~-g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 335 (385)
+..+.. . ++|++||++|+...++.++++++++ |+++.+|... .....++..++.+++++.+... ..+
T Consensus 222 ----~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~ 290 (339)
T cd08232 222 ----LAAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR----FDD 290 (339)
T ss_pred ----hhhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----CHH
Confidence 223332 2 6999999999876689999999997 9999998643 3344455555667888877642 235
Q ss_pred cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 336 DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 336 ~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.+.+++++++++.+.+.+.+.+.+++++++++++.+.+++. +|+|+++
T Consensus 291 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 291 EFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 78889999999988777767789999999999999977664 5999864
No 74
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3.6e-40 Score=310.22 Aligned_cols=310 Identities=22% Similarity=0.246 Sum_probs=260.7
Q ss_pred eeEEEeccCCCC---cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCccccCceeEEEEEeCCCCCCC
Q 016660 17 CRAAIATAPGEP---LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGV 92 (385)
Q Consensus 17 ~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (385)
|||+++.+++.| +++.++|.|.+.++||+|||.++++|+.|+..+.|.++ ...+|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999888754 77899999999999999999999999999999888764 24568899999999999999999999
Q ss_pred CCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 93 ~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
++||+|+..+ .. |+|++|+.++++.++++|+
T Consensus 81 ~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAP------------------------------VH-------------------GTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEecc------------------------------CC-------------------CcceeEEEEchHHeEECCC
Confidence 9999997431 11 3899999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
++++++++++++.+.|||+++ ...+++++++|||+|+ |.+|++++|+|+.+|+ +++++..++++.+.++++|+++++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999998999999876 5578999999999987 9999999999999999 788887888888888889999999
Q ss_pred eCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecC
Q 016660 252 NSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 330 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 330 (385)
++++.+....+.+++++ ++|++||++|+.. ...++++++++ |+++.+|... .....+++..++.++.++.++....
T Consensus 190 ~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08292 190 STEQPGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWGGR 266 (324)
T ss_pred cCCCchHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEcHH
Confidence 88876666668888887 8999999999875 78999999997 9999998752 3345566666677899999886543
Q ss_pred CC-------CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 331 LK-------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 331 ~~-------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
+. ..+.+.++++++++|.+.+. +.+.|+++++.+|++.+.++.. +|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 267 WSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 21 12357788999999977654 4688999999999999887654 488764
No 75
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2e-39 Score=306.77 Aligned_cols=336 Identities=22% Similarity=0.306 Sum_probs=278.3
Q ss_pred eeEEEeccCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++..++. .+++.+.+.|.+.+++|+||+.++++|++|++.+.|.... ..+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 58999884433 2788888888889999999999999999999988876532 34578899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|++.+...|+.|.+|.++.+++|....+ .|....| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999976443 3433334 8999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++.+++++++.+.+||+++.+...+.++++++|+|+ +.+|++++++++..|+ +|+++++++++.+.++.++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999999999998878888999999999997 7999999999999999 7888888888999888888888887
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
..+......+...+.+ ++|+++|++|... +..++++++++ |+++.+|.... ....++....+.+++++.+.....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 293 (342)
T cd08266 218 YRKEDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTG-YEAPIDLRHVFWRQLSILGSTMGT- 293 (342)
T ss_pred cCChHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCC-CCCCcCHHHHhhcceEEEEEecCC-
Confidence 7664444445666655 8999999999865 88999999997 99999986532 223445445567788888875332
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
...+.+++++++++.+.+ ++++.|++++++++++.+.++.. +|+++++
T Consensus 294 --~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 --KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred --HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 357888899999996553 47789999999999999887665 4888763
No 76
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.2e-39 Score=307.20 Aligned_cols=331 Identities=26% Similarity=0.439 Sum_probs=271.0
Q ss_pred ccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCC---CCCCCCccccCceeEEEEEeCCCCCCCCCCCEEE
Q 016660 23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD---FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99 (385)
Q Consensus 23 ~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~ 99 (385)
.+|++++++.+.|.|.|+++||+|||.++++|+.|+..+.+.. ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 4677789999999999999999999999999999998765431 1123567899999999999999999999999999
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccc
Q 016660 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA 179 (385)
Q Consensus 100 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~a 179 (385)
..+...|+.|..|..+..++|...++ +|.... |+|++|++++++.++++|++++++.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---EeecCC-------------------CcceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999987653 232223 39999999999999999999998654
Q ss_pred cccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCch
Q 016660 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK 259 (385)
Q Consensus 180 a~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~ 259 (385)
+++.++.+|++++ .....++++|+|.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++.+....
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 219 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVV 219 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHH
Confidence 5666888888875 3457789999998889999999999999999558888888889999999999989988775555
Q ss_pred hHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHH-HHhhcCcEEEEeeecCCCCCCcH
Q 016660 260 SIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDI 337 (385)
Q Consensus 260 ~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~ 337 (385)
..+.+++++ ++|++||++|+...+..++++++++ |+++.+|.... ...++.. .++.+++.+.+... ....+.+
T Consensus 220 ~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 294 (340)
T TIGR00692 220 KEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG--KVTIDFTNKVIFKGLTIYGITG--RHMFETW 294 (340)
T ss_pred HHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC--CcccchhhhhhhcceEEEEEec--CCchhhH
Confidence 556677766 8999999999877789999999997 99999987532 2233333 45567778776541 2223467
Q ss_pred HHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCeeEEEEEe
Q 016660 338 PILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 383 (385)
Q Consensus 338 ~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~k~vi~~ 383 (385)
.+++++++++.+.+.+++.+.++++++.++++.+.++..+|+|+++
T Consensus 295 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 295 YTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 8889999999887666678999999999999999877667998864
No 77
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-39 Score=308.89 Aligned_cols=324 Identities=23% Similarity=0.280 Sum_probs=261.0
Q ss_pred eeEEEeccCCCC--cEEEE-eecCCCCCCeEEEEEeeeecccccccccccCCC--------------------CCCCCcc
Q 016660 17 CRAAIATAPGEP--LVIDE-VIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF--------------------PAVFPRI 73 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~--------------------~~~~p~~ 73 (385)
|||+++.+++.+ +.+.+ .+.|.|.+++|+|||.++++|++|+....|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888877643 55554 477788999999999999999999998877542 2346789
Q ss_pred ccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccc
Q 016660 74 LGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSV 153 (385)
Q Consensus 74 ~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~ 153 (385)
+|||++|+|+++|+++++|++||+|++.+..+|+.|..|.. |. . +|...+|
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~---~~~~~~g------------------ 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y---IGSERDG------------------ 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c---cCCCCCc------------------
Confidence 99999999999999999999999999998888888876521 11 0 2222223
Q ss_pred cceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE
Q 016660 154 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (385)
Q Consensus 154 g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~ 232 (385)
+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ...+++++++|||+|+ |++|++++++|+.+|+ +++++
T Consensus 132 -~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 132 -GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred -cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 999999999999999999999999999999999999976 7778999999999998 9999999999999999 67777
Q ss_pred cCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccc
Q 016660 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSL 311 (385)
Q Consensus 233 ~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~ 311 (385)
.+++ +.+.++++|++.+++..... ... ...+.+ ++|++||++|+.. +..++++++++ |+++.+|... .....+
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~~~-~~~-~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~ 282 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDAPL-LAD-AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAIA-GPVVEL 282 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCCcc-HHH-HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEecccC-CccccC
Confidence 6554 88888999998666654422 222 455555 8999999999865 89999999997 9999998642 222456
Q ss_pred cHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 312 SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 312 ~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
+...++.+++++.++.... .+.+.++++++.++.+.+ ++++.++++++.++++.+..+.. +|+++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 283 DLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 6677778899999886432 357888999999997653 46788999999999999987665 4888753
No 78
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.6e-39 Score=306.06 Aligned_cols=318 Identities=25% Similarity=0.342 Sum_probs=262.2
Q ss_pred eeEEEeccCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
||++++.+++ +.+++.+.+.|+++++||+||+.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6899998776 44888888888899999999999999999999887642 222357789999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
|+|++.+..+|+.|.+|+.++.++|....+ +|....| +|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCC
Confidence 999999999999999999999999986543 3333333 999999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
+++++.+++.+.|||+++.. .+++++++|+|+|+ |++|++++++|+.+|+ +|+++. +.++++++|++++++++
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch
Confidence 99999999999999998754 88999999999997 9999999999999999 777775 23677889999998876
Q ss_pred CCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCC
Q 016660 255 NCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK 334 (385)
Q Consensus 255 ~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 334 (385)
+ ....+.+++ +++|+++|++|+. .+..++++++++ |+++.+|... .....++...++.++.++.++..+. +
T Consensus 212 ~--~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (325)
T cd08264 212 E--VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGGT---R 282 (325)
T ss_pred H--HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCCC---H
Confidence 5 233356666 6899999999975 589999999997 9999998642 2335666667777788888875332 3
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe
Q 016660 335 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 376 (385)
Q Consensus 335 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~ 376 (385)
+.+.++++++... .+ .+++.|+++++++|++.+.+++.
T Consensus 283 ~~~~~~~~l~~~~--~~--~~~~~~~~~~~~~a~~~~~~~~~ 320 (325)
T cd08264 283 KELLELVKIAKDL--KV--KVWKTFKLEEAKEALKELFSKER 320 (325)
T ss_pred HHHHHHHHHHHcC--Cc--eeEEEEcHHHHHHHHHHHHcCCC
Confidence 5788888888543 32 35688999999999999887654
No 79
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.6e-39 Score=307.83 Aligned_cols=313 Identities=19% Similarity=0.189 Sum_probs=250.6
Q ss_pred CeeeeEEEeccCCC-CcEEEEeec----CCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCce--eEEEEEe
Q 016660 14 PIQCRAAIATAPGE-PLVIDEVIV----DPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEA--IGVVESV 85 (385)
Q Consensus 14 ~~~~~a~~~~~~~~-~l~~~~~~~----p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~v 85 (385)
...+|++....|.. .+++.+.|+ |+|+++||||||.|++||+.|++...|.... ..+|.++|+++ .|.+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v 84 (338)
T cd08295 5 QVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVV 84 (338)
T ss_pred EEEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEE
Confidence 34577888766664 388999988 7899999999999999999999988875432 34578899754 4566668
Q ss_pred CCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeecc-
Q 016660 86 GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI- 164 (385)
Q Consensus 86 G~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~- 164 (385)
|+++++|++||+|+.. |+|+||+++++
T Consensus 85 ~~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~ 112 (338)
T cd08295 85 DSGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRG 112 (338)
T ss_pred ecCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecch
Confidence 8999999999999521 27999999999
Q ss_pred CceEECC-CCCCcc-cccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH
Q 016660 165 AHVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (385)
Q Consensus 165 ~~~~~iP-~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~ 241 (385)
+.++++| +++++. +++++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++
T Consensus 113 ~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~ 191 (338)
T cd08295 113 QDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDL 191 (338)
T ss_pred hceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Confidence 7999995 678887 789999999999998878889999999999997 9999999999999999 79998889999999
Q ss_pred HHH-cCCCeEEeCCCC-CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCc----ccccHHH
Q 016660 242 GKR-FGVTEFVNSKNC-GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ----LSLSSFE 315 (385)
Q Consensus 242 ~~~-lg~~~vv~~~~~-~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~~ 315 (385)
+++ +|+++++++.+. +....+.+.+++++|++||++|+.. +..++++++++ |+++.+|....... ...+...
T Consensus 192 ~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~ 269 (338)
T cd08295 192 LKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLN 269 (338)
T ss_pred HHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHH
Confidence 998 999999997653 4444466665558999999999854 89999999997 99999986432111 1123455
Q ss_pred HhhcCcEEEEeeecCCCC--CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 316 VLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 316 ~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
++.+++++.++....+.. .+.+.++++++++|.+++. +...|+++++++|++.+++++. +|+|+++
T Consensus 270 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 270 IIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 667788888865443221 2346778899999977765 4456999999999999988775 5999864
No 80
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=5.6e-39 Score=302.97 Aligned_cols=323 Identities=25% Similarity=0.354 Sum_probs=269.0
Q ss_pred eeEEEeccCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCC
Q 016660 17 CRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (385)
Q Consensus 17 ~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (385)
|||+++.+++. ++++.+.+.|.+.++||+||+.++++|++|++...|.++...+|.++|||++|+|+++|+++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999998883 58888888888999999999999999999999988876555668899999999999999999999
Q ss_pred CCCCEEEecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECC
Q 016660 93 VEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (385)
Q Consensus 93 ~~GdrV~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP 171 (385)
++||+|++.+ ..+|+.|.+|..+.+++|....+ .|...+| +|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECC
Confidence 9999997654 46899999999999999986654 3433334 89999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 172 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
+++++.+++.+++.+.|||+++ ..++++++++|||+|+|++|++++++|+..|+ +|+++.+++++.+.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88899999999999999999999999999999 899998899999999999998888
Q ss_pred eCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 252 NSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
+.++. ...++|+++++.+....++.++++++++ |+++.+|... .....++... +.++..+.+....
T Consensus 217 ~~~~~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~-~~~~~~i~~~~~~-- 282 (329)
T cd08298 217 DSDDL---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYEL-LWGEKTIRSVANL-- 282 (329)
T ss_pred ccCcc---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhh-hhCceEEEEecCC--
Confidence 77652 1237999999987777799999999997 9999988532 2222233332 3456677666422
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 381 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi 381 (385)
..+.+.+++++++++.+.+ . .+.|+++++++|++.+++++.. |+++
T Consensus 283 -~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 283 -TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred -CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 2356888899999997654 2 5889999999999999887654 7663
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=6.2e-39 Score=302.79 Aligned_cols=328 Identities=27% Similarity=0.426 Sum_probs=272.6
Q ss_pred eEEEeccCCCCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCCE
Q 016660 18 RAAIATAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDV 97 (385)
Q Consensus 18 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gdr 97 (385)
||+++.+++..+++.+.|.|.+.+++|+||+.++++|+.|+..+.+.+....+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899998666999999999999999999999999999999988887654456889999999999999999999999999
Q ss_pred EEecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCc
Q 016660 98 VIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPP 176 (385)
Q Consensus 98 V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~ 176 (385)
|++.+. .+|+.|.+|.+++.++|.+..+ .+....| +|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCH
Confidence 988664 6799999999999999987554 2322233 8999999999999999999999
Q ss_pred ccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC
Q 016660 177 NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC 256 (385)
Q Consensus 177 ~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~ 256 (385)
.+++.+++.+.|||.++.. ..+.++++|||+|+|.+|++++++|+..|+ +|+++++++++.+.++++|++.+++..+.
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 216 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE 216 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCc
Confidence 9999999999999998744 789999999999988899999999999999 79999899999999999999888876552
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCc
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSD 336 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 336 (385)
.... . ..+++|++||+++.......++++++.+ |+++.++.... .........++.++.++.++.... .+.
T Consensus 217 ~~~~---~-~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 287 (330)
T cd08245 217 LDEQ---A-AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES-PPFSPDIFPLIMKRQSIAGSTHGG---RAD 287 (330)
T ss_pred chHH---h-ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC-CccccchHHHHhCCCEEEEeccCC---HHH
Confidence 2221 2 2247999999998877789999999997 99999986432 222333455667788888876432 357
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016660 337 IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 381 (385)
Q Consensus 337 ~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi 381 (385)
+..+++++.++.+.+ ..+.|++++++++|+.+.+++.. |+|+
T Consensus 288 ~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 288 LQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 888899999997764 34789999999999999877654 7664
No 82
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.9e-38 Score=300.03 Aligned_cols=300 Identities=19% Similarity=0.183 Sum_probs=230.9
Q ss_pred cEEEEeecCCCC-CCeEEEEEeeeecccccccccc---cCCCCCCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCC
Q 016660 29 LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWK---MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA 104 (385)
Q Consensus 29 l~~~~~~~p~~~-~~eVlVkv~a~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~ 104 (385)
+++.+.|.|+|. ++||||||.|+|||+.|..... +......+|.++|||++|+|+++|+++++|++||||+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 888999999874 9999999999999998864332 1111234678999999999999999999999999996310
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCccc----cc
Q 016660 105 DCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----AC 180 (385)
Q Consensus 105 ~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~----aa 180 (385)
|+|+||++++++.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 1799999999999999999865443 45
Q ss_pred ccccchhhhhhhhhhhccCCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCeEEeCCCC
Q 016660 181 LLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNC 256 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~~~~~~--~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vv~~~~~ 256 (385)
+++.++.|||+++.+.++++++ ++|||+|+ |++|++++|+|+++|+++|+++++++++.+++++ +|+++++++++.
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~ 211 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD 211 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC
Confidence 6777899999988777788876 99999997 9999999999999998679999889999998876 999999998876
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCC---Ccc--ccc--HHHH-hhcCcEEEEeee
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---SQL--SLS--SFEV-LHSGKILMGSLF 328 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~--~~~--~~~~-~~~~~~i~g~~~ 328 (385)
++...+++++++++|++||++|+.. +..++++++++ |+++.+|..... ... .+. ...+ ..+++++.+...
T Consensus 212 ~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (345)
T cd08293 212 NVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLV 289 (345)
T ss_pred CHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEe
Confidence 6666677776568999999999876 79999999997 999999853211 111 111 1111 223444433322
Q ss_pred cCCC--CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 329 GGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 329 ~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.... ..+.+++++++++++.+.+. ....++++++.+|++.+.+++. +|+|+++
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 290 LNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred eccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 1211 11336677889999987765 3455799999999999988775 5999864
No 83
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=4e-38 Score=294.03 Aligned_cols=301 Identities=27% Similarity=0.431 Sum_probs=253.0
Q ss_pred eeEEEeccCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||+++.+++ ..+++++++.|++.+++|+|||.++++|++|++...+.+.....|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788888755 349999999999999999999999999999999888765433457889999999999999999999999
Q ss_pred CEEEecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 96 DVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 96 drV~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
|+|+..+. .+|+.|++|..+..+.|..... +|.... |+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQAD-------------------GGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCC-------------------CceEEEEEcchHHeEECcCCC
Confidence 99998774 6799999999999999975432 232223 399999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEE--cCCchHHHHHHHcCCCeEEe
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGV--DVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~--~~~~~~~~~~~~lg~~~vv~ 252 (385)
++++++ +...+.+||+++....+++++++|||.|+|.+|++++++|+.+|+ +|+++ .+++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999998888889999999998889999999999999999 67766 334557888899999888 8
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
++..++...+..++++ ++|++||++|+...+...+++++++ |+++.+|... .....++...++.+++++.|++++.
T Consensus 216 ~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~- 292 (306)
T cd08258 216 GGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSST- 292 (306)
T ss_pred CCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecCc-
Confidence 7765565557777766 8999999998877789999999997 9999999864 3346667777888999999998654
Q ss_pred CCCCcHHHHHHHHHcC
Q 016660 332 KAKSDIPILLKRYMDK 347 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g 347 (385)
+++++++++++++|
T Consensus 293 --~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 --PASWETALRLLASG 306 (306)
T ss_pred --hHhHHHHHHHHhcC
Confidence 36799999998765
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=3.7e-38 Score=297.25 Aligned_cols=305 Identities=19% Similarity=0.204 Sum_probs=243.5
Q ss_pred eeeEEEeccC--CCC----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCC
Q 016660 16 QCRAAIATAP--GEP----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENV 89 (385)
Q Consensus 16 ~~~a~~~~~~--~~~----l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v 89 (385)
.||||++..+ +.+ +++.+.|.|+|++|||+|||.+++||+.|.+.... ...+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 4889998883 332 88899999999999999999999999987653221 124588999999999995 44
Q ss_pred CCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC---c
Q 016660 90 DGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA---H 166 (385)
Q Consensus 90 ~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~---~ 166 (385)
++|++||||+.. ++|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999621 178999999999 9
Q ss_pred eEECCCCCCc-----ccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 016660 167 VVKVDPTVPP-----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (385)
Q Consensus 167 ~~~iP~~l~~-----~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~ 240 (385)
++++|+++++ ..++++++++.|||+++.+..+++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 9999999982 2234678899999999888889999999999986 9999999999999999 7999989999999
Q ss_pred HHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCC---c--ccccHHH
Q 016660 241 IGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS---Q--LSLSSFE 315 (385)
Q Consensus 241 ~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~--~~~~~~~ 315 (385)
+++++|+++++++++.++...+++.+++++|++||++|+.. +..++++++++ |+++.+|...... . .......
T Consensus 183 ~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~ 260 (329)
T cd08294 183 WLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQET 260 (329)
T ss_pred HHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHH
Confidence 99999999999998766666677766568999999999855 89999999997 9999998532111 1 1223345
Q ss_pred HhhcCcEEEEeeecCCC--CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 316 VLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 316 ~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
++.+++++.++....+. ..+.++++++++++|.+.+. ....++++++++|++.+.+++. +|+++++
T Consensus 261 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 261 IIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 66678888887543321 12346678899999987765 3356899999999999988775 5999864
No 85
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.8e-38 Score=297.77 Aligned_cols=291 Identities=19% Similarity=0.214 Sum_probs=234.5
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCC
Q 016660 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTE 108 (385)
Q Consensus 29 l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~ 108 (385)
+++.+.|.|.|++|||||||.|+++|+.|.. |.+.....|.++|.|++|+|+++|+ +|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8889999999999999999999999997554 3333233478999999999999874 59999999631
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEEC----CCCCCcccc-cccc
Q 016660 109 CVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLS 183 (385)
Q Consensus 109 ~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i----P~~l~~~~a-a~l~ 183 (385)
++|++|+.++.+.+.++ |+++++++| ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 16899999999988887 899999987 6789
Q ss_pred cchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCC-CchhH
Q 016660 184 CGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC-GDKSI 261 (385)
Q Consensus 184 ~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~-~~~~~ 261 (385)
+++.|||+++.+.++++++++|||+|+ |++|++++|+||..|+ +|+++++++++.++++++|+++++++++. .....
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~ 199 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEET 199 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHH
Confidence 999999998888889999999999996 9999999999999999 79999889999999999999999998874 33333
Q ss_pred HHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCC---Cccc--ccHHHHhhcCcEEEEeeecCCC---C
Q 016660 262 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG---SQLS--LSSFEVLHSGKILMGSLFGGLK---A 333 (385)
Q Consensus 262 i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~--~~~~~~~~~~~~i~g~~~~~~~---~ 333 (385)
+...+++++|++||++|+.. +..++++++++ |+++.+|..... ...+ .....+..+++++.++....+. .
T Consensus 200 ~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (325)
T TIGR02825 200 LKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVR 277 (325)
T ss_pred HHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhh
Confidence 44444448999999999876 79999999997 999999864311 1111 1233456678888887543321 1
Q ss_pred CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 334 KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 334 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
.+.+.++++++++|++.+. +...|+|+++.+|++.+++++. +|+|+.
T Consensus 278 ~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 278 QKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 2357789999999988765 4467899999999999988775 488863
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=6.3e-38 Score=297.24 Aligned_cols=313 Identities=22% Similarity=0.282 Sum_probs=256.0
Q ss_pred eeEEEeccCCCC---cEEEEeecCCCCC-CeEEEEEeeeecccccccccccCCCCC-C----CCccccCceeEEEEEeCC
Q 016660 17 CRAAIATAPGEP---LVIDEVIVDPPNS-HEVRVRIICTSLCHSDVTFWKMKDFPA-V----FPRILGHEAIGVVESVGE 87 (385)
Q Consensus 17 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~eVlVkv~a~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~vG~ 87 (385)
|||+++.+++.+ +.+.+.|.|.|.+ ++|+||+.++++|+.|+..+.|..+.. . +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999999875 7999999998887 999999999999999999888865431 2 577899999999999999
Q ss_pred CCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCce
Q 016660 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHV 167 (385)
Q Consensus 88 ~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~ 167 (385)
+++.|++||+|+.... +.|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999974311 0138999999999999
Q ss_pred EECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc----hHHHHH
Q 016660 168 VKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS----EKFEIG 242 (385)
Q Consensus 168 ~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~----~~~~~~ 242 (385)
+++|+++++++++++++.+.|||+++.....++++++|||+|+ |++|++++|+|++.|+ +++++..++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999998877778999999999987 9999999999999999 677776555 678888
Q ss_pred HHcCCCeEEeCCCC---CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhc
Q 016660 243 KRFGVTEFVNSKNC---GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 319 (385)
Q Consensus 243 ~~lg~~~vv~~~~~---~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 319 (385)
+++|+++++++++. .....+..+.++++|++|||+|+.. +..++++++++ |+++.+|.... ....++...++.+
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~ 268 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLLIFK 268 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHHhhC
Confidence 89999999988764 3444466665558999999999876 77899999997 99999986432 2345555566778
Q ss_pred CcEEEEeeecCCCC-------CCcHHHHHHHHHcCCCCCCCceeeee---ecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 320 GKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 320 ~~~i~g~~~~~~~~-------~~~~~~~~~~~~~g~~~~~~~i~~~~---~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
+.++.+........ .+.+..+++++.++.+.+. ....+ +++++.++++.+.+++. +|+|++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 99999886543210 1247778888989977654 33556 99999999999987765 4999875
No 87
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=2.3e-37 Score=292.73 Aligned_cols=309 Identities=18% Similarity=0.166 Sum_probs=245.9
Q ss_pred eEEEeccC---CCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCC
Q 016660 18 RAAIATAP---GEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGV 92 (385)
Q Consensus 18 ~a~~~~~~---~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (385)
||+++..+ +.+ +++.++|.|+|+++||+|||.++++|+.|+....+..+...+|.++|+|++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57777776 433 8888999999999999999999999999998887765544568899999999999999999999
Q ss_pred CCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 93 ~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
++||+|+... +.... |+|++|++++.+.++++|+
T Consensus 81 ~~Gd~V~~~~---------------------------~~~~~-------------------g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAG---------------------------DIDRP-------------------GSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcC---------------------------CCCCC-------------------CcccceEEEcHHHcccCCC
Confidence 9999997421 00111 3899999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCC-----CCEEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHHc
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRF 245 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~~VlI~G~-g~vG~~ai~la~~~-G~~~vi~~~~~~~~~~~~~~l 245 (385)
++++++++.+++.+.|||+++....++++ +++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999998877788877 999999986 99999999999998 99 899998889999999999
Q ss_pred CCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEE
Q 016660 246 GVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 325 (385)
Q Consensus 246 g~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 325 (385)
|+++++++.. .....+.+...+++|+++|++++...+..++++++++ |+++.++.. ..++...+..+++++.+
T Consensus 194 g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~~~~ 266 (336)
T TIGR02817 194 GAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSISLHW 266 (336)
T ss_pred CCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceEEEE
Confidence 9999998655 4444466643338999999987767689999999997 999988532 23344444555677665
Q ss_pred eeec--CCCC-------CCcHHHHHHHHHcCCCCCCCceeeee---ecchHHHHHHHHhcCCe-eEEEEE
Q 016660 326 SLFG--GLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 326 ~~~~--~~~~-------~~~~~~~~~~~~~g~~~~~~~i~~~~---~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
..+. .... .+.+.++++++.++.+.+. +++.+ +++++++|++.+.+++. +|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 267 EFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 4332 1111 1346778899999976543 33444 47899999999988775 488764
No 88
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.1e-37 Score=293.97 Aligned_cols=315 Identities=17% Similarity=0.210 Sum_probs=253.9
Q ss_pred eeeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 16 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
+||++++.+++.+ +++.++|.|+|.++||+|||.++++|++|+....+.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 4899999988764 88899999999999999999999999999998888765555688999999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+... . +.|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~-----------------------------~-------------------~~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQ-----------------------------S-------------------ALGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECC-----------------------------C-------------------CCcceeeEEEcCHHHceeCCCC
Confidence 999996310 0 1138999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++++++.+++.+.|||.++.....+.++++|+|+|+ |.+|++++++|+.+|+ +|++++.++++.+.++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999988899999998877788999999999975 9999999999999999 7888888999999999999999998
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEE-Eeee-c
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM-GSLF-G 329 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~-g~~~-~ 329 (385)
.++......++.++++ ++|++||++|+.. +..++++++++ |+++.+|.... ....++...+..++..+. .... .
T Consensus 192 ~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (327)
T PRK10754 192 YREENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTRPSLQG 268 (327)
T ss_pred CCCCcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEecceeec
Confidence 8775555557788877 8999999999855 88899999997 99999987532 112233333332222211 1111 1
Q ss_pred CCCCC----CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 330 GLKAK----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 330 ~~~~~----~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
..... +.+.++++++++|.+.+..+..+.|+++++.++++.+.++.. +|+||+
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 269 YITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 11111 124567889999988765555689999999999999987765 599986
No 89
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-36 Score=287.58 Aligned_cols=329 Identities=24% Similarity=0.306 Sum_probs=268.9
Q ss_pred eeEEEeccCC--CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++...+ +.+++.+.+.|.+.++||+||+.++++|++|+....+.+.. ...|.++|||++|+|+++|+++++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 6899998664 33888888888889999999999999999999988776543 34678899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+......|+.+.+| +|..... .|...+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPT------AEDEASA---LGGPID-------------------GVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEeccccccccccc------ccccccc---cccccC-------------------ceeeeEEEecHHHeEECCCC
Confidence 9999998776666554443 3322111 222223 38999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
+++.+++.+++.+.+||+++.....++++++|+|+|+|++|++++++|+..|+ +|++++.++++.+.++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999988777889999999999889999999999999999 78999889999999999999999987
Q ss_pred CC-CCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 254 KN-CGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 254 ~~-~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
+. ......+..++++ ++|++||+++... +..++++++++ |+++.+|..... ........++.+++++.+.....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 287 (336)
T cd08276 212 RTTPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVGS- 287 (336)
T ss_pred CcccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecCc-
Confidence 76 4455557777776 8999999998655 88999999997 999999875422 22445566678899999886543
Q ss_pred CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 332 KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 332 ~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
.+.+.+++++++++.+.+ +.++.+++++++++++.+.+++. +|++++
T Consensus 288 --~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 288 --RAQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred --HHHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 357888899998886544 35688999999999999987765 488875
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=7.9e-37 Score=287.45 Aligned_cols=313 Identities=20% Similarity=0.221 Sum_probs=257.0
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---CCCCCccccCceeEEEEEeCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG 91 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (385)
|||+++++++.+ +.+.+.+.|.+.+++|+|||.++++|+.|+....|..+ ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876643 66777777778999999999999999999988877543 2345788999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECC
Q 016660 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (385)
Q Consensus 92 ~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP 171 (385)
+++||+|+.... .. .|+|++|+.++.++++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~~-------------------~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------RA-------------------GGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------CC-------------------CceeeEEEEEchHHeEeCC
Confidence 999999975310 01 2389999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE
Q 016660 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (385)
Q Consensus 172 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 250 (385)
+++++++++.+++.+.||| ++....+++++++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 4667788999999999996 9999999999999999 79999889999999999999989
Q ss_pred EeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeec
Q 016660 251 VNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 329 (385)
Q Consensus 251 v~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 329 (385)
+++.+......+.+++++ ++|+++|++|+.. ...++++++.+ |+++.+|..... ...++...++.+++++.+....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08244 192 VDYTRPDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGE-WTALDEDDARRRGVTVVGLLGV 268 (324)
T ss_pred EecCCccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCC-CCccCHHHHhhCCcEEEEeecc
Confidence 988775555557777776 8999999999886 68999999997 999999875322 2355555667789998887644
Q ss_pred CCCC---CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 330 GLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 330 ~~~~---~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.... .+.+.++++++.++.+. +++++.|+++++.+|++.+.+++. +|+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 269 QAERGGLRALEARALAEAAAGRLV--PVVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCcc--CccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 3211 23566788889888664 346789999999999999987765 4988763
No 91
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.4e-36 Score=286.94 Aligned_cols=314 Identities=22% Similarity=0.266 Sum_probs=256.1
Q ss_pred eeeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCC
Q 016660 16 QCRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (385)
Q Consensus 16 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (385)
||||+++.+++.+ +++.+.+.|++.+++|+|||.++++|+.|+....+..+. ...|.++|||++|+|+++|++++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 5999999988753 667788888889999999999999999999888776532 3446789999999999999999999
Q ss_pred CCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 93 ~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
++||+|+... .+ |+|++|++++.++++++|+
T Consensus 81 ~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL------------------------------PG-------------------GGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec------------------------------CC-------------------CceeeEEEecHHHcEeCCC
Confidence 9999996321 11 3899999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
++++.+++.+++++.|||+++.+...+.++++|||+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|+++++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998877788999999999996 9999999999999999 666677889999999999999899
Q ss_pred eCCCCC-chhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCccc-ccHHHHhhcCcEEEEeee
Q 016660 252 NSKNCG-DKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLS-LSSFEVLHSGKILMGSLF 328 (385)
Q Consensus 252 ~~~~~~-~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~i~g~~~ 328 (385)
++...+ ....+.+.+++ ++|++||++++.. +..++++++++ |+++.+|...+ ..+. ++...++.++.++.++..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 267 (334)
T PTZ00354 191 RYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFSTL 267 (334)
T ss_pred ecCChhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeeec
Confidence 887643 44456777766 8999999998754 88999999997 99999986432 2223 666666777778888764
Q ss_pred cCCCCC-------CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 329 GGLKAK-------SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 329 ~~~~~~-------~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
...... +.+.+++++++++.+.+ ++.+.+++++++++++.+.+++. +|+++...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 268 RSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 432110 22466778888886654 46688999999999999887764 59998764
No 92
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=2.7e-36 Score=283.97 Aligned_cols=313 Identities=19% Similarity=0.191 Sum_probs=245.6
Q ss_pred eeEEEeccCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++.++++ ++++++.|.|.+.+++|+|||.++++|++|+..+.|.++. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 68999999886 6999999999999999999999999999999988887542 335778999999999999 456899
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+.... ..|+..+| +|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~~~~g-------------------~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGMNTDG-------------------GFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCCCCCc-------------------eeEEEEEEchhhEEECCCC
Confidence 9999985421 02222233 9999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhc--cCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTA--NVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~--~~~-~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 249 (385)
+++++++.+++.+.|||.++.... ++. .+++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999999875543 335 3579999997 9999999999999999 7999999999999999999999
Q ss_pred EEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeee
Q 016660 250 FVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLF 328 (385)
Q Consensus 250 vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~ 328 (385)
++++++. .....+...+ ++|++||++|+.. +..++++++++ |+++.+|..... ...++...++.+++++.+...
T Consensus 195 ~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 195 VLDREDL--LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred EEcchhH--HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEEe
Confidence 9887652 2223343444 8999999999864 99999999997 999999975422 224455555578999988765
Q ss_pred cCCCC---CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 329 GGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 329 ~~~~~---~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
..... .+.++.+.+++..+.. +.+...|++++++++++.+.+++. +|+|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 270 VNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred ecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 43211 0123334444445522 236789999999999999988775 4988864
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.3e-36 Score=282.08 Aligned_cols=311 Identities=24% Similarity=0.257 Sum_probs=251.7
Q ss_pred eeeEEEeccCCC----CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCC
Q 016660 16 QCRAAIATAPGE----PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVD 90 (385)
Q Consensus 16 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~ 90 (385)
.||||++..++. ++++.+.+.|.+.+++|+|||.++++|+.|+....|.+.. ..+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 389999998775 4889999999999999999999999999999988776543 45788999999999999999999
Q ss_pred CCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEEC
Q 016660 91 GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (385)
Q Consensus 91 ~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i 170 (385)
+|++||+|+... .|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999997421 238999999999999999
Q ss_pred CCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe
Q 016660 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (385)
Q Consensus 171 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 249 (385)
|++ +.+++.+++++.|||+++.+..+++++++|+|+|+ |.+|++++++|+..|+ .|+++.+++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677888899999998877788999999999996 9999999999999999 7888888889999999999988
Q ss_pred EEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCC---------cccccHHHHhhcC
Q 016660 250 FVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS---------QLSLSSFEVLHSG 320 (385)
Q Consensus 250 vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~~~ 320 (385)
+++.++......+....++++|++||++|+. .+..++++++++ |+++.+|...... ...++ ...+.++
T Consensus 188 v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 264 (329)
T cd08250 188 PINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKS 264 (329)
T ss_pred EEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhccC-CeEEEEecccCCcccCccccccccccc-HHHhhcC
Confidence 8887764444445554444899999999975 489999999997 9999998653211 11222 2345678
Q ss_pred cEEEEeeecCCC--CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEE
Q 016660 321 KILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 382 (385)
Q Consensus 321 ~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi~ 382 (385)
+++.+.....+. ..+.+.+++++++++.+.+.....+.++++++++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 888887643221 124567788999999776643344668999999999999877654 88764
No 94
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=7.7e-36 Score=282.72 Aligned_cols=312 Identities=24% Similarity=0.300 Sum_probs=246.3
Q ss_pred eeEEEeccCC-CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 17 CRAAIATAPG-EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 17 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
|||++++.++ ..+++.+.|.|+|+++||+|||.++++|++|+....+.+ ...+|.++|||++|+|+.+|+++++|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899999995 238899999999999999999999999999998876654 12357789999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
|+|+..+...|+ +.. ..|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------NDP-------------------RNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------CCC-------------------CCCcccceEEechhheEECCCCCC
Confidence 999865432221 001 124899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccC----------CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 244 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~----------~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 244 (385)
+.+++++++.+.|||+++.+..++ .++++|||+|+ |.+|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987666544 78999999997 9999999999999999 777776 5688899999
Q ss_pred cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhcc--CCceEEEeccCCCCCcccccHHHHhhcCcE
Q 016660 245 FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRK--GWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 322 (385)
Q Consensus 245 lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 322 (385)
+|+++++++++......++.++++++|++||++|++..+..+++++++ + |+++.+|...... . +..+..
T Consensus 197 ~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~------~~~~~~ 267 (339)
T cd08249 197 LGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--E------PRKGVK 267 (339)
T ss_pred cCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--c------CCCCce
Confidence 999999998875555557666666899999999986669999999999 8 9999998653221 0 112233
Q ss_pred EEEeeecCC---------CCCCcHHHHHHHHHcCCCCCCCceeeeee--cchHHHHHHHHhcCC-e-eEEEEEe
Q 016660 323 LMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMK--FEEINSAFDLLIKGK-C-LRCVIWM 383 (385)
Q Consensus 323 i~g~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~i~~~~~--l~~~~~a~~~l~~~~-~-~k~vi~~ 383 (385)
+........ .....+..++++++++.+.+.+. ..++ ++++++|++.+..++ . +|+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 268 VKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPV--RVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCc--eecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 222221111 11234667888999998776533 4566 999999999998877 5 4999874
No 95
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1.3e-35 Score=279.14 Aligned_cols=299 Identities=20% Similarity=0.241 Sum_probs=249.9
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCC
Q 016660 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCT 107 (385)
Q Consensus 29 l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~ 107 (385)
+++.+.|.|.+.+++|+|||.++++|+.|...+.+.+.. ..+|.++|||++|+|+++|++++++++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999988776542 346789999999999999999999999999974320
Q ss_pred CCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccccccccchh
Q 016660 108 ECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVS 187 (385)
Q Consensus 108 ~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ 187 (385)
. |+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 90 --------------------------~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 --------------------------E-------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred --------------------------C-------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 1 3899999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhh
Q 016660 188 TGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMT 266 (385)
Q Consensus 188 ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~ 266 (385)
|||+++.....+.++++|||+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|+++++++++......+.+++
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 203 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEAT 203 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHh
Confidence 99998877778899999999987 9999999999999999 788888888999999999999999987755555577777
Q ss_pred CC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC-------CCcHH
Q 016660 267 DG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIP 338 (385)
Q Consensus 267 ~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~-------~~~~~ 338 (385)
++ ++|++||++|+.. ....+++++++ |+++.+|..... ...++...+..++.++.+..+..+.. .+.+.
T Consensus 204 ~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (323)
T cd05282 204 GGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFA 280 (323)
T ss_pred cCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHH
Confidence 77 8999999999877 67889999997 999999875433 34556655555799999887654321 13477
Q ss_pred HHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 339 ILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 339 ~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
++++++.++.+.+ .+++.|+++++.++++.+.+++. +|++++
T Consensus 281 ~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 281 EVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 7888888997654 35788999999999999987765 488763
No 96
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.6e-36 Score=281.84 Aligned_cols=302 Identities=25% Similarity=0.376 Sum_probs=228.1
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-C---CCCccccCceeEEE---EEeC-CCCCCCCCCCEEEe
Q 016660 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-A---VFPRILGHEAIGVV---ESVG-ENVDGVVEGDVVIP 100 (385)
Q Consensus 29 l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~---~~p~~~G~e~~G~V---~~vG-~~v~~~~~GdrV~~ 100 (385)
....+.|+|.|.+++++|++.++++|+.|+.+.+|.+.. . .+|.+++.++.|.+ ...| ..+..+..||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 556788999999999999999999999999999998865 3 46755655555553 3344 22334555555532
Q ss_pred cCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCccccc
Q 016660 101 HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRAC 180 (385)
Q Consensus 101 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa 180 (385)
+...|+|+||++++...++++|+++++.+||
T Consensus 100 -------------------------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 -------------------------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred -------------------------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2223499999999999999999999999999
Q ss_pred ccccchhhhhhhhhhhc------cCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 181 LLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~------~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
++++++.|||.++.... +.+++++|||+|+ |++|++++|+|++.|+ ..+++.++++++++++++|+++++||
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999998 8999999999976 9999999999999996 45555589999999999999999999
Q ss_pred CCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCC---CCcccccHH-HHhhcCcEEEEeee-
Q 016660 254 KNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP---GSQLSLSSF-EVLHSGKILMGSLF- 328 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~---~~~~~~~~~-~~~~~~~~i~g~~~- 328 (385)
++.+..+.+.+.+.++||+||||+|+.. ......++..+ |+...++...+ ..... ... .+........+...
T Consensus 210 ~~~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 286 (347)
T KOG1198|consen 210 KDENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVGDELANYKLD-DLWQSANGIKLYSLGLKGV 286 (347)
T ss_pred CCHHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEeccccccccccc-cchhhhhhhhheeeeeecc
Confidence 9977777788888449999999999985 77778888886 76544443221 11111 000 01111111111110
Q ss_pred -----cCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeCC
Q 016660 329 -----GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMGE 385 (385)
Q Consensus 329 -----~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~~ 385 (385)
......+.+..+.++++++ .+++.+.+.||++++.+|++.+.+++. +|+++.+.+
T Consensus 287 ~~~~~~~~~~~~~l~~l~~~ie~g--kikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 287 NYRWLYFVPSAEYLKALVELIEKG--KIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred ceeeeeecCCHHHHHHHHHHHHcC--cccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 1112245688899999999 555558999999999999999988664 699998763
No 97
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=3.3e-35 Score=274.95 Aligned_cols=303 Identities=24% Similarity=0.353 Sum_probs=246.2
Q ss_pred ccCCCCcEEEEeecCCCCCCeEEEEEeeeeccccccccc-ccCCCC--CCCCccccCceeEEEEEeCCCCCCCCCCCEEE
Q 016660 23 TAPGEPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFW-KMKDFP--AVFPRILGHEAIGVVESVGENVDGVVEGDVVI 99 (385)
Q Consensus 23 ~~~~~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~ 99 (385)
++++. +++.+++.|++.++||+|||.++++|+.|+..+ .+.... +.+|.++|+|++|+|+++|++++++++||+|+
T Consensus 2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 34554 899999999999999999999999999999887 665421 23478899999999999999999999999997
Q ss_pred ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccc
Q 016660 100 PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA 179 (385)
Q Consensus 100 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~a 179 (385)
... .|+|++|+.++.+.++++|+++ ..+
T Consensus 81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~ 108 (312)
T cd08269 81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ 108 (312)
T ss_pred Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence 431 1389999999999999999998 233
Q ss_pred cccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCch
Q 016660 180 CLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK 259 (385)
Q Consensus 180 a~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~ 259 (385)
+.+..++.++|+++. ..+++++++|||+|+|.+|++++++|+..|++.|+++.+++++.++++++|++++++.++....
T Consensus 109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 187 (312)
T cd08269 109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEAIV 187 (312)
T ss_pred HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHH
Confidence 322367888988764 7889999999999889999999999999999448989888999999999999999887665566
Q ss_pred hHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC-CCCCcH
Q 016660 260 SIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL-KAKSDI 337 (385)
Q Consensus 260 ~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~-~~~~~~ 337 (385)
..+.+++++ ++|++||++|+...+..++++++++ |+++.+|... .....+++..+..+++.+.+...... ...+.+
T Consensus 188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (312)
T cd08269 188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGM 265 (312)
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence 667777777 8999999999887789999999997 9999998653 33345555566667888877643222 123578
Q ss_pred HHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe--eEEEE
Q 016660 338 PILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVI 381 (385)
Q Consensus 338 ~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~--~k~vi 381 (385)
++++++++++.+.+..++.+.|+++++.++++.+.++.. +|+++
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 266 REAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 889999999987765456688999999999999988754 58876
No 98
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-35 Score=276.34 Aligned_cols=298 Identities=21% Similarity=0.285 Sum_probs=242.5
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
||++++.+++ | +++.+.|.|.+.++||+|||.++++|+.|++..... ..|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCC
Confidence 5888888754 3 677788999999999999999999999999876522 23668999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|+... . .|+|++|+.++.+.++++|+++
T Consensus 76 Gd~V~~~~------------------------------~-------------------~g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG------------------------------A-------------------MGAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec------------------------------C-------------------CcceeeEEEEchHHeEECCCCC
Confidence 99996321 1 1389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
++++++++++.+.|||+++...... ++++|+|+|+ |++|++++++|+..|+ +|+++.+++++.+.++++|++.+++.
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999987555544 5999999998 9999999999999999 79999889999999999998766543
Q ss_pred CCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhh--cCcEEEEeeecC-
Q 016660 254 KNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH--SGKILMGSLFGG- 330 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~i~g~~~~~- 330 (385)
.+ ++.++++|+++|++|+.. +..++++++.+ |+++.+|... .....++...+.. ++.++.+.....
T Consensus 185 ~~--------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (305)
T cd08270 185 GS--------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYDG 253 (305)
T ss_pred cc--------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccCH
Confidence 32 122347999999999875 89999999997 9999998753 3334455555544 588888876543
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 331 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
....+.+..++++++++++.+. +.+.+++++++++++.+.+++. +|+++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 254 EPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1112457788899999977654 6689999999999999987765 4998864
No 99
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=4e-35 Score=276.22 Aligned_cols=315 Identities=17% Similarity=0.205 Sum_probs=240.9
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCC-CCCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKD-FPAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++.+++++ +.+.+.|.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|+++| +++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 689999988764 7788999999999999999999999999987654322 123458899999999999964 57799
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+..+.. .|.... |+|++|+.++++.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVSHH-------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCCCC-------------------CcceeEEEEcHHHeEECCCC
Confidence 99999854310 122222 39999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhh--cc-CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRT--AN-VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~--~~-~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 249 (385)
+++++++.+++.+.|||.++... .. ...+++|||+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|+++
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999999876432 23 334789999998 9999999999999999 7999989999999999999999
Q ss_pred EEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeec
Q 016660 250 FVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 329 (385)
Q Consensus 250 vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 329 (385)
+++.++. ....+..+.++++|++||++|+. .+..++++++++ |+++.+|... ....+++...++.+++++.+....
T Consensus 195 v~~~~~~-~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T cd08289 195 VIPREEL-QEESIKPLEKQRWAGAVDPVGGK-TLAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGIDSV 270 (326)
T ss_pred EEcchhH-HHHHHHhhccCCcCEEEECCcHH-HHHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEEEeE
Confidence 9887763 22335555434899999999985 489999999997 9999999753 223444456666789999997532
Q ss_pred CCCCCCcHHHHHHHHHcCCCC---CCCceeeeeecchHHHHHHHHhcCCee-EEEEEe
Q 016660 330 GLKAKSDIPILLKRYMDKELE---LDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 383 (385)
Q Consensus 330 ~~~~~~~~~~~~~~~~~g~~~---~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi~~ 383 (385)
... ......+++.+.. .+. ....+++.|+++++.+||+.+.+++.. |+++++
T Consensus 271 ~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 271 ECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred ecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 210 1122333333322 222 122357899999999999999887764 888763
No 100
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.1e-34 Score=272.88 Aligned_cols=310 Identities=18% Similarity=0.198 Sum_probs=243.0
Q ss_pred eEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 18 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
||+++...+.| +++++.|.|.+.+++|+|||.++++|++|+..+.|.+.. ..+|.++|||++|+|+. +++.+|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 57788877764 689999999999999999999999999999988886532 34588899999999998 56678999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|+..... .|.... |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVSHD-------------------GGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCCCC-------------------ccceEEEEEchhheEECCCCC
Confidence 9999854210 122222 389999999999999999999
Q ss_pred Ccccccccccchhhhhhhhhhh--ccCCCCC-EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE
Q 016660 175 PPNRACLLSCGVSTGVGAAWRT--ANVEVGS-TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~--~~~~~~~-~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 250 (385)
++++++++++.+.|||.++... .++.+++ +|||+|+ |.+|++++++|+.+|+ +++++..++++.+.++++|++++
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999999999998876433 3478898 9999997 9999999999999999 67777778888899999999988
Q ss_pred EeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecC
Q 016660 251 VNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 330 (385)
Q Consensus 251 v~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 330 (385)
++.++.. ..++.+..+++|+++|++|+.. +..++++++++ |+++.+|... ....+++...++.+++++.+.....
T Consensus 195 ~~~~~~~--~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (323)
T TIGR02823 195 IDREDLS--PPGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGIDSVY 269 (323)
T ss_pred EccccHH--HHHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEeccc
Confidence 8876522 2344555557999999999875 88999999997 9999999753 2334444455667899998875432
Q ss_pred CCCCC----cHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEE
Q 016660 331 LKAKS----DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 382 (385)
Q Consensus 331 ~~~~~----~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi~ 382 (385)
.. .. .+..+.+++..+.+.. + .+.|+++++++||+.+.+++.. |++++
T Consensus 270 ~~-~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 270 CP-MALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred cC-chhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence 21 12 2445555666775543 3 4689999999999999887754 88876
No 101
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6e-35 Score=273.85 Aligned_cols=312 Identities=23% Similarity=0.309 Sum_probs=247.0
Q ss_pred eeEEEeccCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 17 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
||++++.+++. .+++.+.+.|.+.++||+|||.++++|+.|+....+.+.....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 57888887764 266778888888999999999999999999998888765455678999999999999995 57999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|+..... ++...+ |+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGRTFD-------------------GSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCCCCC-------------------cccceEEEcCHHHcEeCCCCC
Confidence 9999764210 111112 389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
++++++.+++++.|||+++.+...+.++++|||+|+ |++|++++|+|+.+|+ +|+++..++++.+.++++|++++++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999998877778999999999997 9999999999999999 79988889999999999999888754
Q ss_pred CCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcc-cccHHHHh--hcCcEEEEeeecC
Q 016660 254 KNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL-SLSSFEVL--HSGKILMGSLFGG 330 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~~--~~~~~i~g~~~~~ 330 (385)
.. .....+.++ +.++|+++|++|+.. +..++++++++ |+++.+|...+.... ........ .+++++.+.....
T Consensus 195 ~~-~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (320)
T cd08243 195 DG-AIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGD 270 (320)
T ss_pred Cc-cHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhh
Confidence 32 344446666 448999999999854 89999999997 999999874322211 11222222 4677777664322
Q ss_pred CCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 331 LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 331 ~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
.. .+.+.+++++++++.+.+ +.++.++++++++|++.+.++.. +|+++
T Consensus 271 ~~-~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 271 VP-QTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hh-HHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 21 235778889999997654 35688999999999999987765 47775
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.1e-34 Score=274.41 Aligned_cols=313 Identities=19% Similarity=0.146 Sum_probs=249.8
Q ss_pred eeEEEeccCCCC-----cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCC
Q 016660 17 CRAAIATAPGEP-----LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDG 91 (385)
Q Consensus 17 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (385)
|||+++.+++++ +++.++|.|.+.+++|+||+.++++|+.|+....+..+...+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 579999998874 556677888889999999999999999999987776543345778999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECC
Q 016660 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (385)
Q Consensus 92 ~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP 171 (385)
|++||+|..... ...+ |+|++|+.++.++++++|
T Consensus 81 ~~~Gd~V~~~~~---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGD---------------------------ITRP-------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCC---------------------------CCCC-------------------ccceEEEEEchHHeeeCC
Confidence 999999974210 0112 389999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhccCCC-----CCEEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHH
Q 016660 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR 244 (385)
Q Consensus 172 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~-----~~~VlI~G~-g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~ 244 (385)
+++++++++.+++.+.|||+++.+...+.+ +++|+|+|+ |++|++++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998877788877 999999986 999999999999999 7 89999888999999999
Q ss_pred cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEE
Q 016660 245 FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILM 324 (385)
Q Consensus 245 lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~ 324 (385)
+|+++++++++ .....+.....+++|++||++|+...+..++++++++ |+++.+|... ..++...+..++.++.
T Consensus 194 ~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~~~ 267 (336)
T cd08252 194 LGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSASFH 267 (336)
T ss_pred cCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----CcccchhhhcccceEE
Confidence 99999998775 3434454333238999999999876699999999997 9999998642 2344444556788888
Q ss_pred EeeecCCC--C-------CCcHHHHHHHHHcCCCCCCCc-eeeeeecchHHHHHHHHhcCCee-EEEEE
Q 016660 325 GSLFGGLK--A-------KSDIPILLKRYMDKELELDKF-VTHEMKFEEINSAFDLLIKGKCL-RCVIW 382 (385)
Q Consensus 325 g~~~~~~~--~-------~~~~~~~~~~~~~g~~~~~~~-i~~~~~l~~~~~a~~~l~~~~~~-k~vi~ 382 (385)
+..+.... . .+.+.++++++.++.+.+... ..+.+++++++++++.+.++... |++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 268 WEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 76543211 1 123677889999997765311 12457999999999999887754 87763
No 103
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=7.7e-34 Score=267.25 Aligned_cols=313 Identities=15% Similarity=0.151 Sum_probs=245.1
Q ss_pred eeEEEeccCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++.+++. .+++++.|.|+|++++|+|||.++++|+.|+..+.+.+.. ..+|.++|||++|+|++ +++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 68999998885 3889999999999999999999999999999988776532 34577899999999999 7778899
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+.... + .|.... |+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~--------------~----------~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGW--------------G----------VGERHW-------------------GGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCc--------------c----------CCCCCC-------------------CcceeEEEEchHHeeeCCCC
Confidence 9999975310 0 010112 38999999999999999999
Q ss_pred CCcccccccccchhhhhhhhh--hhccCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe
Q 016660 174 VPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE 249 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~--~~~~~~-~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 249 (385)
+++++++.+++.+.|++.++. ...+.. ++++|||+|+ |++|++++|+|+.+|+ +|++++.++++.++++++|+++
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999887643 123445 5789999997 9999999999999999 7888888999999999999999
Q ss_pred EEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeec
Q 016660 250 FVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 329 (385)
Q Consensus 250 vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 329 (385)
++++++ ....+..++.+++|.+||++++.. +..++..++.+ |+++.+|... .....+++..++.+++++.+.+..
T Consensus 195 ~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 269 (324)
T cd08288 195 IIDRAE--LSEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAG-GADLPTTVMPFILRGVTLLGIDSV 269 (324)
T ss_pred EEEcch--hhHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecC-CCCCCcchhhhhccccEEEEEEee
Confidence 998876 222355555557899999999754 77888899996 9999998752 223334555555789999987543
Q ss_pred CCCC---CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEEe
Q 016660 330 GLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 383 (385)
Q Consensus 330 ~~~~---~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi~~ 383 (385)
.... .+.+..+.+++..+.+.+ +.+.+++++++++++.+.+++.. |+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 270 MAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred cccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 3221 123555666777775543 35899999999999999887754 888764
No 104
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=6.3e-34 Score=266.61 Aligned_cols=310 Identities=22% Similarity=0.286 Sum_probs=253.2
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++.+++.+ +++.+.+.|.+.+++|+|||.++++|+.|+....+.+.. ..+|.++|||++|+|+++|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 689999886543 778888888889999999999999999999888776532 34678999999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALL------------------------------AG-------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEec------------------------------CC-------------------CceeEEEEcCHHHhccCCCC
Confidence 999996421 11 38999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++.+++.++.++.++|+++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999997 9999999999999999 7899988889999999999988888
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
.........+..++.+ ++|++||++|+.. +..++++++++ |+++.+|.... ....++...++.+++++.+......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T cd05276 191 YRTEDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGG-AKAELDLAPLLRKRLTLTGSTLRSR 267 (323)
T ss_pred CCchhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCC-CCCCCchHHHHHhCCeEEEeeccch
Confidence 7764454556666666 8999999999877 88899999997 99999986432 2234555556678999988865442
Q ss_pred CCC-------CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 332 KAK-------SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 332 ~~~-------~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
... +.+.++++++.++.+.+ +.++.|++++++++++.+.++.. +|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 268 SLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred hhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 111 12456778888886643 46789999999999999987664 37653
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.9e-33 Score=263.04 Aligned_cols=310 Identities=23% Similarity=0.272 Sum_probs=250.7
Q ss_pred eEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCC
Q 016660 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEG 95 (385)
Q Consensus 18 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 95 (385)
||+.+..++.+ +.+.+.+.|.+.+++|+|||.++++|+.|+....+.+.. .+|.++|||++|+|+.+|+++++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666665543 667777777789999999999999999999988776543 457789999999999999999999999
Q ss_pred CEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCC
Q 016660 96 DVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVP 175 (385)
Q Consensus 96 drV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~ 175 (385)
|+|.... . .|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~------------------------------~-------------------~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG------------------------------P-------------------PGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec------------------------------C-------------------CCceeEEEEecHHHceeCCCCCC
Confidence 9997421 0 13899999999999999999999
Q ss_pred cccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCC
Q 016660 176 PNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 176 ~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~ 254 (385)
+.+++.+++.+.++|+++....++.++++|||+|+ |++|++++++|+.+|+ .|++++.++++.++++++|++++++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999999999999998877888999999999996 9999999999999999 789988899999999999999998877
Q ss_pred CCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCC
Q 016660 255 NCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 255 ~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
+......+..++.+ ++|++|||+++. ....++++++++ |+++.+|..... ...++...+..+++++.+.....+..
T Consensus 190 ~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (320)
T cd05286 190 DEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIA 266 (320)
T ss_pred chhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcC
Confidence 64555557777766 899999999985 488999999997 999999864322 23344444547788887654333221
Q ss_pred C-----CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 334 K-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 334 ~-----~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
. +.+.++++++.++.+.+. .++.|+++++.++++.+..+.. +|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 267 TREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred CHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 1 234567788888866543 5688999999999999987765 4888753
No 106
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=8.4e-34 Score=248.77 Aligned_cols=299 Identities=21% Similarity=0.203 Sum_probs=245.2
Q ss_pred cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEe--CCCCCCCCCCCEEEecCCCCC
Q 016660 29 LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESV--GENVDGVVEGDVVIPHFLADC 106 (385)
Q Consensus 29 l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~v--G~~v~~~~~GdrV~~~~~~~~ 106 (385)
+++++.++|+|+++|||+|..|.+++|.....++... .=..|.-+|...+|.++.. -|+.++|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~-SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~----- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAP-SYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV----- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCc-ccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence 9999999999999999999999999996555443322 1123677888877766663 3667889999999632
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccc--ccccc
Q 016660 107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRA--CLLSC 184 (385)
Q Consensus 107 ~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~a--a~l~~ 184 (385)
.+|++|.+++.+.+.+++++.-+..+ ..|..
T Consensus 101 -----------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm 133 (340)
T COG2130 101 -----------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM 133 (340)
T ss_pred -----------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence 18999999999999999876433333 34677
Q ss_pred chhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCeEEeCCCCCchhHH
Q 016660 185 GVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSII 262 (385)
Q Consensus 185 ~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vv~~~~~~~~~~i 262 (385)
+..|||.+|.+.+..++|++|+|.|| |++|..+.|+||..|+ +||++..+++|..++++ +|.+.++||+.+++.+.+
T Consensus 134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L 212 (340)
T COG2130 134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQAL 212 (340)
T ss_pred chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHH
Confidence 89999999999999999999999987 9999999999999999 99999999999999998 999999999998888888
Q ss_pred HHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCC--CCC---cccccHHHHhhcCcEEEEeeecCCCC---C
Q 016660 263 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ--PGS---QLSLSSFEVLHSGKILMGSLFGGLKA---K 334 (385)
Q Consensus 263 ~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~--~~~---~~~~~~~~~~~~~~~i~g~~~~~~~~---~ 334 (385)
.+.++.|.|+.||++|++. +..++..|+.. +|++.+|... +.. ..+-....++.+.+++.|+.+..... .
T Consensus 213 ~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~ 290 (340)
T COG2130 213 KEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFP 290 (340)
T ss_pred HHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhH
Confidence 8888889999999999999 99999999996 9999998532 122 12333456777899999998733221 2
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEEEeCC
Q 016660 335 SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWMGE 385 (385)
Q Consensus 335 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi~~~~ 385 (385)
+.++++..++++|+|..+. +-+-.||.+++||.-|.++++. |+|+++.+
T Consensus 291 e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 291 EALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 4567888999999998884 3345699999999999998875 99999864
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2.4e-33 Score=263.06 Aligned_cols=316 Identities=24% Similarity=0.297 Sum_probs=254.0
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
||++++..++.+ +.+.+.|.|.+.+++|+||+.++++|++|+....+.+. ...+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578888876543 77889999999999999999999999999998877654 245688999999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+..+.. .+ ... |++++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~~------------------------~~-~~~-------------------g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNLG------------------------WG-RRQ-------------------GTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEeccc------------------------cC-CCC-------------------cceeeEEEecHHHcEeCCCC
Confidence 99999765310 00 011 38999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++.+++.+++++.+||+++....++.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.+.++|++++++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999996 9999999999999999 7999988899999999999998888
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
.........+...+.+ ++|+++|++++.. ....+++++.+ |+++.+|... ....++...++.++.++.+......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (325)
T cd08253 196 YRAEDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLLYTA 271 (325)
T ss_pred CCCcCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeehhhc
Confidence 7765555556666666 8999999999876 78889999997 9999998753 2334555555667888877652221
Q ss_pred C---CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 332 K---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 332 ~---~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
. ..+.+..+.+++.++.+.+ +.++.|++++++++++.+.++.. +|+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 272 TPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 1 0123445566777775543 36688999999999999987665 4888753
No 108
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5.3e-34 Score=271.27 Aligned_cols=308 Identities=21% Similarity=0.250 Sum_probs=236.7
Q ss_pred eeEEEeccCCCC---cEEEEeecCCC-CCCeEEEEEeeeecccccccccccCCC---------------CCCCCccccCc
Q 016660 17 CRAAIATAPGEP---LVIDEVIVDPP-NSHEVRVRIICTSLCHSDVTFWKMKDF---------------PAVFPRILGHE 77 (385)
Q Consensus 17 ~~a~~~~~~~~~---l~~~~~~~p~~-~~~eVlVkv~a~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 77 (385)
|||+++.+++++ +++.+.+.|.| .+++|+|||+++++|++|+....+... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 688998888875 88899999999 499999999999999999998876421 23458899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecccccccee
Q 016660 78 AIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFS 157 (385)
Q Consensus 78 ~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~ 157 (385)
++|+|+++|+++++|++||+|+..+.. +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999754210 0124899
Q ss_pred eeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhccCCC----CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE
Q 016660 158 EYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV 232 (385)
Q Consensus 158 ~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~----~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~ 232 (385)
+|+.++.+.++++|+++++..++.+++.+.|||+++.....+.+ +++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998766666654 999999996 9999999999999999 67777
Q ss_pred cCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCc--c
Q 016660 233 DVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQ--L 309 (385)
Q Consensus 233 ~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~ 309 (385)
.+ +++.+.++++|++++++..+..... .+..+ ++|++||++|+. ....++++++++ |+++.+|....... .
T Consensus 194 ~~-~~~~~~~~~~g~~~~~~~~~~~~~~---~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~ 267 (350)
T cd08248 194 CS-TDAIPLVKSLGADDVIDYNNEDFEE---ELTERGKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDKL 267 (350)
T ss_pred eC-cchHHHHHHhCCceEEECCChhHHH---HHHhcCCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccccccc
Confidence 65 4678888999998888876633332 22333 799999999988 489999999997 99999985421111 1
Q ss_pred ccc------HHHHhhc-------CcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe
Q 016660 310 SLS------SFEVLHS-------GKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 376 (385)
Q Consensus 310 ~~~------~~~~~~~-------~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~ 376 (385)
.+. ...+... ...+.... .....+.+.++++++.++.+.+ ++++.|+++++.++++.+.+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~ 343 (350)
T cd08248 268 GLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHA 343 (350)
T ss_pred cccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCC
Confidence 110 0011111 11111110 1112356888999999996543 46789999999999999987765
Q ss_pred -eEEEE
Q 016660 377 -LRCVI 381 (385)
Q Consensus 377 -~k~vi 381 (385)
.|+++
T Consensus 344 ~~~vv~ 349 (350)
T cd08248 344 RGKTVI 349 (350)
T ss_pred ceEEEe
Confidence 47776
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-33 Score=265.27 Aligned_cols=310 Identities=24% Similarity=0.318 Sum_probs=245.4
Q ss_pred eeEEEeccCC--CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 17 CRAAIATAPG--EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 17 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
|||+++.+|+ +.+.+.+.|.|++.+++|+|||.++++|++|+....+.......|.++|||++|+|+.+|++++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 6999999999 35999999999999999999999999999999887776543334678999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|+..+. .... |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~---------------------------~~~~-------------------~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHAS---------------------------LARG-------------------GSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccC---------------------------CCCC-------------------ccceeEEEeCHHHeEECCCCC
Confidence 999975421 1112 389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
++.+++.+++.+.+|++++.+..++.++++|+|+|+ |.+|++++++|+..|+ .|+++. ++++.+.+.++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999998878888999999999998 8999999999999999 677775 6778888889999988887
Q ss_pred CCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC-
Q 016660 254 KNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL- 331 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~- 331 (385)
........+..++.+ ++|+++|++++.. ...++++++++ |+++.++...... ... .+.+++.+....+...
T Consensus 193 ~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~ 265 (325)
T cd08271 193 NDEDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDAS----PDP-PFTRALSVHEVALGAAH 265 (325)
T ss_pred CCccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCc----chh-HHhhcceEEEEEecccc
Confidence 775555557777766 8999999999876 66789999997 9999987542211 111 1223333333222111
Q ss_pred ---------CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 332 ---------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 332 ---------~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
...+.+.+++++++++.+.+ +..+.|+++++.++++.+.++.. .|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 266 DHGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred cccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 01123566788888886654 34588999999999999987765 4888763
No 110
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=1e-33 Score=258.92 Aligned_cols=268 Identities=31% Similarity=0.441 Sum_probs=222.7
Q ss_pred eEEEEEeeeecccccccccccCCC-CCCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCC
Q 016660 43 EVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (385)
Q Consensus 43 eVlVkv~a~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~ 121 (385)
||+|||.++++|+.|+..+.+... ...+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|++|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999888764 345678999999999999999999999999999999999999999997 665
Q ss_pred CCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhccCCC
Q 016660 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (385)
Q Consensus 122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~ 201 (385)
.... .+....| +|++|+.++.+.++++|+++++++++.+++++.|||+++.....+.+
T Consensus 77 ~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LGEGLDG-------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---eccccCC-------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 4442 3333333 99999999999999999999999999999999999998877777799
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCCh
Q 016660 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLA 280 (385)
Q Consensus 202 ~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~ 280 (385)
+++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++++++..+......+. ...+ ++|++||+++..
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~ 212 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGP 212 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCH
Confidence 9999999986699999999999998 899999999999999999999888877755544444 4444 899999999995
Q ss_pred HHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHH
Q 016660 281 SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKR 343 (385)
Q Consensus 281 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 343 (385)
...+.++++++++ |+++.+|....... ......++.+++++.++..... +++++++++
T Consensus 213 ~~~~~~~~~l~~~-G~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 213 ETLAQALRLLRPG-GRIVVVGGTSGGPP-LDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred HHHHHHHHhcccC-CEEEEEccCCCCCC-cccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 5589999999997 99999997643322 2224456778999999875433 466666654
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-33 Score=263.25 Aligned_cols=311 Identities=22% Similarity=0.249 Sum_probs=250.0
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC-CCCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF-PAVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++.+++.+ +++.+.+.|.+.+++|+|||.++++|++|+....+... ....|.++|||++|+|+++|+++.+|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999988865 77888888888999999999999999999988777543 233577899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+.... |.. ...|+|++|+.++.++++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~------------------~~~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLG------------------GLQGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcC------------------CCCCceeEEEEecHHHcccCCCC
Confidence 9999975321 000 01248999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++..++.+++.+.+||+++.+..++.++++++|+|+ |.+|++++++|+..|+ +|+++.++ ++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999999999998878889999999999986 9999999999999999 78888777 8888899999988888
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecC-
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG- 330 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~- 330 (385)
.... ....+..++.+ ++|+++|++++.. +..++++++++ |+++.++... ...+ .....+++++.+.....
T Consensus 195 ~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~ 266 (326)
T cd08272 195 YRET-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDL--APLSFRNATYSGVFTLLP 266 (326)
T ss_pred cchh-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccch--hhHhhhcceEEEEEcccc
Confidence 7764 44457777777 8999999999865 88899999997 9999998652 1222 22335688887775322
Q ss_pred -CC------CCCcHHHHHHHHHcCCCCCCCcee-eeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 331 -LK------AKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 331 -~~------~~~~~~~~~~~~~~g~~~~~~~i~-~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.. ..+.+.+++++++++.+.+ +++ +.|+++++.++++.+.+++. .|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 267 LLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 10 1234667888888886543 344 88999999999999987664 4888764
No 112
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=5e-33 Score=264.86 Aligned_cols=316 Identities=18% Similarity=0.214 Sum_probs=235.6
Q ss_pred eEEEeccCCCCcEEEEeecCCC---CCCeEEEEEeeeecccccccccccCCCCC-CCCccccCceeEEEEEeCCCCC-CC
Q 016660 18 RAAIATAPGEPLVIDEVIVDPP---NSHEVRVRIICTSLCHSDVTFWKMKDFPA-VFPRILGHEAIGVVESVGENVD-GV 92 (385)
Q Consensus 18 ~a~~~~~~~~~l~~~~~~~p~~---~~~eVlVkv~a~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~-~~ 92 (385)
|++++.+++.++++++++.|.| .+++|+|||.++++|++|+..+.+..... ..|.++|+|++|+|+++|++++ +|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888887777766 89999999999999999998775432221 2377899999999999999998 89
Q ss_pred CCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccC----ceE
Q 016660 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIA----HVV 168 (385)
Q Consensus 93 ~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~----~~~ 168 (385)
++||+|+......| + . .|+|++|++++.+ .++
T Consensus 82 ~~Gd~V~~~~~~~~-----------------------~--~-------------------~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY-----------------------G--G-------------------QGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC-----------------------C--C-------------------CceeeEEEEEccccccceeE
Confidence 99999976432110 0 1 2389999999987 789
Q ss_pred ECCCCCCcccccccccchhhhhhhhhhhc-cCCCCCEEEEEcC-CHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHHc
Q 016660 169 KVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF 245 (385)
Q Consensus 169 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~-~~~~~~~VlI~G~-g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~l 245 (385)
++|+++++.+++.+++.+.|||+++.+.. .++++++|+|+|+ |.+|++++++|+.+| .++|+++. ++++.+.++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999886666 7999999999987 899999999999874 43677775 45556678899
Q ss_pred CCCeEEeCCCCC---chhHHHHhhC-C-CccEEEEccCChHHHHHHHHHhc---cCCceEEEeccCCCCC--ccc-----
Q 016660 246 GVTEFVNSKNCG---DKSIIIDMTD-G-GADYCFECVGLASLVQEAYACCR---KGWGKTIVLGVDQPGS--QLS----- 310 (385)
Q Consensus 246 g~~~vv~~~~~~---~~~~i~~~~~-g-~~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~--~~~----- 310 (385)
|+++++++++.. ....+.+.+. + ++|++|||+|+......++++++ ++ |+++.++...... ...
T Consensus 197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~ 275 (352)
T cd08247 197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWD 275 (352)
T ss_pred CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhcc
Confidence 999999887744 3333444443 4 89999999999766889999999 97 9999875221110 000
Q ss_pred ---ccHHHHh----hcCcEEEEeeecCCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 311 ---LSSFEVL----HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 311 ---~~~~~~~----~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
.....+. .+...+....... ..+.+.++++++.++.+. +++++.++++++++|++.+++++. +|++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 276 NPSANARKLFGSLGLWSYNYQFFLLDP--NADWIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccchhhhhhhhhhcCCCcceEEEEecC--CHHHHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 0011111 1122222111111 124577788999999654 346789999999999999987765 498886
Q ss_pred e
Q 016660 383 M 383 (385)
Q Consensus 383 ~ 383 (385)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 3
No 113
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-32 Score=258.34 Aligned_cols=316 Identities=26% Similarity=0.316 Sum_probs=251.5
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+++...+.+ +.+.+.+.|.+.+++|+|+|.++++|+.|+....+.+.. ..+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 578888876643 777788888889999999999999999999887776532 34577899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+..+.. +... .|++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~-------------------------~~~~-------------------~g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAA-------------------------DLGQ-------------------YGTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEecccc-------------------------ccCC-------------------CccceEEEEechHhcEeCCCC
Confidence 99999764321 1111 238999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++.+++.+++++.++|.++.....+.++++|+|+|+ |.+|++++++++..|+ ++++++.++++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999997 9999999999999999 7888888888999888899988888
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
.+.......+..++.+ ++|+++|++++.. ...++++++++ |+++.+|.... ....++....+.+++.+.+......
T Consensus 196 ~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (328)
T cd08268 196 TDEEDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLDEI 272 (328)
T ss_pred cCCccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecccc
Confidence 7765555556677766 8999999999855 88899999997 99999986542 2233444445678998888765432
Q ss_pred CC-CCc----HHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEE
Q 016660 332 KA-KSD----IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 382 (385)
Q Consensus 332 ~~-~~~----~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~ 382 (385)
.. .+. +..+.+++.++.+.+ +.+..|+++++.++++.+.++.. +|++++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 273 TLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 11 112 344455566775544 35688999999999999887765 488876
No 114
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=5.2e-33 Score=262.14 Aligned_cols=306 Identities=20% Similarity=0.204 Sum_probs=238.6
Q ss_pred eeEEEeccCC------CCcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---CCCCCccccCceeEEEEEeCC
Q 016660 17 CRAAIATAPG------EPLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGE 87 (385)
Q Consensus 17 ~~a~~~~~~~------~~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~ 87 (385)
.|||.+.... +.+++.+.|.|++.+++|+|||.++++|+.|.....+... +...+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 3556654433 1288999999999999999999999999987655544321 111245789999999999996
Q ss_pred CCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeecc-Cc
Q 016660 88 NVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDI-AH 166 (385)
Q Consensus 88 ~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~-~~ 166 (385)
+ +|++||+|+.. |+|++|+.++. +.
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 4 79999999631 17999999999 99
Q ss_pred eEECCCCCC--cccccc-cccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH
Q 016660 167 VVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG 242 (385)
Q Consensus 167 ~~~iP~~l~--~~~aa~-l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~ 242 (385)
++++|++++ +..++. +++++.|||+++.+...+.++++|||+|+ |.+|++++++|+..|+ +|+++++++++.+.+
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999995 445555 88899999998877788999999999996 9999999999999999 899998899999999
Q ss_pred HH-cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcc----cccHHHHh
Q 016660 243 KR-FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQL----SLSSFEVL 317 (385)
Q Consensus 243 ~~-lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~ 317 (385)
++ +|+++++++++......+.+++++++|++||++|+.. +..++++++++ |+++.+|........ .++...++
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 264 (329)
T cd05288 187 VEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNII 264 (329)
T ss_pred HhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHh
Confidence 88 9999999988755555566666558999999999854 89999999997 999999864322111 13344556
Q ss_pred hcCcEEEEeeecCCCC--CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 318 HSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 318 ~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
.++.++.+........ .+.+.++++++.++.+.+.+. ..++++++.++++.+.+++. +|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 265 TKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRED--VVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccc--ccccHHHHHHHHHHHhcCCCccceeC
Confidence 7889888876433211 134677888999998776533 45899999999999987665 37663
No 115
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.1e-32 Score=260.10 Aligned_cols=306 Identities=25% Similarity=0.320 Sum_probs=238.1
Q ss_pred eEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 18 RAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 18 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
||+++...+.+ +++.+.+.|.|.+++|+|||.++++|+.|+.++.+.+.. ..+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888887754 888888999999999999999999999999988876543 346889999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|..... . |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR------------------------------V-------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC------------------------------C-------------------cceeeEEEechHHeEECCCCC
Confidence 999974310 1 389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS 253 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~ 253 (385)
++.+++.+++++.|||+++.+..++.++++|+|+|+ |.+|++++++|+..|+ +|+++.. +++.+.++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999998877788999999999997 9999999999999999 7888876 88888889999754 444
Q ss_pred CCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCccccc--HH----------HHhhcCc
Q 016660 254 KNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLS--SF----------EVLHSGK 321 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~~----------~~~~~~~ 321 (385)
...+.... ....+++|+++|++++.. +..++++++.+ |+++.+|........... +. .......
T Consensus 190 ~~~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (331)
T cd08273 190 RTKDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGR 265 (331)
T ss_pred CCcchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccc
Confidence 43232222 333348999999999988 88999999997 999999865322221111 10 0111222
Q ss_pred EEEEeeecCCC------CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 322 ILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 322 ~i~g~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
.+.+....... ..+.+.+++++++++.+.+ ++.+.+++++++++++.+.++.. +|+|+
T Consensus 266 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 266 RATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred eeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 33332211111 1245777889999996653 46688999999999999877665 47765
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.9e-32 Score=257.09 Aligned_cols=312 Identities=22% Similarity=0.256 Sum_probs=252.2
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVV 93 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 93 (385)
|||+.+..++.+ +.+.+.+.|.+.+++|+|||.++++|+.|+....+.+.. ..+|.++|||++|+|+.+|+++.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 578888876654 667777777789999999999999999999888776532 33578899999999999999999999
Q ss_pred CCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCC
Q 016660 94 EGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPT 173 (385)
Q Consensus 94 ~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~ 173 (385)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALV------------------------------AG-------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEcc------------------------------CC-------------------CcceeEEEecHHHcEeCCCC
Confidence 999996421 11 38999999999999999999
Q ss_pred CCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 174 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 174 l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
+++..++.+++++.|+|+++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998778889999999999997 9999999999999999 7888888888888889999988887
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCC
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL 331 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 331 (385)
.........+.....+ ++|+++|++|+.. ...++++++++ |+++.+|...... ..++...++.+++++.+......
T Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T TIGR02824 191 YREEDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRK-AELDLGPLLAKRLTITGSTLRAR 267 (325)
T ss_pred cCchhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCc-CCCChHHHHhcCCEEEEEehhhc
Confidence 7664454556666666 8999999999864 88899999997 9999998643222 25555566688999999875442
Q ss_pred CC-------CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 332 KA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 332 ~~-------~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.. ...+.+++++++++.+.+ +.++.++++++.++++.+.++.. +|+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 268 PVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred chhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 11 112455677888886543 36688999999999999887765 4888753
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=1.2e-31 Score=249.33 Aligned_cols=292 Identities=24% Similarity=0.306 Sum_probs=232.8
Q ss_pred cCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccC
Q 016660 36 VDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRS 114 (385)
Q Consensus 36 ~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~ 114 (385)
.|++.+++|+||+.++++|+.|+....+.+.. ..+|.++|+|++|+|+++|+++++|++||+|+....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence 57788999999999999999999988876543 356889999999999999999999999999975421
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhh
Q 016660 115 KKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW 194 (385)
Q Consensus 115 ~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~ 194 (385)
... |+|++|+.++.+.++++|+++++.+++.+++.+.|||+++
T Consensus 71 -----------------~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 71 -----------------ESM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -----------------CCC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 011 3899999999999999999999999999999999999976
Q ss_pred hhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccE
Q 016660 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADY 272 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~ 272 (385)
+...++++++|+|+|+ |.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.+++..+......+..++++ ++|+
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~ 192 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDV 192 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceE
Confidence 5788999999999975 9999999999999999 79999888899999999999999988775555567777777 8999
Q ss_pred EEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC------CCCcHHHHHHHHHc
Q 016660 273 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMD 346 (385)
Q Consensus 273 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~ 346 (385)
++|++++.. ...++++++++ |+++.+|.........++... +.++..+....+.... ..+.+.++++++++
T Consensus 193 v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
T cd08251 193 VINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEE 269 (303)
T ss_pred EEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHC
Confidence 999997654 88899999997 999999864322222333333 3334444433221111 11346678888888
Q ss_pred CCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016660 347 KELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 381 (385)
Q Consensus 347 g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi 381 (385)
+.+.+ +.++.|+++++.++++.+.++... |+++
T Consensus 270 g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 270 GELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCccC--CCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 86553 356889999999999999877654 7663
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=7.4e-32 Score=251.28 Aligned_cols=301 Identities=21% Similarity=0.284 Sum_probs=240.4
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---CCCCCccccCceeEEEEEeCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDG 91 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~ 91 (385)
|||+++..++.. +.+.+.+.|.+.+++|+|||.++++|+.|+..+.+... ...+|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888887753 56677788888999999999999999999998877542 2345788999999999999999999
Q ss_pred CCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECC
Q 016660 92 VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVD 171 (385)
Q Consensus 92 ~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP 171 (385)
+++||+|+..+.. ... |+|++|+.++...++++|
T Consensus 81 ~~~G~~V~~~~~~---------------------------~~~-------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF---------------------------TRG-------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC---------------------------CCC-------------------CcceeEEEecHHHhccCC
Confidence 9999999754210 011 389999999999999999
Q ss_pred CCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE
Q 016660 172 PTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF 250 (385)
Q Consensus 172 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 250 (385)
+++++..++.+++.+.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+ +|+++..++ +.+.++++|++++
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998777667899999999997 9999999999999999 788777666 8888889999888
Q ss_pred EeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeec
Q 016660 251 VNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG 329 (385)
Q Consensus 251 v~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 329 (385)
++........ .+.+ ++|++||++++.. ...++++++++ |+++.+|..... .. ....+++.+....+.
T Consensus 193 ~~~~~~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~--~~----~~~~~~~~~~~~~~~ 260 (309)
T cd05289 193 IDYTKGDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPA--EQ----AAKRRGVRAGFVFVE 260 (309)
T ss_pred EeCCCCchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcc--hh----hhhhccceEEEEEec
Confidence 8876633322 3344 7999999999884 89999999997 999999864321 11 233456666665443
Q ss_pred CCCCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 330 GLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 330 ~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
.. .+.+.+++++++++.+. +++++.|++++++++++.+.++.. .|+++
T Consensus 261 ~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 261 PD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 22 35788889999988654 346789999999999999887664 36653
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=5e-31 Score=247.08 Aligned_cols=309 Identities=25% Similarity=0.385 Sum_probs=247.9
Q ss_pred eeEEEeccCCCC--cEEEEeecCCCC-CCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCC
Q 016660 17 CRAAIATAPGEP--LVIDEVIVDPPN-SHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGV 92 (385)
Q Consensus 17 ~~a~~~~~~~~~--l~~~~~~~p~~~-~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~ 92 (385)
|+|+++..++.+ +++.+.+ |.+. +++|+||+.++++|+.|+..+.+.+.. ...|.++|||++|+|+.+|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 578888755433 7777777 7666 599999999999999999988776532 3346689999999999999999999
Q ss_pred CCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCC
Q 016660 93 VEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDP 172 (385)
Q Consensus 93 ~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~ 172 (385)
++||+|+... . .|++++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~------------------------------~-------------------~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT------------------------------G-------------------QGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec------------------------------C-------------------CceeEEEEEcCHHHceeCCC
Confidence 9999997531 0 13899999999999999999
Q ss_pred CCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE
Q 016660 173 TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV 251 (385)
Q Consensus 173 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv 251 (385)
++++.+++.+...+.+||.++.....+.++++|+|+|+ |.+|++++++|+..|+ .|++++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999998898899999998777788999999999997 9999999999999999 788888888999999999998888
Q ss_pred eCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecC
Q 016660 252 NSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGG 330 (385)
Q Consensus 252 ~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 330 (385)
+....+....+...+++ ++|+++|++|+.. +..++++++++ |+++.+|...... ..+.....+.+++++.+.....
T Consensus 190 ~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd08241 190 DYRDPDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGEI-PQIPANLLLLKNISVVGVYWGA 266 (323)
T ss_pred ecCCccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCCc-CcCCHHHHhhcCcEEEEEeccc
Confidence 87775555557777776 8999999999854 88899999997 9999998643211 1133334556788888876443
Q ss_pred CCC------CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 331 LKA------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 331 ~~~------~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
+.. .+.+.++++++.++.+. ++.++.|+++++.++++.+.++.. +|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 322 (323)
T cd08241 267 YARREPELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKATGKVVL 322 (323)
T ss_pred ccchhHHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 321 13466788888888654 346788999999999998877665 47775
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.4e-31 Score=247.92 Aligned_cols=311 Identities=22% Similarity=0.304 Sum_probs=243.8
Q ss_pred eEEEeccCCC--CcEEEEeecCCCCCCeEEEEEeeeecccccccccccCCCC-CCCCccccCceeEEEEEeCCCCCCCCC
Q 016660 18 RAAIATAPGE--PLVIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDFP-AVFPRILGHEAIGVVESVGENVDGVVE 94 (385)
Q Consensus 18 ~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 94 (385)
||+.+...+. .+.+.+.+.|.|.+++|+|||.++++|+.|+..+.+.+.. +..|.++|||++|+|+.+|+++.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4556655543 2777788888889999999999999999999988776532 345778999999999999999999999
Q ss_pred CCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCC
Q 016660 95 GDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTV 174 (385)
Q Consensus 95 GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l 174 (385)
||+|+... .. |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLT------------------------------RF-------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEec------------------------------CC-------------------CeeeeEEEecHHHeEECCCCC
Confidence 99997431 01 389999999999999999999
Q ss_pred CcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHHcCCCeEEe
Q 016660 175 PPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVN 252 (385)
Q Consensus 175 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~-G~~~vi~~~~~~~~~~~~~~lg~~~vv~ 252 (385)
++.+++.+++++.++|+++....+++++++|+|+|+ |.+|++++++|+.. +. .++.. ..+++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999999999999998878888999999999997 99999999999988 33 33322 2355778888899988888
Q ss_pred CCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCC--c-------------ccccHHHHh
Q 016660 253 SKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGS--Q-------------LSLSSFEVL 317 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~-------------~~~~~~~~~ 317 (385)
.........++..+++++|+++|++|+.. ...++++++++ |+++.+|...... . ..+....++
T Consensus 190 ~~~~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (337)
T cd08275 190 YRTQDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLI 267 (337)
T ss_pred CCCCcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHh
Confidence 87755555566666558999999999875 78899999997 9999998643211 1 122224556
Q ss_pred hcCcEEEEeeecCCCCC-----CcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 318 HSGKILMGSLFGGLKAK-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 318 ~~~~~i~g~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
.+++++.+......... ..+.++++++.++.+.+ +.++.|++++++++++.+.+++. +|+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 268 SENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred hcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 77888888765422111 13567788888886544 36688999999999999987765 4888864
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=2.3e-30 Score=242.66 Aligned_cols=295 Identities=23% Similarity=0.256 Sum_probs=226.1
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecccccccccccCCC---CCCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCC
Q 016660 30 VIDEVIVDPPNSHEVRVRIICTSLCHSDVTFWKMKDF---PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADC 106 (385)
Q Consensus 30 ~~~~~~~p~~~~~eVlVkv~a~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~ 106 (385)
++.+.|.|.|.+++|+|++.++++|+.|+..+.|.++ ...+|..+|||++|+|+++|++++++++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 7778899999999999999999999999998877652 12346789999999999999999999999999754210
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccccccccch
Q 016660 107 TECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGV 186 (385)
Q Consensus 107 ~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~ 186 (385)
... |+|++|+.++.+.++++|+++++..++.+++.+
T Consensus 93 -------------------------~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KGG-------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CCC-------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 011 389999999999999999999999999999999
Q ss_pred hhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHh
Q 016660 187 STGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDM 265 (385)
Q Consensus 187 ~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~ 265 (385)
.+||+++.....++++++|+|+|+ |++|++++++|+..|+ +|+++..+ ++.+.++++|++++++.....+. ...
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~ 203 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALT 203 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhc
Confidence 999998877777999999999997 9999999999999999 78888754 78888899999888887663332 344
Q ss_pred hCC-CccEEEEccCCh-HHHHHHHHHhccCCceEEEeccCCCCCcccc---cHHHHhhcCcEEEEeeecCCCCCCcHHHH
Q 016660 266 TDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGVDQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDIPIL 340 (385)
Q Consensus 266 ~~g-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 340 (385)
+.+ ++|+++||+|+. ......+..++++ |+++.+|.......... ....... ...+....... ..+.+.++
T Consensus 204 ~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~ 279 (319)
T cd08267 204 AGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGG-GRRLKFFLAKP--NAEDLEQL 279 (319)
T ss_pred cCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccc-cceEEEEEecC--CHHHHHHH
Confidence 455 899999999953 2234444459996 99999987532222211 1111111 22222222111 14578889
Q ss_pred HHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016660 341 LKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 381 (385)
Q Consensus 341 ~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi 381 (385)
+++++++.+. +++++.|++++++++++.+.++... |+++
T Consensus 280 ~~~l~~~~~~--~~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 280 AELVEEGKLK--PVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHCCCee--eeeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 9999998654 3467899999999999999876543 6653
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=1.9e-30 Score=239.26 Aligned_cols=282 Identities=22% Similarity=0.241 Sum_probs=227.2
Q ss_pred CeEEEEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCC
Q 016660 42 HEVRVRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCS 121 (385)
Q Consensus 42 ~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~ 121 (385)
+||+|||.++++|+.|++...+.+ ..+|.++|||++|+|+++|+++++|++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887764 24578999999999999999999999999997431
Q ss_pred CCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhccCCC
Q 016660 122 AFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV 201 (385)
Q Consensus 122 ~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~ 201 (385)
.|+|++|+.++.+.++++|+++++.+++.+++++.|+|.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1389999999999999999999999999999999999998877788999
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcC--CCeEEeCCCCCchhHHHHhhCC-CccEEEEcc
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSIIIDMTDG-GADYCFECV 277 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg--~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~ 277 (385)
+++|+|+|+ |.+|++++++|+.+|+ +|+++..++++.+.++++| ++.+++..+......+.+.+.+ ++|+++|++
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 187 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSL 187 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCC
Confidence 999999975 9999999999999999 7888888889999998888 7788887765555557777766 899999999
Q ss_pred CChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC------CCCcHHHHHHHHHcCCCCC
Q 016660 278 GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELEL 351 (385)
Q Consensus 278 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~~~~ 351 (385)
|+. .+..++++++++ |+++.+|.........+.... +.+++.+.+..+.... ..+.+.+++++++++.+.
T Consensus 188 ~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 263 (293)
T cd05195 188 SGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK- 263 (293)
T ss_pred Cch-HHHHHHHhcccC-ceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc-
Confidence 988 599999999997 999999865322112233222 3346666665432211 012466788888888654
Q ss_pred CCceeeeeecchHHHHHHHHhcCCee-EEEE
Q 016660 352 DKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 381 (385)
Q Consensus 352 ~~~i~~~~~l~~~~~a~~~l~~~~~~-k~vi 381 (385)
++.+..+++++++++++.+.++... |+++
T Consensus 264 -~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 264 -PLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred -cCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 4466789999999999999877654 7653
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=5.6e-30 Score=235.89 Aligned_cols=277 Identities=21% Similarity=0.268 Sum_probs=223.1
Q ss_pred EEEeeeecccccccccccCCCCCCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCC
Q 016660 46 VRIICTSLCHSDVTFWKMKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPF 125 (385)
Q Consensus 46 Vkv~a~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~ 125 (385)
|||.++++|+.|++.+.+.++ .|.++|||++|+|+++|+++++|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998887653 367899999999999999999999999997431
Q ss_pred CCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEE
Q 016660 126 KISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTV 205 (385)
Q Consensus 126 ~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~V 205 (385)
.|+|++|+.++.+.++++|+++++.+++.+++.+.|+|.++.+...+.++++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 13899999999999999999999999999999999999987777889999999
Q ss_pred EEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC--CeEEeCCCCCchhHHHHhhCC-CccEEEEccCChH
Q 016660 206 VIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLAS 281 (385)
Q Consensus 206 lI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~--~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~ 281 (385)
+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|+ +.++++.+......+.+.+++ ++|+++|++++ .
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~-~ 186 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAG-E 186 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCH-H
Confidence 99986 9999999999999999 79999889999999999998 788887775555557777776 89999999996 4
Q ss_pred HHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC-----CCCcHHHHHHHHHcCCCCCCCcee
Q 016660 282 LVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKELELDKFVT 356 (385)
Q Consensus 282 ~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~i~ 356 (385)
....++++++++ |+++.+|.........++... +.+++.+.+..+.... ..+.+.+++++++++.+.+. ..
T Consensus 187 ~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 262 (288)
T smart00829 187 FLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PV 262 (288)
T ss_pred HHHHHHHhccCC-cEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--Cc
Confidence 488899999997 999999864322222333333 3556776665432111 11246677888888876543 45
Q ss_pred eeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 357 HEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 357 ~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
+.|++++++++++.+..+.. +|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 263 TVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred eEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 78999999999999987764 36653
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=7.5e-28 Score=221.57 Aligned_cols=246 Identities=27% Similarity=0.420 Sum_probs=198.2
Q ss_pred CCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceee
Q 016660 69 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 148 (385)
Q Consensus 69 ~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 148 (385)
.+|.++|||++|+|+++|+++++|++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 478999999999999999999999999999742
Q ss_pred ccccccceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCE
Q 016660 149 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 228 (385)
Q Consensus 149 ~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~ 228 (385)
+.|++|+.++.+.++++|+++++.+++.+ +.+.|||+++ ...+++++++|||+|+|.+|++++++|+.+|+++
T Consensus 52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 16899999999999999999999999888 7899999976 4688999999999998999999999999999944
Q ss_pred EEEEcCCchHHHHHHHcC-CCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCC
Q 016660 229 IIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPG 306 (385)
Q Consensus 229 vi~~~~~~~~~~~~~~lg-~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 306 (385)
|+++++++++.++++++| ++.+++..+ ..+.+ ++|++||+++....+..++++++++ |+++.+|.....
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~ 195 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA--------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLK 195 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch--------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCCC
Confidence 999999999999999999 555554432 12234 8999999999877789999999997 999999875432
Q ss_pred CcccccHHHHhhcCcEEEEeeecCC---------CCCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCC--
Q 016660 307 SQLSLSSFEVLHSGKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-- 375 (385)
Q Consensus 307 ~~~~~~~~~~~~~~~~i~g~~~~~~---------~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~-- 375 (385)
. ......+..+.+++.+...... ...+.+.+++++++++.+. +++.+.|+++++.++++.+.+++
T Consensus 196 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~ 271 (277)
T cd08255 196 -P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFEDAPEAYRLLFEDPPE 271 (277)
T ss_pred -c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccccCccCHHHHHHHHHHHHcCCcc
Confidence 1 1122334445667777654321 1125688999999999654 34668899999999999998873
Q ss_pred eeEEEE
Q 016660 376 CLRCVI 381 (385)
Q Consensus 376 ~~k~vi 381 (385)
..|+++
T Consensus 272 ~~k~~~ 277 (277)
T cd08255 272 CLKVVL 277 (277)
T ss_pred ceeeeC
Confidence 348764
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.96 E-value=7.2e-27 Score=204.49 Aligned_cols=294 Identities=20% Similarity=0.173 Sum_probs=224.6
Q ss_pred EEeecC-CCCCCeEEEEEeeeecccccccccccCCCCC-CCCcccc----CceeEEEEEeCCCCCCCCCCCEEEecCCCC
Q 016660 32 DEVIVD-PPNSHEVRVRIICTSLCHSDVTFWKMKDFPA-VFPRILG----HEAIGVVESVGENVDGVVEGDVVIPHFLAD 105 (385)
Q Consensus 32 ~~~~~p-~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~-~~p~~~G----~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~ 105 (385)
.+.+++ ++++++|+||.+|-+..|.....++...+.. -.|..+| ..++|+|++. +.+++++||.|..
T Consensus 27 ~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g----- 99 (343)
T KOG1196|consen 27 TTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWG----- 99 (343)
T ss_pred eeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEE-----
Confidence 344433 4689999999999999988766554333221 1233333 2678999995 5578999999942
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCc--eEECC--CCCCccc-cc
Q 016660 106 CTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAH--VVKVD--PTVPPNR-AC 180 (385)
Q Consensus 106 ~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~--~~~iP--~~l~~~~-aa 180 (385)
.. +|.||.++++.. .+++| .++++.. ..
T Consensus 100 -------------------------~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 100 -------------------------IV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred -------------------------ec----------------------cceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 22 799999997653 44544 3455544 33
Q ss_pred ccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCeEEeCCCC-C
Q 016660 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNC-G 257 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vv~~~~~-~ 257 (385)
++..+..|||..+++.+..++|++|+|-|| |++|+++.|+||.+|+ +|+++.-+++|..+++. ||.+.++||+++ +
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~ 211 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEESD 211 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCccC
Confidence 577789999999999999999999999987 9999999999999999 99999999999998774 799999999997 4
Q ss_pred chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCC---CCCc-ccccHHHHhhcCcEEEEeeecCCCC
Q 016660 258 DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ---PGSQ-LSLSSFEVLHSGKILMGSLFGGLKA 333 (385)
Q Consensus 258 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~---~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~ 333 (385)
..+.+++..+.|+|+.||.+|+.. +...+..|+.. ||++.+|+.. .+.+ .--+...++.|++++.|+....+.+
T Consensus 212 ~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d 289 (343)
T KOG1196|consen 212 LSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLD 289 (343)
T ss_pred HHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhh
Confidence 444477777779999999999999 99999999996 9999999743 1112 2233456778999999987665542
Q ss_pred --CCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEeC
Q 016660 334 --KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWMG 384 (385)
Q Consensus 334 --~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~~ 384 (385)
.+.+..+..++++|+|+...-+ .-.|+..++||.-|..+.. +|.++.+.
T Consensus 290 ~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 290 KYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence 2345667788899988876444 2359999999999888876 59998875
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=1.2e-27 Score=238.10 Aligned_cols=292 Identities=18% Similarity=0.172 Sum_probs=242.8
Q ss_pred cEEEEeecC---CCCCCeEEEEEeeeecccccccccccCCCCCCCC-------ccccCceeEEEEEeCCCCCCCCCCCEE
Q 016660 29 LVIDEVIVD---PPNSHEVRVRIICTSLCHSDVTFWKMKDFPAVFP-------RILGHEAIGVVESVGENVDGVVEGDVV 98 (385)
Q Consensus 29 l~~~~~~~p---~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~vG~~v~~~~~GdrV 98 (385)
++|.+.|.. +..++.=+--|.|+.||.+|+....|..++...| +++|-||+|| .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 777777765 2367777899999999999999999988654333 6889999997 4669999
Q ss_pred EecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEECCCCCCccc
Q 016660 99 IPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR 178 (385)
Q Consensus 99 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~l~~~~ 178 (385)
.|+.... ++++-+.++.+.+|.+|.+...++
T Consensus 1499 ------------------------------M~mvpAk-------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 ------------------------------MGMVPAK-------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred ------------------------------EEeeehh-------------------hhhhhhhcchhhhhhCCcccchhh
Confidence 4444444 899999999999999999999999
Q ss_pred ccccccchhhhhhhhhhhccCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCeEEeC
Q 016660 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNS 253 (385)
Q Consensus 179 aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G-~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vv~~ 253 (385)
|++.||.+.||||||..+...++|++|||++ +|++|++||.+|.+.|+ +|+.+.-+.+|.+++.+ |-..++-|+
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 9999999999999999999999999999995 69999999999999999 88888889999988764 446778899
Q ss_pred CCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCC
Q 016660 254 KNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK 332 (385)
Q Consensus 254 ~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 332 (385)
++.+++..++..|+| |+|+|++....+. ++.+++||+.+ |||..+|...-...-++-+. ++.||.+++|....+.-
T Consensus 1609 RdtsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMa-vfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1609 RDTSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMA-VFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred ccccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhh-hhhcccceeeeehhhhh
Confidence 998888889999999 9999999988777 99999999997 99999997643333344443 45679999998765543
Q ss_pred C--CCcHHHHHHHHHcCCC--CCCCceeeeeecchHHHHHHHHhcCCe-eEEEEEe
Q 016660 333 A--KSDIPILLKRYMDKEL--ELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIWM 383 (385)
Q Consensus 333 ~--~~~~~~~~~~~~~g~~--~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi~~ 383 (385)
. .+.+.++.+++++|.- .+.|+.+++|+-+++++||++|.+++. +|+||++
T Consensus 1686 ege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1686 EGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred cCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 2 2356777888877633 356778999999999999999999887 5999975
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=3.7e-24 Score=168.42 Aligned_cols=108 Identities=35% Similarity=0.541 Sum_probs=95.7
Q ss_pred CCeEEEEEeeeecccccccccccC-CCCCCCCccccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCC
Q 016660 41 SHEVRVRIICTSLCHSDVTFWKMK-DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNL 119 (385)
Q Consensus 41 ~~eVlVkv~a~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~ 119 (385)
|+||||||.++|||++|++++++. .....+|.++|||++|+|+++|+++++|++||||++.+...|+.|.+|+.+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999984 4457889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcccccccCCceeeccccccceeeeEeeccCceEEC
Q 016660 120 CSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSFSEYTVLDIAHVVKV 170 (385)
Q Consensus 120 ~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i 170 (385)
|..... +|...+| +|+||++++++++++|
T Consensus 81 c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 977665 5666666 9999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.77 E-value=7.8e-18 Score=136.77 Aligned_cols=129 Identities=28% Similarity=0.462 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHh
Q 016660 212 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACC 290 (385)
Q Consensus 212 ~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l 290 (385)
++|++++|+|++.|+ +|++++++++|+++++++|+++++++++.+..+.+++.+++ ++|+||||+|.+..++.+++++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 589999999999996 99999999999999999999999999997778889999998 9999999999888899999999
Q ss_pred ccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHHHHHc
Q 016660 291 RKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 346 (385)
Q Consensus 291 ~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~ 346 (385)
+++ |+++.+|... ....+++...++.+++++.|++... .++++++++++++
T Consensus 80 ~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 80 RPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp EEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred ccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 997 9999999875 5678899999999999999997555 4788888888763
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.52 E-value=3.9e-13 Score=128.03 Aligned_cols=175 Identities=14% Similarity=0.156 Sum_probs=138.4
Q ss_pred hhhhhhhcc-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC
Q 016660 190 VGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 190 ~~al~~~~~-~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g 268 (385)
|.++.+..+ ..+|++|+|+|+|.+|+.+++.|+.+|+ +|++++.++.|.+.++.+|++.+ +. .+.+ .
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~~-----~e~v-----~ 256 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-TM-----EEAV-----K 256 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-cH-----HHHH-----c
Confidence 344444444 4689999999999999999999999999 89999999999999999998533 21 1111 2
Q ss_pred CccEEEEccCChHHHHHH-HHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCcHH--HHHHHHH
Q 016660 269 GADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILLKRYM 345 (385)
Q Consensus 269 ~~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~~~~ 345 (385)
++|+||+++|....+... +.+++++ |.++.+|.. ..+++...+..+++++.++..... ..+++ +.+++++
T Consensus 257 ~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~LLa 329 (413)
T cd00401 257 EGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIILLA 329 (413)
T ss_pred CCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhhhh
Confidence 589999999999888865 9999997 999999853 356777778888999988853221 22455 7899999
Q ss_pred cCCC-CCCCceeee-----eecc-hHHHHHHHHhcCCee--EEEEEe
Q 016660 346 DKEL-ELDKFVTHE-----MKFE-EINSAFDLLIKGKCL--RCVIWM 383 (385)
Q Consensus 346 ~g~~-~~~~~i~~~-----~~l~-~~~~a~~~l~~~~~~--k~vi~~ 383 (385)
+|++ ++...++|. ++|+ ++.+++..+.++... |+++.+
T Consensus 330 ~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 330 EGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred CcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 9998 888888888 8999 999999999877643 777654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.38 E-value=6.5e-12 Score=122.68 Aligned_cols=152 Identities=20% Similarity=0.252 Sum_probs=113.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE-EeCCCCC-------------chhHHHH
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCG-------------DKSIIID 264 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-v~~~~~~-------------~~~~i~~ 264 (385)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .....++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 89999999999999999999854 6654321 1111222
Q ss_pred h-hC--CCccEEEEccCCh-----HHH-HHHHHHhccCCceEEEeccCCCC-CcccccHHHHhh-cCcEEEEeeecCCCC
Q 016660 265 M-TD--GGADYCFECVGLA-----SLV-QEAYACCRKGWGKTIVLGVDQPG-SQLSLSSFEVLH-SGKILMGSLFGGLKA 333 (385)
Q Consensus 265 ~-~~--g~~d~vid~~g~~-----~~~-~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~-~~~~i~g~~~~~~~~ 333 (385)
. .+ +++|+||+|++.+ ..+ +++++.++++ |.++.+|...+. -..+.+...++. +++++.|... +.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 2 33 2699999999963 354 8999999997 999999974322 134454455665 7999998752 22
Q ss_pred CCcHH-HHHHHHHcCCCCCCCcee
Q 016660 334 KSDIP-ILLKRYMDKELELDKFVT 356 (385)
Q Consensus 334 ~~~~~-~~~~~~~~g~~~~~~~i~ 356 (385)
..+. .+.+++.++.+++.++++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 3444 589999999887776665
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.26 E-value=2.2e-12 Score=104.20 Aligned_cols=120 Identities=21% Similarity=0.299 Sum_probs=77.2
Q ss_pred cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC--ChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcE
Q 016660 245 FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKI 322 (385)
Q Consensus 245 lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 322 (385)
|||++++||++.++ ...+++|+|||++| +...+..+++++ ++ |+++.++. .........+...
T Consensus 1 LGAd~vidy~~~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~~~ 65 (127)
T PF13602_consen 1 LGADEVIDYRDTDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKGRS 65 (127)
T ss_dssp CT-SEEEETTCSHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHCHH
T ss_pred CCcCEEecCCCccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcccc
Confidence 79999999986332 22348999999999 666457777888 96 99999973 1111111122333
Q ss_pred EEEeeecC-CC---CCCcHHHHHHHHHcCCCCCCCceeeeeecchHHHHHHHHhcCCe-eEEEE
Q 016660 323 LMGSLFGG-LK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVI 381 (385)
Q Consensus 323 i~g~~~~~-~~---~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~a~~~l~~~~~-~k~vi 381 (385)
+.+..+.. .. ..+.++++.+++++|++.+. +.++|||+++.+|++.+++++. +|+||
T Consensus 66 ~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 66 IRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred eEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 33333221 11 23459999999999966654 8899999999999999999886 59986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.63 E-value=4.9e-07 Score=82.91 Aligned_cols=161 Identities=20% Similarity=0.279 Sum_probs=100.7
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHHHc----CCCeEEeCCCCCchhHHHH--hhCC
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSIIID--MTDG 268 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~-~vi~~~~~~~~~~~~~~l----g~~~vv~~~~~~~~~~i~~--~~~g 268 (385)
.+.++++++||.+|+|. |..++++++..|.. +|++++.+++.++.+++. +.+.+-.... + +.. +.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~-d----~~~l~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLG-E----IEALPVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEc-c----hhhCCCCCC
Confidence 35688999999999988 88888888887753 799999999998888763 4332211111 1 222 2234
Q ss_pred CccEEEEcc------CChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEEeeecCCCCCCcHHHHHH
Q 016660 269 GADYCFECV------GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLK 342 (385)
Q Consensus 269 ~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~ 342 (385)
.||+|+... .....++++.+.|+++ |++++.+..... .++ ..+.+...+.+...... ....++.+
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~~----~~~~~~~~~~~~~~~~~---~~~~e~~~ 216 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-ELP----EEIRNDAELYAGCVAGA---LQEEEYLA 216 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CCC----HHHHHhHHHHhccccCC---CCHHHHHH
Confidence 799998543 2345689999999997 999987654322 111 11122222222211111 24556666
Q ss_pred HHHc-CCCCCCCceeeeeecchHHHHHHHH
Q 016660 343 RYMD-KELELDKFVTHEMKFEEINSAFDLL 371 (385)
Q Consensus 343 ~~~~-g~~~~~~~i~~~~~l~~~~~a~~~l 371 (385)
++++ |-..........++++++.++++.+
T Consensus 217 ~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 217 MLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 6665 4333333345667899999999988
No 133
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.47 E-value=1.7e-06 Score=79.08 Aligned_cols=139 Identities=10% Similarity=0.085 Sum_probs=95.1
Q ss_pred ceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhcc---CCCCCEEEEEcC-CHHHHHHHHHHH-HcCCCEE
Q 016660 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI 229 (385)
Q Consensus 155 ~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~---~~~~~~VlI~G~-g~vG~~ai~la~-~~G~~~v 229 (385)
.|.+|.++..+..+.- ... ..-+++-.-+.|+|. +.+... .-..+.|+|.+| +-.++.++.+++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e-~~~~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--ERE-DWQMLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chh-HHHHHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 6778888876655421 111 222333335667775 333221 234466777777 888988888888 5555589
Q ss_pred EEEcCCchHHHHHHHcCC-CeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCC
Q 016660 230 IGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 230 i~~~~~~~~~~~~~~lg~-~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
|.++ |..+....+++|. +.|+.|++ +..+.....-+++|+.|.......+.+.++...-..+.+|.+.
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9995 6777789999998 68888887 4444444667899999999988899999988634567777654
No 134
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.44 E-value=1.6e-06 Score=84.96 Aligned_cols=105 Identities=20% Similarity=0.239 Sum_probs=79.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE-EeCCCC-------------CchhHHHHh
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNC-------------GDKSIIIDM 265 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-v~~~~~-------------~~~~~i~~~ 265 (385)
.++++|+|+|+|.+|+++++.|+.+|+ .|++++.++++++.++++|++.+ ++..+. ++.+..+++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999998763 333210 011112222
Q ss_pred hC---CCccEEEEcc---CChH---HHHHHHHHhccCCceEEEeccCCCC
Q 016660 266 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPG 306 (385)
Q Consensus 266 ~~---g~~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 306 (385)
.. .++|+||+++ |.+. .-++.++.++++ +.+|.++...+.
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 32 2799999999 5432 357889999997 999988875433
No 135
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.37 E-value=1.6e-08 Score=97.96 Aligned_cols=161 Identities=17% Similarity=0.182 Sum_probs=106.2
Q ss_pred cccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecccc
Q 016660 73 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVS 152 (385)
Q Consensus 73 ~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 152 (385)
.-|.|+++.+.+|+++++. +|++.+.+ ||+|.+| ++.|..... .|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 4589999999999998876 66666666 9999999 444543333 4444444
Q ss_pred ccceeeeEeeccCceEECCCCCCcccccccccchhhhhhh---hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEE
Q 016660 153 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGA---AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRI 229 (385)
Q Consensus 153 ~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a---l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~v 229 (385)
.|++++.+.. .+.. -.+++ ..+.+.++.+ +....+..++.+|+|+|+|.+|.++++.++..|+.+|
T Consensus 139 --lf~~a~~~~k-~vr~-~t~i~-------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V 207 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRT-ETDIS-------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI 207 (417)
T ss_pred --HHHHHHHHhh-hhhh-hcCCC-------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence 8999988875 3332 01111 1111122222 1233344678999999999999999999999997689
Q ss_pred EEEcCCchHHH-HHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHH
Q 016660 230 IGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASL 282 (385)
Q Consensus 230 i~~~~~~~~~~-~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~ 282 (385)
++++++.++.+ +++++|.. .+...+ ..+.. .++|+||+|++.+..
T Consensus 208 ~v~~rs~~ra~~la~~~g~~-~i~~~~------l~~~l-~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 208 LIANRTYERAEDLAKELGGE-AVKFED------LEEYL-AEADIVISSTGAPHP 253 (417)
T ss_pred EEEeCCHHHHHHHHHHcCCe-EeeHHH------HHHHH-hhCCEEEECCCCCCc
Confidence 99999888754 66777764 332211 12221 269999999987753
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.30 E-value=5.9e-06 Score=79.44 Aligned_cols=102 Identities=22% Similarity=0.231 Sum_probs=77.9
Q ss_pred hhhhhhhccCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC
Q 016660 190 VGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 190 ~~al~~~~~~~-~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g 268 (385)
|.++.+..++. .|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.+ . .+.. .
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-----l----~eal-~ 266 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-----M----EEAA-E 266 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-----H----HHHH-h
Confidence 44443333444 89999999999999999999999999 899999988887776666764 321 1 1111 2
Q ss_pred CccEEEEccCChHHHH-HHHHHhccCCceEEEeccCC
Q 016660 269 GADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 269 ~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~ 304 (385)
++|+||+++|....+. ..+..++++ +.++.+|...
T Consensus 267 ~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 267 LGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred CCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 6899999999988676 678889996 8888888753
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.14 E-value=1.7e-05 Score=75.81 Aligned_cols=92 Identities=22% Similarity=0.241 Sum_probs=73.7
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
...|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+. +++. .+.+ .+.|++|++.|
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~l-----eeal-----~~aDVVItaTG 259 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMTM-----EEAA-----KIGDIFITATG 259 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCCH-----HHHH-----hcCCEEEECCC
Confidence 3689999999999999999999999999 899998888887777777763 3221 1111 25799999999
Q ss_pred ChHHHHH-HHHHhccCCceEEEeccC
Q 016660 279 LASLVQE-AYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 279 ~~~~~~~-~~~~l~~~~G~~v~~g~~ 303 (385)
....+.. .+..++++ +.++.+|..
T Consensus 260 ~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 260 NKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred CHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 9887764 88889996 888888864
No 138
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.13 E-value=5.9e-05 Score=69.83 Aligned_cols=111 Identities=18% Similarity=0.248 Sum_probs=82.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCCh
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 280 (385)
.+.+|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++.+ ...+ +.+... ++|+||++++..
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~~~------l~~~l~-~aDiVI~t~p~~ 221 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HLSE------LAEEVG-KIDIIFNTIPAL 221 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cHHH------HHHHhC-CCCEEEECCChh
Confidence 68999999999999999999999999 99999999888888888887533 2111 222222 599999999876
Q ss_pred HHHHHHHHHhccCCceEEEeccCCCCCcccccHHHHhhcCcEEEE
Q 016660 281 SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMG 325 (385)
Q Consensus 281 ~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~g 325 (385)
..-+..++.++++ +.++.++...+...+ . ..-.++++..+
T Consensus 222 ~i~~~~l~~~~~g-~vIIDla~~pggtd~--~--~a~~~Gv~~~~ 261 (296)
T PRK08306 222 VLTKEVLSKMPPE-ALIIDLASKPGGTDF--E--YAEKRGIKALL 261 (296)
T ss_pred hhhHHHHHcCCCC-cEEEEEccCCCCcCe--e--ehhhCCeEEEE
Confidence 5456778889997 899988876544332 2 22234555554
No 139
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.12 E-value=6.5e-05 Score=67.93 Aligned_cols=128 Identities=23% Similarity=0.282 Sum_probs=83.6
Q ss_pred ceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhh-ccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 016660 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233 (385)
Q Consensus 155 ~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~ 233 (385)
+|.+|.. +...++.+++++++..+. -+. |.. ++... ..+.++++||-+|+|. |.+++.+++ .|..+|++++
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~t---t~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giD 149 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPT---TRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVD 149 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHH---HHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEE
Confidence 4666644 667889999998877654 221 111 11111 1256889999999987 888876555 5776799999
Q ss_pred CCchHHHHHHHc----CCCeEEeCCCCCchhHHHHhhCC--CccEEEEccCCh---HHHHHHHHHhccCCceEEEeccC
Q 016660 234 VISEKFEIGKRF----GVTEFVNSKNCGDKSIIIDMTDG--GADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 234 ~~~~~~~~~~~l----g~~~vv~~~~~~~~~~i~~~~~g--~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
.++...+.+++. +....+. +..+ .||+|+...... ..++.+.+.|+++ |.+++.|..
T Consensus 150 is~~~l~~A~~n~~~~~~~~~~~------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 150 IDPQAVEAARENAELNGVELNVY------------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CCHHHHHHHHHHHHHcCCCceEE------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 999888877652 2211011 1112 589998655443 3356788899997 999988754
No 140
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.10 E-value=8.6e-06 Score=76.03 Aligned_cols=108 Identities=21% Similarity=0.262 Sum_probs=79.5
Q ss_pred CceEECCCCCCcccccccccchhhhhhhhhhhccC----CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHH-
Q 016660 165 AHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF- 239 (385)
Q Consensus 165 ~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~----~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~- 239 (385)
...+++|+.++.+.++... +.+.++.++. .+.. .++.+|+|+|+|.+|..+++.++..|...|+++++++++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 3677889999888887765 5566666543 2222 4789999999999999999999988877899999988765
Q ss_pred HHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHH
Q 016660 240 EIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASL 282 (385)
Q Consensus 240 ~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~ 282 (385)
++++++|+. +++..+ +.+.. ..+|+||.+++.+..
T Consensus 217 ~la~~~g~~-~~~~~~------~~~~l-~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLDE------LLELL-NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHHH------HHHHH-hcCCEEEECCCCCch
Confidence 677888873 333221 12211 248999999998874
No 141
>PLN02494 adenosylhomocysteinase
Probab=97.96 E-value=7.5e-05 Score=72.20 Aligned_cols=101 Identities=18% Similarity=0.223 Sum_probs=78.3
Q ss_pred hhhhhhhccC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC
Q 016660 190 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 190 ~~al~~~~~~-~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g 268 (385)
+.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|+.. ++ ..+.+ .
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v~-----leEal-----~ 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-LT-----LEDVV-----S 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-cc-----HHHHH-----h
Confidence 3344454443 679999999999999999999999999 8999998888777777777652 21 11111 1
Q ss_pred CccEEEEccCChHHH-HHHHHHhccCCceEEEeccC
Q 016660 269 GADYCFECVGLASLV-QEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 269 ~~d~vid~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 303 (385)
..|++|++.|....+ ...+..++++ +.++.+|..
T Consensus 309 ~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 479999999988754 7899999997 999999874
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.81 E-value=1.2e-05 Score=81.51 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=59.8
Q ss_pred cCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC---------------------chHHHHHHHcCCCeEEeCCC-
Q 016660 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKN- 255 (385)
Q Consensus 198 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~---------------------~~~~~~~~~lg~~~vv~~~~- 255 (385)
....+++|+|+|+|++|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 78888742 35667788999887666433
Q ss_pred CCchhHHHHhhCCCccEEEEccCChH
Q 016660 256 CGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 256 ~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
.+.. ... ...++|+||+++|...
T Consensus 212 ~~~~--~~~-~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDIT--LEQ-LEGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCC--HHH-HHhhCCEEEEeeCCCC
Confidence 1111 111 2236999999999764
No 143
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.77 E-value=0.00022 Score=61.43 Aligned_cols=121 Identities=19% Similarity=0.247 Sum_probs=86.7
Q ss_pred CCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHHcC
Q 016660 171 DPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFG 246 (385)
Q Consensus 171 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~----~~~lg 246 (385)
+..++....-+++-+...|. +.+...++++++||=+|+|. |..++-+|+..| +|+.+++.++-.+. ++.+|
T Consensus 44 d~~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg 118 (209)
T COG2518 44 DRALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLG 118 (209)
T ss_pred CCcccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcC
Confidence 44455555555665555554 55778899999999999987 999999999998 89999988874444 45688
Q ss_pred CCeEE-eCCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEecc
Q 016660 247 VTEFV-NSKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 247 ~~~vv-~~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
...|. ...+ .. ..+... .||.++-..+.+..-+..++.|+++ |+++.--.
T Consensus 119 ~~nV~v~~gD-G~----~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 119 YENVTVRHGD-GS----KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred CCceEEEECC-cc----cCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 75442 2222 11 233333 7999998888887567899999997 99876543
No 144
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.68 E-value=0.00025 Score=65.49 Aligned_cols=97 Identities=20% Similarity=0.242 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc----CCC-eEEeCCCCCchhHHHHhhCCCccEE
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSIIIDMTDGGADYC 273 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l----g~~-~vv~~~~~~~~~~i~~~~~g~~d~v 273 (385)
..++++||-+|+|. |.+++.+++ .|..+|++++.++...+.+++. +.. .+..... + ......++||+|
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDlV 229 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADVI 229 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceEE
Confidence 45789999999988 888877766 5766999999998877766542 221 1111111 0 112223479999
Q ss_pred EEccCCh---HHHHHHHHHhccCCceEEEeccC
Q 016660 274 FECVGLA---SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 274 id~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+...... ..+..+.+.++++ |.++..|..
T Consensus 230 van~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 230 VANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 8755433 3456788999997 999887753
No 145
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.68 E-value=0.00093 Score=61.52 Aligned_cols=96 Identities=20% Similarity=0.271 Sum_probs=71.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCCh
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 280 (385)
.+.+++|+|.|.+|..+++.++.+|+ +|++.++++++.+.+.++|...+ ...+ +.+.. .++|+||++++..
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~~~------l~~~l-~~aDiVint~P~~ 220 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PLNK------LEEKV-AEIDIVINTIPAL 220 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cHHH------HHHHh-ccCCEEEECCChH
Confidence 57899999999999999999999999 89999999888777777775422 1111 22222 2689999999765
Q ss_pred HHHHHHHHHhccCCceEEEeccCCCC
Q 016660 281 SLVQEAYACCRKGWGKTIVLGVDQPG 306 (385)
Q Consensus 281 ~~~~~~~~~l~~~~G~~v~~g~~~~~ 306 (385)
..-...++.++++ ..++.++..+..
T Consensus 221 ii~~~~l~~~k~~-aliIDlas~Pg~ 245 (287)
T TIGR02853 221 VLTADVLSKLPKH-AVIIDLASKPGG 245 (287)
T ss_pred HhCHHHHhcCCCC-eEEEEeCcCCCC
Confidence 4334567788886 788888875433
No 146
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.67 E-value=0.00054 Score=65.48 Aligned_cols=98 Identities=23% Similarity=0.229 Sum_probs=68.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC-
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG- 278 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g- 278 (385)
++.+|+|+|+|.+|+.+++.|+.+|+ +|+++++++++.+.+. .++........+ ...+.+... .+|+||++++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~~~l~~~l~-~aDvVI~a~~~ 240 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN---AYEIEDAVK-RADLLIGAVLI 240 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC---HHHHHHHHc-cCCEEEEcccc
Confidence 34569999999999999999999999 7999999888877665 455432222221 122233322 6899999983
Q ss_pred --C--hHH-HHHHHHHhccCCceEEEeccCC
Q 016660 279 --L--ASL-VQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 279 --~--~~~-~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
. +.. -++.++.++++ +.++.++...
T Consensus 241 ~g~~~p~lit~~~l~~mk~g-~vIvDva~d~ 270 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQ 270 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCC-CEEEEEecCC
Confidence 2 221 26778889997 9999888654
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=97.66 E-value=0.00031 Score=72.87 Aligned_cols=136 Identities=18% Similarity=0.231 Sum_probs=86.2
Q ss_pred ceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 016660 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (385)
Q Consensus 155 ~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~ 233 (385)
++++|..+++..++.+ +..+.+++..-... .....+++++||+|+ |++|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5677887887777777 66666665421100 122346789999996 9999999999999999 899999
Q ss_pred CCchHHHHHH-HcCC--C---eEEeCCCCCchhH-HHHhh--CCCccEEEEccCC-------------------------
Q 016660 234 VISEKFEIGK-RFGV--T---EFVNSKNCGDKSI-IIDMT--DGGADYCFECVGL------------------------- 279 (385)
Q Consensus 234 ~~~~~~~~~~-~lg~--~---~vv~~~~~~~~~~-i~~~~--~g~~d~vid~~g~------------------------- 279 (385)
++.++.+.+. .++. . ...|..+...... +.... .+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 8887765443 3443 1 1234333211111 22211 2479999999982
Q ss_pred hHHHHHHHHHhcc---CCceEEEeccC
Q 016660 280 ASLVQEAYACCRK---GWGKTIVLGVD 303 (385)
Q Consensus 280 ~~~~~~~~~~l~~---~~G~~v~~g~~ 303 (385)
...++.+++.+++ + |+++.++..
T Consensus 534 ~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 534 FLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1223455666655 5 789988764
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.62 E-value=9.7e-05 Score=72.04 Aligned_cols=161 Identities=18% Similarity=0.164 Sum_probs=97.5
Q ss_pred cccCceeEEEEEeCCCCCCCCCCCEEEecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCcccccccCCceeecccc
Q 016660 73 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVS 152 (385)
Q Consensus 73 ~~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 152 (385)
.-|||+++.+.+|+++++..-+|+ +.+ |++|... +..|..... .|...++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk~a----~~~a~~~g~---~g~~l~~----------------- 140 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVKDA----YALAQEAGT---VGTILNR----------------- 140 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 459999999999999987744444 333 5555422 111211111 1212222
Q ss_pred ccceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhhc---cCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEE
Q 016660 153 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA---NVEVGSTVVIFGLGSIGLAVAEGARLCGATRI 229 (385)
Q Consensus 153 ~g~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~~---~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~v 229 (385)
.|++.+.++ ..+..+.+ ....+.+.++.++.... .-.++.+|+|+|+|.+|.++++.++..|+++|
T Consensus 141 --lf~~a~~~~--------k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 141 --LFQKAFSVA--------KRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred --HHHHHHHHH--------hhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 555544443 33332222 22224455555542221 12578999999999999999999999998789
Q ss_pred EEEcCCchHHH-HHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHH
Q 016660 230 IGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASL 282 (385)
Q Consensus 230 i~~~~~~~~~~-~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~ 282 (385)
+++.++.++.+ +++.+|.+ +++..+ ..+.. .++|+||+|+|.+..
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~~~------~~~~l-~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPLDE------LPEAL-AEADIVISSTGAPHP 255 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeHHH------HHHHh-ccCCEEEECCCCCCc
Confidence 99999988855 77778864 333211 12211 268999999998653
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.53 E-value=0.00029 Score=57.24 Aligned_cols=76 Identities=24% Similarity=0.250 Sum_probs=56.0
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCC--eEEeCCCCCchhHHHHhhCCCccEEEE
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSIIIDMTDGGADYCFE 275 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~--~vv~~~~~~~~~~i~~~~~g~~d~vid 275 (385)
--++.+++|+|+|++|.+++..+...|+++|+++.++.+|.+.+ ++++.. .++.+.+ +.... ..+|+||+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~------~~~~~-~~~DivI~ 81 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED------LEEAL-QEADIVIN 81 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG------HCHHH-HTESEEEE
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH------HHHHH-hhCCeEEE
Confidence 34689999999999999999999999998899999998887754 455332 3444444 11111 15999999
Q ss_pred ccCChH
Q 016660 276 CVGLAS 281 (385)
Q Consensus 276 ~~g~~~ 281 (385)
+++.+.
T Consensus 82 aT~~~~ 87 (135)
T PF01488_consen 82 ATPSGM 87 (135)
T ss_dssp -SSTTS
T ss_pred ecCCCC
Confidence 998774
No 150
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.51 E-value=0.00074 Score=65.60 Aligned_cols=92 Identities=22% Similarity=0.224 Sum_probs=72.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
.-.|.+|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. ++ . .++. ...|+|+.+.|
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~~-----l----eell-~~ADIVI~atG 318 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-VT-----L----EDVV-ETADIFVTATG 318 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-cc-----H----HHHH-hcCCEEEECCC
Confidence 4579999999999999999999999999 8999988777765555566542 21 1 1111 25899999999
Q ss_pred ChHHHH-HHHHHhccCCceEEEeccC
Q 016660 279 LASLVQ-EAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 279 ~~~~~~-~~~~~l~~~~G~~v~~g~~ 303 (385)
....+. +.+..|+++ +.++.+|..
T Consensus 319 t~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 319 NKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred cccccCHHHHhccCCC-cEEEEcCCC
Confidence 887664 899999997 999999864
No 151
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.40 E-value=0.0025 Score=55.45 Aligned_cols=102 Identities=20% Similarity=0.385 Sum_probs=69.7
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----HcC-CCeEEeCCCCCchhHHHHhhCC
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFG-VTEFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg-~~~vv~~~~~~~~~~i~~~~~g 268 (385)
....+.++++||-+|+|. |.+++.+++..+. .+|++++.+++..+.++ .+| .+.+..... +....+. ...+
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~-d~~~~l~-~~~~ 110 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG-EAPEILF-TINE 110 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe-chhhhHh-hcCC
Confidence 456788999999999988 9999999987642 38999999998887654 456 333221111 1111121 2234
Q ss_pred CccEEEEccCC---hHHHHHHHHHhccCCceEEEe
Q 016660 269 GADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 269 ~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 300 (385)
.+|.||...+. ...++.+.+.|+++ |+++..
T Consensus 111 ~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 111 KFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 79999985543 34577888999997 998853
No 152
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.16 E-value=0.003 Score=60.71 Aligned_cols=113 Identities=18% Similarity=0.217 Sum_probs=76.2
Q ss_pred ccccchhhhhhhhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchh
Q 016660 181 LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS 260 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~ 260 (385)
.+..+-...+..+.+..+++++++||-+|+|. |.++..+++..|+ +|++++.+++..+.+++.....-+.....+
T Consensus 147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--- 221 (383)
T PRK11705 147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--- 221 (383)
T ss_pred CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc---
Confidence 34444444455556777889999999999854 7778888988898 899999999999988764321111111101
Q ss_pred HHHHhhCCCccEEEEc-----cCC---hHHHHHHHHHhccCCceEEEec
Q 016660 261 IIIDMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 261 ~i~~~~~g~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 301 (385)
...+ .+.||.|+.. +|. ...++.+.+.|+++ |.+++..
T Consensus 222 -~~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 222 -YRDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hhhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 1222 3479988743 333 34578899999997 9988754
No 153
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.15 E-value=0.0053 Score=52.66 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=74.0
Q ss_pred CCCEEEEEc-C-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCC-eEEeCCCCCchh----HHHHhhCCCccE
Q 016660 201 VGSTVVIFG-L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKS----IIIDMTDGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G-~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~-~vv~~~~~~~~~----~i~~~~~g~~d~ 272 (385)
....|||.| + |++|.+.+.-....|+ .|+++.+.-++...+. ++|.. .=+|..+++... .+++..+|..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 456799997 4 9999999888889999 9999999988887666 77753 224444422211 155666678999
Q ss_pred EEEccCCh----------HHHH----------------HHHHHhccCCceEEEeccCCCCCcccc
Q 016660 273 CFECVGLA----------SLVQ----------------EAYACCRKGWGKTIVLGVDQPGSQLSL 311 (385)
Q Consensus 273 vid~~g~~----------~~~~----------------~~~~~l~~~~G~~v~~g~~~~~~~~~~ 311 (385)
.++.+|-+ .+++ ....+++.. |++|.+|...+-.++++
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf 148 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF 148 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence 99977753 1111 224456775 99999987654333443
No 154
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.11 E-value=0.0088 Score=50.56 Aligned_cols=103 Identities=21% Similarity=0.293 Sum_probs=70.2
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCCeEEeCCCCCchhHHHHhhCC-C
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSIIIDMTDG-G 269 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~vv~~~~~~~~~~i~~~~~g-~ 269 (385)
...++++++.++=+|+|. |-.+++++...-..+|+++++++++++..+ +||.+.+..... +.+.. +.+- .
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g--~Ap~~--L~~~~~ 102 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG--DAPEA--LPDLPS 102 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec--cchHh--hcCCCC
Confidence 356789999877778755 666778885444449999999999887654 689875432222 22221 1122 5
Q ss_pred ccEEEEccCC--hHHHHHHHHHhccCCceEEEeccC
Q 016660 270 ADYCFECVGL--ASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 270 ~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+|.+|=--|. +..++.++..|+++ |++|.-..+
T Consensus 103 ~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 103 PDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred CCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 9999855443 24478999999997 999876654
No 155
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.05 E-value=0.009 Score=50.90 Aligned_cols=94 Identities=19% Similarity=0.231 Sum_probs=63.9
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCC----
Q 016660 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGL---- 279 (385)
Q Consensus 205 VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~---- 279 (385)
|+|+|+ |.+|...++.+...|+ +|+++.+++++.+. ..+++.+ ..+- .....+.+... ++|.||+++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~-~~d~-~d~~~~~~al~-~~d~vi~~~~~~~~~ 74 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEII-QGDL-FDPDSVKAALK-GADAVIHAAGPPPKD 74 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEE-ESCT-TCHHHHHHHHT-TSSEEEECCHSTTTH
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccc-eeee-hhhhhhhhhhh-hcchhhhhhhhhccc
Confidence 789998 9999999999999998 89999999998777 3444433 2222 22233444443 69999999984
Q ss_pred hHHHHHHHHHhccC-CceEEEeccCC
Q 016660 280 ASLVQEAYACCRKG-WGKTIVLGVDQ 304 (385)
Q Consensus 280 ~~~~~~~~~~l~~~-~G~~v~~g~~~ 304 (385)
.......++.++.. -.+++.++...
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccceeeeccc
Confidence 23355566665443 13777776543
No 156
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0072 Score=55.21 Aligned_cols=76 Identities=21% Similarity=0.296 Sum_probs=53.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE-EeCCCCCchhH-HHHhh--CCCccEEEEcc
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSI-IIDMT--DGGADYCFECV 277 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-v~~~~~~~~~~-i~~~~--~g~~d~vid~~ 277 (385)
.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+...... +.... .+++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 46899987 9999999999998999 89999888887776666565433 45444222222 22222 23699999999
Q ss_pred CC
Q 016660 278 GL 279 (385)
Q Consensus 278 g~ 279 (385)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 83
No 157
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.01 E-value=0.0032 Score=55.42 Aligned_cols=78 Identities=21% Similarity=0.281 Sum_probs=57.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCC----CeEEeCCCCCc-hhHHHHhhCC--Ccc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV----TEFVNSKNCGD-KSIIIDMTDG--GAD 271 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~----~~vv~~~~~~~-~~~i~~~~~g--~~d 271 (385)
+++.++|.|| +++|.+.++.+...|+ +|+.+.+..++++.+ .+++. ...+|..+... ...+..+... .+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 4577899998 9999999999999999 899999999988865 46772 23456555322 2224444444 599
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++++..|.
T Consensus 84 iLvNNAGl 91 (246)
T COG4221 84 ILVNNAGL 91 (246)
T ss_pred EEEecCCC
Confidence 99998885
No 158
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=97.01 E-value=0.012 Score=46.39 Aligned_cols=101 Identities=21% Similarity=0.330 Sum_probs=67.5
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCCe--EEeCCCCCchhHHHHhhCC
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~--vv~~~~~~~~~~i~~~~~g 268 (385)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++ .++... ++..+- .. ......+
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~ 87 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA-PE---ALEDSLP 87 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc-cc---cChhhcC
Confidence 445667788999999877 888999998765448999999988777654 344432 222211 00 0111123
Q ss_pred CccEEEEccCC---hHHHHHHHHHhccCCceEEEec
Q 016660 269 GADYCFECVGL---ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 269 ~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 301 (385)
.+|+|+-..+. ...++.+.+.|+++ |.++...
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 79999875433 23578899999997 9988653
No 159
>PRK14967 putative methyltransferase; Provisional
Probab=97.01 E-value=0.033 Score=49.34 Aligned_cols=98 Identities=19% Similarity=0.173 Sum_probs=63.2
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhhCCCcc
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMTDGGAD 271 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~~g~~d 271 (385)
...+.++++||-.|+|. |.+++.+++. +..+|++++.+++..+.+++ .+....+...+ ... .+..+.||
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d--~~~---~~~~~~fD 103 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGD--WAR---AVEFRPFD 103 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECc--hhh---hccCCCee
Confidence 34577889999999987 8888888875 55589999999887775543 34332222122 111 11223799
Q ss_pred EEEEccCC---------------------------hHHHHHHHHHhccCCceEEEec
Q 016660 272 YCFECVGL---------------------------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 272 ~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
+|+...+. ...+..+.+.|+++ |+++++-
T Consensus 104 ~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 104 VVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred EEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 99864210 11245677889997 9988653
No 160
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.00 E-value=0.0034 Score=53.54 Aligned_cols=78 Identities=21% Similarity=0.265 Sum_probs=58.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC---CeEEeCCCCCchhHHHHhh-CC--CccEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV---TEFVNSKNCGDKSIIIDMT-DG--GADYC 273 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~---~~vv~~~~~~~~~~i~~~~-~g--~~d~v 273 (385)
.|.+|||.|+ +++|+..++-...+|= +||.+.+++++++.+++.-. ..+.|..+.+....+..+. +. ..+++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 4789999975 9999999999999997 89999999999998886442 3566666644444433333 23 57999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
++++|-
T Consensus 83 iNNAGI 88 (245)
T COG3967 83 INNAGI 88 (245)
T ss_pred eecccc
Confidence 998874
No 161
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.99 E-value=0.0094 Score=55.70 Aligned_cols=103 Identities=21% Similarity=0.305 Sum_probs=71.6
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----HcCCCeEEeCCCCCchhHHHHhhC
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSIIIDMTD 267 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg~~~vv~~~~~~~~~~i~~~~~ 267 (385)
+.+...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ ++|.+.+..... +....+.. .
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D~~~~~~~--~ 147 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-DGYYGVPE--F 147 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-Chhhcccc--c
Confidence 33556788999999999974 9999999998764 26999999988766554 366654432222 11110111 1
Q ss_pred CCccEEEEccCChHHHHHHHHHhccCCceEEEe
Q 016660 268 GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 268 g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
+.||+|+.+.+.........+.++++ |+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 26999999888776566788999997 987763
No 162
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.94 E-value=0.019 Score=51.75 Aligned_cols=80 Identities=24% Similarity=0.263 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-----cCCC-eE--EeCCCCCchhHHHH-hh-C
Q 016660 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EF--VNSKNCGDKSIIID-MT-D 267 (385)
Q Consensus 199 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-----lg~~-~v--v~~~~~~~~~~i~~-~~-~ 267 (385)
...+.++||.|| +++|...+..+...|+ +++.+.++.+|++.+.+ .|.. ++ +|..+.+....+.. +. .
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 346789999998 9999999999999999 89999999999886542 2322 12 35545333333332 22 2
Q ss_pred C-CccEEEEccCC
Q 016660 268 G-GADYCFECVGL 279 (385)
Q Consensus 268 g-~~d~vid~~g~ 279 (385)
+ .+|+.++++|.
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 2 69999999986
No 163
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.92 E-value=0.017 Score=51.42 Aligned_cols=101 Identities=21% Similarity=0.187 Sum_probs=64.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHc---CCCeEE--eCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFV--NSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l---g~~~vv--~~~~~~~~~~-i~~~~--~g~~ 270 (385)
++++|||.|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+ |..+...... +.... -+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999997 9999999999999999 899998888776554 222 222332 2222111111 11111 1357
Q ss_pred cEEEEccCCh-----------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 271 DYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 271 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
|.++.+.+.. ..++..+++++++ |+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 9999888742 1144556677776 899988864
No 164
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0061 Score=57.48 Aligned_cols=78 Identities=27% Similarity=0.354 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCeEEeCCCCCchhHHHHhh------CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSIIIDMT------DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~vv~~~~~~~~~~i~~~~------~g~ 269 (385)
++.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++.|.+..+..-+....+.+.++. .++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5678999997 9999999999999999 788898888776533 345654322111212222222221 247
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 85 iD~lVnnAG~ 94 (330)
T PRK06139 85 IDVWVNNVGV 94 (330)
T ss_pred CCEEEECCCc
Confidence 9999999984
No 165
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0062 Score=55.82 Aligned_cols=78 Identities=17% Similarity=0.215 Sum_probs=54.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE-EeCCCCCchhH-HHH---hhCCCccEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSI-IID---MTDGGADYCF 274 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-v~~~~~~~~~~-i~~---~~~g~~d~vi 274 (385)
.+.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+...... +.. ...+.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 3568999997 9999999999888999 89999998888877766665433 34444222111 222 2234789999
Q ss_pred EccCC
Q 016660 275 ECVGL 279 (385)
Q Consensus 275 d~~g~ 279 (385)
+++|.
T Consensus 82 ~~Ag~ 86 (277)
T PRK05993 82 NNGAY 86 (277)
T ss_pred ECCCc
Confidence 98863
No 166
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.84 E-value=0.022 Score=50.04 Aligned_cols=100 Identities=17% Similarity=0.267 Sum_probs=68.7
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHH----cCCCe--EEeCCCCCchhHHHHh
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSIIIDM 265 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~----lg~~~--vv~~~~~~~~~~i~~~ 265 (385)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ +|... ++..+... .+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~------~~ 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL------GY 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc------CC
Confidence 44566789999999999876 7778888887753 289999999887776653 45432 22222100 11
Q ss_pred hC-CCccEEEEccCChHHHHHHHHHhccCCceEEEe
Q 016660 266 TD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 266 ~~-g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
.. +.||+|+-........+...+.|+++ |+++..
T Consensus 141 ~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 12 37999976555555567889999997 998775
No 167
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.023 Score=50.90 Aligned_cols=100 Identities=15% Similarity=0.121 Sum_probs=59.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch-HHHH----HHHcCCC-eE--EeCCCCCchhH-HHHhhC--C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEI----GKRFGVT-EF--VNSKNCGDKSI-IIDMTD--G 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~-~~~~----~~~lg~~-~v--v~~~~~~~~~~-i~~~~~--g 268 (385)
++.++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+. ++..+.. .. .|..+...... +..... +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4678999997 9999999999888999 7888776543 3222 2223332 11 23333211111 222111 3
Q ss_pred CccEEEEccCCh-------------------HHHHHHHHHhccCCceEEEecc
Q 016660 269 GADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 269 ~~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
++|++|.+.|.. ..++.+.+.+..+ |+++.++.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 689999887642 2245555666665 88888765
No 168
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.82 E-value=0.01 Score=45.98 Aligned_cols=92 Identities=24% Similarity=0.353 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCCchHHHHHHHc----CC-CeE-EeCCCCCchhHHHHhh-CCCccE
Q 016660 201 VGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIGKRF----GV-TEF-VNSKNCGDKSIIIDMT-DGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~-~~G~~~vi~~~~~~~~~~~~~~l----g~-~~v-v~~~~~~~~~~i~~~~-~g~~d~ 272 (385)
|+.+||-+|+|. |.+++.+++ ..+. +|++++.+++..+.+++. +. +++ +-..+ . . .... .++||+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~-~--~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD--A-E--FDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC--C-H--GGTTTSSCEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc--c-c--cCcccCCCCCE
Confidence 678999999876 778888888 5677 899999999988877652 22 222 22222 2 1 1222 227999
Q ss_pred EEEcc-CC---h------HHHHHHHHHhccCCceEEEe
Q 016660 273 CFECV-GL---A------SLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 273 vid~~-g~---~------~~~~~~~~~l~~~~G~~v~~ 300 (385)
|+... .. . ..++.+.+.|+++ |+++.-
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99877 21 1 2378899999997 988753
No 169
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.79 E-value=0.017 Score=54.94 Aligned_cols=97 Identities=15% Similarity=0.158 Sum_probs=72.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcC---C-CeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---V-TEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 203 ~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg---~-~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
.+|||+|+|.+|..+++.+-+.|-..|++++++.++.+.+.... . ...+|-.+ .. .+.++.. ++|+||++.+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~-al~~li~-~~d~VIn~~p 77 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VD-ALVALIK-DFDLVINAAP 77 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hH-HHHHHHh-cCCEEEEeCC
Confidence 46899999999999999988888448999999988888876654 2 23455444 22 2444444 3599999999
Q ss_pred ChHHHHHHHHHhccCCceEEEeccCC
Q 016660 279 LASLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 279 ~~~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
.....+.+-.|++.+ -.++..+...
T Consensus 78 ~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 78 PFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred chhhHHHHHHHHHhC-CCEEEcccCC
Confidence 988777666778885 7788887654
No 170
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.77 E-value=0.016 Score=50.70 Aligned_cols=101 Identities=15% Similarity=0.175 Sum_probs=67.5
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHH----HcCCC---eEEeCCCCCchhHHHH
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVT---EFVNSKNCGDKSIIID 264 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~----~lg~~---~vv~~~~~~~~~~i~~ 264 (385)
+.+...++++++||=+|+|. |..++.+++..+ ..+|++++.+++-.+.++ ..+.. .++..+-... +.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~~- 138 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---LE- 138 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---Cc-
Confidence 44556778899999999866 777788888764 228999999988766554 34432 2222221000 00
Q ss_pred hhCCCccEEEEccCChHHHHHHHHHhccCCceEEEe
Q 016660 265 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 265 ~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
..+.||.|+-........+++.+.|+++ |+++..
T Consensus 139 -~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 -KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred -cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999987766666567888999997 998764
No 171
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.76 E-value=0.017 Score=49.72 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=60.7
Q ss_pred ccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE-EeCCCCCchhHHHHhhCC-CccEEE
Q 016660 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSIIIDMTDG-GADYCF 274 (385)
Q Consensus 197 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-v~~~~~~~~~~i~~~~~g-~~d~vi 274 (385)
..++++++||.+|+|.-++......+..+..+|++++.++.+ ...++..+ .|..+......+.+..++ ++|+|+
T Consensus 28 ~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~V~ 103 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDVVM 103 (188)
T ss_pred cccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCccEEE
Confidence 456899999999987755433333334343489999998764 11233322 233332222224444445 799999
Q ss_pred E-cc----CC------------hHHHHHHHHHhccCCceEEEec
Q 016660 275 E-CV----GL------------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 275 d-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
. .. |. ...++.+.++|+++ |+++...
T Consensus 104 ~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 104 SDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 4 32 21 34577889999997 9988754
No 172
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.029 Score=50.21 Aligned_cols=78 Identities=19% Similarity=0.213 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCC-eEE--eCCCCCchhHHHH-hh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSIIID-MT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~vv--~~~~~~~~~~i~~-~~--~g~ 269 (385)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.. ++.+.. .++ |..+......+.+ .. -++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999997 9999999999999999 788888777655433 223432 222 3333111111111 11 146
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.++|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 173
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.70 E-value=0.0098 Score=57.64 Aligned_cols=77 Identities=16% Similarity=0.141 Sum_probs=55.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEcc
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECV 277 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~ 277 (385)
--.+.+|||+|+|.+|.+++..+...|++.++++.++.++.+. +.+++...++.+.+ +..... .+|+||.|+
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~------l~~~l~-~aDiVI~aT 250 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSE------LPQLIK-KADIIIAAV 250 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHHH------HHHHhc-cCCEEEECc
Confidence 3467899999999999999999999998889999999877554 44555222332221 222222 589999999
Q ss_pred CChHH
Q 016660 278 GLASL 282 (385)
Q Consensus 278 g~~~~ 282 (385)
+.++.
T Consensus 251 ~a~~~ 255 (414)
T PRK13940 251 NVLEY 255 (414)
T ss_pred CCCCe
Confidence 98864
No 174
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.69 E-value=0.029 Score=56.11 Aligned_cols=105 Identities=13% Similarity=0.123 Sum_probs=66.7
Q ss_pred hhccCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH---------cCC-----CeE--EeCCCCC
Q 016660 195 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---------FGV-----TEF--VNSKNCG 257 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~---------lg~-----~~v--v~~~~~~ 257 (385)
...+.+.+.+|||.|+ |.+|..+++.+...|+ +|+++.++.++.+.+.+ .|. ..+ .|..+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-- 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-- 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC--
Confidence 4556778999999997 9999999999988999 88888888877654321 121 112 23322
Q ss_pred chhHHHHhhCCCccEEEEccCChH---------------HHHHHHHHhcc-CCceEEEeccCC
Q 016660 258 DKSIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRK-GWGKTIVLGVDQ 304 (385)
Q Consensus 258 ~~~~i~~~~~g~~d~vid~~g~~~---------------~~~~~~~~l~~-~~G~~v~~g~~~ 304 (385)
...+.+.. +++|+||+++|... ....+++.+.. +.+++|+++...
T Consensus 150 -~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 -PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred -HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 22244333 36999999988531 12233343332 226899887643
No 175
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.032 Score=52.76 Aligned_cols=78 Identities=18% Similarity=0.119 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCeE---EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF---VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~v---v~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+...... +.... -++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4678999997 9999999999988999 888888887765533 23454322 23333211111 11111 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 86 iD~lInnAg~ 95 (334)
T PRK07109 86 IDTWVNNAMV 95 (334)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 176
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.63 E-value=0.0065 Score=53.12 Aligned_cols=101 Identities=20% Similarity=0.301 Sum_probs=67.8
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-EEEEEcCCchHHHHHH----HcCCCeE-EeCCCCCchhHHHHhh
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGK----RFGVTEF-VNSKNCGDKSIIIDMT 266 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~-~vi~~~~~~~~~~~~~----~lg~~~v-v~~~~~~~~~~i~~~~ 266 (385)
+.+...++++++||-+|+|. |..++-+++..|.. +|+.++..++-.+.++ .++.+.| +...+ .. ..+.
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd--g~---~g~~ 137 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD--GS---EGWP 137 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---GG---GTTG
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc--hh---hccc
Confidence 55677899999999999876 88999999988743 6999998877555443 4566533 22222 11 1111
Q ss_pred C-CCccEEEEccCChHHHHHHHHHhccCCceEEEe
Q 016660 267 D-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 267 ~-g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
. +.||.|+-..+.+..-...++.|+.+ |++|.-
T Consensus 138 ~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 138 EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 2 27999998888777567889999997 998873
No 177
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.039 Score=49.99 Aligned_cols=78 Identities=21% Similarity=0.236 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcCCCe-E--EeCCCCCchhH-HHHhh--CCCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-F--VNSKNCGDKSI-IIDMT--DGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~~~-v--v~~~~~~~~~~-i~~~~--~g~~d~ 272 (385)
++.++||.|+ |++|...++.+...|+ +|+.++++.++.+. .++++... + .|..+...... +.... -+.+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999987 9999999999988999 89999888775443 34455321 2 23333111111 22211 136899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|++.|.
T Consensus 84 lv~~ag~ 90 (261)
T PRK08265 84 LVNLACT 90 (261)
T ss_pred EEECCCC
Confidence 9998874
No 178
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.04 Score=49.69 Aligned_cols=78 Identities=18% Similarity=0.150 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH---cCCC-eE--EeCCCCCchhH-HHHhhC--CCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSI-IIDMTD--GGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~---lg~~-~v--v~~~~~~~~~~-i~~~~~--g~~ 270 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++++++.+..++ .+.. .. .|..+...... +..... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999997 9999999988888999 67778777776544443 3432 12 23332111111 222211 368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
No 179
>PRK12742 oxidoreductase; Provisional
Probab=96.56 E-value=0.043 Score=48.73 Aligned_cols=98 Identities=24% Similarity=0.350 Sum_probs=61.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-CchHHH-HHHHcCCCeE-EeCCCCCchhHHHHhhC--CCccEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFE-IGKRFGVTEF-VNSKNCGDKSIIIDMTD--GGADYCF 274 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~-~~~~~~-~~~~lg~~~v-v~~~~~~~~~~i~~~~~--g~~d~vi 274 (385)
++.+|||+|+ |++|...++.+...|+ +|+.+.+ ++++.+ +..++++..+ .|..+ ...+.+... +.+|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~---~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD---RDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC---HHHHHHHHHHhCCCcEEE
Confidence 4678999997 9999999999999999 6766643 444443 3345565432 23322 222333222 3689999
Q ss_pred EccCChH-------------------------HHHHHHHHhccCCceEEEeccC
Q 016660 275 ECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 275 d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+++|... ....++..++.+ |+++.++..
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~ 133 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV 133 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence 9987521 013444556665 899988764
No 180
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.55 E-value=0.0084 Score=51.14 Aligned_cols=91 Identities=29% Similarity=0.300 Sum_probs=61.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
--.+.+|.|+|.|.+|...+++++.+|+ +|++.+++.+........+.. +.+ ..+ +.. ..|+|+.+.+
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~----~~~--l~e-ll~----~aDiv~~~~p 100 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE----YVS--LDE-LLA----QADIVSLHLP 100 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE----ESS--HHH-HHH----H-SEEEE-SS
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce----eee--hhh-hcc----hhhhhhhhhc
Confidence 4568999999999999999999999999 999999888776645555542 112 211 111 2688887776
Q ss_pred ChH-H----HHHHHHHhccCCceEEEecc
Q 016660 279 LAS-L----VQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 279 ~~~-~----~~~~~~~l~~~~G~~v~~g~ 302 (385)
... + =.+.+..++++ ..+|.++-
T Consensus 101 lt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 101 LTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred cccccceeeeeeeeeccccc-eEEEeccc
Confidence 321 1 14677888886 77777653
No 181
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.51 E-value=0.014 Score=58.15 Aligned_cols=75 Identities=21% Similarity=0.235 Sum_probs=55.4
Q ss_pred cCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEcc
Q 016660 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECV 277 (385)
Q Consensus 198 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~ 277 (385)
.+.++++|+|+|.|.+|++++++++..|+ +|++++..+++.+.++++|+.. +.... ....+ ..+|+||.+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l-----~~~D~VV~Sp 78 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQI-----ADYALVVTSP 78 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHh-----hcCCEEEECC
Confidence 35678899999999999999999999999 8999997767666677778743 32221 11111 1479999988
Q ss_pred CChH
Q 016660 278 GLAS 281 (385)
Q Consensus 278 g~~~ 281 (385)
|-+.
T Consensus 79 Gi~~ 82 (488)
T PRK03369 79 GFRP 82 (488)
T ss_pred CCCC
Confidence 8753
No 182
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.50 E-value=0.027 Score=47.41 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=63.2
Q ss_pred ccccccchhhhhhhhhhhccCCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCC
Q 016660 179 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 257 (385)
Q Consensus 179 aa~l~~~~~ta~~al~~~~~~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~ 257 (385)
....||...++...+.....--.+.+|||+|+|. +|..++..++..|+ +|+++.++.+.
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~------------------- 80 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN------------------- 80 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh-------------------
Confidence 3445654444444333333346889999999986 59989999999999 78888765211
Q ss_pred chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccC
Q 016660 258 DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 258 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+.+... .+|+||.+++.++.+.. +.++++ -.++.++..
T Consensus 81 ----l~~~l~-~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 81 ----LKEHTK-QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred ----HHHHHh-hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 111111 48999999999874433 346664 566777754
No 183
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.50 E-value=0.0083 Score=55.23 Aligned_cols=135 Identities=22% Similarity=0.298 Sum_probs=72.9
Q ss_pred ceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhhh-ccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 016660 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233 (385)
Q Consensus 155 ~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~~-~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~ 233 (385)
.|.+|-.-+...++.+.+++.+... ....|... +... .-..++++||=+|+|. |.+++..+| +|+++|++++
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lc-l~~l~~~~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~D 191 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLC-LELLEKYVKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAID 191 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SS----HCHHHHHH-HHHHHHHSSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEE
T ss_pred CCcccCCCCCcEEEEECCCCcccCC----CCHHHHHH-HHHHHHhccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEec
Confidence 4555522244556777766643322 12222221 2111 1267889999998754 666655555 4988999999
Q ss_pred CCchHHHHHHH----cCCC-eEEeCCCCCchhHHHHhhCCCccEEEEccCChHH---HHHHHHHhccCCceEEEeccCC
Q 016660 234 VISEKFEIGKR----FGVT-EFVNSKNCGDKSIIIDMTDGGADYCFECVGLASL---VQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 234 ~~~~~~~~~~~----lg~~-~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
.++.-.+.+++ -|.. .+.-... .....+.||+|+-..-.... .....+.++++ |.+++.|...
T Consensus 192 iDp~Av~~a~~N~~~N~~~~~~~v~~~-------~~~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 192 IDPLAVEAARENAELNGVEDRIEVSLS-------EDLVEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp SSCHHHHHHHHHHHHTT-TTCEEESCT-------SCTCCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred CCHHHHHHHHHHHHHcCCCeeEEEEEe-------cccccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 98876665543 2322 2211111 01112479999866655542 34566788997 9999998764
No 184
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.016 Score=52.42 Aligned_cols=82 Identities=22% Similarity=0.178 Sum_probs=52.8
Q ss_pred cCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc-CCC--eE--EeCCCCCchhH-HHHhh--CC
Q 016660 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT--EF--VNSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 198 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l-g~~--~v--v~~~~~~~~~~-i~~~~--~g 268 (385)
...++.++||.|+ |.+|..+++.+...|+ +|+.+.++++..+.+.+. .-. .+ .|..+...... +.+.. -+
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3457789999997 9999999999999999 799998877666544432 211 12 23333111111 11111 13
Q ss_pred CccEEEEccCCh
Q 016660 269 GADYCFECVGLA 280 (385)
Q Consensus 269 ~~d~vid~~g~~ 280 (385)
++|+||.+.|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 699999988754
No 185
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.43 E-value=0.009 Score=45.95 Aligned_cols=89 Identities=21% Similarity=0.258 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCCh
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 280 (385)
++.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +--.. ..++ + .... .++|+||-+.+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~-~~~~--~----~~~l-~~~~lV~~at~d~ 71 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQL-IRRE--F----EEDL-DGADLVFAATDDP 71 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEE-EESS-------GGGC-TTESEEEE-SS-H
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHH-Hhhh--H----HHHH-hhheEEEecCCCH
Confidence 57889999999999999999999999 888887664 2222 11111 1111 1 1111 2699999999998
Q ss_pred HHHHHHHHHhccCCceEEEeccCC
Q 016660 281 SLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 281 ~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
..-+......+.. +..+.....+
T Consensus 72 ~~n~~i~~~a~~~-~i~vn~~D~p 94 (103)
T PF13241_consen 72 ELNEAIYADARAR-GILVNVVDDP 94 (103)
T ss_dssp HHHHHHHHHHHHT-TSEEEETT-C
T ss_pred HHHHHHHHHHhhC-CEEEEECCCc
Confidence 8555666666665 8888887654
No 186
>PRK06182 short chain dehydrogenase; Validated
Probab=96.42 E-value=0.016 Score=52.94 Aligned_cols=78 Identities=18% Similarity=0.213 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe-EEeCCCCCchhH-HHHhh--CCCccEEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSI-IIDMT--DGGADYCFE 275 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~-vv~~~~~~~~~~-i~~~~--~g~~d~vid 275 (385)
++.+++|.|+ |++|...++.+...|+ +|+++++++++++.+...++.. ..|..+...... +.... .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999997 9999999999988999 8999988888776655555432 234444222221 22221 237999999
Q ss_pred ccCC
Q 016660 276 CVGL 279 (385)
Q Consensus 276 ~~g~ 279 (385)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9884
No 187
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.40 E-value=0.056 Score=47.51 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHHHHH----HcCC-CeEEeCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFEIGK----RFGV-TEFVNSKNC 256 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-------------------~~~~~~~----~lg~-~~vv~~~~~ 256 (385)
+...|+|+|.|++|-+++..+-..|+.++..+|-++ .|.+.++ +... .+|--.++.
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 567799999999999999999999998888886432 1111111 1221 123222221
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHH-HHHhccCCceEEEeccCC
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~ 304 (385)
-..+.+..+...+||+|+||.-+-.+--.+ ..|.+.+ -.++..+...
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence 222236666666999999999876533333 3355554 5666665543
No 188
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.40 E-value=0.02 Score=52.36 Aligned_cols=100 Identities=19% Similarity=0.300 Sum_probs=61.5
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCCe--EEeCCCCCchhHHHHhh
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSIIIDMT 266 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~--vv~~~~~~~~~~i~~~~ 266 (385)
+.+.+++++|++||-+|+|- |-+++.+|+..|+ +|++++.|++..+.++ +.|... -+...+ . +.+
T Consensus 54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~----~~~- 124 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--Y----RDL- 124 (273)
T ss_dssp HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G----GG--
T ss_pred HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--c----ccc-
Confidence 55778999999999999873 6677788888899 8999999999888765 355321 122222 1 222
Q ss_pred CCCccEEEEc-----cCC---hHHHHHHHHHhccCCceEEEecc
Q 016660 267 DGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 267 ~g~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.+.||.|+.. +|. +..++.+.+.|+++ |++++-..
T Consensus 125 ~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 125 PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 2278988653 332 24478899999997 99875443
No 189
>PRK08017 oxidoreductase; Provisional
Probab=96.40 E-value=0.018 Score=51.80 Aligned_cols=76 Identities=21% Similarity=0.274 Sum_probs=53.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE-EeCCCCCchhH----HHHhhCCCccEEEEc
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSI----IIDMTDGGADYCFEC 276 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-v~~~~~~~~~~----i~~~~~g~~d~vid~ 276 (385)
+++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+++.++..+ .|..+...... +.....+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999998 9999999999999999 89999999888887777776533 34433211111 222223468999988
Q ss_pred cCC
Q 016660 277 VGL 279 (385)
Q Consensus 277 ~g~ 279 (385)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
No 190
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.40 E-value=0.091 Score=47.69 Aligned_cols=104 Identities=15% Similarity=0.201 Sum_probs=62.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch-------------------HH----HHHHHcCCC-eEEeCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFGVT-EFVNSKNC 256 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~-------------------~~----~~~~~lg~~-~vv~~~~~ 256 (385)
.+.+|+|+|.|++|..++..+-..|+.+++.+|.+.- |. +.+.++... .|....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 5678999999999999999999999889998875421 11 112223322 23222221
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccCC
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
-..+.+..+....+|+||||......-..+.+......-.++..|..+
T Consensus 109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 111223344444799999999986544444444444314566665543
No 191
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.061 Score=47.71 Aligned_cols=78 Identities=19% Similarity=0.230 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCC---CeEE--eCCCCCchhH-HHHhhC--CCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFV--NSKNCGDKSI-IIDMTD--GGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~---~~vv--~~~~~~~~~~-i~~~~~--g~~ 270 (385)
++.++||+|+ |.+|...++.+...|+ +|+++++++++...+ +++.. -+++ |..+...... +..... +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999987 9999999988888899 799998887765533 33321 1222 3222111111 222211 368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998864
No 192
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.025 Score=50.46 Aligned_cols=75 Identities=21% Similarity=0.337 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCCeE-EeCCCCCchhHHHHhhC--CCccEEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEF-VNSKNCGDKSIIIDMTD--GGADYCFE 275 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~v-v~~~~~~~~~~i~~~~~--g~~d~vid 275 (385)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+...+ .|..+ ...+..... +++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAAAGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHHhCCCCEEEE
Confidence 4678999997 9999999999999999 7998988877665443 3444322 34333 222333332 36899999
Q ss_pred ccCC
Q 016660 276 CVGL 279 (385)
Q Consensus 276 ~~g~ 279 (385)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9874
No 193
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.36 E-value=0.046 Score=53.91 Aligned_cols=79 Identities=24% Similarity=0.334 Sum_probs=50.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch--H-HHHHHHcCCCe-EEeCCCCCchhHHHHhh---CCCcc
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--K-FEIGKRFGVTE-FVNSKNCGDKSIIIDMT---DGGAD 271 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~--~-~~~~~~lg~~~-vv~~~~~~~~~~i~~~~---~g~~d 271 (385)
.++.++||+|+ |++|...++.+...|+ +|+++++.+. . .+...+++... .+|..+......+.... .+++|
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 35789999987 9999999999999999 7888876432 2 22334455432 24544422222222211 23689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++|++.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999983
No 194
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.35 E-value=0.034 Score=53.70 Aligned_cols=91 Identities=22% Similarity=0.283 Sum_probs=59.7
Q ss_pred EEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHH--cCCC---eEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 205 VVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR--FGVT---EFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 205 VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~--lg~~---~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
|+|+|+|.+|..+++.+...+- .+|++.+++.++.+.+.+ .+.. ..+|..+ .+.+.++.. +.|+||+|+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~l~~~~~-~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND---PESLAELLR-GCDVVINCAG 76 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT---HHHHHHHHT-TSSEEEE-SS
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC---HHHHHHHHh-cCCEEEECCc
Confidence 7899999999999999887663 389999999999776653 2221 2234333 223555554 4699999999
Q ss_pred ChHHHHHHHHHhccCCceEEEe
Q 016660 279 LASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 279 ~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
.......+..|+..+ -.++..
T Consensus 77 p~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 77 PFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp GGGHHHHHHHHHHHT--EEEES
T ss_pred cchhHHHHHHHHHhC-CCeecc
Confidence 876566677777776 778774
No 195
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.33 E-value=0.086 Score=48.03 Aligned_cols=110 Identities=21% Similarity=0.270 Sum_probs=67.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-E----EeCCCCCchhHHHHh---h
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F----VNSKNCGDKSIIIDM---T 266 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v----v~~~~~~~~~~i~~~---~ 266 (385)
-.+..|+|.|| +++|...+.-+-..|+ +++.+.+..++++.. ++.+... + .|..+.+..+...+. .
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 36788999998 9999988888888898 666666667666554 4445433 2 233332222211111 2
Q ss_pred CCCccEEEEccCCh-------------------------HHHHHHHHHhccCC-ceEEEeccCCCCCccc
Q 016660 267 DGGADYCFECVGLA-------------------------SLVQEAYACCRKGW-GKTIVLGVDQPGSQLS 310 (385)
Q Consensus 267 ~g~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~ 310 (385)
-|++|+.++.+|-. ..-+.++..|++.+ |++|.++...+....+
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 24799999988752 11245666666644 8999888655433333
No 196
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.33 E-value=0.06 Score=47.89 Aligned_cols=108 Identities=23% Similarity=0.382 Sum_probs=74.4
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhhCC
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~~g 268 (385)
+....+..+|++||=+|+|. |-+++.+++..|-.+|+++|.+++-++.+++ .|... +..-. .... -..+.+.
T Consensus 43 ~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~-~dAe-~LPf~D~ 118 (238)
T COG2226 43 LISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV-GDAE-NLPFPDN 118 (238)
T ss_pred HHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE-echh-hCCCCCC
Confidence 33445566899999887765 8899999999985599999999998888765 23221 11111 0111 1223333
Q ss_pred CccEEEEccCC------hHHHHHHHHHhccCCceEEEeccCCC
Q 016660 269 GADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQP 305 (385)
Q Consensus 269 ~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~ 305 (385)
.||+|.-+.|- +.+++++.+.++++ |+++++....+
T Consensus 119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred ccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 79998776664 35689999999997 99998876543
No 197
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.32 E-value=0.046 Score=45.39 Aligned_cols=92 Identities=20% Similarity=0.257 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
.-.|.+++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +.. +.+. -...|++|-++|
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~~---------~~~a-~~~adi~vtaTG 87 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VMT---------LEEA-LRDADIFVTATG 87 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE----------HHHH-TTT-SEEEE-SS
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ecC---------HHHH-HhhCCEEEECCC
Confidence 4678999999999999999999999999 999999988776666655653 221 1111 125799999999
Q ss_pred ChHHH-HHHHHHhccCCceEEEeccC
Q 016660 279 LASLV-QEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 279 ~~~~~-~~~~~~l~~~~G~~v~~g~~ 303 (385)
....+ .+-++.|+++ ..+..+|..
T Consensus 88 ~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 88 NKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp SSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred CccccCHHHHHHhcCC-eEEeccCcC
Confidence 87643 5778889996 556566643
No 198
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.03 Score=50.43 Aligned_cols=74 Identities=18% Similarity=0.202 Sum_probs=50.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eE--EeCCCCCchhHHHHhhCCCccEE
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSIIIDMTDGGADYC 273 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--v~~~~~~~~~~i~~~~~g~~d~v 273 (385)
+.++||.|+ |.+|..+++.+...|+ +|+++.+++++.+.+. ..+.. .+ .|..+ ...+.....+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD---AIDRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC---HHHHHHHhcCCCCEE
Confidence 457999997 9999999999999999 8888888776554433 23322 11 23333 223444444589999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
|++.|.
T Consensus 78 i~~ag~ 83 (257)
T PRK09291 78 LNNAGI 83 (257)
T ss_pred EECCCc
Confidence 999873
No 199
>PRK06128 oxidoreductase; Provisional
Probab=96.32 E-value=0.074 Score=49.34 Aligned_cols=101 Identities=22% Similarity=0.142 Sum_probs=59.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch--H----HHHHHHcCCCeEE---eCCCCCchhH-HHHhh--C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--K----FEIGKRFGVTEFV---NSKNCGDKSI-IIDMT--D 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~--~----~~~~~~lg~~~vv---~~~~~~~~~~-i~~~~--~ 267 (385)
.+.++||.|+ |++|...+..+...|+ +|+.+.++.+ + .+.+++.|....+ |..+...... +.+.. -
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4678999987 9999999999888999 7777654432 1 2233344543222 3322111111 22221 1
Q ss_pred CCccEEEEccCCh--------------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 268 GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 268 g~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+++|++|+++|.. ..++.++..+.++ |+++.++..
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 3699999988741 1123445556675 898887653
No 200
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.31 E-value=0.017 Score=50.35 Aligned_cols=92 Identities=17% Similarity=0.046 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch-HH-HHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KF-EIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~-~~-~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
.+.+|||+|+|.+|...+..+...|+ +|++++.... .+ +++.. +.- ...... +.+. . -.++|+||-+++
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i-~~~~~~--~~~~--~--l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GKI-RWKQKE--FEPS--D--IVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE-EEEecC--CChh--h--cCCceEEEEcCC
Confidence 56789999999999999988888998 7888854321 11 22222 211 111111 1110 0 126899999999
Q ss_pred ChHHHHHHHHHhccCCceEEEeccC
Q 016660 279 LASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 279 ~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
.++ ++..+...+.. +.++.....
T Consensus 80 d~e-lN~~i~~~a~~-~~lvn~~d~ 102 (202)
T PRK06718 80 DPR-VNEQVKEDLPE-NALFNVITD 102 (202)
T ss_pred CHH-HHHHHHHHHHh-CCcEEECCC
Confidence 988 77666666664 667766543
No 201
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.03 Score=51.84 Aligned_cols=78 Identities=22% Similarity=0.286 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
.+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+. +.+.+ .+ .|..+...... +.... -+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999987 9999999998888899 8999988877655432 23332 12 23322111111 22111 236
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 202
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.033 Score=50.50 Aligned_cols=78 Identities=15% Similarity=0.100 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+.. .+ .|..+...... +.... -++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999987 9999999999988999 89999888776553322 2322 22 23333211111 11111 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 88 id~vi~~Ag~ 97 (263)
T PRK07814 88 LDIVVNNVGG 97 (263)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 203
>PRK09186 flagellin modification protein A; Provisional
Probab=96.24 E-value=0.08 Score=47.59 Aligned_cols=77 Identities=19% Similarity=0.271 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHc----CCCe----EEeCCCCCchhH-HHHhhC--
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVTE----FVNSKNCGDKSI-IIDMTD-- 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l----g~~~----vv~~~~~~~~~~-i~~~~~-- 267 (385)
++.++||.|+ |.+|...+..+...|+ +|+++.+++++.+.+ .++ +... ..|..+.+.... +.....
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4678999997 9999999999999999 788888877765433 222 2221 223333211111 222111
Q ss_pred CCccEEEEccC
Q 016660 268 GGADYCFECVG 278 (385)
Q Consensus 268 g~~d~vid~~g 278 (385)
+++|++|++.+
T Consensus 82 ~~id~vi~~A~ 92 (256)
T PRK09186 82 GKIDGAVNCAY 92 (256)
T ss_pred CCccEEEECCc
Confidence 35899999885
No 204
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.21 E-value=0.065 Score=46.02 Aligned_cols=96 Identities=17% Similarity=0.198 Sum_probs=61.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhh-CCCccEE
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMT-DGGADYC 273 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~-~g~~d~v 273 (385)
++++.+||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+.+ .....+. ..+. .+.||+|
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d~----~~~~~~~~fDlV 116 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGRA----EEFGQEEKFDVV 116 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEeccH----hhCCCCCCccEE
Confidence 45688999998755 5666666664433399999999887776653 454332 1111111 1111 2379999
Q ss_pred EEccCC--hHHHHHHHHHhccCCceEEEec
Q 016660 274 FECVGL--ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 274 id~~g~--~~~~~~~~~~l~~~~G~~v~~g 301 (385)
+-.... ...++.+.+.++++ |+++.+-
T Consensus 117 ~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 117 TSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 864322 35577899999997 9988773
No 205
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.20 E-value=0.028 Score=53.85 Aligned_cols=96 Identities=17% Similarity=0.208 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~-~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
-.+.++||+|+|-+|.+++..+...|++.|+++.++.+|.+ +++++|+. ++..++ +..... .+|+||.+++
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e------l~~~l~-~~DvVissTs 247 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE------LLEALA-EADVVISSTS 247 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH------HHHhhh-hCCEEEEecC
Confidence 47889999999999999999999999889999999988866 57788843 333333 222221 5899999998
Q ss_pred ChHHH---HHHHHHhccCCc-eEEEeccC
Q 016660 279 LASLV---QEAYACCRKGWG-KTIVLGVD 303 (385)
Q Consensus 279 ~~~~~---~~~~~~l~~~~G-~~v~~g~~ 303 (385)
.++.+ ......++.... -++.++..
T Consensus 248 a~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 248 APHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred CCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 87532 344455555312 35566653
No 206
>PRK04148 hypothetical protein; Provisional
Probab=96.20 E-value=0.11 Score=41.75 Aligned_cols=88 Identities=18% Similarity=0.203 Sum_probs=61.3
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
..++.+++++|.| .|...++.+...|. .|+++|.+++..+.+++.+...+.+-- +.+.... -+++|++..+-.
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDl---f~p~~~~--y~~a~liysirp 86 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDL---FNPNLEI--YKNAKLIYSIRP 86 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcC---CCCCHHH--HhcCCEEEEeCC
Confidence 3456789999998 78755556667898 999999999999999988875443211 1111111 126999999999
Q ss_pred ChHHHHHHHHHhccC
Q 016660 279 LASLVQEAYACCRKG 293 (385)
Q Consensus 279 ~~~~~~~~~~~l~~~ 293 (385)
.++....+++..++-
T Consensus 87 p~el~~~~~~la~~~ 101 (134)
T PRK04148 87 PRDLQPFILELAKKI 101 (134)
T ss_pred CHHHHHHHHHHHHHc
Confidence 998555555555553
No 207
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.20 E-value=0.05 Score=50.07 Aligned_cols=72 Identities=19% Similarity=0.167 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcC----CCeEEeCCCCCchhHHHHhhCCCccEEE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG----VTEFVNSKNCGDKSIIIDMTDGGADYCF 274 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg----~~~vv~~~~~~~~~~i~~~~~g~~d~vi 274 (385)
..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+. .++ ...+....+ +.... ..+|+||
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~------~~~~~-~~aDiVI 197 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD------LAAAL-AAADGLV 197 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc------hHhhh-CCCCEEE
Confidence 35678999999999999999999999989999999988876543 332 112222211 11111 2589999
Q ss_pred EccC
Q 016660 275 ECVG 278 (385)
Q Consensus 275 d~~g 278 (385)
+|+.
T Consensus 198 naTp 201 (284)
T PRK12549 198 HATP 201 (284)
T ss_pred ECCc
Confidence 9964
No 208
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.20 E-value=0.068 Score=46.58 Aligned_cols=99 Identities=19% Similarity=0.174 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHH----HHHHcCCC-eEEeCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFE----IGKRFGVT-EFVNSKNC 256 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-------------------~~~~----~~~~lg~~-~vv~~~~~ 256 (385)
.+.+|+|+|+|++|..+++.+...|+.+++.+|.+. .|.+ .++++... .+-.....
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 457799999999999999999999998999998652 1222 22233322 12111111
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCce-EEEec
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK-TIVLG 301 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~-~v~~g 301 (385)
-....+.++. .++|+||+|..+.......-+...+. +. ++..+
T Consensus 100 i~~~~~~~~~-~~~D~Vi~~~d~~~~r~~l~~~~~~~-~ip~i~~~ 143 (202)
T TIGR02356 100 VTAENLELLI-NNVDLVLDCTDNFATRYLINDACVAL-GTPLISAA 143 (202)
T ss_pred CCHHHHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence 1112233333 26999999998877544444444443 43 44444
No 209
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.035 Score=50.43 Aligned_cols=78 Identities=19% Similarity=0.252 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-Hc----CCC-eE--EeCCCCCchhH-HHHhh-CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVT-EF--VNSKNCGDKSI-IIDMT-DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~l----g~~-~v--v~~~~~~~~~~-i~~~~-~g~ 269 (385)
++.++||.|+ +++|...++.+...|+ +|+.+++++++.+.+. ++ +.. .. .|..+...... +.... -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4778999987 9999999999999999 8999888877655432 22 322 12 23333211111 22221 146
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|+++++.|.
T Consensus 86 iD~lv~nag~ 95 (263)
T PRK08339 86 PDIFFFSTGG 95 (263)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 210
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.18 E-value=0.037 Score=50.10 Aligned_cols=77 Identities=18% Similarity=0.194 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc-CCC-eE--EeCCCCCchhH-HHHhhC--CCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EF--VNSKNCGDKSI-IIDMTD--GGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l-g~~-~v--v~~~~~~~~~~-i~~~~~--g~~d~ 272 (385)
++.++||.|+ |++|...++.+...|+ +|++++++.++.+.+.+. +.. .. .|..+...... +.+... +.+|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 4688999987 9999999999999999 899888887766655443 322 11 23333111111 222222 36899
Q ss_pred EEEccC
Q 016660 273 CFECVG 278 (385)
Q Consensus 273 vid~~g 278 (385)
+|++.|
T Consensus 83 li~~Ag 88 (262)
T TIGR03325 83 LIPNAG 88 (262)
T ss_pred EEECCC
Confidence 999987
No 211
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.065 Score=47.43 Aligned_cols=78 Identities=18% Similarity=0.103 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHHcCCCeE-EeCCCCCchhH-HHHhh--CCCcc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTEF-VNSKNCGDKSI-IIDMT--DGGAD 271 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~----~~~lg~~~v-v~~~~~~~~~~-i~~~~--~g~~d 271 (385)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++... ++..+...+ .|..+...... +.... -+++|
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 4678999997 9999999999988899 79999887665332 222333221 23333111111 11111 13689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
+||++.|.
T Consensus 85 ~vi~~ag~ 92 (239)
T PRK12828 85 ALVNIAGA 92 (239)
T ss_pred EEEECCcc
Confidence 99998874
No 212
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.038 Score=48.79 Aligned_cols=76 Identities=12% Similarity=0.136 Sum_probs=50.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeE--EeCCCCCchhHHHHhhC-CCccEEEEccC
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF--VNSKNCGDKSIIIDMTD-GGADYCFECVG 278 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v--v~~~~~~~~~~i~~~~~-g~~d~vid~~g 278 (385)
.+++|.|+ |++|...++.+...|+ +|+++++++++.+.+++++...+ .|..+......+.+... +++|++|.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 46899987 9999998888888899 89999888877665555543222 33333212222333333 37999999886
Q ss_pred C
Q 016660 279 L 279 (385)
Q Consensus 279 ~ 279 (385)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 4
No 213
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.039 Score=51.09 Aligned_cols=78 Identities=21% Similarity=0.267 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCC--Ce-E--EeCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV--TE-F--VNSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~--~~-v--v~~~~~~~~~~-i~~~~--~g~~ 270 (385)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++++. .. . .|..+...... +.+.. .+.+
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999987 9999999999999999 899898888776543 44542 11 1 34333211111 22221 1469
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|+++|.
T Consensus 87 d~vI~nAG~ 95 (296)
T PRK05872 87 DVVVANAGI 95 (296)
T ss_pred CEEEECCCc
Confidence 999999985
No 214
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.12 E-value=0.045 Score=48.98 Aligned_cols=78 Identities=21% Similarity=0.178 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcC--CC-eEE--eCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--VT-EFV--NSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg--~~-~vv--~~~~~~~~~~-i~~~~--~g~~ 270 (385)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+. .. ..+ |..+...... +.... .+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4568999997 9999999999888899 7999999887665432 222 21 122 2222111111 11111 1368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999875
No 215
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.042 Score=49.44 Aligned_cols=78 Identities=21% Similarity=0.231 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe--E--EeCCCCCchhH-HHHhhC--CCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--F--VNSKNCGDKSI-IIDMTD--GGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~--v--v~~~~~~~~~~-i~~~~~--g~~d~ 272 (385)
++.++||.|+ |.+|...++.+...|+ +|+.+.++++..+...++.... . .|..+...... +..... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999997 9999999998888999 7999988877655555443221 2 23322111111 111111 36899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999974
No 216
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.10 E-value=0.052 Score=48.58 Aligned_cols=78 Identities=17% Similarity=0.239 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHHcCCC-eE--EeCCCCCchhH-HHHhhC--CCcc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVT-EF--VNSKNCGDKSI-IIDMTD--GGAD 271 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~--~~~~~~~lg~~-~v--v~~~~~~~~~~-i~~~~~--g~~d 271 (385)
.+.++||.|+ |++|...++.+...|+ +|+.+++++. ..+.+++++.. .+ .|..+...... +.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4788999997 9999999999988999 8888877642 12333444532 12 23333111111 222221 3699
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998874
No 217
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.10 E-value=0.08 Score=46.58 Aligned_cols=100 Identities=16% Similarity=0.231 Sum_probs=66.4
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----HcCCCeE--EeCCCCCchhHHHHh
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSIIIDM 265 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg~~~v--v~~~~~~~~~~i~~~ 265 (385)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ ++|.+.+ +..+. .. .+
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~---~~---~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG---TQ---GW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc---cc---CC
Confidence 44556788999999998866 6777788887653 26999999988777655 3454322 21111 00 11
Q ss_pred h-CCCccEEEEccCChHHHHHHHHHhccCCceEEEe
Q 016660 266 T-DGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 266 ~-~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
. .+.||+|+-........+...+.|+++ |+++..
T Consensus 142 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1 236999875554555467888999997 998764
No 218
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.09 E-value=0.07 Score=44.45 Aligned_cols=89 Identities=18% Similarity=0.083 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCCh
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 280 (385)
.|.+|||+|+|.+|.--++.+...|+ .|++++ ++..+.+.+++.-. +..+. +.+. .-.++|+||-+++..
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~--~~~~----dl~~a~lViaaT~d~ 81 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT--FSND----DIKDAHLIYAATNQH 81 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc--cChh----cCCCceEEEECCCCH
Confidence 57889999999999998888888999 787774 44434444454211 22211 1110 012689999999988
Q ss_pred HHHHHHHHHhccCCceEEEec
Q 016660 281 SLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 281 ~~~~~~~~~l~~~~G~~v~~g 301 (385)
+ ++..+...++. ...+...
T Consensus 82 e-~N~~i~~~a~~-~~~vn~~ 100 (157)
T PRK06719 82 A-VNMMVKQAAHD-FQWVNVV 100 (157)
T ss_pred H-HHHHHHHHHHH-CCcEEEC
Confidence 8 77777766664 4455544
No 219
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.051 Score=49.21 Aligned_cols=80 Identities=24% Similarity=0.322 Sum_probs=51.7
Q ss_pred CCCCCEEEEEcC-C-HHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-----cCCCeE----EeCCCCCchhHHHH-hh
Q 016660 199 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF----VNSKNCGDKSIIID-MT 266 (385)
Q Consensus 199 ~~~~~~VlI~G~-g-~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-----lg~~~v----v~~~~~~~~~~i~~-~~ 266 (385)
+.++.++||+|+ | ++|...++.+...|+ +|+++++++++.+...+ ++...+ .|..+......+.+ ..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 445789999986 6 799999999999999 78888887766554322 453322 23333211111221 11
Q ss_pred --CCCccEEEEccCC
Q 016660 267 --DGGADYCFECVGL 279 (385)
Q Consensus 267 --~g~~d~vid~~g~ 279 (385)
.+.+|++|+++|.
T Consensus 93 ~~~g~id~li~~ag~ 107 (262)
T PRK07831 93 ERLGRLDVLVNNAGL 107 (262)
T ss_pred HHcCCCCEEEECCCC
Confidence 1468999999984
No 220
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.044 Score=49.37 Aligned_cols=79 Identities=15% Similarity=0.208 Sum_probs=50.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCC-eEE--eCCCCCchhH-HHHhh--CC
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~-~vv--~~~~~~~~~~-i~~~~--~g 268 (385)
.++.++||.|+ |.+|..++..+...|+ +|+++.+++++.+.+.+ .+.. .++ |..+...... +.+.. .+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 45789999987 9999999999999999 89999888877654332 1221 222 3322111111 11111 23
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
.+|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 221
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.07 E-value=0.052 Score=48.60 Aligned_cols=78 Identities=23% Similarity=0.271 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-E--EeCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--v~~~~~~~~~~-i~~~~~--g~ 269 (385)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... . .|..+...... +..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4778999997 9999999999998999 789898887665433 2234431 2 23222111111 222222 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 8999999873
No 222
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.051 Score=48.63 Aligned_cols=78 Identities=22% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcCCCe-E--EeCCCCCchhH-HHHhh--CCCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-F--VNSKNCGDKSI-IIDMT--DGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~~~-v--v~~~~~~~~~~-i~~~~--~g~~d~ 272 (385)
++.++||.|+ |.+|...++.+...|+ +|+++++++++.+. .++++... . .|..+...... +.... .+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999997 9999999999999999 89999887765543 34455432 2 23222111111 11111 236899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|+++|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9999874
No 223
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.06 E-value=0.11 Score=46.76 Aligned_cols=78 Identities=22% Similarity=0.242 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eEE--eCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~vv--~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.+|||.|+ |.+|...++.+...|+ +|+++++++++.+... +.+.. +++ |..+...... +.... .++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999987 9999999998888899 8888888877654332 22332 122 3322111111 11111 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+++.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 224
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.047 Score=49.26 Aligned_cols=80 Identities=20% Similarity=0.192 Sum_probs=50.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH----HHHHcCCCe---EEeCCCCCchhHHHHhh---CC
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTE---FVNSKNCGDKSIIIDMT---DG 268 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~----~~~~lg~~~---vv~~~~~~~~~~i~~~~---~g 268 (385)
.++.+++|.|+ |++|...++.+...|++.|+++++++++.+ .+++.+... .+|..+......+.+.. -+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35678999997 999999999999999954888888766544 223344432 12333321111111111 13
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 225
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.05 E-value=0.023 Score=56.34 Aligned_cols=78 Identities=26% Similarity=0.312 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc---------------------hHHHHHHHcCCCeEEeCCCCCch
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGDK 259 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~---------------------~~~~~~~~lg~~~vv~~~~~~~~ 259 (385)
.+.+|+|+|+|+.|+.++..++..|+ .|++++..+ ...++++++|++..++..-....
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 67899999999999999999999999 788887653 24567788998755544221110
Q ss_pred hHHHHhhCCCccEEEEccCChH
Q 016660 260 SIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 260 ~~i~~~~~g~~d~vid~~g~~~ 281 (385)
.+..+. .++|.||.++|...
T Consensus 219 -~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 219 -SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred -CHHHHH-hcCCEEEEEeCCCC
Confidence 122222 26999999999754
No 226
>PRK06484 short chain dehydrogenase; Validated
Probab=96.05 E-value=0.1 Score=52.40 Aligned_cols=102 Identities=23% Similarity=0.230 Sum_probs=65.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCCe---EEeCCCCCchhH-HHHhhC--CCcc
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTE---FVNSKNCGDKSI-IIDMTD--GGAD 271 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~---vv~~~~~~~~~~-i~~~~~--g~~d 271 (385)
..+.++||.|+ +++|...++.+...|+ +|+.+++++++.+.+. +++... ..|..+...... +..... +.+|
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 45788999987 9999999999999999 8999988877766544 345432 123333211111 222221 3689
Q ss_pred EEEEccCCh--------------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 272 YCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 272 ~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
++|+++|.. ...+.++..++.+ |+++.++..
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 999988742 0123345566665 899988754
No 227
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.096 Score=47.29 Aligned_cols=76 Identities=20% Similarity=0.208 Sum_probs=50.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cC-CC-e--EEeCCCCCchhH-HHHhh---CCCccE
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-VT-E--FVNSKNCGDKSI-IIDMT---DGGADY 272 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg-~~-~--vv~~~~~~~~~~-i~~~~---~g~~d~ 272 (385)
.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++ .. + .+|..+...... +.... .+.+|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 46899987 9999999998888999 89998888877665433 32 11 1 234443221111 22211 347899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|.++|.
T Consensus 81 vi~~ag~ 87 (260)
T PRK08267 81 LFNNAGI 87 (260)
T ss_pred EEECCCC
Confidence 9999985
No 228
>PRK06194 hypothetical protein; Provisional
Probab=96.04 E-value=0.049 Score=50.00 Aligned_cols=78 Identities=21% Similarity=0.337 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHc---CCCeEEeCCCCCchhHHHHhh------CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSIIIDMT------DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l---g~~~vv~~~~~~~~~~i~~~~------~g~ 269 (385)
++.++||+|+ |++|...++.+...|+ +|++++++.++.+.. .++ +....+-.-+......+.+.. .++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999998888999 898888876654432 222 332111111212222222221 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 229
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.05 Score=48.94 Aligned_cols=78 Identities=21% Similarity=0.170 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-H---cCCCe---EEeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVTE---FVNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~---lg~~~---vv~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+.++++.++.+.+. + .+.+. ..|..+...... +.... -+.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4788999997 9999999999999999 8998888877655432 2 23221 123333111111 22211 147
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|++.|.
T Consensus 87 id~lv~~ag~ 96 (253)
T PRK05867 87 IDIAVCNAGI 96 (253)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 230
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.02 E-value=0.055 Score=48.82 Aligned_cols=78 Identities=18% Similarity=0.189 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCeEEeCCCCCchhHHHHhh------CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSIIIDMT------DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~vv~~~~~~~~~~i~~~~------~g~ 269 (385)
++.++||.|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+....+-.-+......+.+.. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999997 9999999999999999 788888887654432 334543222112212222222211 135
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999875
No 231
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.051 Score=49.00 Aligned_cols=78 Identities=23% Similarity=0.236 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCCe-EEeCCCCCchhH-HHHhh--CCCccEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE-FVNSKNCGDKSI-IIDMT--DGGADYCF 274 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~-vv~~~~~~~~~~-i~~~~--~g~~d~vi 274 (385)
++.+|||+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++... ..|..+...... +.... .+++|++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5789999997 9999999999999999 888888877765443 4454422 234444222111 22211 13689999
Q ss_pred EccCC
Q 016660 275 ECVGL 279 (385)
Q Consensus 275 d~~g~ 279 (385)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06057 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 98874
No 232
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.99 E-value=0.052 Score=50.63 Aligned_cols=91 Identities=24% Similarity=0.395 Sum_probs=61.5
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 203 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 203 ~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
.+|.|+|+|.+|...+..++..|. ..|++.++++++.+.+++.|....+. .+ . .+.. ...|+||.|++...
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-~~--~----~~~~-~~aDvViiavp~~~ 78 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-TS--A----AEAV-KGADLVILCVPVGA 78 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-CC--H----HHHh-cCCCEEEECCCHHH
Confidence 579999999999999998888884 37999999998888888887532111 11 1 1111 25899999998754
Q ss_pred H---HHHHHHHhccCCceEEEecc
Q 016660 282 L---VQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 282 ~---~~~~~~~l~~~~G~~v~~g~ 302 (385)
. ++.....++++ ..++.+|.
T Consensus 79 ~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 79 SGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHhhCCCC-CEEEeCcc
Confidence 2 23333455664 55655554
No 233
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.97 E-value=0.1 Score=49.11 Aligned_cols=94 Identities=16% Similarity=0.092 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHH-HHcCCCEEEEEcCCchHHHHHH-H----cCCCeEEeCCCCCchhHHHHhhCCCccEE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDVISEKFEIGK-R----FGVTEFVNSKNCGDKSIIIDMTDGGADYC 273 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la-~~~G~~~vi~~~~~~~~~~~~~-~----lg~~~vv~~~~~~~~~~i~~~~~g~~d~v 273 (385)
....+++|+|+|..|.+.+..+ ...++++|.+.++++++.+.+. + ++.. +..+.+ .. +.. ...|+|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~--~~----~~~-~~aDiV 196 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS--AD----EAI-EEADII 196 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC--HH----HHH-hcCCEE
Confidence 4567899999999998877554 4678889999999988866433 2 3433 222222 11 111 258999
Q ss_pred EEccCChHHHHHHHHHhccCCceEEEeccCC
Q 016660 274 FECVGLASLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 274 id~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
+.|+++.+.+- . ..+++| -.++.+|...
T Consensus 197 i~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 197 VTVTNAKTPVF-S-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence 99999886333 3 888996 8888898754
No 234
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.97 E-value=0.08 Score=48.55 Aligned_cols=139 Identities=22% Similarity=0.297 Sum_probs=79.2
Q ss_pred ceeeeEeeccCceEECCCCCCcccccccccchhhhhhhhhh-hccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEc
Q 016660 155 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 233 (385)
Q Consensus 155 ~~~~~v~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~ 233 (385)
+|.+|..-....++++.+++.+. ......|++. +.- ...++++.+||=+|+|+ |.++|..+| +|+++|+++|
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~D 192 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVD 192 (300)
T ss_pred CCccCCCCCCceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEec
Confidence 45554332235667777776442 2233334432 221 22366999999999865 776665554 5777999999
Q ss_pred CCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCCh---HHHHHHHHHhccCCceEEEeccCC
Q 016660 234 VISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 234 ~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
.++--.+.+++ -++.... ... .+.. .....++.||+|+-.+=.. ....+....++++ |++++.|...
T Consensus 193 iDp~AV~aa~eNa~~N~v~~~~-~~~-~~~~-~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 193 IDPQAVEAARENARLNGVELLV-QAK-GFLL-LEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred CCHHHHHHHHHHHHHcCCchhh-hcc-cccc-hhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 88765554443 2333210 000 0111 1122224799998655222 3356788899997 9999998753
No 235
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.97 E-value=0.16 Score=45.12 Aligned_cols=102 Identities=20% Similarity=0.184 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHH----HHHHcCCC-eEEeCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFE----IGKRFGVT-EFVNSKNC 256 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-------------------~~~~----~~~~lg~~-~vv~~~~~ 256 (385)
.+.+|+|+|.|++|..++..+-..|..+++.+|.+. .|.+ .++++... .+....+.
T Consensus 10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~ 89 (231)
T cd00755 10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEF 89 (231)
T ss_pred hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeee
Confidence 346799999999999999999999999999987543 1111 12223322 22212221
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEecc
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
-..+....+....+|+|+||..+...-..+.+.....+-.++..+.
T Consensus 90 i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~g 135 (231)
T cd00755 90 LTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSMG 135 (231)
T ss_pred cCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEeC
Confidence 1112234444446999999999877544444444443134555443
No 236
>PRK08264 short chain dehydrogenase; Validated
Probab=95.95 E-value=0.043 Score=48.76 Aligned_cols=73 Identities=16% Similarity=0.225 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eEE--eCCCCCchhHHHHhhCC--CccEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFV--NSKNCGDKSIIIDMTDG--GADYCF 274 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vv--~~~~~~~~~~i~~~~~g--~~d~vi 274 (385)
.+.++||+|+ |.+|...++.+...|+++|++++++.++.+. .+.. .++ |..+ ...+.+.... .+|+||
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAASDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhcCCCCEEE
Confidence 4678999987 9999999999998998678888887766543 3322 222 3222 2223333333 589999
Q ss_pred EccCC
Q 016660 275 ECVGL 279 (385)
Q Consensus 275 d~~g~ 279 (385)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99986
No 237
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.94 E-value=0.036 Score=50.99 Aligned_cols=77 Identities=14% Similarity=0.044 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCC-eEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~-~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
++.+++|+|+|++|.+++..+...|+++|+++.++.+|.+.+. .++.. .+.... ....+... -..+|+||+|++
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~~~~-~~~~DiVInaTp 199 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGGLAI-EKAAEVLVSTVP 199 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhhhhc-ccCCCEEEECCC
Confidence 5788999999999999999999999989999999988776543 34321 111111 00001111 125899999987
Q ss_pred ChH
Q 016660 279 LAS 281 (385)
Q Consensus 279 ~~~ 281 (385)
...
T Consensus 200 ~g~ 202 (282)
T TIGR01809 200 ADV 202 (282)
T ss_pred CCC
Confidence 643
No 238
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.93 E-value=0.069 Score=48.83 Aligned_cols=94 Identities=19% Similarity=0.244 Sum_probs=64.6
Q ss_pred ccccchhhhhhhhhhhcc-CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCc
Q 016660 181 LLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~~-~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~ 258 (385)
.+||.....+. +.+..+ --.|.+|+|+|.|. +|.-+++++...|+ +|+++.+....
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~-------------------- 194 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKD-------------------- 194 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchh--------------------
Confidence 45665444443 334433 34789999999855 99999999999999 88888643211
Q ss_pred hhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccC
Q 016660 259 KSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 259 ~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+.+.+. .+|+||.++|.+..+.. +.++++ ..++.+|..
T Consensus 195 ---l~~~~~-~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 195 ---MASYLK-DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred ---HHHHHh-hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 111111 48999999999875654 457886 778888864
No 239
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.057 Score=49.40 Aligned_cols=77 Identities=18% Similarity=0.194 Sum_probs=50.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-e-E--EeCCCCCchhH-HHHhhC--CCccEE
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-E-F--VNSKNCGDKSI-IIDMTD--GGADYC 273 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~-v--v~~~~~~~~~~-i~~~~~--g~~d~v 273 (385)
+.++||.|+ |++|...++.+...|+ +|+++++++++.+.+.+.... . . .|..+...... +..... +++|++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 567999987 9999999999888999 899999888877655543221 1 1 23333111111 121111 368999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
|++.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999886
No 240
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.2 Score=44.53 Aligned_cols=101 Identities=18% Similarity=0.136 Sum_probs=58.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch-HHH----HHHHcCCC-eEE--eCCCCCchhH-HHHhh--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVT-EFV--NSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~-~~~----~~~~lg~~-~vv--~~~~~~~~~~-i~~~~--~g 268 (385)
++.++||+|+ |++|...++.+...|+ +++.+.++.+ +.+ .+++.+.. ..+ |..+...... +.+.. -+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999999999999 6666544332 222 22333432 222 2222111111 12111 13
Q ss_pred CccEEEEccCCh-------------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 269 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 269 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
++|++|.++|.. ..++.+++.++.+ |+++.++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 689999988841 1123444555665 888888753
No 241
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.89 E-value=0.1 Score=46.26 Aligned_cols=92 Identities=23% Similarity=0.218 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCC--EEEEEcCC----chH--------HHHHHHcCCCeEEeCCCCCchhHHHHh
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSIIIDM 265 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~--~vi~~~~~----~~~--------~~~~~~lg~~~vv~~~~~~~~~~i~~~ 265 (385)
-++.+|+|+|+|+.|..++..+...|++ +++.++++ .+| .++++.++... .+ .+ +.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~----l~~~ 94 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GT----LKEA 94 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CC----HHHH
Confidence 4678999999999999999999999997 89999988 443 33445443211 11 01 1111
Q ss_pred hCCCccEEEEccCChHHHHHHHHHhccCCceEEEec
Q 016660 266 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 266 ~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
.. ++|++|.+++....-.+.++.+.++ ..++.+.
T Consensus 95 l~-~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 95 LK-GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred Hh-cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 12 4899999997433224667777775 5555444
No 242
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.88 E-value=0.028 Score=51.40 Aligned_cols=75 Identities=28% Similarity=0.303 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCe-EEeCCCCCchhHHHHhhCC-CccEEEEc
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSIIIDMTDG-GADYCFEC 276 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~-vv~~~~~~~~~~i~~~~~g-~~d~vid~ 276 (385)
.++.+++|+|+|+.+.+++.-++..|+++|+++.++.+|.+.+.+ ++... .+.... ...+... .+|++|++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~------~~~~~~~~~~dliINa 197 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA------LADLEGLEEADLLINA 197 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc------ccccccccccCEEEEC
Confidence 357999999999999999999999998899999999998776654 33211 011111 0011111 48999998
Q ss_pred cCCh
Q 016660 277 VGLA 280 (385)
Q Consensus 277 ~g~~ 280 (385)
++..
T Consensus 198 Tp~G 201 (283)
T COG0169 198 TPVG 201 (283)
T ss_pred CCCC
Confidence 8754
No 243
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.88 E-value=0.13 Score=48.03 Aligned_cols=95 Identities=11% Similarity=0.084 Sum_probs=60.9
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE-eCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv-~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
+|||+|+ |-+|...+..+...|+ +|+++.++.++...+...+++.+. |..+ ...+..... ++|+||++++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~~~l~~al~-g~d~Vi~~~~~~~ 76 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---PETLPPSFK-GVTAIIDASTSRP 76 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---HHHHHHHHC-CCCEEEECCCCCC
Confidence 6999997 9999999999988999 899888887766555555654332 2222 222333333 5899999876421
Q ss_pred ------------HHHHHHHHhccC-CceEEEeccC
Q 016660 282 ------------LVQEAYACCRKG-WGKTIVLGVD 303 (385)
Q Consensus 282 ------------~~~~~~~~l~~~-~G~~v~~g~~ 303 (385)
....+++.++.. -.+++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 77 SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 112344444443 1378887764
No 244
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.86 E-value=0.097 Score=45.88 Aligned_cols=104 Identities=18% Similarity=0.222 Sum_probs=69.7
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHH----cCCCe-EEeCCCCCchhHHHHhhCCC
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTE-FVNSKNCGDKSIIIDMTDGG 269 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~----lg~~~-vv~~~~~~~~~~i~~~~~g~ 269 (385)
.++.....+||=+|.+ +|..++++|..+. -.+++.++.++++.+.+++ .|... +.-....+..+.+.+...+.
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~ 132 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGS 132 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCC
Confidence 4556678888888863 3777888888775 2389999999999887764 67654 22111112333333333458
Q ss_pred ccEEE-EccC--ChHHHHHHHHHhccCCceEEEec
Q 016660 270 ADYCF-ECVG--LASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 270 ~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
||+|| |+.- .+..++.+++++++| |.++.=.
T Consensus 133 fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 133 FDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred ccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 99995 5543 356689999999997 8777543
No 245
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.82 E-value=0.076 Score=47.20 Aligned_cols=78 Identities=22% Similarity=0.195 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCeE---EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF---VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~v---v~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.+|||+|+ |.+|...++.+...|+ +|+++.+++++.+.. ++.+.... .|..+...... +.... -+.
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3568999997 9999999999988999 699998887764432 33443322 23333211111 22211 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.++|.
T Consensus 83 id~vi~~ag~ 92 (246)
T PRK05653 83 LDILVNNAGI 92 (246)
T ss_pred CCEEEECCCc
Confidence 8999999865
No 246
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.82 E-value=0.067 Score=48.43 Aligned_cols=78 Identities=23% Similarity=0.254 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCC-eE--EeCCCCCchhH-HHHhh--CCCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSI-IIDMT--DGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~-~v--v~~~~~~~~~~-i~~~~--~g~~d~ 272 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+.+ ++.. .. .|..+...... +.... .+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4678999987 9999999999999999 79988888877665543 3322 12 23333111111 22221 236899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|+++|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9999873
No 247
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.072 Score=48.18 Aligned_cols=76 Identities=21% Similarity=0.258 Sum_probs=47.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCeEEeCCCCCchhHHH----HhhC--CCcc
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSIII----DMTD--GGAD 271 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~vv~~~~~~~~~~i~----~~~~--g~~d 271 (385)
.++||.|+ |.+|..+++.+...|+ +|+++++++++.+.+ +..+....+..-+......+. .... +++|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999987 9999999999989999 899998887654432 223432211111211222222 2111 3689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
+||.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 248
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.1 Score=45.86 Aligned_cols=74 Identities=16% Similarity=0.120 Sum_probs=47.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCeEEeCCCCCchhHHHHhhCC--CccEEEEccC
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSIIIDMTDG--GADYCFECVG 278 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vv~~~~~~~~~~i~~~~~g--~~d~vid~~g 278 (385)
.++||.|+ |.+|...+..+... + +|++++++.++.+.+.+ +...+++.. +......+.+.... +.|++|.++|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPV-DLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEec-CCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 57999987 99999888877666 6 79999888776554442 211222221 21223334444443 6999999987
Q ss_pred C
Q 016660 279 L 279 (385)
Q Consensus 279 ~ 279 (385)
.
T Consensus 81 ~ 81 (227)
T PRK08219 81 V 81 (227)
T ss_pred c
Confidence 5
No 249
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.075 Score=47.99 Aligned_cols=78 Identities=18% Similarity=0.209 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-Hc-----CCC-eE--EeCCCCCchhH-HHHhh--C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EF--VNSKNCGDKSI-IIDMT--D 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~l-----g~~-~v--v~~~~~~~~~~-i~~~~--~ 267 (385)
.+.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+. ++ +.. .+ .|..+...... +.... -
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4678999987 9999999999989999 7888888776655332 22 222 12 23322111111 21111 1
Q ss_pred CCccEEEEccCC
Q 016660 268 GGADYCFECVGL 279 (385)
Q Consensus 268 g~~d~vid~~g~ 279 (385)
+.+|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (260)
T PRK07063 85 GPLDVLVNNAGI 96 (260)
T ss_pred CCCcEEEECCCc
Confidence 369999999884
No 250
>PRK06196 oxidoreductase; Provisional
Probab=95.81 E-value=0.051 Score=50.80 Aligned_cols=78 Identities=15% Similarity=0.174 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCCeE--EeCCCCCchhH-HHHhhC--CCccEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF--VNSKNCGDKSI-IIDMTD--GGADYC 273 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~v--v~~~~~~~~~~-i~~~~~--g~~d~v 273 (385)
.+.+|||.|+ |++|..++..+...|+ +|+++++++++.+.+ .++..-.+ .|..+...... +..... +++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4678999997 9999999998888999 888888887765533 22321122 23333111111 222222 479999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
|+++|.
T Consensus 104 i~nAg~ 109 (315)
T PRK06196 104 INNAGV 109 (315)
T ss_pred EECCCC
Confidence 999873
No 251
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.075 Score=47.81 Aligned_cols=78 Identities=19% Similarity=0.210 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCCe-EE--eCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~-vv--~~~~~~~~~~-i~~~~~--g~ 269 (385)
++.++||.|+ |++|...+..+...|+ +|+.+++++++.+.+. +.+.+. .+ |..+...... +.+... +.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999987 9999999999888999 7888888877655332 234322 22 3322111111 222211 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.++|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 252
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.79 E-value=0.035 Score=57.33 Aligned_cols=77 Identities=26% Similarity=0.283 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch---------------------HHHHHHHcCCCeEEeCCCCCch
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 259 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~---------------------~~~~~~~lg~~~vv~~~~~~~~ 259 (385)
.+++|+|+|+|+.|+.+++.++..|+ +|++++..+. +.++++++|++..++..-...
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~- 386 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRD- 386 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCc-
Confidence 48999999999999999999999999 7888876652 456778889876555432111
Q ss_pred hHHHHhhCCCccEEEEccCCh
Q 016660 260 SIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 260 ~~i~~~~~g~~d~vid~~g~~ 280 (385)
..+..+. .++|.||.++|..
T Consensus 387 ~~~~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 387 ITFSDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CCHHHHH-hcCCEEEEeCCCC
Confidence 1122222 2699999999874
No 253
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.78 E-value=0.042 Score=47.65 Aligned_cols=97 Identities=18% Similarity=0.275 Sum_probs=61.1
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc----CCCeEEeCCCCCchhHHHHh-hCCCc
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSIIIDM-TDGGA 270 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l----g~~~vv~~~~~~~~~~i~~~-~~g~~ 270 (385)
.....++.+||-+|+|. |..+..+|+. |. +|++++.+++-++.+++. +...+ .....+ +..+ ..+.|
T Consensus 25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d----~~~~~~~~~f 96 (197)
T PRK11207 25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD----LNNLTFDGEY 96 (197)
T ss_pred hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC----hhhCCcCCCc
Confidence 34455678899999866 7777788875 77 899999998877665542 32211 110000 1111 12369
Q ss_pred cEEEEccCC--------hHHHHHHHHHhccCCceEEEec
Q 016660 271 DYCFECVGL--------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 271 d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
|+|+..... ...+..+.+.|+++ |.++.+.
T Consensus 97 D~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 97 DFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 999875431 24467888899997 9865543
No 254
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.081 Score=47.52 Aligned_cols=78 Identities=22% Similarity=0.259 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|..+...... +.... -+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4688999997 9999999988888899 799998887664432 233432 12 23322111111 11111 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 255
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.78 E-value=0.067 Score=48.48 Aligned_cols=78 Identities=22% Similarity=0.233 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-----cCCCeE----EeCCCCCchhH-HHHhh--C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVTEF----VNSKNCGDKSI-IIDMT--D 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-----lg~~~v----v~~~~~~~~~~-i~~~~--~ 267 (385)
.+.++||.|+ +++|...++.+...|+ +|+.+++++++.+.+.+ .+...+ .|..+...... +.... -
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4678999987 9999999999999999 79999888776553321 111121 23333211111 22222 1
Q ss_pred CCccEEEEccCC
Q 016660 268 GGADYCFECVGL 279 (385)
Q Consensus 268 g~~d~vid~~g~ 279 (385)
+.+|++|+++|.
T Consensus 86 g~id~li~~Ag~ 97 (265)
T PRK07062 86 GGVDMLVNNAGQ 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 368999999984
No 256
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.77 E-value=0.061 Score=48.56 Aligned_cols=78 Identities=26% Similarity=0.253 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH---cCCCe---EEeCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE---FVNSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~---lg~~~---vv~~~~~~~~~~-i~~~~--~g~~ 270 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++++...+..++ .+.+. ..|..+...... +.+.. .+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999999988999 88888877543333333 34332 234433211111 22222 1369
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|+++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999873
No 257
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.77 E-value=0.076 Score=47.79 Aligned_cols=78 Identities=23% Similarity=0.296 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHHcCCCe-E--EeCCCCCchhH-HHHhh--CCCcc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTE-F--VNSKNCGDKSI-IIDMT--DGGAD 271 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~--~~~~~~lg~~~-v--v~~~~~~~~~~-i~~~~--~g~~d 271 (385)
++.++||.|+ +++|...++.+...|+ +|+.+++++.. .+..++.+.+. + .|..+...... +.+.. -+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4788999987 9999999999999999 78877664321 22334455432 1 33333221111 22221 23699
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99998874
No 258
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.086 Score=47.18 Aligned_cols=78 Identities=24% Similarity=0.241 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-H---cCCC-e--EEeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVT-E--FVNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~---lg~~-~--vv~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. . .+.. . ..|..+...... ..... .++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999997 9999999998888999 8999988766543322 2 2222 1 123333111111 11111 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|+||+++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 259
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.13 Score=47.15 Aligned_cols=76 Identities=22% Similarity=0.300 Sum_probs=46.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-H---HcCCC-eE--EeCCCCCchhH-HHHhh-CCCccE
Q 016660 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-K---RFGVT-EF--VNSKNCGDKSI-IIDMT-DGGADY 272 (385)
Q Consensus 202 ~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~---~lg~~-~v--v~~~~~~~~~~-i~~~~-~g~~d~ 272 (385)
+.++||.|+|++|..++..+. .|+ +|+.+++++++.+.+ + ..|.. .+ .|..+...... +.... .+++|+
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 457888899999999888885 798 899888877655432 2 22432 12 23333211111 22211 146999
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|+++|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999985
No 260
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.079 Score=47.97 Aligned_cols=78 Identities=24% Similarity=0.351 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-c--CCC-eEE--eCCCCCchhHHHHhh--CCCcc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EFV--NSKNCGDKSIIIDMT--DGGAD 271 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-l--g~~-~vv--~~~~~~~~~~i~~~~--~g~~d 271 (385)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ + +.. +.+ |..+......+.+.. .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999987 9999999998888999 79999888776654432 2 211 222 222211111111111 24689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++|.++|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999875
No 261
>PRK00536 speE spermidine synthase; Provisional
Probab=95.73 E-value=0.051 Score=49.11 Aligned_cols=99 Identities=12% Similarity=-0.059 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc-CC-CeEEeCCCCCchhHHHHhhCCCccEE-EEc
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-TEFVNSKNCGDKSIIIDMTDGGADYC-FEC 276 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l-g~-~~vv~~~~~~~~~~i~~~~~g~~d~v-id~ 276 (385)
...++|||+|+|- |..+-.++|+-. +|+.++.+++-.+.++++ .. ...++.........+.+...+.||+| +|+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 3458899998765 556778888863 899999999888888872 21 00111100000001222223479988 577
Q ss_pred cCChHHHHHHHHHhccCCceEEEecc
Q 016660 277 VGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 277 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.-+++..+.+.++|+++ |.+|.-+.
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCC
Confidence 77777788999999997 99987754
No 262
>PRK01581 speE spermidine synthase; Validated
Probab=95.72 E-value=0.18 Score=47.61 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcC-----------CCeE-EeCCCCCchhHHHHhhC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----------VTEF-VNSKNCGDKSIIIDMTD 267 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg-----------~~~v-v~~~~~~~~~~i~~~~~ 267 (385)
....+|||+|+| .|..+..+++..+..+|++++.+++-.++++++. ..++ +-..+ ....+ ....
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~D--a~~fL-~~~~ 224 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCD--AKEFL-SSPS 224 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECc--HHHHH-HhcC
Confidence 445689999975 3667778888776679999999999999988631 1111 00111 11112 2233
Q ss_pred CCccEEEEccCC-----------hHHHHHHHHHhccCCceEEEecc
Q 016660 268 GGADYCFECVGL-----------ASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 268 g~~d~vid~~g~-----------~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
+.||+||--... .+.++.+.+.|+++ |.++.-..
T Consensus 225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 479998633221 23577899999997 99887654
No 263
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.72 E-value=0.21 Score=43.45 Aligned_cols=82 Identities=26% Similarity=0.333 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
-.|.+|+|.|.|.+|..+++.+...|+ +|+++++++++.+.+.+ +|+. .++..+ +.....|+++-|..
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~---------l~~~~~Dv~vp~A~ 94 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE---------IYSVDADVFAPCAL 94 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh---------hccccCCEEEeccc
Confidence 467899999999999999999999999 89999988887666544 4653 333322 11115889987665
Q ss_pred ChHHHHHHHHHhcc
Q 016660 279 LASLVQEAYACCRK 292 (385)
Q Consensus 279 ~~~~~~~~~~~l~~ 292 (385)
....-...++.++.
T Consensus 95 ~~~I~~~~~~~l~~ 108 (200)
T cd01075 95 GGVINDDTIPQLKA 108 (200)
T ss_pred ccccCHHHHHHcCC
Confidence 44323344555544
No 264
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.71 E-value=0.083 Score=47.55 Aligned_cols=78 Identities=23% Similarity=0.293 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-EE--eCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-vv--~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.|... .+ |..+...... +.... -+.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5788999987 9999999998888899 899888887655432 2223221 22 3333111111 21111 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|++.|.
T Consensus 88 ~d~li~~ag~ 97 (255)
T PRK07523 88 IDILVNNAGM 97 (255)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 265
>PRK00811 spermidine synthase; Provisional
Probab=95.68 E-value=0.08 Score=48.75 Aligned_cols=97 Identities=12% Similarity=0.144 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcC------C---CeE-EeCCCCCchhHHHHhhCCC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG------V---TEF-VNSKNCGDKSIIIDMTDGG 269 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg------~---~~v-v~~~~~~~~~~i~~~~~g~ 269 (385)
...++||++|+|. |..+..+++..+.++|++++.+++-.+.+++.- . .++ +-..+ ....+.. ..+.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~D--a~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGD--GIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECc--hHHHHhh-CCCc
Confidence 3467899999866 667777888777779999999999888887631 1 111 11111 1111222 3347
Q ss_pred ccEEEEccCC----------hHHHHHHHHHhccCCceEEEec
Q 016660 270 ADYCFECVGL----------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 270 ~d~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
||+||--... .+.++.+.+.|+++ |.++...
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 9999743211 33467889999997 9988753
No 266
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.68 E-value=0.11 Score=47.61 Aligned_cols=86 Identities=19% Similarity=0.227 Sum_probs=56.9
Q ss_pred EEEEEcCCHHHHHH-HHHHHHcCCCEEEEEcCCchH--HHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCC
Q 016660 204 TVVIFGLGSIGLAV-AEGARLCGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGL 279 (385)
Q Consensus 204 ~VlI~G~g~vG~~a-i~la~~~G~~~vi~~~~~~~~--~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 279 (385)
+|.|+|+|.+|... ..+++..+.+-+-+++.++++ +++++++|.....+ + +..+... .+|+||++++.
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~--~------~e~ll~~~dIDaV~iaTp~ 74 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE--G------VDGLLANPDIDIVFDATSA 74 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC--C------HHHHhcCCCCCEEEECCCc
Confidence 58899999999865 566666677333344555543 56778888764432 1 1222223 79999999999
Q ss_pred hHHHHHHHHHhccCCceEE
Q 016660 280 ASLVQEAYACCRKGWGKTI 298 (385)
Q Consensus 280 ~~~~~~~~~~l~~~~G~~v 298 (385)
....+.+..++..| -.++
T Consensus 75 ~~H~e~a~~al~aG-k~VI 92 (285)
T TIGR03215 75 KAHARHARLLAELG-KIVI 92 (285)
T ss_pred HHHHHHHHHHHHcC-CEEE
Confidence 98777777777774 4443
No 267
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.18 Score=46.00 Aligned_cols=77 Identities=16% Similarity=0.110 Sum_probs=48.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCC-eEE--eCCCCCchhH-HHHhh--CCCccEE
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSI-IIDMT--DGGADYC 273 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~-~vv--~~~~~~~~~~-i~~~~--~g~~d~v 273 (385)
+.+|||.|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ ++.. .++ |..+...... +.... -+++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457999987 9999999988888898 79998888777655443 2322 222 2222111111 22211 1368999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
|.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999885
No 268
>PLN02366 spermidine synthase
Probab=95.67 E-value=0.087 Score=48.98 Aligned_cols=99 Identities=16% Similarity=0.156 Sum_probs=63.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc-CC-------CeEEeCCCCCchhHHHHhhCCCcc
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV-------TEFVNSKNCGDKSIIIDMTDGGAD 271 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l-g~-------~~vv~~~~~~~~~~i~~~~~g~~d 271 (385)
...++||++|+|. |.++..++++-+..+|++++.+++-.+.++++ .. .++ .....+....+....++.||
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv-~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRV-NLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCce-EEEEChHHHHHhhccCCCCC
Confidence 4578899998866 66677888887777999999988878887763 11 111 00000111112222234799
Q ss_pred EEEEccCC----------hHHHHHHHHHhccCCceEEEec
Q 016660 272 YCFECVGL----------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 272 ~vid~~g~----------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
+||--... .+.++.+.++|+++ |.++.-+
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 98642222 24477899999997 9997654
No 269
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.093 Score=47.21 Aligned_cols=78 Identities=17% Similarity=0.155 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCC---eEEeCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~---~vv~~~~~~~~~~-i~~~~~--g~ 269 (385)
++.++||.|+ |++|...+..+...|+ +|+++++++++.+.+.+ .+.. ...|..+...... +..... +.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 5678999987 9999999999989999 89999888776543322 2332 1233333111111 222211 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999998874
No 270
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.081 Score=47.78 Aligned_cols=75 Identities=23% Similarity=0.249 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-c----CCC-eEE--eCCCCCchhHHHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFV--NSKNCGDKSIIIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-l----g~~-~vv--~~~~~~~~~~i~~~~~--g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+++++++++.+.+.+ + +.. .++ |..+ ...+..+.. +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~---~~~~~~~~~~~g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS---PEAREQLAAEAGD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC---HHHHHHHHHHhCC
Confidence 4689999987 9999999998888999 89999888776554321 2 322 222 2222 222333222 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 271
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.65 E-value=0.11 Score=45.54 Aligned_cols=99 Identities=20% Similarity=0.234 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCCeEE-eC------CCCCc---hhHHHHhh--
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV-NS------KNCGD---KSIIIDMT-- 266 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vv-~~------~~~~~---~~~i~~~~-- 266 (385)
.++.+||+.|+|. |.-++.||. .|+ .|++++.++.-++.+ ++.+..... +. ..... ...+..+.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5678999999876 777777775 699 899999999988864 333321100 00 00000 00011111
Q ss_pred -CCCccEEEEccCC--------hHHHHHHHHHhccCCceEEEecc
Q 016660 267 -DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 267 -~g~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.+.||.|+|+..- ...++.+.++|+++ |++++++.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1358999997542 23477899999997 98766654
No 272
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.65 E-value=0.035 Score=46.80 Aligned_cols=100 Identities=20% Similarity=0.193 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeC-CCC---------------C-chhHHH
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNC---------------G-DKSIII 263 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~-~~~---------------~-~~~~i~ 263 (385)
+..+|+|+|+|.+|+.|+++|+.+|+ +++..+..+++.+..+.++...+... .+. . ....+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34779999999999999999999999 89999999888888888887654331 110 0 111122
Q ss_pred HhhCCCccEEEEcc--CC---hHH-HHHHHHHhccCCceEEEeccC
Q 016660 264 DMTDGGADYCFECV--GL---ASL-VQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 264 ~~~~g~~d~vid~~--g~---~~~-~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+... .+|+||-+. .+ +.. -++.++.|+++ ..++.++..
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 2221 478888532 12 221 25678888886 777777653
No 273
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.65 E-value=0.11 Score=42.91 Aligned_cols=95 Identities=22% Similarity=0.210 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcCCCe-EEeCCCCCchhHHHHhhCCCccEEEEcc
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-FVNSKNCGDKSIIIDMTDGGADYCFECV 277 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~~~-vv~~~~~~~~~~i~~~~~g~~d~vid~~ 277 (385)
..+.+++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....+ . .+. -.++|+|+.|+
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~--~----~~~-~~~~Dvvi~~~ 89 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD--L----EEL-LAEADLIINTT 89 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc--h----hhc-cccCCEEEeCc
Confidence 457889999999999999998888864489999888777654 45555421 011111 1 111 13689999999
Q ss_pred CChHH----HHHHHHHhccCCceEEEecc
Q 016660 278 GLASL----VQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 278 g~~~~----~~~~~~~l~~~~G~~v~~g~ 302 (385)
+.... .......++++ ..++.++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~v~D~~~ 117 (155)
T cd01065 90 PVGMKPGDELPLPPSLLKPG-GVVYDVVY 117 (155)
T ss_pred CCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence 87652 11222345564 55555654
No 274
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.64 E-value=0.035 Score=54.77 Aligned_cols=94 Identities=13% Similarity=0.125 Sum_probs=61.8
Q ss_pred hhccCCCCCEEE----EEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eEEeCCCCCchhHHHHhhCC
Q 016660 195 RTANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 195 ~~~~~~~~~~Vl----I~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vv~~~~~~~~~~i~~~~~g 268 (385)
...++++++.+| |+|+ |++|.+++|+++..|+ .|+++...+.+....+..+.. .++|.....+...+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~-- 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY-- 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH--
Confidence 345677888887 7765 9999999999999999 888887665544333334444 355555533333222221
Q ss_pred CccEEEEccCChHHHHHHHHHhccCCceEEEeccCC
Q 016660 269 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 269 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
......++.+.++ |+++.++...
T Consensus 104 ------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 ------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred ------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 2356677788886 8888887643
No 275
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.63 E-value=0.09 Score=46.98 Aligned_cols=77 Identities=21% Similarity=0.263 Sum_probs=48.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH----HHHcCCC-eEEeCCCCCchhHHHHhhC------C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVT-EFVNSKNCGDKSIIIDMTD------G 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~----~~~lg~~-~vv~~~~~~~~~~i~~~~~------g 268 (385)
.+.+|||.|+ |.+|...+..+...|+ +|++++++.++... +++.+.. .++.. +......+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQV-DVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEC-CCCCHHHHHHHHHHHHHHhC
Confidence 4678999997 9999999988888899 89999887654432 2233322 12211 1122222222221 3
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
.+|++|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998864
No 276
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.15 Score=46.52 Aligned_cols=75 Identities=19% Similarity=0.246 Sum_probs=47.9
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe----EEeCCCCCchhH-HHHhh--CCCcc
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE----FVNSKNCGDKSI-IIDMT--DGGAD 271 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~----vv~~~~~~~~~~-i~~~~--~g~~d 271 (385)
++||+|+ |++|..+++.+...|+ +|+.+++++++.+.. +..+... ..|..+...... +.+.. .+++|
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 6899987 9999999999888999 788888877654432 2234321 234444222111 11211 13689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++|++.|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999974
No 277
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.069 Score=47.00 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=51.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eEEeCCCCCchhHHHHhhCC-CccEEEEccCC
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSIIIDMTDG-GADYCFECVGL 279 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 279 (385)
.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+.. ...|..+......+.....+ ++|++|.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 36899987 9999998888878899 788898888877777666643 22344432221112222233 69999998875
No 278
>PRK08589 short chain dehydrogenase; Validated
Probab=95.60 E-value=0.085 Score=48.13 Aligned_cols=78 Identities=23% Similarity=0.237 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH---cCCC-e--EEeCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-E--FVNSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~---lg~~-~--vv~~~~~~~~~~-i~~~~--~g~~ 270 (385)
++.++||.|+ +++|...++.+...|+ +|++++++++..+.+++ .+.. . ..|..+...... +.... -+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 4678999987 9999999988888999 88888887333333333 2322 1 234333211111 22221 1368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999998874
No 279
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.60 E-value=0.1 Score=47.00 Aligned_cols=78 Identities=22% Similarity=0.323 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eE--EeCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--v~~~~~~~~~~-i~~~~~--g~ 269 (385)
++.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+.. .. .|..+...... +.+... ++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5688999987 9999999999988999 8999988877655433 22322 12 23333111111 122211 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 280
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.58 E-value=0.083 Score=44.50 Aligned_cols=93 Identities=14% Similarity=0.248 Sum_probs=61.0
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC--CeEEeCCCCCchhHHHHhhCCCccEEEEccCCh
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~--~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 280 (385)
+|.|+|+ |-+|...++=|+.+|. .|+++.++++|+...+..-+ ..+++... +.+.. -|+|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~------~a~~l-~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS------LASDL-AGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh------hHhhh-cCCceEEEeccCC
Confidence 5788998 9999999999999999 89999999998765422211 11222211 11111 2799999998865
Q ss_pred ---------HHHHHHHHHhcc-CCceEEEeccCC
Q 016660 281 ---------SLVQEAYACCRK-GWGKTIVLGVDQ 304 (385)
Q Consensus 281 ---------~~~~~~~~~l~~-~~G~~v~~g~~~ 304 (385)
...+.++..++. +--|+..+|..+
T Consensus 74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 113345666665 224788887643
No 281
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.098 Score=47.47 Aligned_cols=77 Identities=18% Similarity=0.230 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++++++.+.. .+.+.. .+ +|..+...... +.... .++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999987 9999999999989999 899998877664432 222322 12 23333111111 22221 136
Q ss_pred ccEEEEccC
Q 016660 270 ADYCFECVG 278 (385)
Q Consensus 270 ~d~vid~~g 278 (385)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 899998876
No 282
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.53 E-value=0.22 Score=44.29 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=73.5
Q ss_pred hhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhhCC
Q 016660 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 194 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~~g 268 (385)
....++.+|++|+=.|.|+ |.+++.||++.|. .+|+..+..++..+.+++ +|....+.....+ +.+...+
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D----v~~~~~~ 161 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD----VREGIDE 161 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc----ccccccc
Confidence 3567899999999888776 8889999998875 489999998888776653 4543312111111 3333333
Q ss_pred -CccEE-EEccCChHHHHHHHHHhccCCceEEEecc
Q 016660 269 -GADYC-FECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 269 -~~d~v-id~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.||.| +|.----..++.+.+.|+++ |.++++.-
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 68877 56655557789999999997 99998864
No 283
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.53 E-value=0.24 Score=44.74 Aligned_cols=77 Identities=16% Similarity=0.258 Sum_probs=45.8
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCc---hHHHH-HHHc-CCC-eE--EeCCCCCchhH-HHHhhC-
Q 016660 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEI-GKRF-GVT-EF--VNSKNCGDKSI-IIDMTD- 267 (385)
Q Consensus 201 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~vi~~~~~~---~~~~~-~~~l-g~~-~v--v~~~~~~~~~~-i~~~~~- 267 (385)
.+.++||.|+ +++|...++.+...|+ +|+.+.++. ++.+. ..++ +.. .. .|..+...... +.....
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4678999986 5999999888888999 788876543 23332 2333 221 11 23333211111 222222
Q ss_pred -CCccEEEEccC
Q 016660 268 -GGADYCFECVG 278 (385)
Q Consensus 268 -g~~d~vid~~g 278 (385)
|.+|++++++|
T Consensus 85 ~g~ld~lv~nag 96 (257)
T PRK08594 85 VGVIHGVAHCIA 96 (257)
T ss_pred CCCccEEEECcc
Confidence 46999999876
No 284
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.53 E-value=0.22 Score=44.76 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=60.6
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc--CCCeE-EeCCCCCchhHHHHhhCCCccEEEE
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEF-VNSKNCGDKSIIIDMTDGGADYCFE 275 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l--g~~~v-v~~~~~~~~~~i~~~~~g~~d~vid 275 (385)
..+.+|||+|+ |.+|...++.+...|+ +|+++.+++++....... ++..+ .|..+ ....+.+....++|+||.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--GSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--CHHHHHHHhhcCCCEEEE
Confidence 34678999997 9999999988888898 788887877765433211 22211 23333 112233333226999998
Q ss_pred ccCChH-------------HHHHHHHHhccC-CceEEEeccC
Q 016660 276 CVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD 303 (385)
Q Consensus 276 ~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 303 (385)
+.|... ....+++.+... .++++.++..
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 876421 123344444432 2578887654
No 285
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.1 Score=46.65 Aligned_cols=78 Identities=21% Similarity=0.145 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-Hc--CCC-eEE--eCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF--GVT-EFV--NSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~l--g~~-~vv--~~~~~~~~~~-i~~~~--~g~~ 270 (385)
++.++||.|+ |.+|...++.+...|+ +|+.+.++.++.+... .+ +.. .++ |..+...... +.... -+++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999988888898 7888888776544322 22 322 222 3222111111 11111 1378
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
No 286
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.52 E-value=0.32 Score=43.49 Aligned_cols=102 Identities=22% Similarity=0.163 Sum_probs=58.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-CchHH----HHHHHcCCC-eE--EeCCCCCchhH-HHHhhC--C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKF----EIGKRFGVT-EF--VNSKNCGDKSI-IIDMTD--G 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~-~~~~~----~~~~~lg~~-~v--v~~~~~~~~~~-i~~~~~--g 268 (385)
.+.++||.|+ |.+|...++.+...|+ +|+.+.+ ..+.. ..+++.+.. .. .|..+...... +..... +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3578999987 9999999988888999 6655543 22222 223334432 12 23333111111 222211 3
Q ss_pred CccEEEEccCCh-------------------------HHHHHHHHHhccCCceEEEeccCC
Q 016660 269 GADYCFECVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 269 ~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
++|++|.+.|.. ...+.+.+.++.. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 689999999841 1123445566675 8999887643
No 287
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.52 E-value=0.089 Score=48.03 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=58.8
Q ss_pred CCCCEEEEEcC-CHHHHH-HHHHHHHcCCCEEEEEcCCchHHHHHH-----HcCC---CeEEeCCCCCc-hhHHHHhhCC
Q 016660 200 EVGSTVVIFGL-GSIGLA-VAEGARLCGATRIIGVDVISEKFEIGK-----RFGV---TEFVNSKNCGD-KSIIIDMTDG 268 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~-ai~la~~~G~~~vi~~~~~~~~~~~~~-----~lg~---~~vv~~~~~~~-~~~i~~~~~g 268 (385)
+.|.|.+|.|+ .++|.. |-+||| .|. +|+.+.++.+|++..+ +.++ ..++|..+.+. .+.+++.+.+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC
Confidence 45799999998 899976 666776 999 7999999999988654 3453 24678777542 3346777777
Q ss_pred -CccEEEEccCCh
Q 016660 269 -GADYCFECVGLA 280 (385)
Q Consensus 269 -~~d~vid~~g~~ 280 (385)
.+-++++++|-.
T Consensus 125 ~~VgILVNNvG~~ 137 (312)
T KOG1014|consen 125 LDVGILVNNVGMS 137 (312)
T ss_pred CceEEEEeccccc
Confidence 788999999853
No 288
>PRK08643 acetoin reductase; Validated
Probab=95.51 E-value=0.11 Score=46.69 Aligned_cols=77 Identities=16% Similarity=0.178 Sum_probs=48.5
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCCe-E--EeCCCCCchhH-HHHhh--CCCc
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-F--VNSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~-v--v~~~~~~~~~~-i~~~~--~g~~ 270 (385)
+.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+... . .|..+...... +.+.. .+++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 568999987 9999999999988999 8988888776654332 223221 1 23333111111 22221 1368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|.+.|.
T Consensus 81 d~vi~~ag~ 89 (256)
T PRK08643 81 NVVVNNAGV 89 (256)
T ss_pred CEEEECCCC
Confidence 999999874
No 289
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.50 E-value=0.31 Score=44.39 Aligned_cols=102 Identities=19% Similarity=0.351 Sum_probs=74.0
Q ss_pred hhhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCC-e--E--EeCCCCCchhHH
Q 016660 192 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-E--F--VNSKNCGDKSII 262 (385)
Q Consensus 192 al~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~-~--v--v~~~~~~~~~~i 262 (385)
.+.+..++++|.+||=+|+|- |-+++.+|+..|+ +|++++.|++..+.+++ .|.. + + -|+++
T Consensus 63 ~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd------- 133 (283)
T COG2230 63 LILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRD------- 133 (283)
T ss_pred HHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccc-------
Confidence 356788999999999999876 7778888998899 99999999998887664 5543 1 1 12222
Q ss_pred HHhhCCCccEEEE-----ccCC---hHHHHHHHHHhccCCceEEEeccCCCC
Q 016660 263 IDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGVDQPG 306 (385)
Q Consensus 263 ~~~~~g~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 306 (385)
+ .+.||-|+. -+|. +..++.+.+.|+++ |++.+.......
T Consensus 134 --~-~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 134 --F-EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred --c-ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 1 124776653 4444 35578899999997 999887766544
No 290
>PRK08317 hypothetical protein; Provisional
Probab=95.48 E-value=0.096 Score=46.47 Aligned_cols=102 Identities=27% Similarity=0.395 Sum_probs=68.1
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHHc----CCC-eEEeCCCCCchhHHHHhh
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSIIIDMT 266 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~l----g~~-~vv~~~~~~~~~~i~~~~ 266 (385)
+.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++.++.+++. +.. .+...+. .. ..+.
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~-~~----~~~~ 84 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA-DG----LPFP 84 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc-cc----CCCC
Confidence 34556788899999999976 888889998763 23899999999888877764 111 1111111 00 1122
Q ss_pred CCCccEEEEcc-----C-ChHHHHHHHHHhccCCceEEEec
Q 016660 267 DGGADYCFECV-----G-LASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 267 ~g~~d~vid~~-----g-~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
.+.||+|+-.. . -...++.+.++|+++ |.++...
T Consensus 85 ~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 85 DGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 34789887532 2 234578999999997 9988764
No 291
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.48 E-value=0.29 Score=42.29 Aligned_cols=103 Identities=20% Similarity=0.372 Sum_probs=62.2
Q ss_pred hhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCe--EEeCCCCCchhHHHHhhC
Q 016660 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSIIIDMTD 267 (385)
Q Consensus 194 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~--vv~~~~~~~~~~i~~~~~ 267 (385)
....++.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++..+. ...+..+ .
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~---~~~~~~~-~ 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSA---PECLAQL-A 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECch---HHHHhhC-C
Confidence 3455677889888888754 5556666665432389999999988776653 55543 222111 1111111 1
Q ss_pred CCccE-EEEccCC-hHHHHHHHHHhccCCceEEEecc
Q 016660 268 GGADY-CFECVGL-ASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 268 g~~d~-vid~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
..+|. .++.... ...++.+.+.|+++ |+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22344 4543222 35578899999997 99887753
No 292
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.47 E-value=0.24 Score=39.96 Aligned_cols=99 Identities=25% Similarity=0.253 Sum_probs=58.8
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHHH----HHHcC-CCeEEeCCCCC
Q 016660 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFEI----GKRFG-VTEFVNSKNCG 257 (385)
Q Consensus 202 ~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-------------------~~~~~----~~~lg-~~~vv~~~~~~ 257 (385)
..+|+|+|+|++|...+..+-..|+.+++.+|.+. .|.+. ++++. ..++.......
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 46899999999999999999999998999987542 12222 22232 22232222211
Q ss_pred chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCce-EEEecc
Q 016660 258 DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK-TIVLGV 302 (385)
Q Consensus 258 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~-~v~~g~ 302 (385)
.......+. .++|+||+|..+......+.+..... +. ++..+.
T Consensus 82 ~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~~ 125 (135)
T PF00899_consen 82 DEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAGV 125 (135)
T ss_dssp SHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEEE
T ss_pred ccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 122233333 36899999999877555555555553 44 444443
No 293
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.46 E-value=0.32 Score=37.85 Aligned_cols=74 Identities=24% Similarity=0.266 Sum_probs=53.9
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 205 VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+. .....+.+..-..++.++-+.+...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~-~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA-TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T-TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc-hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999765 899999999999999988854 444333 2333334332237899988887765
No 294
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.12 Score=46.76 Aligned_cols=78 Identities=22% Similarity=0.268 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH---cCCCe-E--EeCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVTE-F--VNSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~---lg~~~-v--v~~~~~~~~~~-i~~~~--~g~~ 270 (385)
++.++||.|+ |++|...++.+...|+ +|+.++++++..+..++ .+... . .|..+...... +.+.. .+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999999988999 79888887654443332 23321 1 23332111111 11211 1368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999998884
No 295
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.46 E-value=0.1 Score=46.75 Aligned_cols=75 Identities=16% Similarity=0.234 Sum_probs=48.5
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCe-E--EeCCCCCchhH-HHHhhC--CCccEEEE
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-F--VNSKNCGDKSI-IIDMTD--GGADYCFE 275 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~-v--v~~~~~~~~~~-i~~~~~--g~~d~vid 275 (385)
+++|.|+ |++|...+..+...|+ +|+++++++++.+.+.. ++... . .|..+...... +..... ++.|++|.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5899987 9999999999988999 89999888877665433 44321 1 23333111111 222211 36899999
Q ss_pred ccCC
Q 016660 276 CVGL 279 (385)
Q Consensus 276 ~~g~ 279 (385)
++|.
T Consensus 81 ~ag~ 84 (248)
T PRK10538 81 NAGL 84 (248)
T ss_pred CCCc
Confidence 8874
No 296
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.44 E-value=0.12 Score=46.48 Aligned_cols=78 Identities=24% Similarity=0.312 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCC-eEE--eCCCCCchhH-HHHhh--CCCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFV--NSKNCGDKSI-IIDMT--DGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~-~vv--~~~~~~~~~~-i~~~~--~g~~d~ 272 (385)
.+.++||.|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++.. ..+ |..+...... +.+.. -+.+|+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999987 9999999999998999 8999988887665433 34322 122 2222111111 22221 136899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998873
No 297
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.44 E-value=0.096 Score=47.77 Aligned_cols=99 Identities=20% Similarity=0.164 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC--
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG-- 278 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g-- 278 (385)
+..+|.|+|.|.+|.-++.+|-.+|+ +|+..+.+.+|++.+..+-..++-.... ....+.+... ++|++|.++=
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~s--t~~~iee~v~-~aDlvIgaVLIp 242 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYS--TPSNIEEAVK-KADLVIGAVLIP 242 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEc--CHHHHHHHhh-hccEEEEEEEec
Confidence 34558888999999999999999999 8999999999999888754444322222 2222222221 5899987652
Q ss_pred Ch----HHHHHHHHHhccCCceEEEeccCC
Q 016660 279 LA----SLVQEAYACCRKGWGKTIVLGVDQ 304 (385)
Q Consensus 279 ~~----~~~~~~~~~l~~~~G~~v~~g~~~ 304 (385)
+. ...++..+.|+++ +.++.+....
T Consensus 243 gakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 243 GAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred CCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 21 2256789999997 9998887644
No 298
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.44 E-value=0.058 Score=49.55 Aligned_cols=95 Identities=17% Similarity=0.050 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
..+.+++|+|+|++|.+++..+...|+.+|+++.++.++.+.+. .++...-+.. +... ... -..+|+||++++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~----~~~-~~~~DivInaTp 194 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLEL----QEE-LADFDLIINATS 194 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccc----hhc-cccCCEEEECCc
Confidence 45678999999999999999999999669999999988776543 3432110111 1000 010 125899999987
Q ss_pred ChHHH-----HHHHHHhccCCceEEEec
Q 016660 279 LASLV-----QEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 279 ~~~~~-----~~~~~~l~~~~G~~v~~g 301 (385)
....- ......+.++ ..++.+-
T Consensus 195 ~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 195 AGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 55310 1123456664 5555554
No 299
>PRK04457 spermidine synthase; Provisional
Probab=95.43 E-value=0.28 Score=44.61 Aligned_cols=94 Identities=13% Similarity=0.192 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc-CC----C--eEEeCCCCCchhHHHHhhCCCccE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSIIIDMTDGGADY 272 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l-g~----~--~vv~~~~~~~~~~i~~~~~g~~d~ 272 (385)
.+..+||++|.|+ |.++..+++.....+|++++.+++-.+.+++. +. + +++.. + ....+. ...+.||+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-D--a~~~l~-~~~~~yD~ 139 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-D--GAEYIA-VHRHSTDV 139 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-C--HHHHHH-hCCCCCCE
Confidence 4567899999876 77888888877544899999999999988763 32 1 12211 1 111122 22347998
Q ss_pred EE-EccCC---------hHHHHHHHHHhccCCceEEE
Q 016660 273 CF-ECVGL---------ASLVQEAYACCRKGWGKTIV 299 (385)
Q Consensus 273 vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 299 (385)
|+ |.... .+.++.+.+.|+++ |.++.
T Consensus 140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 85 54321 36688999999997 99876
No 300
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.42 E-value=0.067 Score=47.96 Aligned_cols=106 Identities=16% Similarity=0.221 Sum_probs=66.6
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHH----cCCCe-E-EeCCCCCchhH-HHH
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE-F-VNSKNCGDKSI-IID 264 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~----lg~~~-v-v~~~~~~~~~~-i~~ 264 (385)
+...+++.+|++||=.|.|+ |-++..+++..|- .+|+..+..+++.+.+++ .|... | +...+ .... ...
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence 34567899999999888765 7778888887752 389999999998887653 55532 2 22222 1111 111
Q ss_pred hhCCCccEE-EEccCChHHHHHHHHHh-ccCCceEEEecc
Q 016660 265 MTDGGADYC-FECVGLASLVQEAYACC-RKGWGKTIVLGV 302 (385)
Q Consensus 265 ~~~g~~d~v-id~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 302 (385)
-..+.+|.| +|.-.--.++..+.+.| +++ |+++.+.-
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 112368877 46655556799999999 887 99999863
No 301
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.12 Score=47.14 Aligned_cols=39 Identities=28% Similarity=0.339 Sum_probs=33.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~ 240 (385)
++.++||.|+ |.+|...++.+...|+ +|+.+.+++++.+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~ 45 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLA 45 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHH
Confidence 4678999997 9999999999999999 8999888766544
No 302
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.41 E-value=0.14 Score=45.61 Aligned_cols=78 Identities=21% Similarity=0.301 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-EE--eCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-vv--~~~~~~~~~~-i~~~~~--g~ 269 (385)
.+.++||.|+ |.+|...+..+...|+ +|+.+++++++.+.. +..+... ++ |..+...... +..... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999998888999 899898887654432 2233221 22 2222111111 222111 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 303
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.11 Score=47.60 Aligned_cols=78 Identities=23% Similarity=0.225 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-E--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||.|+ |++|...+..+...|+ +|+.+++++++.+.+ +..+.+. . .|..+...... +.... -+.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999999989999 788888777655432 2234322 1 23322111111 11111 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|++.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 304
>PRK07985 oxidoreductase; Provisional
Probab=95.39 E-value=0.34 Score=44.83 Aligned_cols=102 Identities=20% Similarity=0.094 Sum_probs=59.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc--hHHHHH----HHcCCCe-E--EeCCCCCchhH-HHHhhC-
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVTE-F--VNSKNCGDKSI-IIDMTD- 267 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~--~~~~~~----~~lg~~~-v--v~~~~~~~~~~-i~~~~~- 267 (385)
-++.++||.|+ |++|...++.+...|+ +|+.+.++. ++.+.+ ++.+... + .|..+...... +.+...
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35678999997 9999999999999999 788775432 222222 2334322 1 23333111111 222222
Q ss_pred -CCccEEEEccCCh--------------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 268 -GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 268 -g~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+++|+++.+.|.. ..++.++..++++ |+++.++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3689999987731 1123455556676 899887754
No 305
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.12 Score=46.36 Aligned_cols=77 Identities=23% Similarity=0.215 Sum_probs=48.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCC-eEE--eCCCCCchhH-HHHhhC--CCc
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSI-IIDMTD--GGA 270 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~-~vv--~~~~~~~~~~-i~~~~~--g~~ 270 (385)
+.++||.|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+.. .++ |..+...... +.+... +.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 467999987 9999999999999999 89999888766554332 2322 222 3322111111 222211 368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999873
No 306
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.14 Score=46.12 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch-HH-HH---HHHcCCCe-EE--eCCCCCchhH-HHHhh--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KF-EI---GKRFGVTE-FV--NSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~-~~-~~---~~~lg~~~-vv--~~~~~~~~~~-i~~~~--~g 268 (385)
++.++||.|+ +++|...++.+...|+ +|++++++++ .. +. +++.+... .+ |..+...... +.... -+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999999999999 7888877643 22 22 22334321 22 3222111111 22211 23
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
.+|++|++.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 68999999984
No 307
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.38 E-value=0.15 Score=45.94 Aligned_cols=78 Identities=19% Similarity=0.309 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHHcCCCe-E--EeCCCCCchhH-HHHhhC--CCcc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTE-F--VNSKNCGDKSI-IIDMTD--GGAD 271 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~--~~~~~~~lg~~~-v--v~~~~~~~~~~-i~~~~~--g~~d 271 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++.+. ..+.+++++... . .|..+...... +.+... +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999999999999 7887765432 223333444321 1 22222111111 222211 3689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++|+++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999874
No 308
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.38 E-value=0.19 Score=45.49 Aligned_cols=97 Identities=22% Similarity=0.208 Sum_probs=65.3
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eEEeCCCCCchhHHHHhhC-CCccE
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSIIIDMTD-GGADY 272 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vv~~~~~~~~~~i~~~~~-g~~d~ 272 (385)
....+.++++||=+|+|. |..+..+++..+..+|++++.++..++.+++.-.. .++..+ +..+.. +.+|+
T Consensus 25 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-------~~~~~~~~~fD~ 96 (258)
T PRK01683 25 ARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-------IASWQPPQALDL 96 (258)
T ss_pred hhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-------hhccCCCCCccE
Confidence 445567889999998865 66777888776434999999999888877764321 222211 112222 27999
Q ss_pred EEEccCC------hHHHHHHHHHhccCCceEEEe
Q 016660 273 CFECVGL------ASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 273 vid~~g~------~~~~~~~~~~l~~~~G~~v~~ 300 (385)
|+-...- ...++.+.+.|+++ |.++..
T Consensus 97 v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 97 IFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred EEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 9754331 24578899999997 998775
No 309
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.38 E-value=0.62 Score=41.91 Aligned_cols=95 Identities=15% Similarity=0.243 Sum_probs=61.7
Q ss_pred cCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eEEeCCCCCchhHHHHhhCCCccEEEEc
Q 016660 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSIIIDMTDGGADYCFEC 276 (385)
Q Consensus 198 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vv~~~~~~~~~~i~~~~~g~~d~vid~ 276 (385)
...++.+||-+|+|. |..+..+++ .|. .|+++|.+++.++.+++.... .++..+- .. ..+.++.||+|+..
T Consensus 39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~--~~~~~~~fD~V~s~ 110 (251)
T PRK10258 39 PQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ES--LPLATATFDLAWSN 110 (251)
T ss_pred CccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---cc--CcCCCCcEEEEEEC
Confidence 334578899999865 666655554 576 899999999998888775432 2221111 00 11222369999864
Q ss_pred cC------ChHHHHHHHHHhccCCceEEEec
Q 016660 277 VG------LASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 277 ~g------~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
.. ....+.++.+.++++ |.+++..
T Consensus 111 ~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~ 140 (251)
T PRK10258 111 LAVQWCGNLSTALRELYRVVRPG-GVVAFTT 140 (251)
T ss_pred chhhhcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence 32 224578899999997 9988664
No 310
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.38 E-value=0.13 Score=47.07 Aligned_cols=77 Identities=23% Similarity=0.202 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-H---HcCCC-eE--EeCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-K---RFGVT-EF--VNSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~---~lg~~-~v--v~~~~~~~~~~-i~~~~~--g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+ + +.+.. .. .|..+...... +..... +.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999987 9999999999989999 888888876654332 2 22332 12 22222111111 222211 36
Q ss_pred ccEEEEccC
Q 016660 270 ADYCFECVG 278 (385)
Q Consensus 270 ~d~vid~~g 278 (385)
+|++|.++|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 899999987
No 311
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.37 E-value=0.024 Score=46.70 Aligned_cols=94 Identities=19% Similarity=0.155 Sum_probs=56.5
Q ss_pred EEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCC-CCchhH--HH--HhhCCCccEEEEccCC
Q 016660 205 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN-CGDKSI--II--DMTDGGADYCFECVGL 279 (385)
Q Consensus 205 VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~-~~~~~~--i~--~~~~g~~d~vid~~g~ 279 (385)
|+|+|+|++|.+.+..++..|. .|..+.+.+ +.+..++.|..-. .... ...... .. ....+.+|+||-|+-.
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTIT-GPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEE-ETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEE-ecccceecccccccCcchhccCCCcEEEEEecc
Confidence 6899999999998888888999 898888777 7777776554211 1110 000000 00 1122379999999876
Q ss_pred hH---HHHHHHHHhccCCceEEEecc
Q 016660 280 AS---LVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 280 ~~---~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.. .++.+...+.++ ..++.+-+
T Consensus 78 ~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 78 YQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred cchHHHHHHHhhccCCC-cEEEEEeC
Confidence 54 233444444554 56776654
No 312
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.35 E-value=0.16 Score=44.97 Aligned_cols=84 Identities=20% Similarity=0.245 Sum_probs=59.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH--cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~--lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
+++|.|+|.+|...++.+...|. .|++++.++++.+...+ +.. +++..+. .....+++..-..+|+++-++|...
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~-t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA-TDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC-CCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 57899999999999999999999 89999999998777333 443 4444444 2222244432337999999999876
Q ss_pred HHHHHHHHhc
Q 016660 282 LVQEAYACCR 291 (385)
Q Consensus 282 ~~~~~~~~l~ 291 (385)
.+..+.+++
T Consensus 79 -~N~i~~~la 87 (225)
T COG0569 79 -VNSVLALLA 87 (225)
T ss_pred -HHHHHHHHH
Confidence 555555444
No 313
>PRK06720 hypothetical protein; Provisional
Probab=95.35 E-value=0.18 Score=42.50 Aligned_cols=39 Identities=26% Similarity=0.223 Sum_probs=32.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~ 240 (385)
++.+++|.|+ +++|...+..+...|+ +|++++++.+..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 5678999987 8999999988888898 8999887766543
No 314
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.33 E-value=0.15 Score=46.07 Aligned_cols=78 Identities=19% Similarity=0.154 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH---HHHHcCCC-eE--EeCCCCCchhH-HHHhh--CCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE---IGKRFGVT-EF--VNSKNCGDKSI-IIDMT--DGGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~---~~~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~~ 270 (385)
.+.++||.|+ |++|...++.+...|+ +|+++.++++..+ ...+.+.+ .+ .|..+...... +.+.. -+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999997 9999999999999999 7888877632222 22233432 12 23333111111 22221 1368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 315
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.33 E-value=0.26 Score=40.20 Aligned_cols=97 Identities=19% Similarity=0.262 Sum_probs=56.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHH----HHHHcCC-CeEEeCCCCCch
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFE----IGKRFGV-TEFVNSKNCGDK 259 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-------------------~~~~----~~~~lg~-~~vv~~~~~~~~ 259 (385)
+|+|+|+|++|...++.+-..|.+++..+|.+. .|.+ .++++.. ..+-.+......
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~~ 80 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGISE 80 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecCh
Confidence 489999999999999999999998899987541 1111 2223332 122111111111
Q ss_pred hHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCc-eEEEecc
Q 016660 260 SIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG-KTIVLGV 302 (385)
Q Consensus 260 ~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~g~ 302 (385)
.....+. .++|+||+|...........+..+.. + .++..+.
T Consensus 81 ~~~~~~~-~~~diVi~~~d~~~~~~~l~~~~~~~-~i~~i~~~~ 122 (143)
T cd01483 81 DNLDDFL-DGVDLVIDAIDNIAVRRALNRACKEL-GIPVIDAGG 122 (143)
T ss_pred hhHHHHh-cCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEcC
Confidence 1111222 26999999999877544455555553 4 3455544
No 316
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.33 E-value=0.21 Score=47.95 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC-------------------chHHHHH----HHcCC-CeEEeCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI-------------------SEKFEIG----KRFGV-TEFVNSKNC 256 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~-------------------~~~~~~~----~~lg~-~~vv~~~~~ 256 (385)
.+.+|+|+|+|++|..++..+...|+++++.++.+ ..|.+.+ +++.. ..+..+...
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 56789999999999999999999999999999876 2333322 22322 222222221
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhcc
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRK 292 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~ 292 (385)
-....+..+. .++|+||||+.+..+....-+....
T Consensus 214 ~~~~~~~~~~-~~~D~Vv~~~d~~~~r~~ln~~~~~ 248 (376)
T PRK08762 214 VTSDNVEALL-QDVDVVVDGADNFPTRYLLNDACVK 248 (376)
T ss_pred CChHHHHHHH-hCCCEEEECCCCHHHHHHHHHHHHH
Confidence 1111233332 2699999999987643333333333
No 317
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.31 E-value=0.34 Score=44.29 Aligned_cols=101 Identities=18% Similarity=0.239 Sum_probs=62.6
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCch---HHH-HHHHcCCCeE--EeCCCCCchhH-HHHhhC--C
Q 016660 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFE-IGKRFGVTEF--VNSKNCGDKSI-IIDMTD--G 268 (385)
Q Consensus 201 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~vi~~~~~~~---~~~-~~~~lg~~~v--v~~~~~~~~~~-i~~~~~--g 268 (385)
.+.++||.|+ +++|.++++.+...|+ +|+.++++++ +.+ ..++++.... .|..+...... +..... +
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4678999986 4899999998888999 7888877642 222 2234554322 34433221111 222222 4
Q ss_pred CccEEEEccCCh-----------------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 269 GADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 269 ~~d~vid~~g~~-----------------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
.+|++|+++|.. ...+.++..+.++ |+++.++..
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 689999998841 0124456667776 899887754
No 318
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.31 E-value=0.052 Score=56.23 Aligned_cols=78 Identities=26% Similarity=0.243 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch---------------------HHHHHHHcCCCeEEeCCCCCc
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGD 258 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~---------------------~~~~~~~lg~~~vv~~~~~~~ 258 (385)
..+.+|+|+|+|+.|+.++..+...|+ +|++++..+. ..++++++|++...+..-...
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 7888876532 355667788754333211001
Q ss_pred hhHHHHhhCCCccEEEEccCCh
Q 016660 259 KSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 259 ~~~i~~~~~g~~d~vid~~g~~ 280 (385)
. .+..+. .+||.||.++|..
T Consensus 404 i-~~~~~~-~~~DavilAtGa~ 423 (654)
T PRK12769 404 I-SLESLL-EDYDAVFVGVGTY 423 (654)
T ss_pred C-CHHHHH-hcCCEEEEeCCCC
Confidence 0 122221 2699999988863
No 319
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.30 E-value=0.28 Score=43.92 Aligned_cols=35 Identities=40% Similarity=0.474 Sum_probs=30.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~ 236 (385)
++.++||.|+ |.+|...++.+...|+ +|++++++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch
Confidence 4678999987 9999999998888999 888887765
No 320
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.28 E-value=0.22 Score=44.67 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=30.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
.+.+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34779999999999999999999999999988654
No 321
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.28 E-value=0.35 Score=42.36 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=63.6
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCe--EEeCCCCCchhHHHHhh
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSIIIDMT 266 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~--vv~~~~~~~~~~i~~~~ 266 (385)
+....+++++++||-+|+|. |..+..+++..+ +|++++.+++..+.+++ ++... ++..+. .. .+.
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~~--~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~---~~---~~~ 140 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLVR--RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG---WK---GWP 140 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHhC--EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc---cc---CCC
Confidence 34566788999999998765 555666666543 79999998877665543 45432 221111 00 111
Q ss_pred -CCCccEEEEccCChHHHHHHHHHhccCCceEEEec
Q 016660 267 -DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 267 -~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
.+.||+|+-............+.|+++ |+++..-
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 136999876555555467888999997 9987643
No 322
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.26 E-value=0.17 Score=44.98 Aligned_cols=78 Identities=21% Similarity=0.197 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eE--EeCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--v~~~~~~~~~~-i~~~~~--g~ 269 (385)
...++||.|+ |.+|..++..+...|+ +|+++++++++.+.+. +.+.. .+ .|..+...... +..... +.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999987 9999999999998999 8999988876654332 22322 12 23332111111 222111 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
.|++|.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 323
>PRK09242 tropinone reductase; Provisional
Probab=95.26 E-value=0.15 Score=45.87 Aligned_cols=78 Identities=19% Similarity=0.149 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-Hc-----CCCe-E--EeCCCCCchhH-HHHhh--C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVTE-F--VNSKNCGDKSI-IIDMT--D 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~l-----g~~~-v--v~~~~~~~~~~-i~~~~--~ 267 (385)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++ +.+. . .|..+...... +.+.. -
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4778999987 9999999999999999 7888888877655332 21 2221 1 23333111111 22211 2
Q ss_pred CCccEEEEccCC
Q 016660 268 GGADYCFECVGL 279 (385)
Q Consensus 268 g~~d~vid~~g~ 279 (385)
+++|++|.+.|.
T Consensus 87 g~id~li~~ag~ 98 (257)
T PRK09242 87 DGLHILVNNAGG 98 (257)
T ss_pred CCCCEEEECCCC
Confidence 368999999985
No 324
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.26 E-value=0.13 Score=47.01 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=59.1
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcC---CCeEEeCCCCCchhHHHHhhCCCccEEE
Q 016660 199 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFG---VTEFVNSKNCGDKSIIIDMTDGGADYCF 274 (385)
Q Consensus 199 ~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg---~~~vv~~~~~~~~~~i~~~~~g~~d~vi 274 (385)
..++.+++|+|+|++|.+++..+...|+ +|+++.+++++.+. ++.+. ....+... ......+|+||
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---------~~~~~~~DivI 183 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD---------ELPLHRVDLII 183 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh---------hhcccCccEEE
Confidence 3457889999999999999988888898 89999888777554 33332 21222111 11112589999
Q ss_pred EccCChHH--H---HHHHHHhccCCceEEEeccC
Q 016660 275 ECVGLASL--V---QEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 275 d~~g~~~~--~---~~~~~~l~~~~G~~v~~g~~ 303 (385)
+|++.... . ......++++ ..++.+...
T Consensus 184 natp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~ 216 (270)
T TIGR00507 184 NATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYN 216 (270)
T ss_pred ECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccC
Confidence 99986421 1 1123456664 566666543
No 325
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.12 Score=47.92 Aligned_cols=39 Identities=21% Similarity=0.212 Sum_probs=32.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~ 240 (385)
.+.+|||.|+ |++|..+++.+...|+ +|+.+.++.++.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~ 54 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGK 54 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 5688999987 9999999998888899 7888888776644
No 326
>PLN02253 xanthoxin dehydrogenase
Probab=95.25 E-value=0.13 Score=46.99 Aligned_cols=78 Identities=22% Similarity=0.220 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcCC--C-eE--EeCCCCCchhH-HHHhhC--CCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGV--T-EF--VNSKNCGDKSI-IIDMTD--GGA 270 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~--~-~v--v~~~~~~~~~~-i~~~~~--g~~ 270 (385)
.+.++||.|+ |++|...++.+...|+ +|++++++++..+. ..+++. . .. .|..+...... +..... +++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999888888899 88888877655432 333322 1 12 23333111111 121111 368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|+++|.
T Consensus 96 d~li~~Ag~ 104 (280)
T PLN02253 96 DIMVNNAGL 104 (280)
T ss_pred CEEEECCCc
Confidence 999998874
No 327
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.23 E-value=0.16 Score=45.39 Aligned_cols=76 Identities=21% Similarity=0.177 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eEEeCCCCCchhHHHHh----h--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSIIIDM----T--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~vv~~~~~~~~~~i~~~----~--~g 268 (385)
++.++||.|+ |.+|...++.+...|+ +|+.++++.++...+. +.+.. .++.. +......+.++ . .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFAC-DITDRDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEc-CCCCHHHHHHHHHHHHHHcC
Confidence 4678999997 9999999999988999 8888888776654332 22322 22222 21222222222 1 13
Q ss_pred CccEEEEccC
Q 016660 269 GADYCFECVG 278 (385)
Q Consensus 269 ~~d~vid~~g 278 (385)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 6899999997
No 328
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.23 E-value=0.27 Score=42.42 Aligned_cols=76 Identities=24% Similarity=0.257 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-c----CCCe-EEeCCCCCchhHHHHhhCCCccEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSIIIDMTDGGADYC 273 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-l----g~~~-vv~~~~~~~~~~i~~~~~g~~d~v 273 (385)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ + +... ..+..+ ...+.+... +.|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~-~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD---DAARAAAIK-GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC---HHHHHHHHh-cCCEE
Confidence 5788999997 9999998888888887 88888888777654432 2 2221 122222 122223222 58999
Q ss_pred EEccCChH
Q 016660 274 FECVGLAS 281 (385)
Q Consensus 274 id~~g~~~ 281 (385)
|.+++...
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99887665
No 329
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.20 E-value=0.17 Score=45.47 Aligned_cols=78 Identities=17% Similarity=0.245 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
++.++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.. .. .|..+...... +.... -+.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5788999987 9999999988888899 899998887654432 233432 12 23333111111 12211 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999998884
No 330
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.13 Score=46.18 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eE--EeCCCCCchhH-HHHhh--CCCccEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSI-IIDMT--DGGADYC 273 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~~d~v 273 (385)
.+.++||.|+ |++|...++.+...|+ +|+.+++++++ ...+.. .+ .|..+...... +.... -+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4788999987 9999999999988999 88888877654 112221 12 23333111111 22221 1368999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 998874
No 331
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.20 E-value=0.17 Score=45.50 Aligned_cols=78 Identities=26% Similarity=0.376 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HH---cCCCe-E--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FGVTE-F--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~---lg~~~-v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ .+ .+... . .|..+...... +.... -+.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999987 9999999999888999 888898887665432 22 23221 2 23222111111 21211 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|+++.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 8999999974
No 332
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.18 E-value=0.14 Score=47.83 Aligned_cols=39 Identities=28% Similarity=0.299 Sum_probs=33.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~ 240 (385)
.+.+++|+|+ +++|..+++.+...|+ +|+.+.++.++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~ 52 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGE 52 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 4678999997 9999999998888999 8888888877654
No 333
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.17 E-value=0.18 Score=46.56 Aligned_cols=37 Identities=22% Similarity=0.319 Sum_probs=32.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~ 236 (385)
.++.++||+|+|++|.+++..+...|+++|+++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3567899999999999988888899997799998885
No 334
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.15 Score=46.08 Aligned_cols=80 Identities=23% Similarity=0.275 Sum_probs=49.1
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHc-CCCEEEEEcCCchH-HH-H---HHHcCC-C-eE--EeCCCCCchhH-HHHhh
Q 016660 199 VEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK-FE-I---GKRFGV-T-EF--VNSKNCGDKSI-IIDMT 266 (385)
Q Consensus 199 ~~~~~~VlI~G~-g~vG~~ai~la~~~-G~~~vi~~~~~~~~-~~-~---~~~lg~-~-~v--v~~~~~~~~~~-i~~~~ 266 (385)
+..+.+|||.|+ |++|...++.+... |+ +|+++++++++ .+ . +++.+. . ++ .|..+...... +.+..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456788999997 99999988876666 47 88888887764 33 2 233342 1 22 23333222111 33322
Q ss_pred C-CCccEEEEccCC
Q 016660 267 D-GGADYCFECVGL 279 (385)
Q Consensus 267 ~-g~~d~vid~~g~ 279 (385)
. ++.|++|.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 479999987765
No 335
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.15 Score=46.56 Aligned_cols=36 Identities=39% Similarity=0.426 Sum_probs=30.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 237 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~ 237 (385)
++.++||.|+ |++|...++.+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999997 9999999998888999 7888877653
No 336
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.17 E-value=0.18 Score=44.83 Aligned_cols=77 Identities=22% Similarity=0.263 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCC-eEEeCCCCCchhHHHHh----h--CCCcc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFVNSKNCGDKSIIIDM----T--DGGAD 271 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~-~vv~~~~~~~~~~i~~~----~--~g~~d 271 (385)
++.++||.|+ |.+|...++.+...|+ .|+..+++.++.+.+ ..++.. .++. -+......+.++ . -+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFP-ANLSDRDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEE-ccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4678999997 9999999998888998 788887776665543 334432 2221 121222222221 1 13689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999884
No 337
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.1 Score=46.06 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=47.7
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCCeE-EeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~v-v~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
+++|.|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+......+.+...+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 4899987 9999999999988999 888888887776543 44444322 3333321111122222235899998865
No 338
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.14 E-value=0.12 Score=48.37 Aligned_cols=77 Identities=18% Similarity=0.159 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcC---CC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg---~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
.+.++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ +++. .. .+ .|..+...... +.... .+.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 4678999987 9999999998888898 888888887765433 3332 11 11 23333111111 22211 126
Q ss_pred ccEEEEccC
Q 016660 270 ADYCFECVG 278 (385)
Q Consensus 270 ~d~vid~~g 278 (385)
+|++|+++|
T Consensus 84 iD~li~nAg 92 (322)
T PRK07453 84 LDALVCNAA 92 (322)
T ss_pred ccEEEECCc
Confidence 899999987
No 339
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.17 Score=45.33 Aligned_cols=78 Identities=17% Similarity=0.155 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eEE--eCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~vv--~~~~~~~~~~-i~~~~~--g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+.. +.+ |..+...... +..... +.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999999998999 8999988776654332 22322 222 3333111111 222221 35
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|+++++.|.
T Consensus 86 id~li~~ag~ 95 (252)
T PRK07035 86 LDILVNNAAA 95 (252)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 340
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.13 E-value=0.64 Score=42.69 Aligned_cols=59 Identities=20% Similarity=0.276 Sum_probs=44.9
Q ss_pred hhccCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc--CCchHHHHHHHcCCCeEEeCC
Q 016660 195 RTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD--VISEKFEIGKRFGVTEFVNSK 254 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G-~g~vG~~ai~la~~~G~~~vi~~~--~~~~~~~~~~~lg~~~vv~~~ 254 (385)
....+++|.+| |=+ +|..|...+.+|+.+|++-+++.. .+.+|..+++.+|+.-++.+.
T Consensus 55 ~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45568999944 445 499999999999999996555553 356788899999997666555
No 341
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.15 Score=46.29 Aligned_cols=75 Identities=27% Similarity=0.252 Sum_probs=46.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCeEEeCCCCCchhHHHHhh------CCCccE
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSIIIDMT------DGGADY 272 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~vv~~~~~~~~~~i~~~~------~g~~d~ 272 (385)
++||.|+ |++|...++.+...|+ +|+.++++.++.+.+ +..+.+..+-.-+......+.++. .+++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899987 9999999988888899 788888877665432 233433221111211222222211 136999
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|+++|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999884
No 342
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.11 E-value=0.17 Score=46.19 Aligned_cols=76 Identities=16% Similarity=0.148 Sum_probs=48.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCC-eE--EeCCCCCchhH-HHHhh--CCCccEEE
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSI-IIDMT--DGGADYCF 274 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~-~v--v~~~~~~~~~~-i~~~~--~g~~d~vi 274 (385)
.++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++ ++.. .+ .|..+...... +.+.. .+++|++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57999987 9999999988888899 89888888877665543 2322 11 23333111111 22211 13689999
Q ss_pred EccCC
Q 016660 275 ECVGL 279 (385)
Q Consensus 275 d~~g~ 279 (385)
.++|.
T Consensus 82 ~~ag~ 86 (276)
T PRK06482 82 SNAGY 86 (276)
T ss_pred ECCCC
Confidence 99874
No 343
>PLN03075 nicotianamine synthase; Provisional
Probab=95.08 E-value=0.17 Score=46.49 Aligned_cols=96 Identities=15% Similarity=0.158 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHHcC-----CCeEEeCCCCCchhHHHHhh--CCCccE
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSIIIDMT--DGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~lg-----~~~vv~~~~~~~~~~i~~~~--~g~~d~ 272 (385)
+.++|+-+|+|+.++.++.+++.... .+++.+|.+++..+.+++.- ...-+.....+ +.... .++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D----a~~~~~~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD----VMDVTESLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc----hhhcccccCCcCE
Confidence 77999999999999998888875532 28999999999888887633 11111111111 12222 237999
Q ss_pred EEEcc-------CChHHHHHHHHHhccCCceEEEec
Q 016660 273 CFECV-------GLASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 273 vid~~-------g~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
||-.+ .-...++.+.+.|++| |.++.=.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 98664 2234578899999997 8777554
No 344
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.19 Score=44.58 Aligned_cols=77 Identities=10% Similarity=-0.022 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-EE--eCCCCCchhH-HHHhh--CC-
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSI-IIDMT--DG- 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-vv--~~~~~~~~~~-i~~~~--~g- 268 (385)
++.++||.|+ +++|...+..+...|+ +|+.+.+++++.+.+ ++.+.+. .+ |..+...... +.+.. -+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999987 9999998888888999 788888888765433 2335432 22 3222111111 22211 14
Q ss_pred CccEEEEccC
Q 016660 269 GADYCFECVG 278 (385)
Q Consensus 269 ~~d~vid~~g 278 (385)
.+|++|.+.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6899999986
No 345
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.06 E-value=0.19 Score=45.60 Aligned_cols=78 Identities=22% Similarity=0.330 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-E--EeCCCCCchhH-HHHhhC--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--v~~~~~~~~~~-i~~~~~--g~ 269 (385)
.+.++||.|+ +++|...+..+...|+ +|+.+++++++.+.+ ++.|... . .|..+...... +.+... +.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5678999987 9999998888888899 788888887665432 2334332 2 23332111111 222111 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|++.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 346
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.16 Score=46.29 Aligned_cols=77 Identities=23% Similarity=0.224 Sum_probs=50.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcC-CCe-EEeCCCCCchhH-HHHhh--CCCccEEE
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG-VTE-FVNSKNCGDKSI-IIDMT--DGGADYCF 274 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg-~~~-vv~~~~~~~~~~-i~~~~--~g~~d~vi 274 (385)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +.++ +.. ..|..+...... +.... .++.|++|
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 568999997 9999999988888899 788888888776543 3444 221 234443222111 22222 14689999
Q ss_pred EccCC
Q 016660 275 ECVGL 279 (385)
Q Consensus 275 d~~g~ 279 (385)
++.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99874
No 347
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.06 E-value=0.22 Score=39.00 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=59.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCCchHHHH-HHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCC
Q 016660 204 TVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGL 279 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~--G~~~vi~~~~~~~~~~~-~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 279 (385)
+|.|+|.|.+|.....-++.. +.+-+-++++++++.+. .+++|.. .+ .+ +.++... .+|+|+-+++.
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~------~~~ll~~~~~D~V~I~tp~ 72 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TD------LEELLADEDVDAVIIATPP 72 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SS------HHHHHHHTTESEEEEESSG
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hH------HHHHHHhhcCCEEEEecCC
Confidence 588999999999887666654 55333456666666664 5667776 33 22 2333332 79999999999
Q ss_pred hHHHHHHHHHhccCCceEEEec
Q 016660 280 ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 280 ~~~~~~~~~~l~~~~G~~v~~g 301 (385)
....+.+..++.. |.-+++-
T Consensus 73 ~~h~~~~~~~l~~--g~~v~~E 92 (120)
T PF01408_consen 73 SSHAEIAKKALEA--GKHVLVE 92 (120)
T ss_dssp GGHHHHHHHHHHT--TSEEEEE
T ss_pred cchHHHHHHHHHc--CCEEEEE
Confidence 8878888888888 4566664
No 348
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=95.04 E-value=0.43 Score=44.97 Aligned_cols=130 Identities=21% Similarity=0.197 Sum_probs=81.2
Q ss_pred EEEEEcCCHHH-HHHHHHHHHcC--CCEEEEEcCCchHHH-HHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccC
Q 016660 204 TVVIFGLGSIG-LAVAEGARLCG--ATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVG 278 (385)
Q Consensus 204 ~VlI~G~g~vG-~~ai~la~~~G--~~~vi~~~~~~~~~~-~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g 278 (385)
+|.|+|+|.++ ...+..++..+ +..+-++++++++.+ .++++|....+ .+ ..++... .+|+|+-++.
T Consensus 5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~--~~------~~~ll~~~~iD~V~Iatp 76 (342)
T COG0673 5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY--TD------LEELLADPDIDAVYIATP 76 (342)
T ss_pred EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc--CC------HHHHhcCCCCCEEEEcCC
Confidence 58899997555 45666666554 445556677887754 56678876322 22 3444444 6999999999
Q ss_pred ChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHH------Hhhc-CcEEEEeeecCCCCCCcHHHHHHHHHcCCCC
Q 016660 279 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE------VLHS-GKILMGSLFGGLKAKSDIPILLKRYMDKELE 350 (385)
Q Consensus 279 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~------~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~ 350 (385)
.....+.+.+.|.. |+-|++-.. +..+... +-.+ ++.+.=. ..+.....++.+-+++.+|.+-
T Consensus 77 ~~~H~e~~~~AL~a--GkhVl~EKP-----la~t~~ea~~l~~~a~~~~~~l~v~--~~~Rf~p~~~~~k~li~~g~lG 146 (342)
T COG0673 77 NALHAELALAALEA--GKHVLCEKP-----LALTLEEAEELVELARKAGVKLMVG--FNRRFDPAVQALKELIDSGALG 146 (342)
T ss_pred ChhhHHHHHHHHhc--CCEEEEcCC-----CCCCHHHHHHHHHHHHHcCCceeee--hhhhcCHHHHHHHHHHhcCCcC
Confidence 98889999999999 677777432 3333322 2222 3333222 2233335688888888888543
No 349
>PLN02244 tocopherol O-methyltransferase
Probab=95.02 E-value=0.18 Score=47.77 Aligned_cols=94 Identities=21% Similarity=0.285 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc----CCC-e--EEeCCCCCchhHHHHhhCCCccE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-E--FVNSKNCGDKSIIIDMTDGGADY 272 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l----g~~-~--vv~~~~~~~~~~i~~~~~g~~d~ 272 (385)
+++++||=+|+|. |..+..+++..|+ +|++++.++...+.+++. |.. . ++..+. .. ..+.++.||+
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~--~~~~~~~FD~ 189 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LN--QPFEDGQFDL 189 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---cc--CCCCCCCccE
Confidence 6788999998865 6677788887788 899999998877766542 331 1 111111 00 1122347999
Q ss_pred EEEccCC------hHHHHHHHHHhccCCceEEEec
Q 016660 273 CFECVGL------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 273 vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
|+-.-.. ...++++.+.|++| |++++..
T Consensus 190 V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~ 223 (340)
T PLN02244 190 VWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT 223 (340)
T ss_pred EEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 9864322 24578899999997 9988764
No 350
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.14 Score=45.60 Aligned_cols=43 Identities=19% Similarity=0.155 Sum_probs=35.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcC
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG 246 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg 246 (385)
.++||.|+ |++|...+..+...|+ +|+++++++++.+.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~ 45 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQS 45 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc
Confidence 46899987 9999998888888899 7999999888777665443
No 351
>PRK12743 oxidoreductase; Provisional
Probab=95.02 E-value=0.22 Score=44.90 Aligned_cols=77 Identities=17% Similarity=0.097 Sum_probs=46.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CCchHHHH----HHHcCCC-eE--EeCCCCCchhH-HHHhhC--CC
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEI----GKRFGVT-EF--VNSKNCGDKSI-IIDMTD--GG 269 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~-~~~~~~~~----~~~lg~~-~v--v~~~~~~~~~~-i~~~~~--g~ 269 (385)
+.++||.|+ |++|..+++.+...|+ +|+.+. ++.++.+. ++..|.. ++ .|..+...... +.+... +.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999987 9999999999999999 776664 34443332 2334543 22 23333111111 222211 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 352
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.00 E-value=0.19 Score=46.34 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=56.3
Q ss_pred CEEEEEcCCHHHHH-HHHHHHHcCCCEEEEEcCCch--HHHHHHHcCCCeEEeCCCCCchhHHHHhhC-CCccEEEEccC
Q 016660 203 STVVIFGLGSIGLA-VAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSIIIDMTD-GGADYCFECVG 278 (385)
Q Consensus 203 ~~VlI~G~g~vG~~-ai~la~~~G~~~vi~~~~~~~--~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~-g~~d~vid~~g 278 (385)
-+|.|+|.|.+|.. +..+.+.-+.+-+.+++.+++ .+++++++|.....+ ..+.+.+... ..+|+||++++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~~-----~ie~LL~~~~~~dIDiVf~AT~ 79 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSAE-----GIDGLLAMPEFDDIDIVFDATS 79 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCcccC-----CHHHHHhCcCCCCCCEEEECCC
Confidence 46899999999987 445555556744444555443 446778888653321 1111222111 26999999999
Q ss_pred ChHHHHHHHHHhccCCceEEEe
Q 016660 279 LASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 279 ~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
.....+.+..++..| -.++..
T Consensus 80 a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 80 AGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred HHHHHHHHHHHHHcC-CeEEEC
Confidence 988677777777764 444443
No 353
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.00 E-value=0.27 Score=46.43 Aligned_cols=35 Identities=29% Similarity=0.321 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
.+.+|+|+|+|++|..+++.+-..|+.+++.+|.+
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35679999999999999999999999889988875
No 354
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.97 E-value=0.14 Score=48.63 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH-HHHHcC--CCeEEeCCCCCchhHHHHhhCC-CccEEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-IGKRFG--VTEFVNSKNCGDKSIIIDMTDG-GADYCFE 275 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~-~~~~lg--~~~vv~~~~~~~~~~i~~~~~g-~~d~vid 275 (385)
++.+|||.|+ |.+|..+++.+...|+ +|+++++++.... ....++ ....+-.-+......+..+..+ ++|+||+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 4678999987 9999999999999999 7888877655322 112222 1111111121223335555555 7899999
Q ss_pred ccCC
Q 016660 276 CVGL 279 (385)
Q Consensus 276 ~~g~ 279 (385)
+++.
T Consensus 82 ~A~~ 85 (349)
T TIGR02622 82 LAAQ 85 (349)
T ss_pred CCcc
Confidence 9973
No 355
>PRK12367 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.2 Score=45.07 Aligned_cols=73 Identities=21% Similarity=0.275 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc-hHHHHHHHcCCCeE--EeCCCCCchhHHHHhhCCCccEEEEc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEF--VNSKNCGDKSIIIDMTDGGADYCFEC 276 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~-~~~~~~~~lg~~~v--v~~~~~~~~~~i~~~~~g~~d~vid~ 276 (385)
.+.++||.|+ |++|...++.+...|+ +|+++++++ +..+... .+.... .|..+ ...+.... +.+|++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~---~~~~~~~~-~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK---EESLDKQL-ASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC---HHHHHHhc-CCCCEEEEC
Confidence 3678999987 9999999999999999 888887765 2222211 111222 23322 22233332 369999999
Q ss_pred cCC
Q 016660 277 VGL 279 (385)
Q Consensus 277 ~g~ 279 (385)
+|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 975
No 356
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=94.95 E-value=0.49 Score=41.26 Aligned_cols=93 Identities=17% Similarity=0.177 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch-HHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGL 279 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~-~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~ 279 (385)
.|.+|||+|+|.+|..-++.+...|+ .|++++.... .++.+.+.|--..+ ..+ +.. ... .++|+||-+.+.
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~-~~~--~~~---~dl-~~~~lVi~at~d 79 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWL-ARC--FDA---DIL-EGAFLVIAATDD 79 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEE-eCC--CCH---HHh-CCcEEEEECCCC
Confidence 46799999999999999999999999 7888865432 22333333311111 122 111 111 268999999999
Q ss_pred hHHHHHHHHHhccCCceEEEecc
Q 016660 280 ASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 280 ~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
+..-.......+.. |..|....
T Consensus 80 ~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 80 EELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred HHHHHHHHHHHHHc-CCEEEECC
Confidence 87334455555554 77776654
No 357
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.93 E-value=0.26 Score=46.52 Aligned_cols=35 Identities=31% Similarity=0.333 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
...+|+|+|+|++|-.+++.+...|..+++.+|.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45779999999999999999999999999999875
No 358
>PLN02780 ketoreductase/ oxidoreductase
Probab=94.93 E-value=0.12 Score=48.40 Aligned_cols=77 Identities=18% Similarity=0.189 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-----cC-CC---eEEeCCCCCchh---HHHHhhC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FG-VT---EFVNSKNCGDKS---IIIDMTD 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-----lg-~~---~vv~~~~~~~~~---~i~~~~~ 267 (385)
.|.++||.|+ +++|...++.+...|+ +|+.+++++++.+.+.+ .+ .. ..+|..+ +... .+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 4789999997 9999998888888899 79989998887664321 22 11 1234433 1122 2334444
Q ss_pred C-CccEEEEccCC
Q 016660 268 G-GADYCFECVGL 279 (385)
Q Consensus 268 g-~~d~vid~~g~ 279 (385)
+ .+|++++++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 4 57799998873
No 359
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.91 E-value=0.26 Score=43.24 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
...+|+|+|+|++|-..++.+-..|..+++.+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45679999999999999999999999889999866
No 360
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.91 E-value=0.2 Score=44.72 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCCchHHHH----HHHcCCCe-E--EeCCCCCchhH-HHHhh--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEI----GKRFGVTE-F--VNSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~-~~~~~~~~~~----~~~lg~~~-v--v~~~~~~~~~~-i~~~~--~g 268 (385)
++.++||.|+ |.+|...+..+...|+ +|+. ..++.++.+. +++.+... . .|..+...... +.+.. .+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999987 9999999999999999 6655 4555554432 23344432 2 22222111111 21221 13
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 361
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.91 E-value=0.37 Score=43.34 Aligned_cols=91 Identities=19% Similarity=0.275 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHH----HHHHcCCC-eEEeCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFE----IGKRFGVT-EFVNSKNC 256 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-------------------~~~~----~~~~lg~~-~vv~~~~~ 256 (385)
.+.+|+|+|+|++|..+++.+...|..+++.+|.+. .|.+ .++++... .+......
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~ 110 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINAR 110 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEecc
Confidence 457899999999999999999999998888886542 1111 22233322 22222221
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhcc
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRK 292 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~ 292 (385)
-....+.++. ..+|+||||..........-+....
T Consensus 111 i~~~~~~~~~-~~~DiVi~~~D~~~~r~~ln~~~~~ 145 (245)
T PRK05690 111 LDDDELAALI-AGHDLVLDCTDNVATRNQLNRACFA 145 (245)
T ss_pred CCHHHHHHHH-hcCCEEEecCCCHHHHHHHHHHHHH
Confidence 1111222222 2699999999988754434444444
No 362
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=94.90 E-value=0.42 Score=46.84 Aligned_cols=102 Identities=20% Similarity=0.287 Sum_probs=64.2
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHH----HcCCCeE--EeCCCCCchhHHHHhhCC
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~----~lg~~~v--v~~~~~~~~~~i~~~~~g 268 (385)
..+++++++||=.|+|+ |..+++++..++ -.+|++++.++++++.++ .+|.+.+ +..+. ..+.....+
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da----~~l~~~~~~ 306 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA----ERLTEYVQD 306 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch----hhhhhhhhc
Confidence 45678899988887755 445556666552 238999999999988765 4666532 22111 112222234
Q ss_pred CccEEE-E--ccCCh-------------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 269 GADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 269 ~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
.||.|+ | |+|.. ..+..+++.+++| |.+++.-.+
T Consensus 307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs 368 (431)
T PRK14903 307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT 368 (431)
T ss_pred cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence 699886 3 44432 2256788999997 998765543
No 363
>PLN02823 spermine synthase
Probab=94.88 E-value=0.33 Score=45.72 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=60.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC-C-eEEe-CC----CCCchhHHHHhhCCCccEE
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-T-EFVN-SK----NCGDKSIIIDMTDGGADYC 273 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~-~-~vv~-~~----~~~~~~~i~~~~~g~~d~v 273 (385)
...+|||+|+|. |..+..+++..+.++|++++.+++-.++++++-. . ..++ .+ -.+....+ +...+.||+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L-~~~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAEL-EKRDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHH-hhCCCCccEE
Confidence 456899998764 5566778887777799999999999999887421 1 0110 00 00011112 2233479998
Q ss_pred E-EccC-----------ChHHHH-HHHHHhccCCceEEEec
Q 016660 274 F-ECVG-----------LASLVQ-EAYACCRKGWGKTIVLG 301 (385)
Q Consensus 274 i-d~~g-----------~~~~~~-~~~~~l~~~~G~~v~~g 301 (385)
| |+.. +.+.++ .+.+.|+++ |.++.-.
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 5 5321 123455 788999997 9887543
No 364
>PRK07574 formate dehydrogenase; Provisional
Probab=94.88 E-value=0.13 Score=49.31 Aligned_cols=89 Identities=20% Similarity=0.200 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCCh
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 280 (385)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..+.+|+... .+ +.++.. ..|+|+-+.+..
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~---~~------l~ell~-~aDvV~l~lPlt 259 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH---VS------FDSLVS-VCDVVTIHCPLH 259 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec---CC------HHHHhh-cCCEEEEcCCCC
Confidence 57889999999999999999999999 89999887644444444553211 11 122221 367777766633
Q ss_pred HH----H-HHHHHHhccCCceEEEec
Q 016660 281 SL----V-QEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 281 ~~----~-~~~~~~l~~~~G~~v~~g 301 (385)
.. + .+.+..|+++ ..+|.++
T Consensus 260 ~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 260 PETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred HHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 21 1 2456677775 6666665
No 365
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.86 E-value=0.33 Score=38.78 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=58.0
Q ss_pred EEEEcC-CHHHHHHHHHHHHcC--CCEEEEEcCCchH---HHHHHHcCCCeEEeCCCCCchh------------------
Q 016660 205 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEK---FEIGKRFGVTEFVNSKNCGDKS------------------ 260 (385)
Q Consensus 205 VlI~G~-g~vG~~ai~la~~~G--~~~vi~~~~~~~~---~~~~~~lg~~~vv~~~~~~~~~------------------ 260 (385)
|.|+|+ |++|.-++.+.+... + +|++......- .+.+++|....++-.++.....
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999999886 6 67776543332 2345568877776554421111
Q ss_pred -HHHHhhC-CCccEEEEccCChHHHHHHHHHhccCCceEEEecc
Q 016660 261 -IIIDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 261 -~i~~~~~-g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.+.+... ..+|+|+.++-+-..+...+..++. |+-+.+.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~--gk~iaLAN 121 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA--GKDIALAN 121 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT--TSEEEE--
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC--CCeEEEec
Confidence 1223333 3688888888777778888888887 45555443
No 366
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=94.86 E-value=0.16 Score=42.46 Aligned_cols=88 Identities=23% Similarity=0.221 Sum_probs=58.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHH
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLV 283 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~ 283 (385)
+|-++|.|.+|...++-+...|+ .|.+.++++++.+.+.+.|+... + ....+.+ ..|+||-|+......
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~-----s~~e~~~----~~dvvi~~v~~~~~v 71 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D-----SPAEAAE----QADVVILCVPDDDAV 71 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S-----SHHHHHH----HBSEEEE-SSSHHHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h-----hhhhHhh----cccceEeecccchhh
Confidence 68899999999999998889999 89999999999998888774322 1 1111111 258999998887656
Q ss_pred HHHHH------HhccCCceEEEeccC
Q 016660 284 QEAYA------CCRKGWGKTIVLGVD 303 (385)
Q Consensus 284 ~~~~~------~l~~~~G~~v~~g~~ 303 (385)
+..+. .+.++ ..++.++..
T Consensus 72 ~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 72 EAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred hhhhhhhHHhhccccc-eEEEecCCc
Confidence 55444 34554 556666543
No 367
>PRK04266 fibrillarin; Provisional
Probab=94.85 E-value=0.39 Score=42.61 Aligned_cols=102 Identities=13% Similarity=0.144 Sum_probs=61.6
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC--C--eEEeCCCCCchhHHHHhhCCCc
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--T--EFVNSKNCGDKSIIIDMTDGGA 270 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~--~--~vv~~~~~~~~~~i~~~~~g~~ 270 (385)
+...++++++||=+|+|. |..+..+++..+-.+|++++.+++.++.+.+... + ..+..+. ........+ .+.+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~-~~~~~~~~l-~~~~ 142 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA-RKPERYAHV-VEKV 142 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC-CCcchhhhc-cccC
Confidence 346889999999888754 4556667776643389999999877664432211 1 2221111 110000111 2359
Q ss_pred cEEEEccCCh----HHHHHHHHHhccCCceEEEe
Q 016660 271 DYCFECVGLA----SLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 271 d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~ 300 (385)
|+|+.-...+ ..++.+.+.|+++ |+++..
T Consensus 143 D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 143 DVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred CEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 9998544432 2367888999997 998874
No 368
>PRK08328 hypothetical protein; Provisional
Probab=94.85 E-value=0.36 Score=42.98 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
.+.+|+|+|+|++|-.+++.+...|..+++.+|.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 45679999999999999999999999999888743
No 369
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.84 E-value=0.25 Score=43.85 Aligned_cols=36 Identities=31% Similarity=0.335 Sum_probs=28.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE 237 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~ 237 (385)
++.++||.|+ |.+|...+..+...|+ +|+++.++..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCch
Confidence 4568999987 9999999999998999 6755555443
No 370
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.83 E-value=0.37 Score=42.81 Aligned_cols=101 Identities=19% Similarity=0.140 Sum_probs=58.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc-------------------hHHH----HHHHcCCC-eEEeCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-------------------EKFE----IGKRFGVT-EFVNSKNC 256 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~-------------------~~~~----~~~~lg~~-~vv~~~~~ 256 (385)
.+.+|+|+|+|++|..++..+-..|..+++.+|.+. .|.+ .++++... .+-.....
T Consensus 20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~ 99 (228)
T cd00757 20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER 99 (228)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce
Confidence 357899999999999999999999998888885432 1222 22233322 22222221
Q ss_pred CchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEecc
Q 016660 257 GDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 257 ~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
-....+.++.. ++|+||+|...........+.....+-.++..|.
T Consensus 100 i~~~~~~~~~~-~~DvVi~~~d~~~~r~~l~~~~~~~~ip~i~~g~ 144 (228)
T cd00757 100 LDAENAEELIA-GYDLVLDCTDNFATRYLINDACVKLGKPLVSGAV 144 (228)
T ss_pred eCHHHHHHHHh-CCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 11122333322 5999999999887544444444443123444443
No 371
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.83 E-value=0.4 Score=40.65 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=29.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~ 236 (385)
+|+|+|+|++|-..++.+-..|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999899998899998664
No 372
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.26 Score=44.97 Aligned_cols=77 Identities=17% Similarity=0.057 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-EEeCCCCCchhHHHHhh------CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FVNSKNCGDKSIIIDMT------DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-vv~~~~~~~~~~i~~~~------~g 268 (385)
+..++||+|+ |.+|...++.+...|+ +|+++.++.++.+.. +..+... ++.. +......+.++. -+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPL-DVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEC-CCCCHHHHHHHHHHHHHhcC
Confidence 3468999997 9999999998888999 788887766554322 2234332 2211 212222222211 13
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
+.|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999999875
No 373
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.81 E-value=0.25 Score=45.28 Aligned_cols=97 Identities=13% Similarity=0.161 Sum_probs=63.9
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC-Ce--EEeCCCC---CchhHHHHhhCCCccEEE-E
Q 016660 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TE--FVNSKNC---GDKSIIIDMTDGGADYCF-E 275 (385)
Q Consensus 203 ~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~-~~--vv~~~~~---~~~~~i~~~~~g~~d~vi-d 275 (385)
.+|||+|.|. |-.+-.++|+...+++++++.+++=.++++++-. .. ..|++-. ++.....+.+..+||+|| |
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D 156 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD 156 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence 4899997654 5566788888888899999999999999987321 11 0011110 011112222333799985 5
Q ss_pred ccCC---------hHHHHHHHHHhccCCceEEEec
Q 016660 276 CVGL---------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 276 ~~g~---------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
+... .+..+.+.++|+++ |.++.-+
T Consensus 157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~ 190 (282)
T COG0421 157 STDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA 190 (282)
T ss_pred CCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence 4433 46678999999997 9988773
No 374
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.81 E-value=0.42 Score=46.77 Aligned_cols=103 Identities=11% Similarity=0.167 Sum_probs=63.8
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eE--EeCCCCCchhHHHHh-h
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSIIIDM-T 266 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--v~~~~~~~~~~i~~~-~ 266 (385)
...++.++++||=+|+|+ |..++.+++.++-.+|++++.++++++.++ .+|.. .+ .+.+. . ....+ .
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~--~--~~~~~~~ 306 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG--R--GPSQWAE 306 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc--c--ccccccc
Confidence 345678899999888654 444555566554238999999999887654 46664 22 22111 0 01111 1
Q ss_pred CCCccEEE-E--ccCCh-------------------------HHHHHHHHHhccCCceEEEeccC
Q 016660 267 DGGADYCF-E--CVGLA-------------------------SLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 267 ~g~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
.+.||.|| | |+|.. ..+..+++.+++| |++++.-.+
T Consensus 307 ~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs 370 (426)
T TIGR00563 307 NEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS 370 (426)
T ss_pred ccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence 23699986 4 45432 3567789999997 999876443
No 375
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.81 E-value=0.15 Score=44.17 Aligned_cols=98 Identities=12% Similarity=0.137 Sum_probs=58.8
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhhCCCc
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMTDGGA 270 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~~g~~ 270 (385)
......++.+||-+|+|. |..+..+++ .|. .|+++|.+++-.+.+++ .+........+ ... ..+ .+.+
T Consensus 24 ~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d--~~~--~~~-~~~f 95 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPLRTDAYD--INA--AAL-NEDY 95 (195)
T ss_pred HHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCceeEecc--chh--ccc-cCCC
Confidence 334455567899998755 666667776 477 89999999887766543 23221111111 100 011 2369
Q ss_pred cEEEEccC-----C---hHHHHHHHHHhccCCceEEEec
Q 016660 271 DYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 271 d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 301 (385)
|+|+.... . ...++.+.+.|+++ |.++.+.
T Consensus 96 D~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 96 DFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 99976422 1 24577888999997 9865543
No 376
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.24 Score=44.27 Aligned_cols=76 Identities=16% Similarity=0.215 Sum_probs=47.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----c--CCC-eE--EeCCCCCchhH-HHHhh--CC
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EF--VNSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----l--g~~-~v--v~~~~~~~~~~-i~~~~--~g 268 (385)
+.++||.|+ |++|...++.+...|+ +|+.+++++++.+.+.+ . +.. ++ .|..+...... +.+.. -+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999987 9999998888888898 88888888776554322 1 221 22 23333211111 22222 13
Q ss_pred CccEEEEccC
Q 016660 269 GADYCFECVG 278 (385)
Q Consensus 269 ~~d~vid~~g 278 (385)
+.|++|.+.|
T Consensus 81 ~id~vi~~ag 90 (248)
T PRK08251 81 GLDRVIVNAG 90 (248)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 377
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.79 E-value=0.19 Score=45.83 Aligned_cols=78 Identities=15% Similarity=0.236 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCCchHHH----HHHHcCCCeE--EeCCCCCchhH-HHHhhC--C
Q 016660 201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTEF--VNSKNCGDKSI-IIDMTD--G 268 (385)
Q Consensus 201 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~vi~~~~~~~~~~----~~~~lg~~~v--v~~~~~~~~~~-i~~~~~--g 268 (385)
++.++||.|+ + ++|.+.++.+...|+ +|+.++++++..+ +.+++|.... .|..+...... +..... |
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 5678999997 4 899999999989999 7888877643222 2233454322 23333211111 222222 4
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
.+|++++++|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 69999999873
No 378
>PLN02476 O-methyltransferase
Probab=94.78 E-value=0.24 Score=45.22 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=65.5
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHH----HcCCCeEEeCCCCCchhHHHHhh---
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSIIIDMT--- 266 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg~~~vv~~~~~~~~~~i~~~~--- 266 (385)
...+..+..+||=+|.+. |..++.+|+.++- .+|+.++.+++..+.++ +.|..+-+.....+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~ 190 (278)
T PLN02476 112 MLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNG 190 (278)
T ss_pred HHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcc
Confidence 345567788999998633 6667777776631 27999999998887765 45654322222222233333332
Q ss_pred -CCCccEEE-EccCC--hHHHHHHHHHhccCCceEEEe
Q 016660 267 -DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 267 -~g~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~ 300 (385)
.+.||.|| |.--. ...++.+++++++| |.++.=
T Consensus 191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 23799996 44322 34477899999997 887653
No 379
>PRK05717 oxidoreductase; Validated
Probab=94.75 E-value=0.24 Score=44.58 Aligned_cols=78 Identities=18% Similarity=0.246 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcCCCe-E--EeCCCCCchhH-HHHhhC--CCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE-F--VNSKNCGDKSI-IIDMTD--GGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~~~-v--v~~~~~~~~~~-i~~~~~--g~~d~ 272 (385)
++.++||.|+ |.+|..++..+...|+ +|+.++++.++.+. .++++... . .|..+...... +.+... +.+|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999987 9999999998888899 88888777655443 34454321 1 23333111111 222222 35899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9998874
No 380
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.74 E-value=0.14 Score=46.15 Aligned_cols=78 Identities=14% Similarity=0.155 Sum_probs=48.1
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC--eE--EeCCCCCchhH-HHHhhC--CCc
Q 016660 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EF--VNSKNCGDKSI-IIDMTD--GGA 270 (385)
Q Consensus 201 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~v--v~~~~~~~~~~-i~~~~~--g~~ 270 (385)
.+.++||.|++ ++|...++.+...|+ +|+.+.++++..+.++++... .. .|..+...... +..... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57889999874 899999988888999 788887765444444444221 12 23333111111 222221 469
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++++++|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999998873
No 381
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.74 E-value=0.32 Score=44.79 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=29.7
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~ 236 (385)
.++.++||.|+ +++|...++.+...|+ +|+.++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 45789999987 9999999988888999 777776543
No 382
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.73 E-value=0.26 Score=43.99 Aligned_cols=78 Identities=15% Similarity=0.176 Sum_probs=45.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCCch-HHHHH---HHcCCCeE---EeCCCCCchhH-HHHhh--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISE-KFEIG---KRFGVTEF---VNSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~-~~~~~-~~~~~---~~lg~~~v---v~~~~~~~~~~-i~~~~--~g 268 (385)
++.++||+|+ |++|...++.+...|+ +|+.. .+.+. +.+++ ++.+.... .|..+...... +.+.. -+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3578899987 9999999999999999 66664 33332 22222 23454332 23322111111 22211 13
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
+.|++|++.|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 78999999985
No 383
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.73 E-value=0.23 Score=46.35 Aligned_cols=89 Identities=16% Similarity=0.191 Sum_probs=56.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGL 279 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~ 279 (385)
..+.+|.|+|.|.+|...++.++.+|+ +|++.+++.++.. +........+ +.++.. ..|+|+.+.+.
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~~~------l~e~l~-~aDvvv~~lPl 200 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGREE------LSAFLS-QTRVLINLLPN 200 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccccc------HHHHHh-cCCEEEECCCC
Confidence 357899999999999999999999999 8999876544321 2221111111 222222 36888777764
Q ss_pred hHH----H-HHHHHHhccCCceEEEecc
Q 016660 280 ASL----V-QEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 280 ~~~----~-~~~~~~l~~~~G~~v~~g~ 302 (385)
... + ...+..|+++ ..+|.+|-
T Consensus 201 t~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 201 TPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 432 1 2456677776 77777663
No 384
>PLN02256 arogenate dehydrogenase
Probab=94.72 E-value=0.51 Score=43.89 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=61.8
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccE
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADY 272 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~ 272 (385)
+.+...-....+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+.. ..+ . .+......|+
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~--~----~e~~~~~aDv 95 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD--P----DDFCEEHPDV 95 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC--H----HHHhhCCCCE
Confidence 4455555567789999999999999888888887 8888887764 45566677632 111 1 1111124788
Q ss_pred EEEccCChHHHHHHHHH-----hccCCceEEEecc
Q 016660 273 CFECVGLASLVQEAYAC-----CRKGWGKTIVLGV 302 (385)
Q Consensus 273 vid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 302 (385)
||-|+.... ....++. ++++ ..++.++.
T Consensus 96 Vilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 96 VLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred EEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 888887654 3333332 3454 55555554
No 385
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.71 E-value=0.14 Score=42.54 Aligned_cols=77 Identities=26% Similarity=0.217 Sum_probs=46.4
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC--chHHH-H---HHHcCCCeEEeCCCCCchhH----HHHhh--CCC
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFE-I---GKRFGVTEFVNSKNCGDKSI----IIDMT--DGG 269 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~--~~~~~-~---~~~lg~~~vv~~~~~~~~~~----i~~~~--~g~ 269 (385)
+++||+|+ +++|...++.+...|..+|+.+.++ .++.+ + ++..+....+-.-+...... +.... .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 36899987 9999998888877777688888887 33333 2 23345322221112122222 22222 236
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 8999998886
No 386
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.70 E-value=0.28 Score=43.62 Aligned_cols=77 Identities=21% Similarity=0.290 Sum_probs=46.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEE-cCCchHHHHHH----HcCCCeEEeCCCCCchhHHHH----hhC--CC
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGK----RFGVTEFVNSKNCGDKSIIID----MTD--GG 269 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~-~~~~~~~~~~~----~lg~~~vv~~~~~~~~~~i~~----~~~--g~ 269 (385)
+.++||.|+ |.+|...+..+...|+ +|+.+ ++++++.+.+. ..+....+..-+......+.. ... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999987 9999998888888899 67777 77766554322 222221121222122222222 111 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|+||.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 387
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.70 E-value=0.29 Score=45.58 Aligned_cols=78 Identities=22% Similarity=0.300 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc-hHHH-H---HHHcCCCeEEeCCCCCchhHHHHhh-----CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE-I---GKRFGVTEFVNSKNCGDKSIIIDMT-----DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~-~~~~-~---~~~lg~~~vv~~~~~~~~~~i~~~~-----~g~ 269 (385)
++.++||.|+ |++|...++.+...|+ +|+++++.. ++.+ . ++..|....+..-+......+..+. -+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 5678999987 9999999888888899 788876543 2222 2 2233433222222222222221111 247
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 388
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.70 E-value=0.27 Score=43.34 Aligned_cols=93 Identities=22% Similarity=0.306 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe--EEeCCCCCchhHHHHhhC--CCccEEEE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSIIIDMTD--GGADYCFE 275 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~--vv~~~~~~~~~~i~~~~~--g~~d~vid 275 (385)
-++.+||=+|+|+ |+++.-+|+ .|+ +|+++|.+++.++.++.-.... -++|.... +.++.. +.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~----~edl~~~~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQAT----VEDLASAGGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhhh----HHHHHhcCCCccEEEE
Confidence 4788899999865 566666655 467 9999999999999887422211 13454422 333333 37999986
Q ss_pred c-----cCCh-HHHHHHHHHhccCCceEEEe
Q 016660 276 C-----VGLA-SLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 276 ~-----~g~~-~~~~~~~~~l~~~~G~~v~~ 300 (385)
. +..+ ..+..+.++++++ |.++..
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 3 3333 3467899999997 877654
No 389
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.69 E-value=0.25 Score=43.90 Aligned_cols=40 Identities=28% Similarity=0.345 Sum_probs=34.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~ 241 (385)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~ 45 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEK 45 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHH
Confidence 4578999987 9999999999888999 79999888876553
No 390
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.69 E-value=0.38 Score=44.79 Aligned_cols=95 Identities=17% Similarity=0.079 Sum_probs=56.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc-CCCeEEeCCCCCchhHHHHhh---CCCccEEEEccCC
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSIIIDMT---DGGADYCFECVGL 279 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l-g~~~vv~~~~~~~~~~i~~~~---~g~~d~vid~~g~ 279 (385)
+|+|+|+|++|.+....+...|. .|..+++..++.+..++- |.. +.+..+..... +...+ .+.+|+||-|+=+
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~~~~~~-~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQASLYA-IPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCcceeec-cCCCCcccccccCEEEEECCH
Confidence 59999999999887777777888 788888877777766542 431 22111100000 00111 1268999988765
Q ss_pred hH---HHHHHHHHhccCCceEEEecc
Q 016660 280 AS---LVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 280 ~~---~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.. +++.+...+.++ ..++.+-+
T Consensus 81 ~~~~~al~~l~~~l~~~-t~vv~lQN 105 (305)
T PRK05708 81 YDAEPAVASLAHRLAPG-AELLLLQN 105 (305)
T ss_pred HhHHHHHHHHHhhCCCC-CEEEEEeC
Confidence 43 234444556665 66666543
No 391
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.69 E-value=0.25 Score=50.84 Aligned_cols=78 Identities=17% Similarity=0.263 Sum_probs=58.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 202 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 202 ~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
.+.|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|.+.++ -+. ...+.+++..-..+|.++-++++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa-t~~~~L~~agi~~A~~vvv~~~d~~ 476 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA-TRMDLLESAGAAKAEVLINAIDDPQ 476 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC-CCHHHHHhcCCCcCCEEEEEeCCHH
Confidence 3679999999999999999999999 899999999999999998865332 222 2222233322227999999998876
Q ss_pred H
Q 016660 282 L 282 (385)
Q Consensus 282 ~ 282 (385)
.
T Consensus 477 ~ 477 (621)
T PRK03562 477 T 477 (621)
T ss_pred H
Confidence 3
No 392
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.69 E-value=0.25 Score=44.51 Aligned_cols=38 Identities=26% Similarity=0.338 Sum_probs=31.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 240 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~ 240 (385)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++.+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~ 40 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAA 40 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 468999987 9999999998888899 8888888766544
No 393
>PLN00203 glutamyl-tRNA reductase
Probab=94.69 E-value=0.13 Score=51.41 Aligned_cols=74 Identities=18% Similarity=0.308 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcC-CCe-EEeCCCCCchhHHHHhhCCCccEEEEcc
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VTE-FVNSKNCGDKSIIIDMTDGGADYCFECV 277 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg-~~~-vv~~~~~~~~~~i~~~~~g~~d~vid~~ 277 (385)
.+.+|+|+|+|.+|.++++.+...|+++|+++.++.++.+.+. +++ ... +....+ ..... ...|+||.|+
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~d------l~~al-~~aDVVIsAT 337 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDE------MLACA-AEADVVFTST 337 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhh------HHHHH-hcCCEEEEcc
Confidence 3688999999999999999999999878999999988876544 453 221 112111 11221 2689999998
Q ss_pred CChH
Q 016660 278 GLAS 281 (385)
Q Consensus 278 g~~~ 281 (385)
+.+.
T Consensus 338 ~s~~ 341 (519)
T PLN00203 338 SSET 341 (519)
T ss_pred CCCC
Confidence 7654
No 394
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=94.64 E-value=0.23 Score=43.68 Aligned_cols=79 Identities=20% Similarity=0.175 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc----------hHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS----------EKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGG 269 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~----------~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~ 269 (385)
-.+.+|+|.|.|.+|..+++++...|.+.|.+++++. +..+..++.+....+...+......+. .-.
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~~~~~~~~l~---~~~ 97 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQDYFPGEAIL---GLD 97 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcccccCcccce---ecc
Confidence 4688999999999999999999999996666677766 666666555432221110100001111 115
Q ss_pred ccEEEEccCChH
Q 016660 270 ADYCFECVGLAS 281 (385)
Q Consensus 270 ~d~vid~~g~~~ 281 (385)
.|+++.|+....
T Consensus 98 ~DVlipaA~~~~ 109 (217)
T cd05211 98 VDIFAPCALGNV 109 (217)
T ss_pred ccEEeeccccCc
Confidence 788888887654
No 395
>PRK06484 short chain dehydrogenase; Validated
Probab=94.62 E-value=0.2 Score=50.31 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH-HHHcCCCe---EEeCCCCCchhH-HHHhh--CCCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTE---FVNSKNCGDKSI-IIDMT--DGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~~~---vv~~~~~~~~~~-i~~~~--~g~~d~ 272 (385)
++.++||+|+ +++|...++.+...|+ +|+.++++.++.+. .++++... .+|..+...... +.... -+++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5678999987 9999999999999999 89999888777654 34455432 233333211111 22221 136999
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999874
No 396
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.59 E-value=0.5 Score=43.18 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC--------CeEEeCCCCCchhHHHHhhCCCccE
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--------TEFVNSKNCGDKSIIIDMTDGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~--------~~vv~~~~~~~~~~i~~~~~g~~d~ 272 (385)
...+||++|+|. |..+..+++.....++++++.+++-.+.+++.-. ..+ +....+....+. ...+.||+
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v-~i~~~D~~~~l~-~~~~~yDv 148 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRV-DLQIDDGFKFLA-DTENTFDV 148 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCce-EEEECchHHHHH-hCCCCccE
Confidence 445999998865 4456667776656689999998887777765310 111 100111111122 22347999
Q ss_pred EEE-cc---C------ChHHHHHHHHHhccCCceEEEec
Q 016660 273 CFE-CV---G------LASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 273 vid-~~---g------~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
||- .. + ..+.++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 864 32 1 234467889999997 9998764
No 397
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.59 E-value=0.24 Score=44.77 Aligned_cols=78 Identities=15% Similarity=0.326 Sum_probs=47.2
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHcCCCEEEEEcCCchHHH----HHHHcCCCeEE--eCCCCCchhH-HHHhhC--C
Q 016660 201 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTEFV--NSKNCGDKSI-IIDMTD--G 268 (385)
Q Consensus 201 ~~~~VlI~G~g---~vG~~ai~la~~~G~~~vi~~~~~~~~~~----~~~~lg~~~vv--~~~~~~~~~~-i~~~~~--g 268 (385)
++.++||.|++ ++|...++.+...|+ +|+.++++++..+ ..++++...++ |..+...... +..... |
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 46889999863 899999988888999 7888877654322 22334432232 3222111111 222211 4
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
.+|++|+++|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 68999998873
No 398
>PRK06483 dihydromonapterin reductase; Provisional
Probab=94.58 E-value=0.22 Score=44.11 Aligned_cols=77 Identities=16% Similarity=0.070 Sum_probs=48.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchH-HHHHHHcCCCe-EEeCCCCCchhH-HHHhhC--CCccEEEE
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEIGKRFGVTE-FVNSKNCGDKSI-IIDMTD--GGADYCFE 275 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~-~~~~~~lg~~~-vv~~~~~~~~~~-i~~~~~--g~~d~vid 275 (385)
+.++||.|+ |++|...++.+...|+ +|+.++++++. .+.+++.++.. ..|..+...... +..... +++|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 457999987 9999999999888999 88888876643 33344455432 133333222111 222222 35899999
Q ss_pred ccCC
Q 016660 276 CVGL 279 (385)
Q Consensus 276 ~~g~ 279 (385)
+.|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 8874
No 399
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.57 E-value=0.49 Score=42.73 Aligned_cols=97 Identities=22% Similarity=0.150 Sum_probs=67.0
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhh-CCCc
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMT-DGGA 270 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~-G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~-~g~~ 270 (385)
+.......++.+||=+|+|. |.++..+++.. +. +|++++.++.-.+.+++.+.+.+ ..+ +..+. .+.|
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~-~~d-------~~~~~~~~~f 90 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDAR-TGD-------VRDWKPKPDT 90 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEE-EcC-------hhhCCCCCCc
Confidence 33445667889999999866 67777888765 55 89999999998888877654422 111 11222 2379
Q ss_pred cEEEEccC-----C-hHHHHHHHHHhccCCceEEEe
Q 016660 271 DYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 271 d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 300 (385)
|+|+-... . ...++.+.+.|+++ |.++..
T Consensus 91 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 91 DVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred eEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 99986442 2 34577889999997 998764
No 400
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.54 E-value=0.27 Score=49.97 Aligned_cols=76 Identities=11% Similarity=0.202 Sum_probs=56.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 203 ~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
+.++|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+. -+. ...+.+++..-+.+|.++-++++..
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~-GD~-~~~~~L~~a~i~~a~~viv~~~~~~ 493 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVL-GNA-ANEEIMQLAHLDCARWLLLTIPNGY 493 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEE-cCC-CCHHHHHhcCccccCEEEEEcCChH
Confidence 678999999999999999999998 899999999999999988865443 222 2222233322227898887776654
No 401
>PRK11579 putative oxidoreductase; Provisional
Probab=94.54 E-value=0.52 Score=44.74 Aligned_cols=126 Identities=16% Similarity=0.107 Sum_probs=74.2
Q ss_pred EEEEEcCCHHHH-HHHHHHH-HcCCCEEEE-EcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCC
Q 016660 204 TVVIFGLGSIGL-AVAEGAR-LCGATRIIG-VDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGL 279 (385)
Q Consensus 204 ~VlI~G~g~vG~-~ai~la~-~~G~~~vi~-~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 279 (385)
+|.|+|.|.+|. ..+...+ .-++ ++++ .++++++.+ .+++...++ .+ ..++... .+|+|+-|++.
T Consensus 6 rvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~--~~------~~ell~~~~vD~V~I~tp~ 74 (346)
T PRK11579 6 RVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKVK--ADWPTVTVV--SE------PQHLFNDPNIDLIVIPTPN 74 (346)
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHHH--hhCCCCcee--CC------HHHHhcCCCCCEEEEcCCc
Confidence 689999999996 4455444 4577 5555 444444332 344332222 22 3344444 79999999998
Q ss_pred hHHHHHHHHHhccCCceEEEeccCCCCCcccccHH---HH---hh-cCcEEEEeeecCCCCCCcHHHHHHHHHcCCC
Q 016660 280 ASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSF---EV---LH-SGKILMGSLFGGLKAKSDIPILLKRYMDKEL 349 (385)
Q Consensus 280 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~---~~---~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 349 (385)
....+.+..++.. |+-|++-.. +..+.. .+ .. ++..+.-. ........+..+-+++++|.+
T Consensus 75 ~~H~~~~~~al~a--GkhVl~EKP-----la~t~~ea~~l~~~a~~~g~~l~v~--~~~R~~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 75 DTHFPLAKAALEA--GKHVVVDKP-----FTVTLSQARELDALAKSAGRVLSVF--HNRRWDSDFLTLKALLAEGVL 142 (346)
T ss_pred HHHHHHHHHHHHC--CCeEEEeCC-----CCCCHHHHHHHHHHHHHhCCEEEEE--eeccCCHHHHHHHHHHhcCCC
Confidence 8878899999988 566666432 222221 11 12 34444322 223334567888888888755
No 402
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.29 Score=45.54 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
.+.++||.|+ +++|..+++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4678999987 9999999999999999 78888776
No 403
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.50 E-value=0.17 Score=47.04 Aligned_cols=102 Identities=12% Similarity=0.058 Sum_probs=66.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCCchHHHH-HHHcCCC--eEEeCCCCCchhHHHHhhCCCccEEEE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEI-GKRFGVT--EFVNSKNCGDKSIIIDMTDGGADYCFE 275 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~-~~G~~~vi~~~~~~~~~~~-~~~lg~~--~vv~~~~~~~~~~i~~~~~g~~d~vid 275 (385)
....+++|+|+|..|.+.++.+. ..+.++|.+.++++++.+. +.++... .+. ..+ . .+.. .++|+|+.
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~--~----~~av-~~aDiVit 194 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLD--G----EAIP-EAVDLVVT 194 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECC--H----HHHh-hcCCEEEE
Confidence 45678999999999999888886 5788899999999887654 4444321 111 111 1 1111 26999999
Q ss_pred ccCChHHHHHHHHHhccCCceEEEeccCCCCCcccccH
Q 016660 276 CVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 313 (385)
Q Consensus 276 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~ 313 (385)
|+++++.+-..+ ++++ -.+..+|...+ ..-+++.
T Consensus 195 aT~s~~Pl~~~~--~~~g-~hi~~iGs~~p-~~~El~~ 228 (304)
T PRK07340 195 ATTSRTPVYPEA--ARAG-RLVVAVGAFTP-DMAELAP 228 (304)
T ss_pred ccCCCCceeCcc--CCCC-CEEEecCCCCC-CcccCCH
Confidence 998775443333 6886 78888887542 3334443
No 404
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.49 E-value=0.45 Score=39.21 Aligned_cols=92 Identities=17% Similarity=0.212 Sum_probs=62.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhH-------HHHhhCC-CccEE
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSI-------IIDMTDG-GADYC 273 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~-------i~~~~~g-~~d~v 273 (385)
.+|+|+|+ |.+|.+.++..|..++ -|.-++.++... .....+++.++ ++-++ +.....+ ++|.|
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~-swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNK-SWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCc-chhHHHHHHHHHHHHhhcccccceE
Confidence 46999988 9999999999999999 888887654422 22334555444 33322 3344556 89999
Q ss_pred EEccCCh--------------------------HHHHHHHHHhccCCceEEEecc
Q 016660 274 FECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 274 id~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
|...|+= ...+.+...|+++ |-+-+.|.
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA 130 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA 130 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence 9877650 1123455678897 88877764
No 405
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=94.49 E-value=0.15 Score=45.02 Aligned_cols=71 Identities=18% Similarity=0.223 Sum_probs=49.0
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCe-EEeCCCCCchhHHHHhhCC-CccEEEEccCC
Q 016660 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-FVNSKNCGDKSIIIDMTDG-GADYCFECVGL 279 (385)
Q Consensus 205 VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~-vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 279 (385)
|||+|+ |-+|..++..+...|. .|+++.+++........ ..... ..|.. ....+.+.... .+|.||++++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~---~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLT---DKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETT---SHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecc---ccccccccccccCceEEEEeecc
Confidence 789997 9999999999999999 77777776665554433 23221 12332 23335555555 79999999986
No 406
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.49 E-value=0.3 Score=47.33 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCC-eE--EeCCCCCchhHHHHhhCCCccEEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EF--VNSKNCGDKSIIIDMTDGGADYCFE 275 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~-~v--v~~~~~~~~~~i~~~~~g~~d~vid 275 (385)
++.+++|.|+ |++|...++.+...|+ +|+++++++++.+... ..+.. .. .|..+ .+.+.+.. +++|++|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd---~~~v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ---EAALAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC---HHHHHHHh-CCCCEEEE
Confidence 4678999997 9999999998888999 8888887766553321 11111 12 23322 22233333 36999999
Q ss_pred ccCC
Q 016660 276 CVGL 279 (385)
Q Consensus 276 ~~g~ 279 (385)
+.|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 8764
No 407
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.48 E-value=1.2 Score=40.55 Aligned_cols=102 Identities=15% Similarity=0.192 Sum_probs=62.3
Q ss_pred ccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHH----HcCCCeEEeCCCCCchhHHHHhhCCCcc
Q 016660 197 ANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSIIIDMTDGGAD 271 (385)
Q Consensus 197 ~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~----~lg~~~vv~~~~~~~~~~i~~~~~g~~d 271 (385)
..++++++||=.|+|+ |..++.++..++ ...|++++.++++.+.++ .+|...+.-... +...... ..+.||
T Consensus 67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~--D~~~~~~-~~~~fD 142 (264)
T TIGR00446 67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF--DGRVFGA-AVPKFD 142 (264)
T ss_pred hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC--CHHHhhh-hccCCC
Confidence 4678899988888755 445555565543 238999999999987664 466654321111 1111111 123599
Q ss_pred EEE-E--ccCC-------------------------hHHHHHHHHHhccCCceEEEeccC
Q 016660 272 YCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 272 ~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
.|+ | |+|. ...+..++++++++ |++++...+
T Consensus 143 ~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstcs 201 (264)
T TIGR00446 143 AILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTCS 201 (264)
T ss_pred EEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeCC
Confidence 886 4 4443 12467788899997 998866443
No 408
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.47 E-value=0.22 Score=48.16 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=50.6
Q ss_pred cCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHH-------HHHHc-CCCeE-EeCCCCCchhHHHHhhC
Q 016660 198 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSIIIDMTD 267 (385)
Q Consensus 198 ~~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~-------~~~~l-g~~~v-v~~~~~~~~~~i~~~~~ 267 (385)
+-..+.+|||+|+ |.+|..+++.+...|+ +|+++.++.++.+ ..... ++..+ .|..+ ...+.....
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d---~~~l~~~~~ 131 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD---ADSLRKVLF 131 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC---HHHHHHHHH
Confidence 4456788999987 9999999999988999 8888888765421 11112 23222 23333 222333333
Q ss_pred C---CccEEEEccCC
Q 016660 268 G---GADYCFECVGL 279 (385)
Q Consensus 268 g---~~d~vid~~g~ 279 (385)
+ ++|+||+|.+.
T Consensus 132 ~~~~~~D~Vi~~aa~ 146 (390)
T PLN02657 132 SEGDPVDVVVSCLAS 146 (390)
T ss_pred HhCCCCcEEEECCcc
Confidence 2 69999998864
No 409
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.47 E-value=0.38 Score=42.93 Aligned_cols=105 Identities=16% Similarity=0.192 Sum_probs=64.7
Q ss_pred hhhccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhh--
Q 016660 194 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMT-- 266 (385)
Q Consensus 194 ~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~-- 266 (385)
....+..+..+||=+|.|. |..++.+++.++ ..+|++++.+++..+.+++ .|...-+.....+..+.+..+.
T Consensus 61 ~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~ 139 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNN 139 (234)
T ss_pred HHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhC
Confidence 3445667788999998743 666666776553 3389999999988877654 4543212222212222233332
Q ss_pred --CCCccEEEEccC---ChHHHHHHHHHhccCCceEEEe
Q 016660 267 --DGGADYCFECVG---LASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 267 --~g~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
.+.||+||--.. -...++.+++++++| |.++.-
T Consensus 140 ~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 140 DPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 237999974332 234577889999997 877653
No 410
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.46 E-value=0.18 Score=46.03 Aligned_cols=79 Identities=20% Similarity=0.204 Sum_probs=52.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCC------eEEeCCCCCchhH----HHH
Q 016660 200 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNCGDKSI----IID 264 (385)
Q Consensus 200 ~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~------~vv~~~~~~~~~~----i~~ 264 (385)
-.+.++||.|+ .++|.+.+..+...|+ +|+.+++++++.+...+ .+.. .+.|..+...... ..+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46788899987 9999999999999999 89999898887655432 2221 2334443222222 122
Q ss_pred hhCCCccEEEEccCC
Q 016660 265 MTDGGADYCFECVGL 279 (385)
Q Consensus 265 ~~~g~~d~vid~~g~ 279 (385)
...|+.|++++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 224579999998775
No 411
>PRK07024 short chain dehydrogenase; Provisional
Probab=94.46 E-value=0.17 Score=45.69 Aligned_cols=77 Identities=18% Similarity=0.177 Sum_probs=48.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCC--C-eE--EeCCCCCchhH-HHHhh--CCCcc
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV--T-EF--VNSKNCGDKSI-IIDMT--DGGAD 271 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~--~-~v--v~~~~~~~~~~-i~~~~--~g~~d 271 (385)
+.+|||+|+ |++|...++.+...|+ +|+.+++++++.+...+ +.. + .. +|..+...... +.... .+.+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 357999987 9999999998888899 89999888777654332 221 1 11 23333111111 22222 13589
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
++|+++|.
T Consensus 81 ~lv~~ag~ 88 (257)
T PRK07024 81 VVIANAGI 88 (257)
T ss_pred EEEECCCc
Confidence 99998873
No 412
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.45 E-value=0.32 Score=43.68 Aligned_cols=78 Identities=18% Similarity=0.127 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
.+.+|||.|+ |++|...+..+...|+ +|+.++++.++.+.+ ++.+.+ ++ .|..+...... +.... -++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4788999987 9999999998888999 788887776655432 223332 12 23333111111 22221 136
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|.+.|.
T Consensus 89 ~d~li~~ag~ 98 (255)
T PRK06113 89 VDILVNNAGG 98 (255)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 413
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.45 E-value=0.36 Score=43.93 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=66.7
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC--CeE-EeCCCCCchhHHHHhhCCC
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEF-VNSKNCGDKSIIIDMTDGG 269 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~--~~v-v~~~~~~~~~~i~~~~~g~ 269 (385)
+....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++... ..+ +...+ ... ..+.++.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~ 117 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT 117 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence 44566788999999998764 5556677777787 89999999888887776322 111 11111 100 0111236
Q ss_pred ccEEEEc--c---C---ChHHHHHHHHHhccCCceEEEecc
Q 016660 270 ADYCFEC--V---G---LASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 270 ~d~vid~--~---g---~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
||+|+.. . + -...++.+.+.|+++ |+++....
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9999852 1 1 134577889999997 99987654
No 414
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.34 Score=44.73 Aligned_cols=37 Identities=32% Similarity=0.144 Sum_probs=30.3
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Q 016660 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (385)
Q Consensus 199 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~ 236 (385)
..++.++||.|+ |.+|...+..+...|+ +|+.+.+++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~ 80 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDE 80 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 345788999997 9999998888888899 788776654
No 415
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.41 E-value=0.52 Score=40.94 Aligned_cols=35 Identities=37% Similarity=0.441 Sum_probs=31.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45679999999999999999999999889999876
No 416
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.40 E-value=0.3 Score=43.92 Aligned_cols=77 Identities=18% Similarity=0.277 Sum_probs=48.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCC--eE--EeCCCCCchhH-HHHhh--CCCccE
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EF--VNSKNCGDKSI-IIDMT--DGGADY 272 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~--~v--v~~~~~~~~~~-i~~~~--~g~~d~ 272 (385)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ +.+... ++ .|..+...... +.... -+++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 9999998888888898 788888887765543 333211 12 23333111111 11111 136899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9999974
No 417
>PLN03139 formate dehydrogenase; Provisional
Probab=94.39 E-value=0.2 Score=48.14 Aligned_cols=90 Identities=20% Similarity=0.159 Sum_probs=57.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGL 279 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~ 279 (385)
-.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..+++|+..+ .+ +.++.. ..|+|+-+.+.
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~---~~------l~ell~-~sDvV~l~lPl 265 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE---ED------LDAMLP-KCDVVVINTPL 265 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec---CC------HHHHHh-hCCEEEEeCCC
Confidence 367899999999999999999999999 89999876544444445554321 11 122221 25777666653
Q ss_pred hH-H---H-HHHHHHhccCCceEEEec
Q 016660 280 AS-L---V-QEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 280 ~~-~---~-~~~~~~l~~~~G~~v~~g 301 (385)
.. + + .+.+..|+++ ..+|.++
T Consensus 266 t~~T~~li~~~~l~~mk~g-a~lIN~a 291 (386)
T PLN03139 266 TEKTRGMFNKERIAKMKKG-VLIVNNA 291 (386)
T ss_pred CHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence 21 1 1 2456667775 6666555
No 418
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.35 E-value=0.2 Score=45.03 Aligned_cols=78 Identities=21% Similarity=0.134 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-CchHHHHHHHcCCCe-EEeCCCCCchhH-HHHhh--CCCccEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIGKRFGVTE-FVNSKNCGDKSI-IIDMT--DGGADYCF 274 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~-~~~~~~~~~~lg~~~-vv~~~~~~~~~~-i~~~~--~g~~d~vi 274 (385)
.+.++||.|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+... ..|..+...... +.... -+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 9999999999988999 6766543 334444444334322 123333211111 22221 13689999
Q ss_pred EccCC
Q 016660 275 ECVGL 279 (385)
Q Consensus 275 d~~g~ 279 (385)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99875
No 419
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.35 E-value=0.38 Score=44.14 Aligned_cols=77 Identities=17% Similarity=0.236 Sum_probs=55.3
Q ss_pred CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEcc
Q 016660 199 VEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECV 277 (385)
Q Consensus 199 ~~~~~~VlI~G~g~-vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~ 277 (385)
--+|.+|+|+|.|+ +|...++++...|+ +|+++.+..+. +. +.+ ..+|+||.++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~--L~---------------------~~~-~~aDIvI~At 210 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN--LP---------------------ELV-KQADIIVGAV 210 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh--HH---------------------HHh-ccCCEEEEcc
Confidence 35788999999976 99999999999999 88888652111 11 111 2589999999
Q ss_pred CChHHHHHHHHHhccCCceEEEeccC
Q 016660 278 GLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 278 g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
|.+..+. .+.++++ ..++.+|..
T Consensus 211 G~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 211 GKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred CCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 8776333 3568886 777778754
No 420
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.35 E-value=0.085 Score=47.93 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=48.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe-EEeCCCCCchhH-HHHhh--CCCccEEEEc
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSI-IIDMT--DGGADYCFEC 276 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~-vv~~~~~~~~~~-i~~~~--~g~~d~vid~ 276 (385)
+.+++|.|+ |++|...++.+...|+ +|++++++.++.+.. .+... ..|..+...... +.... .+.+|++|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 567999987 9999999998888899 799998876554322 12221 234433222111 22221 2368999999
Q ss_pred cCC
Q 016660 277 VGL 279 (385)
Q Consensus 277 ~g~ 279 (385)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 985
No 421
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.35 E-value=0.3 Score=50.03 Aligned_cols=94 Identities=10% Similarity=0.072 Sum_probs=65.6
Q ss_pred CEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHH
Q 016660 203 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASL 282 (385)
Q Consensus 203 ~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~ 282 (385)
+.|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++ -+. ...+.+++..-..+|.++-+.++.+.
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa-t~~~~L~~agi~~A~~vv~~~~d~~~ 477 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA-TQLELLRAAGAEKAEAIVITCNEPED 477 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC-CCHHHHHhcCCccCCEEEEEeCCHHH
Confidence 579999999999999999999999 899999999999999998865433 222 22322333222279999999998763
Q ss_pred HHHHH---HHhccCCceEEEe
Q 016660 283 VQEAY---ACCRKGWGKTIVL 300 (385)
Q Consensus 283 ~~~~~---~~l~~~~G~~v~~ 300 (385)
-.... +...+. .+++.-
T Consensus 478 n~~i~~~~r~~~p~-~~IiaR 497 (601)
T PRK03659 478 TMKIVELCQQHFPH-LHILAR 497 (601)
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 32333 333443 455543
No 422
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.35 E-value=0.9 Score=38.83 Aligned_cols=97 Identities=16% Similarity=0.253 Sum_probs=62.3
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCe--EEeCCCCCchhHHHHhhCC
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~--vv~~~~~~~~~~i~~~~~g 268 (385)
....+.++.+||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. + . .....+
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-d--~----~~~~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-E--A----PIELPG 96 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-C--c----hhhcCc
Confidence 445667888999888765 6677777776532389999999887776653 44322 2221 1 1 111123
Q ss_pred CccEEEEccC---ChHHHHHHHHHhccCCceEEEe
Q 016660 269 GADYCFECVG---LASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 269 ~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
.+|+|+.... -...++.+.+.|+++ |+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 6999985432 123467889999997 988764
No 423
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.33 E-value=0.47 Score=42.91 Aligned_cols=93 Identities=23% Similarity=0.285 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc----CCC---eEEeCCCCCchhHHHHhhCCCccE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT---EFVNSKNCGDKSIIIDMTDGGADY 272 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l----g~~---~vv~~~~~~~~~~i~~~~~g~~d~ 272 (385)
.++.+||=+|+|. |..+..+++. |. +|++++.+++.++.+++. |.. .++.. + ...+.....+.||+
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d---~~~l~~~~~~~fD~ 115 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-A---AQDIAQHLETPVDL 115 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-C---HHHHhhhcCCCCCE
Confidence 4567888888765 7778888875 77 899999999988877653 321 12211 1 11122223347999
Q ss_pred EEEcc-----CC-hHHHHHHHHHhccCCceEEEe
Q 016660 273 CFECV-----GL-ASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 273 vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 300 (385)
|+... .. ...++.+.+.|+++ |.++.+
T Consensus 116 V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 116 ILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred EEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 98432 22 24478899999997 998755
No 424
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.33 Score=44.28 Aligned_cols=77 Identities=14% Similarity=0.116 Sum_probs=48.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCC--C-eE--EeCCCCCchhHHHHhhC--CC
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV--T-EF--VNSKNCGDKSIIIDMTD--GG 269 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~--~-~v--v~~~~~~~~~~i~~~~~--g~ 269 (385)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+... ..+. . ++ .|..+......+.+... ++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 567999997 9999999998888899 8888888776654432 2221 1 12 23333211111222211 36
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|+++.+.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
No 425
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.32 E-value=0.18 Score=46.02 Aligned_cols=70 Identities=21% Similarity=0.127 Sum_probs=50.5
Q ss_pred cCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCCeEEeCCCCCchhHHHHhhCCCccEEEEc
Q 016660 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSIIIDMTDGGADYCFEC 276 (385)
Q Consensus 198 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~ 276 (385)
+...+.+++|+|+|+.+.+++..++..|+++|+++.++++|.+.+. .++.. ..+ ......+|+||+|
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~~~--------~~~~~~~dlvINa 185 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----WRP--------DLGGIEADILVNV 185 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----chh--------hcccccCCEEEEC
Confidence 4445668999999999999999999999988999999988877554 34311 100 0111258999999
Q ss_pred cCC
Q 016660 277 VGL 279 (385)
Q Consensus 277 ~g~ 279 (385)
++.
T Consensus 186 Tp~ 188 (272)
T PRK12550 186 TPI 188 (272)
T ss_pred Ccc
Confidence 864
No 426
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.31 E-value=0.89 Score=40.68 Aligned_cols=37 Identities=24% Similarity=0.193 Sum_probs=29.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CCchH
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEK 238 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~-~~~~~ 238 (385)
.+.++||.|+ |++|...++.+...|+ +|+.+. +.+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~ 41 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEE 41 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHH
Confidence 4678999987 9999999999999999 677653 34343
No 427
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=94.29 E-value=0.13 Score=45.78 Aligned_cols=105 Identities=24% Similarity=0.451 Sum_probs=62.2
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHH----cCCCeE--EeCCCCCchhHHHHhhC
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSIIIDMTD 267 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~----lg~~~v--v~~~~~~~~~~i~~~~~ 267 (385)
+....+++++||=+|+|. |.++..+++..+. .+|+++|.+++-++.+++ .+...+ +..+. .. ..+.+
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da-~~----lp~~d 114 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA-ED----LPFPD 114 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT-TB------S-T
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH-HH----hcCCC
Confidence 445678899999997755 6788888887753 289999999998887764 333222 21111 11 11223
Q ss_pred CCccEEEEccCC------hHHHHHHHHHhccCCceEEEeccCCCC
Q 016660 268 GGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQPG 306 (385)
Q Consensus 268 g~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~~ 306 (385)
+.||+|.-+.|- ...+.++.+.|++| |+++.+....+.
T Consensus 115 ~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~ 158 (233)
T PF01209_consen 115 NSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPR 158 (233)
T ss_dssp T-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-S
T ss_pred CceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCC
Confidence 369999876653 35588999999997 999887765433
No 428
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.28 E-value=0.3 Score=44.89 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=49.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
+|.|+|.|.+|...+..++..|. .|++.++++++.+.+.+.|...... . .. +. -...|+||-|+....
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~--~--~~----~~-~~~aDlVilavp~~~ 69 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS--T--DL----SL-LKDCDLVILALPIGL 69 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc--C--CH----hH-hcCCCEEEEcCCHHH
Confidence 58899999999988888888898 8999999998888888877421110 0 11 11 125799999988665
No 429
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.26 E-value=0.37 Score=43.22 Aligned_cols=76 Identities=17% Similarity=0.254 Sum_probs=45.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch-HH-HH---HHHcCCC-eE--EeCCCCCchhH-HHHhhC--CCc
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KF-EI---GKRFGVT-EF--VNSKNCGDKSI-IIDMTD--GGA 270 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~-~~-~~---~~~lg~~-~v--v~~~~~~~~~~-i~~~~~--g~~ 270 (385)
.++||.|+ |.+|...+..+...|+ +|+.+++... .. +. ++..+.. .+ .|..+...... +..... +.+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57899987 9999999999888999 7888876532 22 12 2223332 22 23333111111 222221 368
Q ss_pred cEEEEccCC
Q 016660 271 DYCFECVGL 279 (385)
Q Consensus 271 d~vid~~g~ 279 (385)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (256)
T PRK12745 82 DCLVNNAGV 90 (256)
T ss_pred CEEEECCcc
Confidence 999999874
No 430
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.26 E-value=0.59 Score=44.53 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=31.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCc
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 236 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~ 236 (385)
.+.+|||+|+|++|-.+++.+-..|+++++.+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 457899999999999999999999999999997653
No 431
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.26 E-value=0.39 Score=47.80 Aligned_cols=71 Identities=27% Similarity=0.258 Sum_probs=49.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch-----HHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCF 274 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~-----~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vi 274 (385)
..+.+|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|+....+.... ....+|+|+
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~---------~~~~~D~Vv 83 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT---------LPEDTDLVV 83 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc---------ccCCCCEEE
Confidence 346789999999999999999999999 7988875542 2344666776544332220 012578888
Q ss_pred EccCCh
Q 016660 275 ECVGLA 280 (385)
Q Consensus 275 d~~g~~ 280 (385)
-+.|-+
T Consensus 84 ~s~Gi~ 89 (480)
T PRK01438 84 TSPGWR 89 (480)
T ss_pred ECCCcC
Confidence 887764
No 432
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.24 E-value=0.4 Score=44.23 Aligned_cols=93 Identities=18% Similarity=0.264 Sum_probs=65.0
Q ss_pred ccccchhhhhhhhhhhccC-CCCCEEEEEc-CCHHHHHHHHHHHHcCCCEEEEEc-CCchHHHHHHHcCCCeEEeCCCCC
Q 016660 181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNCG 257 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~~~-~~~~~VlI~G-~g~vG~~ai~la~~~G~~~vi~~~-~~~~~~~~~~~lg~~~vv~~~~~~ 257 (385)
.+||.....+. +.+..++ -.|.+|+|+| .+.+|.-.+.++...|+ .|++.. ++.+
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~-------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD-------------------- 194 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence 45655444443 3344343 5799999999 59999999999999999 888884 3321
Q ss_pred chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccC
Q 016660 258 DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 258 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+.+.+. ..|+|+-++|.+..+...+ +++| ..++.+|..
T Consensus 195 ----l~e~~~-~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 195 ----LPAVCR-RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred ----HHHHHh-cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 111111 3799999999998666655 8886 888888864
No 433
>PLN02735 carbamoyl-phosphate synthase
Probab=94.24 E-value=0.7 Score=50.73 Aligned_cols=98 Identities=12% Similarity=0.134 Sum_probs=59.8
Q ss_pred chhhhhhhhhhhccCCCCCEEEEEcCCHH-----------HHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEE-e
Q 016660 185 GVSTGVGAAWRTANVEVGSTVVIFGLGSI-----------GLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-N 252 (385)
Q Consensus 185 ~~~ta~~al~~~~~~~~~~~VlI~G~g~v-----------G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv-~ 252 (385)
....||.+......-..-.+|||+|+|++ |..++..++..|+ .|+.+++++........+ +++++ .
T Consensus 6 ~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi~ 83 (1102)
T PLN02735 6 TVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYIA 83 (1102)
T ss_pred cceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEeC
Confidence 34456665433322233468999998874 5568888899999 899998877542211222 44432 2
Q ss_pred CCCCCchhHHHHhhCC-CccEEEEccCChHHHHHHH
Q 016660 253 SKNCGDKSIIIDMTDG-GADYCFECVGLASLVQEAY 287 (385)
Q Consensus 253 ~~~~~~~~~i~~~~~g-~~d~vid~~g~~~~~~~~~ 287 (385)
+. ....+.+.... ++|.|+-+.|+...++.+.
T Consensus 84 p~---~~e~v~~ii~~e~~D~Iip~~gg~~gl~la~ 116 (1102)
T PLN02735 84 PM---TPELVEQVIAKERPDALLPTMGGQTALNLAV 116 (1102)
T ss_pred CC---CHHHHHHHHHHhCCCEEEECCCchhhHHHHH
Confidence 22 22334444444 8999999988877555443
No 434
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.32 Score=43.29 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=32.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHH
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 241 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~ 241 (385)
.+++|.|+ |++|...++.+...|+ +|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 47899987 9999999999988999 89999888876543
No 435
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.22 E-value=0.34 Score=43.69 Aligned_cols=75 Identities=23% Similarity=0.203 Sum_probs=47.3
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCCeEE--eCCCCCchhH-HHHhh--CCCccEE
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFV--NSKNCGDKSI-IIDMT--DGGADYC 273 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~vv--~~~~~~~~~~-i~~~~--~g~~d~v 273 (385)
++||.|+ +++|...++.+...|+ +|+.+++++++.+.+. +.+..+.+ |..+...... +.... .+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5899987 9999999999888999 8999988877654332 22322222 3333111111 22221 2369999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
|++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 998874
No 436
>PRK09135 pteridine reductase; Provisional
Probab=94.21 E-value=0.44 Score=42.37 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=29.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 236 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~ 236 (385)
.+.++||.|+ |.+|..+++.+...|+ +|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4578999997 9999999988888899 888887653
No 437
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.20 E-value=0.16 Score=47.87 Aligned_cols=75 Identities=15% Similarity=0.080 Sum_probs=47.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchH-----HHHHHH----cCCC-eE--EeCCCCCchhHHHHhhC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-----FEIGKR----FGVT-EF--VNSKNCGDKSIIIDMTD 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~-----~~~~~~----lg~~-~v--v~~~~~~~~~~i~~~~~ 267 (385)
++.+|||.|+ |.+|...++.+...|+ +|+++++.+++ .+.+.. .+.. .. .|..+ ...+.....
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~ 80 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGY-EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSD---ASSLRRWLD 80 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEecccccccccchhhhccccccccCceEEEEecCCC---HHHHHHHHH
Confidence 4678999987 9999999999999999 78888665432 221110 1111 11 23322 223444444
Q ss_pred C-CccEEEEccCC
Q 016660 268 G-GADYCFECVGL 279 (385)
Q Consensus 268 g-~~d~vid~~g~ 279 (385)
. ++|+||++++.
T Consensus 81 ~~~~d~Vih~A~~ 93 (340)
T PLN02653 81 DIKPDEVYNLAAQ 93 (340)
T ss_pred HcCCCEEEECCcc
Confidence 4 68999999874
No 438
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.19 E-value=0.28 Score=44.15 Aligned_cols=72 Identities=19% Similarity=0.232 Sum_probs=45.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eE--EeCCCCCchhH-HHHhh--CCCccEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EF--VNSKNCGDKSI-IIDMT--DGGADYC 273 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~~d~v 273 (385)
++.++||.|+ |++|...++.+...|+ +|+++.++.+.. .+.. .. .|..+...... +.... -+++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999987 9999999999888999 788888765431 1211 11 23333111111 11221 1368999
Q ss_pred EEccC
Q 016660 274 FECVG 278 (385)
Q Consensus 274 id~~g 278 (385)
|+++|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99987
No 439
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=94.18 E-value=0.23 Score=47.02 Aligned_cols=73 Identities=16% Similarity=0.089 Sum_probs=46.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchH--HHHHHHc----------CCCeE-EeCCCCCchhHHHHhhCC
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRF----------GVTEF-VNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~--~~~~~~l----------g~~~v-v~~~~~~~~~~i~~~~~g 268 (385)
.+|||+|+ |.+|...++.+...|+ +|+++++..+. .+.+..+ ++..+ .|.. ....+.+...+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~l~~~~~~ 76 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGY-EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLT---DSSNLRRIIDE 76 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCC-EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccC---CHHHHHHHHHh
Confidence 37999987 9999999999999999 88888776532 1112111 11111 1222 22335555555
Q ss_pred -CccEEEEccCC
Q 016660 269 -GADYCFECVGL 279 (385)
Q Consensus 269 -~~d~vid~~g~ 279 (385)
++|+||++++.
T Consensus 77 ~~~d~ViH~Aa~ 88 (343)
T TIGR01472 77 IKPTEIYNLAAQ 88 (343)
T ss_pred CCCCEEEECCcc
Confidence 78999999873
No 440
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.17 E-value=0.49 Score=45.11 Aligned_cols=96 Identities=22% Similarity=0.232 Sum_probs=62.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHc--CCCEEEEEc--CCchH-HHHHHHcCCCeEEeCCCCCc-----------------h
Q 016660 203 STVVIFGL-GSIGLAVAEGARLC--GATRIIGVD--VISEK-FEIGKRFGVTEFVNSKNCGD-----------------K 259 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~--G~~~vi~~~--~~~~~-~~~~~~lg~~~vv~~~~~~~-----------------~ 259 (385)
.+|.|+|+ |++|..++...+.. .+ +|+++. ++.++ .+.+++++...++-.++... .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 46899996 99999999988755 56 676664 33333 33566788776654433100 0
Q ss_pred hHHHHhhCC-CccEEEEccCChHHHHHHHHHhccCCceEEEec
Q 016660 260 SIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 260 ~~i~~~~~g-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
+.+.++... .+|+|+.++++...+...+.+++.| +-+.++
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG--K~VaLA 121 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG--KRIALA 121 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC--CcEEEe
Confidence 113333333 6899999999887788899999884 444443
No 441
>PRK06398 aldose dehydrogenase; Validated
Probab=94.16 E-value=0.21 Score=45.10 Aligned_cols=73 Identities=21% Similarity=0.242 Sum_probs=46.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eEEeCCCCCchhH-HHHhhC--CCccEEEE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSI-IIDMTD--GGADYCFE 275 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vv~~~~~~~~~~-i~~~~~--g~~d~vid 275 (385)
.+.++||.|+ |++|...+..+...|+ +|+.+++++++.. ... ...|..+...... +..... +.+|++|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999997 9999999999999999 8888877655421 111 1123333211111 222221 36899999
Q ss_pred ccCC
Q 016660 276 CVGL 279 (385)
Q Consensus 276 ~~g~ 279 (385)
+.|.
T Consensus 79 ~Ag~ 82 (258)
T PRK06398 79 NAGI 82 (258)
T ss_pred CCCC
Confidence 8874
No 442
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.15 E-value=0.51 Score=40.28 Aligned_cols=91 Identities=18% Similarity=0.220 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCCe--EEeCCCCCchhHHHHhh-CCCccEE
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSIIIDMT-DGGADYC 273 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~--vv~~~~~~~~~~i~~~~-~g~~d~v 273 (385)
++.+||=+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+. ++..+ +..+. .+.||+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d-------~~~~~~~~~fD~I 113 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR-------AEDFQHEEQFDVI 113 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc-------hhhccccCCccEE
Confidence 378899888754 566666666553338999999988666554 345433 22211 11222 2379998
Q ss_pred EEcc-C-ChHHHHHHHHHhccCCceEEEe
Q 016660 274 FECV-G-LASLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 274 id~~-g-~~~~~~~~~~~l~~~~G~~v~~ 300 (385)
+-.. . -+..++.+.+.|+++ |+++..
T Consensus 114 ~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 114 TSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 7543 1 134456788899997 998866
No 443
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.13 E-value=0.62 Score=40.36 Aligned_cols=100 Identities=17% Similarity=0.157 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCch-------------------H----HHHHHHcCCCeEEeCCCCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------K----FEIGKRFGVTEFVNSKNCG 257 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~-------------------~----~~~~~~lg~~~vv~~~~~~ 257 (385)
.+.+|+|+|+|++|.-.++.+-..|.+++..+|...= | .+.++++..+--+......
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~ 99 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDD 99 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecC
Confidence 4677999999999999999999999988998874410 1 1123344443222221111
Q ss_pred chhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCc-eEEEecc
Q 016660 258 DKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG-KTIVLGV 302 (385)
Q Consensus 258 ~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~g~ 302 (385)
..+...++. .++|+|+++..........-+...+. + .++..+.
T Consensus 100 ~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~ip~i~~~~ 143 (197)
T cd01492 100 ISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GVKFYATGV 143 (197)
T ss_pred ccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEEe
Confidence 111111222 26899999988766444444444443 4 3444443
No 444
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.12 E-value=0.44 Score=44.67 Aligned_cols=94 Identities=18% Similarity=0.288 Sum_probs=59.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHcC----CCEEEEEcC--CchHHHHHHHcCC--------------------Ce--EEeCCC
Q 016660 204 TVVIFGLGSIGLAVAEGARLCG----ATRIIGVDV--ISEKFEIGKRFGV--------------------TE--FVNSKN 255 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G----~~~vi~~~~--~~~~~~~~~~lg~--------------------~~--vv~~~~ 255 (385)
+|.|.|.|.+|..+++.+...+ + .|+++.. +.+.+..+.++.- +. ++..++
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999987653 5 5666532 2233344433221 11 111111
Q ss_pred CCchhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccC
Q 016660 256 CGDKSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 256 ~~~~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+.-..+...++|+||+|+|.....+.+...+..| ++.|.++..
T Consensus 80 ----p~~~~w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP 122 (325)
T TIGR01532 80 ----PEALPWRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP 122 (325)
T ss_pred ----hhhccccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence 0001122228999999999988888899999996 888888864
No 445
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.11 E-value=0.44 Score=43.90 Aligned_cols=94 Identities=19% Similarity=0.247 Sum_probs=65.9
Q ss_pred ccccchhhhhhhhhhhccC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCc
Q 016660 181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~ 258 (385)
.+||....... +.+..++ -.|.+|.|+|. +.+|.-.+.++...|+ .|++..+....
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~~-------------------- 195 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRSTD-------------------- 195 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCCC--------------------
Confidence 45665444433 3344444 47899999998 6999999999999999 89888544321
Q ss_pred hhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccC
Q 016660 259 KSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 259 ~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+.+.+. ..|+||-++|.+..+...+ ++++ ..++.+|..
T Consensus 196 ---l~e~~~-~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 196 ---AKALCR-QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred ---HHHHHh-cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 112111 3799999999988776655 8886 788888854
No 446
>PRK03612 spermidine synthase; Provisional
Probab=94.08 E-value=0.47 Score=47.72 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcC-----------CCeEEeCCCCCchhHHHHhhCC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----------VTEFVNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg-----------~~~vv~~~~~~~~~~i~~~~~g 268 (385)
++.++||++|+|. |..+..++++-..++|++++.+++-.+.+++.. .+++ +....+....+ +..++
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~vi~~Da~~~l-~~~~~ 372 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TVVNDDAFNWL-RKLAE 372 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EEEEChHHHHH-HhCCC
Confidence 4567899998764 666777777655469999999999999888721 0111 10110111112 22334
Q ss_pred CccEEEEccCC-----------hHHHHHHHHHhccCCceEEEec
Q 016660 269 GADYCFECVGL-----------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 269 ~~d~vid~~g~-----------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
.||+|+--... .+.++.+.+.|+++ |.++.-.
T Consensus 373 ~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 373 KFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 79999643322 13467889999997 9988654
No 447
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.07 E-value=0.41 Score=42.18 Aligned_cols=100 Identities=19% Similarity=0.193 Sum_probs=59.9
Q ss_pred cCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHcCCCeEE---------eCCCCC-chhHHHHhh
Q 016660 198 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV---------NSKNCG-DKSIIIDMT 266 (385)
Q Consensus 198 ~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vv---------~~~~~~-~~~~i~~~~ 266 (385)
...++.+||+.|+|. |.-++.||. .|+ .|++++.++.-++.+ ++.+..... ...+-. ....+..+.
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 445678999999865 667777775 799 899999999877764 233321100 000000 000011111
Q ss_pred --C-CCccEEEEccC--------ChHHHHHHHHHhccCCceEEEec
Q 016660 267 --D-GGADYCFECVG--------LASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 267 --~-g~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
. +.||.|+|... ....++.+.++|+++ |++.++.
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~~ 155 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLVT 155 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 1 25899999663 123478889999997 8755443
No 448
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.07 E-value=0.72 Score=44.16 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
.+.+|+|+|+|++|..+++.+...|+.+++.+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45679999999999999999999999899999765
No 449
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.04 E-value=0.49 Score=41.95 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=27.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
+..+|||+|+ |.+|...++.+...|+ +|+++.+.
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~ 39 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRS 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3468999997 9999999999999999 55554443
No 450
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.04 E-value=0.15 Score=44.49 Aligned_cols=103 Identities=17% Similarity=0.250 Sum_probs=65.3
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHHH----cCCCeEEeCCCCCchhHHHHhhC--
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSIIIDMTD-- 267 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~--G~~~vi~~~~~~~~~~~~~~----lg~~~vv~~~~~~~~~~i~~~~~-- 267 (385)
..+.....+||-+|++. |+.++.+|+.+ +. +|+.++.++++.+.+++ .|...-+.....+..+.+.++.+
T Consensus 40 l~~~~~~k~vLEIGt~~-GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 40 LVRLTRPKRVLEIGTFT-GYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDG 117 (205)
T ss_dssp HHHHHT-SEEEEESTTT-SHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTT
T ss_pred HHHhcCCceEEEecccc-ccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhcc
Confidence 34455677899999744 77888888876 34 99999999998887754 45432222222223333444432
Q ss_pred --CCccEEE-EccCCh--HHHHHHHHHhccCCceEEEec
Q 016660 268 --GGADYCF-ECVGLA--SLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 268 --g~~d~vi-d~~g~~--~~~~~~~~~l~~~~G~~v~~g 301 (385)
+.||+|| |+--.. ..++.++++++++ |.++.=.
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 3699995 664432 3367888999996 7776543
No 451
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.03 E-value=0.47 Score=42.79 Aligned_cols=78 Identities=22% Similarity=0.093 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCc-hHHH----HHHHcCCCe-E--EeCCCCCchhH-HHHhh--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE----IGKRFGVTE-F--VNSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~-~~~~----~~~~lg~~~-v--v~~~~~~~~~~-i~~~~--~g 268 (385)
++.++||.|+ |++|...++.+...|+ +|+.+.++. +..+ .+++.+... + .|..+...... +.... .+
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5788999987 9999999999999999 666665533 3222 222334321 1 23333111111 22221 13
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
++|+++++.|.
T Consensus 85 ~id~lv~~ag~ 95 (261)
T PRK08936 85 TLDVMINNAGI 95 (261)
T ss_pred CCCEEEECCCC
Confidence 68999999885
No 452
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.02 E-value=0.67 Score=42.10 Aligned_cols=101 Identities=19% Similarity=0.277 Sum_probs=64.9
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHHcC-------CCe--EEeCCCCCchhHHHHh
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFG-------VTE--FVNSKNCGDKSIIIDM 265 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~lg-------~~~--vv~~~~~~~~~~i~~~ 265 (385)
...+.++++||-+|+|. |..+..+++..|. .+|+++|.+++-++.+++.. .+. ++..+.. . ..+
T Consensus 68 ~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~-~----lp~ 141 (261)
T PLN02233 68 WSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDAT-D----LPF 141 (261)
T ss_pred HhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccc-c----CCC
Confidence 34677899999998755 5567778877653 28999999999888775421 111 1111110 0 012
Q ss_pred hCCCccEEEEccC------ChHHHHHHHHHhccCCceEEEeccC
Q 016660 266 TDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 266 ~~g~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
.++.||.|+-..+ -...++++.+.|+++ |+++.+-..
T Consensus 142 ~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~ 184 (261)
T PLN02233 142 DDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN 184 (261)
T ss_pred CCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence 2236999875332 134578999999997 998877543
No 453
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.4 Score=42.95 Aligned_cols=38 Identities=21% Similarity=0.130 Sum_probs=29.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEE-EcCCchHH
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKF 239 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~-~~~~~~~~ 239 (385)
++.+++|.|+ |.+|...++.+...|+ +|++ ..++.++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~ 44 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAA 44 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHH
Confidence 3578999997 9999999998888899 6655 45555544
No 454
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=93.97 E-value=0.23 Score=39.26 Aligned_cols=90 Identities=17% Similarity=0.104 Sum_probs=53.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHH-cCCCEEEEEcCCc-hHHHHHHHcC----CCe-EEeCCCCCchhHHHHhhCCCccEEEE
Q 016660 204 TVVIFGL-GSIGLAVAEGARL-CGATRIIGVDVIS-EKFEIGKRFG----VTE-FVNSKNCGDKSIIIDMTDGGADYCFE 275 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~-~G~~~vi~~~~~~-~~~~~~~~lg----~~~-vv~~~~~~~~~~i~~~~~g~~d~vid 275 (385)
+|.|+|+ |.+|...++++.. -.++.+.++.++. ....+...++ ... .+...+ ...+ ...|+||.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~Dvvf~ 72 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD------PEEL--SDVDVVFL 72 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS------GHHH--TTESEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc------hhHh--hcCCEEEe
Confidence 5889996 9999999888874 4564444454444 2223333222 211 121111 1112 36999999
Q ss_pred ccCChHHHHHHHHHhccCCceEEEecc
Q 016660 276 CVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 276 ~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
|.+.....+..-..+..+ -+++..+.
T Consensus 73 a~~~~~~~~~~~~~~~~g-~~ViD~s~ 98 (121)
T PF01118_consen 73 ALPHGASKELAPKLLKAG-IKVIDLSG 98 (121)
T ss_dssp -SCHHHHHHHHHHHHHTT-SEEEESSS
T ss_pred cCchhHHHHHHHHHhhCC-cEEEeCCH
Confidence 999887566666666775 67777654
No 455
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.96 E-value=0.2 Score=45.29 Aligned_cols=73 Identities=16% Similarity=0.086 Sum_probs=52.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccCC
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVGL 279 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g~ 279 (385)
+|||.|+.+-|...+..+...|+ +|+++..++.+.+.+.+.|...+..-.- ....+.++... ++|+|||++..
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l--~~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGAL--DPQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCC--CHHHHHHHHHhcCCCEEEEcCCH
Confidence 68999884459888888778898 8888888888887777776655542221 22235566655 89999998864
No 456
>PRK08223 hypothetical protein; Validated
Probab=93.94 E-value=0.79 Score=41.99 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 235 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~ 235 (385)
.+.+|+|+|+|++|-.+++.+-.+|+.++..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46779999999999999999999999999888654
No 457
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.94 E-value=0.38 Score=43.51 Aligned_cols=78 Identities=21% Similarity=0.199 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCeE--EeCCCCCchhH-HHHhhC--C
Q 016660 201 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEF--VNSKNCGDKSI-IIDMTD--G 268 (385)
Q Consensus 201 ~~~~VlI~G~-g--~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~v--v~~~~~~~~~~-i~~~~~--g 268 (385)
.+.++||.|+ + ++|.+.++.+...|+ +|+.+.++++..+.+ ++.|...+ +|..+...... +..... +
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5678999987 4 799998888888899 788877664222222 23343322 34333222221 222222 3
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
.+|++++++|.
T Consensus 86 ~iDilVnnag~ 96 (260)
T PRK06603 86 SFDFLLHGMAF 96 (260)
T ss_pred CccEEEEcccc
Confidence 69999998863
No 458
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.92 E-value=0.4 Score=44.42 Aligned_cols=92 Identities=14% Similarity=0.146 Sum_probs=57.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCC----chhHHHHhhCCCccEEEEccCC
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG----DKSIIIDMTDGGADYCFECVGL 279 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~----~~~~i~~~~~g~~d~vid~~g~ 279 (385)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|... +..+.. ........ ..+|+||-++..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 58999999999998888888898 7888888777777776656421 100000 00001111 368999999886
Q ss_pred hHHHHHHHHHh----ccCCceEEEecc
Q 016660 280 ASLVQEAYACC----RKGWGKTIVLGV 302 (385)
Q Consensus 280 ~~~~~~~~~~l----~~~~G~~v~~g~ 302 (385)
.. ++.+++.+ .++ ..++.+.+
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~~n 101 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFLQN 101 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEecC
Confidence 65 44444444 343 45655543
No 459
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.90 E-value=0.32 Score=36.47 Aligned_cols=85 Identities=25% Similarity=0.298 Sum_probs=52.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHcC---CCEEE-EEcCCchHHHHH-HHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 204 TVVIFGLGSIGLAVAEGARLCG---ATRII-GVDVISEKFEIG-KRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G---~~~vi-~~~~~~~~~~~~-~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
+|.|+|+|.+|.+.+.-+...| . +|+ +.++++++.+.+ +++++.... . + ..+ +.+ ..|+||-|+.
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-~-~--~~~-~~~----~advvilav~ 70 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-D-D--NEE-AAQ----EADVVILAVK 70 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-E-E--HHH-HHH----HTSEEEE-S-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-C-C--hHH-hhc----cCCEEEEEEC
Confidence 4778899999999999888888 6 677 548888887765 556643222 0 1 111 222 3799999998
Q ss_pred ChHHHHHHHHH---hccCCceEEEe
Q 016660 279 LASLVQEAYAC---CRKGWGKTIVL 300 (385)
Q Consensus 279 ~~~~~~~~~~~---l~~~~G~~v~~ 300 (385)
... +.+.++. ..++ ..++.+
T Consensus 71 p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 71 PQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred HHH-HHHHHHHHhhccCC-CEEEEe
Confidence 776 4444443 3443 444443
No 460
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.89 E-value=0.23 Score=49.96 Aligned_cols=71 Identities=20% Similarity=0.234 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-HcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCC
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGL 279 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~ 279 (385)
.+.++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. +++.. ++...+ .........|+++++++-
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~------~~~~~~~~~diiINtT~v 449 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD------LENFHPEEGMILANTTSV 449 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH------hhhhccccCeEEEecccC
Confidence 46789999999999999999999999 8999988877766543 44432 222221 111111246888887754
No 461
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.88 E-value=0.3 Score=44.79 Aligned_cols=76 Identities=20% Similarity=0.218 Sum_probs=45.3
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH-Hc----CCCeE-----EeCCCCCchhHHHHhhCC-CccE
Q 016660 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----GVTEF-----VNSKNCGDKSIIIDMTDG-GADY 272 (385)
Q Consensus 205 VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~l----g~~~v-----v~~~~~~~~~~i~~~~~g-~~d~ 272 (385)
|||.|+ |.+|...++.+...+.++++.+++++.++..++ ++ ....+ ....+-.+...+...... ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799987 999999999998889889999999988776554 33 11111 112221223335566665 8999
Q ss_pred EEEccCCh
Q 016660 273 CFECVGLA 280 (385)
Q Consensus 273 vid~~g~~ 280 (385)
||.++.-+
T Consensus 81 VfHaAA~K 88 (293)
T PF02719_consen 81 VFHAAALK 88 (293)
T ss_dssp EEE-----
T ss_pred EEEChhcC
Confidence 99987754
No 462
>PRK07577 short chain dehydrogenase; Provisional
Probab=93.88 E-value=0.21 Score=44.17 Aligned_cols=72 Identities=19% Similarity=0.256 Sum_probs=46.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCC-eEEeCCCCCchhH-HHHhhCC-CccEEEEcc
Q 016660 202 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSI-IIDMTDG-GADYCFECV 277 (385)
Q Consensus 202 ~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vv~~~~~~~~~~-i~~~~~g-~~d~vid~~ 277 (385)
+.++||.|+ |.+|...++.+...|+ +|+.+.++.++ .+... ...|..+...... +...... +.|++|.+.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 568999987 9999999999989998 88888877654 12221 1234333211111 3333233 689999988
Q ss_pred CC
Q 016660 278 GL 279 (385)
Q Consensus 278 g~ 279 (385)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 74
No 463
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=93.87 E-value=0.77 Score=43.47 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=55.2
Q ss_pred EEEEEcCCHHHHHHHHHHHH-cCCCEEEEEc-CCchHHH-HHHHcCCCeEEeC--------CCCC--chhHHHHhhCCCc
Q 016660 204 TVVIFGLGSIGLAVAEGARL-CGATRIIGVD-VISEKFE-IGKRFGVTEFVNS--------KNCG--DKSIIIDMTDGGA 270 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~-~G~~~vi~~~-~~~~~~~-~~~~lg~~~vv~~--------~~~~--~~~~i~~~~~g~~ 270 (385)
+|.|.|.|.+|...++.+.. -++ .++++. .+++..+ +++..|.+ +... .+.. .......+. .++
T Consensus 3 kVaI~G~GrIGr~va~al~~~~d~-eLvav~d~~~~~~~~la~~~G~~-~~~~~~~~~~~~~~~~i~V~~~~~el~-~~v 79 (341)
T PRK04207 3 KVGVNGYGTIGKRVADAVAAQPDM-ELVGVAKTKPDYEARVAVEKGYP-LYVADPEREKAFEEAGIPVAGTIEDLL-EKA 79 (341)
T ss_pred EEEEECCCHHHHHHHHHHhcCCCc-EEEEEECCChHHHHHHHHhcCCC-ccccCccccccccCCceEEcCChhHhh-ccC
Confidence 58899999999998887764 467 555553 3333333 23434432 1100 0000 000012222 259
Q ss_pred cEEEEccCChHHHHHHHHHhccCCceEEEecc
Q 016660 271 DYCFECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 271 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
|+||||++.....+.+..+++.| -+++..+.
T Consensus 80 DVVIdaT~~~~~~e~a~~~~~aG-k~VI~~~~ 110 (341)
T PRK04207 80 DIVVDATPGGVGAKNKELYEKAG-VKAIFQGG 110 (341)
T ss_pred CEEEECCCchhhHHHHHHHHHCC-CEEEEcCC
Confidence 99999999988777777777775 56665554
No 464
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.85 E-value=0.41 Score=44.72 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHc----CC--C-eEEeCCCCCchhHHHHhhCCCccE
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GV--T-EFVNSKNCGDKSIIIDMTDGGADY 272 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l----g~--~-~vv~~~~~~~~~~i~~~~~g~~d~ 272 (385)
.+.+|||.|+ |.+|...+..+...|+ +|+++.++.++.+....+ +. . .++. .+......+.+... ++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~-~~d~ 80 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRKKTEHLLALDGAKERLKLFK-ADLLEESSFEQAIE-GCDA 80 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchHHHHHHHhccCCCCceEEEe-cCCCCcchHHHHHh-CCCE
Confidence 4678999997 9999999998888899 788776665543322211 11 1 1221 11111222333333 5899
Q ss_pred EEEccC
Q 016660 273 CFECVG 278 (385)
Q Consensus 273 vid~~g 278 (385)
||++++
T Consensus 81 vih~A~ 86 (322)
T PLN02986 81 VFHTAS 86 (322)
T ss_pred EEEeCC
Confidence 999886
No 465
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=93.83 E-value=0.53 Score=44.67 Aligned_cols=78 Identities=14% Similarity=0.095 Sum_probs=49.0
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH-HHc--CCC-eEEeCCCCCchhHHHHhhCCCccEE
Q 016660 199 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF--GVT-EFVNSKNCGDKSIIIDMTDGGADYC 273 (385)
Q Consensus 199 ~~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l--g~~-~vv~~~~~~~~~~i~~~~~g~~d~v 273 (385)
-..+.+|||+|+ |.+|...++.+...|+ +|+++.++.++...+ ..+ +.. .++. .+......+.+... ++|+|
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~Dl~~~~~~~~~~~-~~d~V 83 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLHLLSKWKEGDRLRLFR-ADLQEEGSFDEAVK-GCDGV 83 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhhccCCeEEEEE-CCCCCHHHHHHHHc-CCCEE
Confidence 456778999987 9999999999988999 788877766544332 222 111 1222 12122222333333 58999
Q ss_pred EEccCC
Q 016660 274 FECVGL 279 (385)
Q Consensus 274 id~~g~ 279 (385)
|++++.
T Consensus 84 ih~A~~ 89 (353)
T PLN02896 84 FHVAAS 89 (353)
T ss_pred EECCcc
Confidence 998864
No 466
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.82 E-value=0.67 Score=41.04 Aligned_cols=70 Identities=14% Similarity=0.230 Sum_probs=49.3
Q ss_pred EEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCch--HHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 205 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE--KFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 205 VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~--~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
|+|+|+ |.+|...++.+...+. +|.++.++.+ +...++..|+..+ . -+....+.+.+... |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~-~d~~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-E-ADYDDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-E-S-TT-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-e-cccCCHHHHHHHHc-CCceEEeecC
Confidence 789997 9999999999999888 7888877764 3455677888543 2 22223333444444 6999999888
No 467
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.80 E-value=1.1 Score=38.98 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=62.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCeE-EeCCCCCchhHHHHhh-CCCccEEE
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF-VNSKNCGDKSIIIDMT-DGGADYCF 274 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~v-v~~~~~~~~~~i~~~~-~g~~d~vi 274 (385)
.+.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+ +...+ ....+.... ++.+|.|+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~d--~~~~l~~~~~~~~~D~V~ 116 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCGD--AVEVLLDMFPDGSLDRIY 116 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEecC--HHHHHHHHcCccccceEE
Confidence 567888889876 7777788876643489999999998887764 233322 11111 112222222 33789887
Q ss_pred EccC--------------ChHHHHHHHHHhccCCceEEEec
Q 016660 275 ECVG--------------LASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 275 d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g 301 (385)
-... ....++.+.+.|+++ |.+++..
T Consensus 117 ~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 117 LNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 5332 234588999999997 9988764
No 468
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.77 E-value=0.5 Score=46.50 Aligned_cols=72 Identities=19% Similarity=0.153 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchH----HHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEc
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEK----FEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFEC 276 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~----~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~ 276 (385)
.+.+++|+|.|.+|+.++.+++..|+ +|++.+..... .+.+++.|......... ..+ ...++|+|+..
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~----~~~---~~~~~d~vV~s 75 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP----LEL---LDEDFDLMVKN 75 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC----HHH---hcCcCCEEEEC
Confidence 36789999998899999999999999 89998865421 23345566543322111 011 11248899887
Q ss_pred cCCh
Q 016660 277 VGLA 280 (385)
Q Consensus 277 ~g~~ 280 (385)
.|-+
T Consensus 76 ~gi~ 79 (447)
T PRK02472 76 PGIP 79 (447)
T ss_pred CCCC
Confidence 7643
No 469
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.77 E-value=0.5 Score=46.54 Aligned_cols=75 Identities=16% Similarity=0.258 Sum_probs=53.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH-cCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
+|+|+|+|.+|...++.+...|. .|++++.++++.+.+++ ++...+. -+. .....+....-.++|.++-+++...
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~-gd~-~~~~~l~~~~~~~a~~vi~~~~~~~ 77 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVV-GNG-SSPDVLREAGAEDADLLIAVTDSDE 77 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEE-eCC-CCHHHHHHcCCCcCCEEEEecCChH
Confidence 58899999999999999999998 78899988888888765 6554332 222 2222233332237999999888765
No 470
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.76 E-value=0.43 Score=43.19 Aligned_cols=78 Identities=19% Similarity=0.276 Sum_probs=46.6
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCeE--EeCCCCCchhH-HHHhhC--C
Q 016660 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEF--VNSKNCGDKSI-IIDMTD--G 268 (385)
Q Consensus 201 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~v--v~~~~~~~~~~-i~~~~~--g 268 (385)
++.++||.|+ +++|.+.++.+...|+ +|+.+.+.++..+.+++ +|.... .|..+...... +..... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5678999983 5899999998888999 78877655433333332 243222 23333111111 222222 3
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
++|++|+++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 69999999864
No 471
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=93.76 E-value=0.55 Score=42.76 Aligned_cols=87 Identities=23% Similarity=0.309 Sum_probs=52.3
Q ss_pred EEEEEcCCHHHHHHHHHHHHc-CCCEEEEEcCCchHHH-HHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChH
Q 016660 204 TVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLAS 281 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~-G~~~vi~~~~~~~~~~-~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~ 281 (385)
+|.|+|.|.+|...++.+... +. .+.++...+...+ ....++.. +.-+.+ +.++ ...+|+|++|++...
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~-~l~~v~~~~~~~~~~~~~~~~~-~~~~~d------~~~l-~~~~DvVve~t~~~~ 73 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDL-RVDWVIVPEHSIDAVRRALGEA-VRVVSS------VDAL-PQRPDLVVECAGHAA 73 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCc-eEEEEEEcCCCHHHHhhhhccC-CeeeCC------HHHh-ccCCCEEEECCCHHH
Confidence 588999999999988877654 55 3433322222222 22223211 111111 2233 346999999999988
Q ss_pred HHHHHHHHhccCCceEEEe
Q 016660 282 LVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 282 ~~~~~~~~l~~~~G~~v~~ 300 (385)
..+.+..+|..+ -.++..
T Consensus 74 ~~e~~~~aL~aG-k~Vvi~ 91 (265)
T PRK13303 74 LKEHVVPILKAG-IDCAVI 91 (265)
T ss_pred HHHHHHHHHHcC-CCEEEe
Confidence 778888888885 555543
No 472
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.75 E-value=0.54 Score=42.09 Aligned_cols=75 Identities=19% Similarity=0.162 Sum_probs=46.3
Q ss_pred EEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHH----HHcCCCe-E--EeCCCCCchhH-HHHhh--CCCccE
Q 016660 204 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSI-IIDMT--DGGADY 272 (385)
Q Consensus 204 ~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--v~~~~~~~~~~-i~~~~--~g~~d~ 272 (385)
++||.|+ |.+|...++.+...|+ +|+.+.+++++.+.+ +..+... + .|..+...... +.... .+..|+
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899987 9999999999989999 788888776554322 2234321 2 23322111111 22221 136899
Q ss_pred EEEccCC
Q 016660 273 CFECVGL 279 (385)
Q Consensus 273 vid~~g~ 279 (385)
+|++.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9998874
No 473
>PRK10206 putative oxidoreductase; Provisional
Probab=93.68 E-value=0.46 Score=45.09 Aligned_cols=128 Identities=11% Similarity=0.060 Sum_probs=75.0
Q ss_pred EEEEEcCCHHHH-HHHH-HHHH-cCCCEEE-EEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCC-CccEEEEccC
Q 016660 204 TVVIFGLGSIGL-AVAE-GARL-CGATRII-GVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDG-GADYCFECVG 278 (385)
Q Consensus 204 ~VlI~G~g~vG~-~ai~-la~~-~G~~~vi-~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g-~~d~vid~~g 278 (385)
+|.|+|.|.++. ..+. +++. -++ .++ +.++++++.+.+++++...++ .+ ..++... .+|+|+-++.
T Consensus 3 rvgiiG~G~~~~~~h~~~~~~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~--~~------~~ell~~~~iD~V~I~tp 73 (344)
T PRK10206 3 NCAFIGFGKSTTRYHLPYVLNRKDSW-HVAHIFRRHAKPEEQAPIYSHIHFT--SD------LDEVLNDPDVKLVVVCTH 73 (344)
T ss_pred EEEEECCCHHHhheehhhHhcCCCCE-EEEEEEcCChhHHHHHHhcCCCccc--CC------HHHHhcCCCCCEEEEeCC
Confidence 578999987653 3333 3233 356 454 455555555556666532222 22 3344444 7999999999
Q ss_pred ChHHHHHHHHHhccCCceEEEeccCCCCCcccccHHH------Hh-hcCcEEEEeeecCCCCCCcHHHHHHHHHcCCC
Q 016660 279 LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFE------VL-HSGKILMGSLFGGLKAKSDIPILLKRYMDKEL 349 (385)
Q Consensus 279 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~------~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~ 349 (385)
.....+.+.+++.. |+-|++-.. +..+... .. .++..+.-.. ...+...+..+-+++++|.+
T Consensus 74 ~~~H~~~~~~al~a--GkhVl~EKP-----la~~~~ea~~l~~~a~~~~~~l~v~~--~~R~~p~~~~~k~li~~g~i 142 (344)
T PRK10206 74 ADSHFEYAKRALEA--GKNVLVEKP-----FTPTLAEAKELFALAKSKGLTVTPYQ--NRRFDSCFLTAKKAIESGKL 142 (344)
T ss_pred chHHHHHHHHHHHc--CCcEEEecC-----CcCCHHHHHHHHHHHHHhCCEEEEEE--eeeECHHHHHHHHHHHcCCC
Confidence 98878899999988 566666432 2222221 12 2455554332 22223567778888888755
No 474
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.68 E-value=0.25 Score=45.37 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=37.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~ 243 (385)
..+.++||+|+|+.+.+++..+...|+++++++.++.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34678999999999999999888899989999999988866553
No 475
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.67 E-value=0.6 Score=42.11 Aligned_cols=77 Identities=18% Similarity=0.111 Sum_probs=46.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc-CCchHHHHH-HH----cCCC-eE--EeCCCCCchhH-HHHhh--C
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKFEIG-KR----FGVT-EF--VNSKNCGDKSI-IIDMT--D 267 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~-~~~~~~~~~-~~----lg~~-~v--v~~~~~~~~~~-i~~~~--~ 267 (385)
++.++||.|+ +++|...+..+...|+ +|+.+. +++++.+.. ++ .+.. .. +|..+...... +.+.. -
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 5789999997 9999999998889999 777764 344443322 21 2432 22 23333211111 22221 1
Q ss_pred CCccEEEEccC
Q 016660 268 GGADYCFECVG 278 (385)
Q Consensus 268 g~~d~vid~~g 278 (385)
+.+|++++++|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 36899999885
No 476
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.63 E-value=0.56 Score=42.89 Aligned_cols=94 Identities=16% Similarity=0.261 Sum_probs=64.7
Q ss_pred ccccchhhhhhhhhhhccC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCc
Q 016660 181 LLSCGVSTGVGAAWRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGD 258 (385)
Q Consensus 181 ~l~~~~~ta~~al~~~~~~-~~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~ 258 (385)
.+||.....+. +.+..++ -.|.+|+|+|- ..+|.-..+++...|+ .|+++.+....
T Consensus 138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T~~-------------------- 195 (285)
T PRK10792 138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFTKN-------------------- 195 (285)
T ss_pred CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCCCC--------------------
Confidence 35665444443 3344444 36999999997 5599999999999999 88888643211
Q ss_pred hhHHHHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccC
Q 016660 259 KSIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 259 ~~~i~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+.+.+. .+|++|.++|.+..+.. +.++++ ..++.+|..
T Consensus 196 ---l~~~~~-~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 196 ---LRHHVR-NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred ---HHHHHh-hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 112211 48999999999885543 788886 788888854
No 477
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.61 E-value=0.61 Score=41.67 Aligned_cols=76 Identities=22% Similarity=0.300 Sum_probs=48.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHH----cCCCe-E--EeCCCCCchhH-HHHhh--CCCcc
Q 016660 203 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE-F--VNSKNCGDKSI-IIDMT--DGGAD 271 (385)
Q Consensus 203 ~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~-v--v~~~~~~~~~~-i~~~~--~g~~d 271 (385)
.++||.|+ |.+|...+..+...|+ +|+++++++++.+.+.. .+... + .|..+...... +.... .++.|
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999997 9999999998888999 89999888776654432 23221 1 23333111111 11221 23689
Q ss_pred EEEEccCC
Q 016660 272 YCFECVGL 279 (385)
Q Consensus 272 ~vid~~g~ 279 (385)
+||.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988864
No 478
>PRK12827 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.63 Score=41.39 Aligned_cols=33 Identities=33% Similarity=0.419 Sum_probs=27.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV 234 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~ 234 (385)
++.++||.|+ |++|...+..+...|+ +|+.+++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~-~v~~~~~ 38 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGA-DVIVLDI 38 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEcC
Confidence 3568999997 9999999988888999 6777543
No 479
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=93.59 E-value=0.071 Score=28.55 Aligned_cols=22 Identities=18% Similarity=0.271 Sum_probs=15.8
Q ss_pred eeEEEeccCCCCcEEEEeecCCC
Q 016660 17 CRAAIATAPGEPLVIDEVIVDPP 39 (385)
Q Consensus 17 ~~a~~~~~~~~~l~~~~~~~p~~ 39 (385)
|||++++++++ ++++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 79999999998 99999998864
No 480
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=93.56 E-value=0.32 Score=43.15 Aligned_cols=101 Identities=22% Similarity=0.408 Sum_probs=64.1
Q ss_pred hhccCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CEEEEEcCCchHHHHHHH----cCCCe--EEeCCCCCchhHHHHhhC
Q 016660 195 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSIIIDMTD 267 (385)
Q Consensus 195 ~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~----lg~~~--vv~~~~~~~~~~i~~~~~ 267 (385)
....++++++||=+|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+... ..+..
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----~~~~~ 112 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAME-----LPFDD 112 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhc-----CCCCC
Confidence 445677899999998865 6677788877642 289999999888776654 23222 22111100 01122
Q ss_pred CCccEEEEccC------ChHHHHHHHHHhccCCceEEEecc
Q 016660 268 GGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 268 g~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
+.+|+|+-... ....++++.+.|+++ |.++.+-.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 113 NSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 37999975322 124467889999997 99987643
No 481
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=93.55 E-value=0.12 Score=38.31 Aligned_cols=84 Identities=25% Similarity=0.419 Sum_probs=53.5
Q ss_pred EcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe---EEeCCCCCchhHHHHhhCCCccEEEEccCC-----
Q 016660 208 FGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE---FVNSKNCGDKSIIIDMTDGGADYCFECVGL----- 279 (385)
Q Consensus 208 ~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~---vv~~~~~~~~~~i~~~~~g~~d~vid~~g~----- 279 (385)
+|+| .|..+..+++.-+. +|++++.+++..+.+++..... +...+. .. ..+.++.||+|+....-
T Consensus 3 iG~G-~G~~~~~l~~~~~~-~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~---~~--l~~~~~sfD~v~~~~~~~~~~~ 75 (95)
T PF08241_consen 3 IGCG-TGRFAAALAKRGGA-SVTGIDISEEMLEQARKRLKNEGVSFRQGDA---ED--LPFPDNSFDVVFSNSVLHHLED 75 (95)
T ss_dssp ET-T-TSHHHHHHHHTTTC-EEEEEES-HHHHHHHHHHTTTSTEEEEESBT---TS--SSS-TT-EEEEEEESHGGGSSH
T ss_pred ecCc-CCHHHHHHHhccCC-EEEEEeCCHHHHHHHHhcccccCchheeehH---Hh--CccccccccccccccceeeccC
Confidence 4655 48888888888444 9999999999888888755432 222111 10 12223479999864432
Q ss_pred -hHHHHHHHHHhccCCceEEE
Q 016660 280 -ASLVQEAYACCRKGWGKTIV 299 (385)
Q Consensus 280 -~~~~~~~~~~l~~~~G~~v~ 299 (385)
...++++.+.|+++ |+++.
T Consensus 76 ~~~~l~e~~rvLk~g-G~l~~ 95 (95)
T PF08241_consen 76 PEAALREIYRVLKPG-GRLVI 95 (95)
T ss_dssp HHHHHHHHHHHEEEE-EEEEE
T ss_pred HHHHHHHHHHHcCcC-eEEeC
Confidence 24478999999997 98864
No 482
>PRK09134 short chain dehydrogenase; Provisional
Probab=93.55 E-value=0.6 Score=41.99 Aligned_cols=78 Identities=13% Similarity=0.088 Sum_probs=45.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcC-CchHHHH-HH---HcCCC-eE--EeCCCCCchhH-HHHhh--CC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI-GK---RFGVT-EF--VNSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~-~~~~~~~-~~---~lg~~-~v--v~~~~~~~~~~-i~~~~--~g 268 (385)
.+.++||.|+ |.+|...++.+...|+ +|+.+.+ +.++.+. .. ..+.. +. .|..+...... +.+.. .+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568999997 9999999988888999 6666544 3333332 22 22432 12 23333111111 11111 23
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
++|++|.+.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 68999999874
No 483
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=93.54 E-value=0.34 Score=44.78 Aligned_cols=72 Identities=21% Similarity=0.177 Sum_probs=50.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHH
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLV 283 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~ 283 (385)
+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+... .+ ..+.. ...|+||.|+.....+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~~------~~~~~-~~aDivi~~vp~~~~~ 69 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA---ET------ARQVT-EQADVIFTMVPDSPQV 69 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc---CC------HHHHH-hcCCEEEEecCCHHHH
Confidence 37788999999988888888898 89999999999888887775321 11 11111 1478888888876444
Q ss_pred HHH
Q 016660 284 QEA 286 (385)
Q Consensus 284 ~~~ 286 (385)
...
T Consensus 70 ~~v 72 (291)
T TIGR01505 70 EEV 72 (291)
T ss_pred HHH
Confidence 433
No 484
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=93.54 E-value=0.95 Score=37.28 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=55.5
Q ss_pred EEEEEcCCHHHHHHHHHHHH-cCCCEEEEE-c-CCchHHHHHHH----cCC-CeEEeCCCCC-------------chhHH
Q 016660 204 TVVIFGLGSIGLAVAEGARL-CGATRIIGV-D-VISEKFEIGKR----FGV-TEFVNSKNCG-------------DKSII 262 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~-~G~~~vi~~-~-~~~~~~~~~~~----lg~-~~vv~~~~~~-------------~~~~i 262 (385)
+|.|+|.|.+|...++.+.. .++ .++++ + .+.+.+..+.+ .|. ..-+...+.. ..+.-
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~-~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p~~ 80 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDI-EVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDPAN 80 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC-EEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCChHH
Confidence 57899999999998888774 466 44444 3 23444444433 221 0001111100 00101
Q ss_pred HHhhCCCccEEEEccCChHHHHHHHHHhccCCceEEEeccC
Q 016660 263 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 263 ~~~~~g~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
..+..-++|+|+||+|.-.+.+.+...+..| .+-|+++..
T Consensus 81 ~~w~~~gvDiVie~tG~f~~~~~~~~hl~~G-akkViisap 120 (149)
T smart00846 81 LPWKELGVDIVVECTGKFTTREKASAHLKAG-AKKVIISAP 120 (149)
T ss_pred CcccccCCeEEEeccccccchHHHHHHHHcC-CCEEEeCCC
Confidence 1122227999999988755566777888886 777777764
No 485
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=93.51 E-value=0.91 Score=44.55 Aligned_cols=103 Identities=18% Similarity=0.241 Sum_probs=62.1
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCEEEEEcCCchHHHHHH----HcCCCeE--EeCCCCCchhHHHHhhCC
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEF--VNSKNCGDKSIIIDMTDG 268 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~G-~~~vi~~~~~~~~~~~~~----~lg~~~v--v~~~~~~~~~~i~~~~~g 268 (385)
..+++++++||=.|+|+ |..+..+++.++ ..+|++++.++++++.++ .+|.+.+ +..+...... ......+
T Consensus 247 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~-~~~~~~~ 324 (434)
T PRK14901 247 LLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLE-LKPQWRG 324 (434)
T ss_pred HhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhccc-ccccccc
Confidence 35678899988887654 444555565543 238999999999887664 4776542 2221110100 0001134
Q ss_pred CccEEE-E--ccCC-------------------------hHHHHHHHHHhccCCceEEEec
Q 016660 269 GADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 269 ~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 301 (385)
.||.|+ | |+|. ...+..+++.+++| |++|+.-
T Consensus 325 ~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpg-G~lvyst 384 (434)
T PRK14901 325 YFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPG-GTLVYAT 384 (434)
T ss_pred cCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 699886 4 4442 13367889999997 9988653
No 486
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.47 E-value=0.58 Score=42.07 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=26.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEc
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 233 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~ 233 (385)
.+.++||.|+ |++|...++.+...|+ +|+++.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~-~vv~i~ 39 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGA-KAVAIH 39 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-cEEEEe
Confidence 4578999987 9999999999988999 555553
No 487
>PRK05855 short chain dehydrogenase; Validated
Probab=93.47 E-value=0.47 Score=48.14 Aligned_cols=78 Identities=21% Similarity=0.222 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH----HcCCC-eE--EeCCCCCchhH-HHHhh--CCC
Q 016660 201 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSI-IIDMT--DGG 269 (385)
Q Consensus 201 ~~~~VlI~G~-g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--v~~~~~~~~~~-i~~~~--~g~ 269 (385)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. +.|.. .+ .|..+...... +.+.. .+.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999987 9999999988888999 7999988877655432 23432 12 23333111111 22221 236
Q ss_pred ccEEEEccCC
Q 016660 270 ADYCFECVGL 279 (385)
Q Consensus 270 ~d~vid~~g~ 279 (385)
+|++|+++|.
T Consensus 393 id~lv~~Ag~ 402 (582)
T PRK05855 393 PDIVVNNAGI 402 (582)
T ss_pred CcEEEECCcc
Confidence 8999999875
No 488
>PLN02928 oxidoreductase family protein
Probab=93.45 E-value=0.52 Score=44.72 Aligned_cols=97 Identities=25% Similarity=0.383 Sum_probs=58.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcC-----CCeEEeCCCCCchhHHHHhhCCCccEEE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSIIIDMTDGGADYCF 274 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg-----~~~vv~~~~~~~~~~i~~~~~g~~d~vi 274 (385)
-.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++..+... ..++ ...+++... ... .+.++.. ..|+|+
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~-~L~ell~-~aDiVv 231 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHE-DIYEFAG-EADIVV 231 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-ccc-CHHHHHh-hCCEEE
Confidence 357899999999999999999999999 89999876332211 1111 001111000 000 1222222 378888
Q ss_pred EccCChH-H---H-HHHHHHhccCCceEEEecc
Q 016660 275 ECVGLAS-L---V-QEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 275 d~~g~~~-~---~-~~~~~~l~~~~G~~v~~g~ 302 (385)
-+.+... + + .+.+..|+++ ..+|.++-
T Consensus 232 l~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 232 LCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred ECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 8776332 1 1 3677788886 77777763
No 489
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.42 E-value=0.98 Score=42.48 Aligned_cols=89 Identities=17% Similarity=0.083 Sum_probs=62.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCe-----------EEeCCCCCchhHHHHhhCCCccE
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-----------FVNSKNCGDKSIIIDMTDGGADY 272 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~-----------vv~~~~~~~~~~i~~~~~g~~d~ 272 (385)
+|.|+|+|.+|...+..+...|. .|.+.++++++.+.+.+.+... +....+ ..+.. ...|+
T Consensus 6 ~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~------~~e~~-~~aD~ 77 (328)
T PRK14618 6 RVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTAD------PEEAL-AGADF 77 (328)
T ss_pred eEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCC------HHHHH-cCCCE
Confidence 68999999999999998888898 8999998888777666542110 111111 11211 25899
Q ss_pred EEEccCChHHHHHHHHHhccCCceEEEecc
Q 016660 273 CFECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 273 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
||-++.... +++.++.++++ -.++.+..
T Consensus 78 Vi~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 78 AVVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 999999987 67888888885 66665544
No 490
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.39 E-value=1.2 Score=41.68 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=60.7
Q ss_pred hhhhccCCCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHH---HHHHc-CCC---eEEeCCCCCchhHHHHh
Q 016660 193 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE---IGKRF-GVT---EFVNSKNCGDKSIIIDM 265 (385)
Q Consensus 193 l~~~~~~~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~---~~~~l-g~~---~vv~~~~~~~~~~i~~~ 265 (385)
+.......++++||=+|+|. |..+..+++. |+..|++++.++.-.. .++++ +.. ++.. .+ +..+
T Consensus 113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~-~~------ie~l 183 (314)
T TIGR00452 113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP-LG------IEQL 183 (314)
T ss_pred HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE-CC------HHHC
Confidence 44445667789999999876 6666666654 6668999998875433 22222 211 1211 11 2222
Q ss_pred hC-CCccEEEEcc-----CCh-HHHHHHHHHhccCCceEEEe
Q 016660 266 TD-GGADYCFECV-----GLA-SLVQEAYACCRKGWGKTIVL 300 (385)
Q Consensus 266 ~~-g~~d~vid~~-----g~~-~~~~~~~~~l~~~~G~~v~~ 300 (385)
.. ..||+|+-.. ..+ ..+.++.+.|++| |++++-
T Consensus 184 p~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 184 HELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred CCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 22 2699998643 122 4588999999997 998864
No 491
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.39 E-value=0.92 Score=38.67 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=31.5
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHH
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 243 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~ 243 (385)
+|.|+|+|.+|...++++-..|+ .|+..+.+++.++.++
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence 58899999999998888888899 9999999988766543
No 492
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.38 E-value=0.43 Score=44.18 Aligned_cols=72 Identities=17% Similarity=0.157 Sum_probs=50.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCChHHH
Q 016660 204 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLASLV 283 (385)
Q Consensus 204 ~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~~~~ 283 (385)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+... .+ . .+.. ...|+||.|+......
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~~--~----~e~~-~~~d~vi~~vp~~~~~ 72 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA---ST--A----KAVA-EQCDVIITMLPNSPHV 72 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---CC--H----HHHH-hcCCEEEEeCCCHHHH
Confidence 58899999999988887778898 89999999888887777765311 11 1 1111 1468888888765544
Q ss_pred HHH
Q 016660 284 QEA 286 (385)
Q Consensus 284 ~~~ 286 (385)
+..
T Consensus 73 ~~v 75 (296)
T PRK11559 73 KEV 75 (296)
T ss_pred HHH
Confidence 433
No 493
>PRK13243 glyoxylate reductase; Reviewed
Probab=93.37 E-value=0.36 Score=45.56 Aligned_cols=87 Identities=23% Similarity=0.266 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCCCeEEeCCCCCchhHHHHhhCCCccEEEEccCCh
Q 016660 201 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSIIIDMTDGGADYCFECVGLA 280 (385)
Q Consensus 201 ~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g~~ 280 (385)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.+.. ....++.. +.+ . .++.. ..|+|+-+.+..
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~----~~~--l----~ell~-~aDiV~l~lP~t 215 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAE----YRP--L----EELLR-ESDFVSLHVPLT 215 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCE----ecC--H----HHHHh-hCCEEEEeCCCC
Confidence 67899999999999999999999999 899998765443 23334432 111 1 11111 357777666543
Q ss_pred HH----H-HHHHHHhccCCceEEEec
Q 016660 281 SL----V-QEAYACCRKGWGKTIVLG 301 (385)
Q Consensus 281 ~~----~-~~~~~~l~~~~G~~v~~g 301 (385)
.. + .+.+..++++ ..++.++
T Consensus 216 ~~T~~~i~~~~~~~mk~g-a~lIN~a 240 (333)
T PRK13243 216 KETYHMINEERLKLMKPT-AILVNTA 240 (333)
T ss_pred hHHhhccCHHHHhcCCCC-eEEEECc
Confidence 21 1 3456666775 6666655
No 494
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=93.37 E-value=0.87 Score=33.49 Aligned_cols=35 Identities=29% Similarity=0.428 Sum_probs=29.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 234 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~ 234 (385)
-.+.+++|+|+|.+|..+++.+...+.++|.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45788999999999999999999886557877765
No 495
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.37 E-value=0.51 Score=42.65 Aligned_cols=101 Identities=18% Similarity=0.221 Sum_probs=58.1
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCc------hHHHHHHHcCCC-eE--EeCCCCCchhH-HHHhhC
Q 016660 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS------EKFEIGKRFGVT-EF--VNSKNCGDKSI-IIDMTD 267 (385)
Q Consensus 201 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~vi~~~~~~------~~~~~~~~lg~~-~v--v~~~~~~~~~~-i~~~~~ 267 (385)
.+.++||.|+ +++|...++.+...|+ +|+.+.++. +..+.+.+.+.. .. +|..+...... +.....
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4678999986 4899999988888999 777664332 222222222211 12 23333111111 222222
Q ss_pred --CCccEEEEccCCh-------H----------------------HHHHHHHHhccCCceEEEeccC
Q 016660 268 --GGADYCFECVGLA-------S----------------------LVQEAYACCRKGWGKTIVLGVD 303 (385)
Q Consensus 268 --g~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~ 303 (385)
+.+|++|+++|.. . ..+.++..++++ |+++.++..
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 3699999998731 0 123456677776 898887654
No 496
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=93.36 E-value=0.68 Score=41.60 Aligned_cols=101 Identities=16% Similarity=0.254 Sum_probs=64.5
Q ss_pred hccCCCCCEEEEEcCCHHHHHHHHHHHHc--CCCEEEEEcCCchHHHHHH----HcCCCeEEeCCCCCchhHHHHhh---
Q 016660 196 TANVEVGSTVVIFGLGSIGLAVAEGARLC--GATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSIIIDMT--- 266 (385)
Q Consensus 196 ~~~~~~~~~VlI~G~g~vG~~ai~la~~~--G~~~vi~~~~~~~~~~~~~----~lg~~~vv~~~~~~~~~~i~~~~--- 266 (385)
..+.....+||=+|. .+|+.++.+|+.+ +. +|+.++.++++.+.++ +.|..+-+.....+..+.+.++.
T Consensus 74 l~~~~~ak~iLEiGT-~~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~~ 151 (247)
T PLN02589 74 LLKLINAKNTMEIGV-YTGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDG 151 (247)
T ss_pred HHHHhCCCEEEEEeC-hhhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhcc
Confidence 345556678999887 3477777888876 34 8999999998877665 45643322333322333344443
Q ss_pred --CCCccEEE-EccCC--hHHHHHHHHHhccCCceEEE
Q 016660 267 --DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIV 299 (385)
Q Consensus 267 --~g~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~ 299 (385)
.+.||+|| |+--. ...++.+++++++| |.++.
T Consensus 152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred ccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 24799995 54422 24467889999996 77664
No 497
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=93.34 E-value=0.87 Score=44.85 Aligned_cols=80 Identities=18% Similarity=0.074 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHcCCCEEEEEcCCchHHHHHHHcCC-CeEEeCCCCCchhHHHHhhCCCccEEEEccC
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSIIIDMTDGGADYCFECVG 278 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~-~~vv~~~~~~~~~~i~~~~~g~~d~vid~~g 278 (385)
.....++|+|.|.+|...++.+...|. .|++++.++++.+.+++.+. ..++.-+. .....+.+..-..+|.|+-+.+
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~gd~-~~~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHGDG-TDQELLEEEGIDEADAFIALTN 306 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEECCC-CCHHHHHhcCCccCCEEEECCC
Confidence 346789999999999999999999999 89999999998887776432 22333322 2222233332237899998877
Q ss_pred ChH
Q 016660 279 LAS 281 (385)
Q Consensus 279 ~~~ 281 (385)
...
T Consensus 307 ~~~ 309 (453)
T PRK09496 307 DDE 309 (453)
T ss_pred CcH
Confidence 654
No 498
>PRK06141 ornithine cyclodeaminase; Validated
Probab=93.34 E-value=0.57 Score=43.84 Aligned_cols=93 Identities=12% Similarity=0.018 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHH-HcCCCEEEEEcCCchHHHHH-HHc---CCCeEEeCCCCCchhHHHHhhCCCccEEE
Q 016660 200 EVGSTVVIFGLGSIGLAVAEGAR-LCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSIIIDMTDGGADYCF 274 (385)
Q Consensus 200 ~~~~~VlI~G~g~vG~~ai~la~-~~G~~~vi~~~~~~~~~~~~-~~l---g~~~vv~~~~~~~~~~i~~~~~g~~d~vi 274 (385)
....+|+|+|+|.+|.+.++.+. ..+.++|.+..+++++.+.+ +++ |.. +....+ ..+.. .+.|+|+
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~~~------~~~av-~~aDIVi 194 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVVTD------LEAAV-RQADIIS 194 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEeCC------HHHHH-hcCCEEE
Confidence 45688999999999999886544 46777999999998876643 333 322 211111 12111 2589999
Q ss_pred EccCChHHHHHHHHHhccCCceEEEecc
Q 016660 275 ECVGLASLVQEAYACCRKGWGKTIVLGV 302 (385)
Q Consensus 275 d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 302 (385)
.+++++..+- -.+.++++ -.+..+|.
T Consensus 195 ~aT~s~~pvl-~~~~l~~g-~~i~~ig~ 220 (314)
T PRK06141 195 CATLSTEPLV-RGEWLKPG-THLDLVGN 220 (314)
T ss_pred EeeCCCCCEe-cHHHcCCC-CEEEeeCC
Confidence 9888764211 12567885 55556664
No 499
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.32 E-value=0.59 Score=42.15 Aligned_cols=78 Identities=22% Similarity=0.252 Sum_probs=47.1
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCc--hHHH-HHHHcCCC-eE--EeCCCCCchhH-HHHhh--CC
Q 016660 201 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS--EKFE-IGKRFGVT-EF--VNSKNCGDKSI-IIDMT--DG 268 (385)
Q Consensus 201 ~~~~VlI~G~---g~vG~~ai~la~~~G~~~vi~~~~~~--~~~~-~~~~lg~~-~v--v~~~~~~~~~~-i~~~~--~g 268 (385)
.+.++||.|+ +++|...++.+...|+ +|+.++++. +..+ ..++++.. .. .|..+...... +.... -+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4678999985 7999999988888999 888887553 3222 33344432 12 23333211111 22222 24
Q ss_pred CccEEEEccCC
Q 016660 269 GADYCFECVGL 279 (385)
Q Consensus 269 ~~d~vid~~g~ 279 (385)
.+|++|+++|.
T Consensus 85 ~iD~li~nAG~ 95 (256)
T PRK07889 85 GLDGVVHSIGF 95 (256)
T ss_pred CCcEEEEcccc
Confidence 79999998874
No 500
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.31 E-value=0.62 Score=42.50 Aligned_cols=79 Identities=18% Similarity=0.304 Sum_probs=47.5
Q ss_pred CCCCCEEEEEcC---CHHHHHHHHHHHHcCCCEEEEEcCCch---HHH-HHHHcCCCeE--EeCCCCCchhH-HHHhhC-
Q 016660 199 VEVGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFE-IGKRFGVTEF--VNSKNCGDKSI-IIDMTD- 267 (385)
Q Consensus 199 ~~~~~~VlI~G~---g~vG~~ai~la~~~G~~~vi~~~~~~~---~~~-~~~~lg~~~v--v~~~~~~~~~~-i~~~~~- 267 (385)
.-.+.++||.|+ +++|...++.+...|+ +|+.+.++++ +.+ +.++++.... .|..+...... +.....
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 335678999986 5899999999988999 7887766532 222 2234453222 23322111111 222222
Q ss_pred -CCccEEEEccC
Q 016660 268 -GGADYCFECVG 278 (385)
Q Consensus 268 -g~~d~vid~~g 278 (385)
+.+|++|+++|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 36899999887
Done!