Query 016664
Match_columns 385
No_of_seqs 150 out of 231
Neff 4.6
Searched_HMMs 13730
Date Mon Mar 25 17:23:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016664.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016664hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2efka1 a.238.1.4 (A:10-288) C 68.6 30 0.0022 28.6 15.2 17 187-203 99-115 (279)
2 d1fxka_ a.2.5.1 (A:) Prefoldin 64.1 21 0.0015 26.9 9.1 31 222-252 70-100 (107)
3 d1fxkc_ a.2.5.1 (C:) Prefoldin 61.7 26 0.0019 26.9 9.5 27 177-203 16-42 (133)
4 d1seta1 a.2.7.1 (A:1-110) Sery 59.4 20 0.0015 27.0 8.2 67 217-289 28-94 (110)
5 d1fxka_ a.2.5.1 (A:) Prefoldin 58.8 33 0.0024 25.7 10.7 34 218-251 9-42 (107)
6 d1qvra2 c.37.1.20 (A:149-535) 52.4 37 0.0027 31.2 10.3 23 164-187 180-202 (387)
7 d2efla1 a.238.1.4 (A:1-288) Fo 51.4 61 0.0044 26.6 14.3 22 182-203 103-124 (288)
8 d1seta1 a.2.7.1 (A:1-110) Sery 50.2 46 0.0033 24.8 10.9 29 175-204 28-56 (110)
9 d1lrza1 a.2.7.4 (A:245-309) Me 49.9 33 0.0024 24.3 7.4 12 282-293 46-57 (65)
10 d2azeb1 e.63.1.2 (B:201-301) T 48.9 14 0.001 28.4 5.6 31 228-258 5-35 (101)
11 d1qvra2 c.37.1.20 (A:149-535) 48.4 32 0.0023 31.7 9.1 13 24-36 39-51 (387)
12 d1wu9a1 a.245.1.1 (A:191-249) 43.4 15 0.0011 26.0 4.4 26 178-203 10-35 (59)
13 d1ivsa1 a.2.7.3 (A:797-862) Va 41.3 33 0.0024 23.6 6.2 22 224-245 4-25 (66)
14 d1ykhb1 a.252.1.1 (B:2-130) RN 34.3 1E+02 0.0073 24.1 9.7 29 212-240 86-114 (129)
15 d2azeb1 e.63.1.2 (B:201-301) T 33.9 35 0.0026 26.0 5.7 20 299-318 51-70 (101)
16 d1nkpa_ a.38.1.1 (A:) Myc prot 31.6 60 0.0044 23.3 6.5 29 221-249 56-84 (88)
17 d1ivsa1 a.2.7.3 (A:797-862) Va 24.7 98 0.0071 21.0 7.5 22 182-203 3-24 (66)
18 d1fxkc_ a.2.5.1 (C:) Prefoldin 24.2 1.4E+02 0.0098 22.4 13.8 32 268-299 97-128 (133)
19 d2cupa3 g.39.1.3 (A:8-34) Four 24.1 12 0.0009 22.4 1.0 14 24-40 1-14 (27)
20 d2inca1 a.25.1.2 (A:2-492) Tol 23.7 14 0.001 35.7 1.9 21 13-34 386-406 (491)
21 d2p4pa1 d.145.1.4 (A:1-82) Hyp 23.4 3.6 0.00026 30.1 -2.1 25 306-330 20-50 (82)
22 d2e50a1 d.305.1.1 (A:1-222) Pr 21.8 1.7E+02 0.013 24.4 8.7 13 292-304 100-112 (222)
23 d1nkpb_ a.38.1.1 (B:) Max prot 21.7 48 0.0035 23.6 4.2 28 221-248 51-78 (83)
24 d2ap3a1 a.24.27.1 (A:12-196) H 21.4 1.4E+02 0.0099 21.4 16.2 16 231-246 116-131 (185)
25 d1vf7a_ f.46.1.1 (A:) Multidru 20.8 1.2E+02 0.009 23.9 7.2 25 274-298 85-109 (237)
26 d1vcsa1 a.47.2.1 (A:8-96) Vesi 20.5 62 0.0045 23.8 4.7 25 231-255 31-55 (89)
No 1
>d2efka1 a.238.1.4 (A:10-288) CDC42-interacting protein 4, CIP4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.57 E-value=30 Score=28.59 Aligned_cols=17 Identities=6% Similarity=-0.003 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHHh
Q 016664 187 DVTRDIEAYEACLQRLE 203 (385)
Q Consensus 187 ~~~~E~d~Y~~fL~~L~ 203 (385)
...+.++.+....+++.
T Consensus 99 ~~~~~~k~~~~~~~~~~ 115 (279)
T d2efka1 99 EMKQERKMHFQEGRRAQ 115 (279)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33334444444444443
No 2
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=64.14 E-value=21 Score=26.89 Aligned_cols=31 Identities=23% Similarity=0.393 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 222 IEEEERKLEAAIEETEKQNAEVNAELKELEL 252 (385)
Q Consensus 222 Le~EE~~L~~eLeelEke~~~l~~el~~le~ 252 (385)
|+.....+..+++.++++...+..++.+++.
T Consensus 70 l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~ 100 (107)
T d1fxka_ 70 LQEKLETLQLREKTIERQEERVMKKLQEMQV 100 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555555555555555554443
No 3
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=61.66 E-value=26 Score=26.89 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016664 177 LSDKLDKEVDDVTRDIEAYEACLQRLE 203 (385)
Q Consensus 177 Lle~Ld~qle~~~~E~d~Y~~fL~~L~ 203 (385)
-++.|..+++.++.....|....+.|+
T Consensus 16 ~l~~l~~~i~~l~~~~~e~~~~~~~L~ 42 (133)
T d1fxkc_ 16 QVELIQQQMEAVRATISELEILEKTLS 42 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666666666666665555443
No 4
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=59.42 E-value=20 Score=26.98 Aligned_cols=67 Identities=10% Similarity=0.160 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 217 KEKLKIEEEERKLEAAIEETEKQNAEVNAELKELELKSKRFKELEERYWQEFNNFQFQLIAHQEERDAISSKI 289 (385)
Q Consensus 217 ~e~~~Le~EE~~L~~eLeelEke~~~l~~el~~le~e~~~l~~eE~~~w~e~n~~q~ql~~~~ee~~sl~~q~ 289 (385)
.++.++..+-+.+..+++++..++-.+..++.....+. -...-.+...+.-++..++.++..++.++
T Consensus 28 d~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~------~~~l~~~~k~lk~~i~~le~~~~~~~~~l 94 (110)
T d1seta1 28 EALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEE------KEALIARGKALGEEAKRLEEALREKEARL 94 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888888888888888888877775432211 11233444455555555555554444443
No 5
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=58.76 E-value=33 Score=25.73 Aligned_cols=34 Identities=18% Similarity=0.280 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 218 EKLKIEEEERKLEAAIEETEKQNAEVNAELKELE 251 (385)
Q Consensus 218 e~~~Le~EE~~L~~eLeelEke~~~l~~el~~le 251 (385)
++..+..+...+...+..++.+..+...-+.+++
T Consensus 9 ~~q~lq~el~~~~~q~~~le~q~~E~~~vl~eL~ 42 (107)
T d1fxka_ 9 QFQQLQQQAQAISVQKQTVEMQINETQKALEELS 42 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555555554444444444333
No 6
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=52.36 E-value=37 Score=31.22 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=14.0
Q ss_pred CcCCcchHHHHHHHHHHHHHHHHH
Q 016664 164 QVEQPLCLECMRVLSDKLDKEVDD 187 (385)
Q Consensus 164 ~IDhPLC~eC~d~Lle~Ld~qle~ 187 (385)
.|+-|-=.++...| ..+...++.
T Consensus 180 ~v~ep~~~~~~~il-~~~~~~~e~ 202 (387)
T d1qvra2 180 YVDEPTVEETISIL-RGLKEKYEV 202 (387)
T ss_dssp EECCCCHHHHHHHH-HHHHHHHHH
T ss_pred cCCCCcHHHHHHHH-HHHHHHHHh
Confidence 46667666666654 456666654
No 7
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.36 E-value=61 Score=26.58 Aligned_cols=22 Identities=5% Similarity=0.058 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 016664 182 DKEVDDVTRDIEAYEACLQRLE 203 (385)
Q Consensus 182 d~qle~~~~E~d~Y~~fL~~L~ 203 (385)
..-..+..+.++.+.....++.
T Consensus 103 ~~~~~~~~~~~K~~~~~~~k~~ 124 (288)
T d2efla1 103 ARYVQELKQERKSNFHDGRKAQ 124 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444444444444443
No 8
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=50.18 E-value=46 Score=24.83 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 016664 175 RVLSDKLDKEVDDVTRDIEAYEACLQRLEG 204 (385)
Q Consensus 175 d~Lle~Ld~qle~~~~E~d~Y~~fL~~L~~ 204 (385)
+.+++ ++.+...+..+.+...+--+.+.+
T Consensus 28 d~i~~-ld~~rr~l~~~~e~l~~~rN~~sk 56 (110)
T d1seta1 28 EALLA-LDREVQELKKRLQEVQTERNQVAK 56 (110)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443 566666666555555555444443
No 9
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=49.91 E-value=33 Score=24.34 Aligned_cols=12 Identities=42% Similarity=0.371 Sum_probs=4.5
Q ss_pred HHHHHHHHHHHH
Q 016664 282 RDAISSKIEVSQ 293 (385)
Q Consensus 282 ~~sl~~q~~~~~ 293 (385)
+++...++..++
T Consensus 46 ~~s~~~ki~Ea~ 57 (65)
T d1lrza1 46 LDANEQKIEEGK 57 (65)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 10
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.90 E-value=14 Score=28.42 Aligned_cols=31 Identities=3% Similarity=0.129 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 228 KLEAAIEETEKQNAEVNAELKELELKSKRFK 258 (385)
Q Consensus 228 ~L~~eLeelEke~~~l~~el~~le~e~~~l~ 258 (385)
.|.+||+.|+.+...|+..+..+......+.
T Consensus 5 ~L~~El~~L~~~E~~LD~li~~~~~~L~~lt 35 (101)
T d2azeb1 5 GLTQDLRQLQESEQQLDHLMNICTTQLRLLS 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455555555555555555555554444443
No 11
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=48.42 E-value=32 Score=31.74 Aligned_cols=13 Identities=8% Similarity=0.230 Sum_probs=6.0
Q ss_pred cccCCcceEEeec
Q 016664 24 CQNCRHFLCIVGV 36 (385)
Q Consensus 24 Cq~C~~~l~i~g~ 36 (385)
|-.=++.-.+||.
T Consensus 39 ~r~~k~n~llvG~ 51 (387)
T d1qvra2 39 LRRTKNNPVLIGE 51 (387)
T ss_dssp HCSSCCCCEEEEC
T ss_pred hcCCCCCCeEECC
Confidence 4333444455565
No 12
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.42 E-value=15 Score=25.96 Aligned_cols=26 Identities=23% Similarity=0.405 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 016664 178 SDKLDKEVDDVTRDIEAYEACLQRLE 203 (385)
Q Consensus 178 le~Ld~qle~~~~E~d~Y~~fL~~L~ 203 (385)
+..|+..++.+++|||-|-.-|+.++
T Consensus 10 i~elk~~v~~lEkERdFYF~KLRdIE 35 (59)
T d1wu9a1 10 VNVLKLTVEDLEKERDFYFGKLRNIE 35 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45688899999999999999888775
No 13
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=41.30 E-value=33 Score=23.63 Aligned_cols=22 Identities=18% Similarity=0.136 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 016664 224 EEERKLEAAIEETEKQNAEVNA 245 (385)
Q Consensus 224 ~EE~~L~~eLeelEke~~~l~~ 245 (385)
.|..+|.++|+.++++...+..
T Consensus 4 ~E~~RL~K~l~kl~~~i~~~~~ 25 (66)
T d1ivsa1 4 EWRRRQEKRLKELLALAERSQR 25 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444333
No 14
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.28 E-value=1e+02 Score=24.14 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 212 EADFLKEKLKIEEEERKLEAAIEETEKQN 240 (385)
Q Consensus 212 ~e~l~~e~~~Le~EE~~L~~eLeelEke~ 240 (385)
++.-.+.+.+|++|.....+++++.-++.
T Consensus 86 ee~Q~~~i~~Le~E~~~~~~el~~~v~e~ 114 (129)
T d1ykhb1 86 AEEQLRKIDMLQKKLVEVEDEKIEAIKKK 114 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34334444445555444444444443333
No 15
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.91 E-value=35 Score=26.02 Aligned_cols=20 Identities=5% Similarity=-0.064 Sum_probs=8.0
Q ss_pred HhccccCCCceeeeecCCee
Q 016664 299 LKRTNVLNDAFPIWHDGEFG 318 (385)
Q Consensus 299 L~ktNV~nd~F~I~hdG~fG 318 (385)
+++.-.|.+---|--..|-|
T Consensus 51 i~~i~~f~~~tviaIkAP~g 70 (101)
T d2azeb1 51 LRSIADPAEQMVMVIKAPPE 70 (101)
T ss_dssp HHTTSCTTTEEEEEEECCTT
T ss_pred HhhCCCcccceEEEEECCCC
Confidence 34333344433444444433
No 16
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.58 E-value=60 Score=23.26 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 221 KIEEEERKLEAAIEETEKQNAEVNAELKE 249 (385)
Q Consensus 221 ~Le~EE~~L~~eLeelEke~~~l~~el~~ 249 (385)
.|+.+...|..+++.+.++.+.+..++..
T Consensus 56 ~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 56 SVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555544443
No 17
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=24.70 E-value=98 Score=20.98 Aligned_cols=22 Identities=9% Similarity=0.074 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 016664 182 DKEVDDVTRDIEAYEACLQRLE 203 (385)
Q Consensus 182 d~qle~~~~E~d~Y~~fL~~L~ 203 (385)
+.+...++++.+.+...+.+++
T Consensus 3 ~~E~~RL~K~l~kl~~~i~~~~ 24 (66)
T d1ivsa1 3 EEWRRRQEKRLKELLALAERSQ 24 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555444
No 18
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=24.18 E-value=1.4e+02 Score=22.43 Aligned_cols=32 Identities=22% Similarity=0.127 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 268 FNNFQFQLIAHQEERDAISSKIEVSQAHLELL 299 (385)
Q Consensus 268 ~n~~q~ql~~~~ee~~sl~~q~~~~~~qLdkL 299 (385)
...++..+..+.++...+..++.....++++|
T Consensus 97 i~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l 128 (133)
T d1fxkc_ 97 KNELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555555666666666555554
No 19
>d2cupa3 g.39.1.3 (A:8-34) Four and a half LIM domains protein 1, FHL-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.10 E-value=12 Score=22.38 Aligned_cols=14 Identities=43% Similarity=0.909 Sum_probs=10.7
Q ss_pred cccCCcceEEeeccccc
Q 016664 24 CQNCRHFLCIVGVDSYA 40 (385)
Q Consensus 24 Cq~C~~~l~i~g~d~~~ 40 (385)
|-.|+.|+ |+|+-.
T Consensus 1 c~ecrkpi---gad~ke 14 (27)
T d2cupa3 1 CVECRKPI---GADSKE 14 (27)
T ss_dssp CSSSCCBC---CSSSCE
T ss_pred CccccCCc---CcchHH
Confidence 88999995 668753
No 20
>d2inca1 a.25.1.2 (A:2-492) Toluene, o-xylene monooxygenase oxygenase subunit TouA {Pseudomonas stutzeri [TaxId: 316]}
Probab=23.65 E-value=14 Score=35.66 Aligned_cols=21 Identities=24% Similarity=0.599 Sum_probs=17.5
Q ss_pred cccCCCCCceecccCCcceEEe
Q 016664 13 LSVDPNVPRWVCQNCRHFLCIV 34 (385)
Q Consensus 13 ~~~~~~~~~~~Cq~C~~~l~i~ 34 (385)
....+.+|. .||.|+.|++++
T Consensus 386 ~~~~~~lp~-~C~~cq~P~~~~ 406 (491)
T d2inca1 386 LTVPETLPT-ICNMCNLPIAHT 406 (491)
T ss_dssp GGSCSSCBC-BCTTTCSBCBCC
T ss_pred cccCCCCCC-ccccCCCCcccC
Confidence 345678888 999999999986
No 21
>d2p4pa1 d.145.1.4 (A:1-82) Hypothetical protein HD1797 {Haemophilus ducreyi [TaxId: 730]}
Probab=23.36 E-value=3.6 Score=30.15 Aligned_cols=25 Identities=36% Similarity=0.611 Sum_probs=18.3
Q ss_pred CCceeee---ecCCeeeeccc---cCCCCCC
Q 016664 306 NDAFPIW---HDGEFGTINNF---RLGRLPK 330 (385)
Q Consensus 306 nd~F~I~---hdG~fGTINgl---RLGrlp~ 330 (385)
|+.|.|. .++.|-||+|| +||++|.
T Consensus 20 ~~~~~~~~~~~~~~~~TlgG~i~~~lg~iP~ 50 (82)
T d2p4pa1 20 MRALNIHTFPRDENYETIGGFMMYMLRKIPK 50 (82)
T ss_dssp HHHTTCCCSCCSCSSCBHHHHHHHHHCSCCC
T ss_pred HHHhCCCCCCcccCccCHHHHHHHHhCcCCC
Confidence 5556654 45789999998 6788876
No 22
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.81 E-value=1.7e+02 Score=24.38 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=7.7
Q ss_pred HHHHHHHHhcccc
Q 016664 292 SQAHLELLKRTNV 304 (385)
Q Consensus 292 ~~~qLdkL~ktNV 304 (385)
...-|..|....|
T Consensus 100 D~~~L~~L~dI~v 112 (222)
T d2e50a1 100 DEEAMHYLTRVEV 112 (222)
T ss_dssp HHHHGGGEEEEEE
T ss_pred HHHHHHhhhheee
Confidence 3344666766666
No 23
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.67 E-value=48 Score=23.55 Aligned_cols=28 Identities=14% Similarity=0.360 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 221 KIEEEERKLEAAIEETEKQNAEVNAELK 248 (385)
Q Consensus 221 ~Le~EE~~L~~eLeelEke~~~l~~el~ 248 (385)
.|..++..|..+++.+.++...+..++.
T Consensus 51 ~L~~~~~~l~~~~~~l~~~~~~L~~~l~ 78 (83)
T d1nkpb_ 51 YMRRKNHTHQQDIDDLKRQNALLEQQVR 78 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555566666665555555555543
No 24
>d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]}
Probab=21.40 E-value=1.4e+02 Score=21.45 Aligned_cols=16 Identities=6% Similarity=-0.051 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 016664 231 AAIEETEKQNAEVNAE 246 (385)
Q Consensus 231 ~eLeelEke~~~l~~e 246 (385)
..+..+......+...
T Consensus 116 ~~~~~~~~~~~~~~~~ 131 (185)
T d2ap3a1 116 KLHSDYAKAYKKAVNS 131 (185)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3333333333333333
No 25
>d1vf7a_ f.46.1.1 (A:) Multidrug resistance protein MexA domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.83 E-value=1.2e+02 Score=23.90 Aligned_cols=25 Identities=12% Similarity=0.097 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 274 QLIAHQEERDAISSKIEVSQAHLEL 298 (385)
Q Consensus 274 ql~~~~ee~~sl~~q~~~~~~qLdk 298 (385)
++...+.++....++++.++.+|++
T Consensus 85 ~~~~~~~~~~~a~~~l~~a~~~l~~ 109 (237)
T d1vf7a_ 85 QYADANAAYLQSKAAVEQARINLRY 109 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhhcchhHHHHHHHhhhhcc
Confidence 3444444455555666666665553
No 26
>d1vcsa1 a.47.2.1 (A:8-96) Vesicle transport v-SNARE protein Vti1-like 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.46 E-value=62 Score=23.79 Aligned_cols=25 Identities=24% Similarity=0.403 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 016664 231 AAIEETEKQNAEVNAELKELELKSK 255 (385)
Q Consensus 231 ~eLeelEke~~~l~~el~~le~e~~ 255 (385)
+.|.++++..++...-|..++.|..
T Consensus 31 ~~l~~ie~~leEA~ell~qMelEvr 55 (89)
T d1vcsa1 31 QMVANVEKQLEEARELLEQMDLEVR 55 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3344455555555555555554443
Done!