Query 016668
Match_columns 385
No_of_seqs 278 out of 2733
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 08:55:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016668.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016668hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2467 Glycine/serine hydroxy 100.0 1.6E-84 3.4E-89 617.6 22.8 308 76-383 14-330 (477)
2 COG0112 GlyA Glycine/serine hy 100.0 2.8E-78 6.1E-83 583.6 27.2 289 81-383 5-293 (413)
3 PF00464 SHMT: Serine hydroxym 100.0 3.5E-72 7.7E-77 557.1 21.8 301 83-383 1-309 (399)
4 PLN02271 serine hydroxymethylt 100.0 7.2E-71 1.6E-75 560.7 31.0 305 79-383 125-444 (586)
5 PRK13580 serine hydroxymethylt 100.0 8.7E-58 1.9E-62 463.2 28.7 287 81-383 28-348 (493)
6 PLN03226 serine hydroxymethylt 100.0 5.9E-56 1.3E-60 454.7 30.1 306 78-383 10-323 (475)
7 PTZ00094 serine hydroxymethylt 100.0 2.9E-47 6.3E-52 389.6 30.8 302 79-383 11-312 (452)
8 PRK13034 serine hydroxymethylt 100.0 2.2E-43 4.8E-48 357.3 30.6 293 77-383 3-295 (416)
9 cd00378 SHMT Serine-glycine hy 100.0 4.8E-38 1E-42 315.8 30.3 287 84-382 1-287 (402)
10 PRK00011 glyA serine hydroxyme 100.0 1E-37 2.2E-42 315.3 30.3 290 79-382 2-291 (416)
11 COG0520 csdA Selenocysteine ly 99.9 1.7E-23 3.6E-28 210.9 22.8 239 109-373 29-299 (405)
12 COG0436 Aspartate/tyrosine/aro 99.9 7E-22 1.5E-26 198.8 24.7 233 109-365 37-283 (393)
13 COG1104 NifS Cysteine sulfinat 99.9 2.7E-22 5.9E-27 197.3 19.9 236 109-369 8-256 (386)
14 cd00615 Orn_deC_like Ornithine 99.9 2.5E-22 5.3E-27 194.5 14.4 213 153-382 64-284 (294)
15 PRK13238 tnaA tryptophanase/L- 99.9 3.4E-21 7.3E-26 197.5 21.4 267 82-378 12-323 (460)
16 cd06451 AGAT_like Alanine-glyo 99.9 8.2E-21 1.8E-25 187.6 22.9 243 105-380 1-265 (356)
17 PF00266 Aminotran_5: Aminotra 99.9 1.3E-20 2.7E-25 187.8 22.9 240 109-373 6-274 (371)
18 cd06453 SufS_like Cysteine des 99.9 4E-20 8.7E-25 183.8 22.7 242 109-374 6-275 (373)
19 TIGR01822 2am3keto_CoA 2-amino 99.9 5.2E-20 1.1E-24 184.4 22.6 222 114-367 53-288 (393)
20 PRK10874 cysteine sulfinate de 99.9 5.5E-20 1.2E-24 185.1 22.9 237 109-372 26-294 (401)
21 PLN02651 cysteine desulfurase 99.9 4.9E-20 1.1E-24 183.3 20.9 233 109-368 6-254 (364)
22 PRK09295 bifunctional cysteine 99.8 9.1E-20 2E-24 184.0 22.3 237 109-372 30-299 (406)
23 PLN02409 serine--glyoxylate am 99.8 1.2E-19 2.6E-24 183.2 22.6 234 105-372 11-271 (401)
24 TIGR03392 FeS_syn_CsdA cystein 99.8 1.5E-19 3.3E-24 181.6 22.8 238 109-373 23-292 (398)
25 TIGR01979 sufS cysteine desulf 99.8 2.2E-19 4.9E-24 180.5 23.2 239 109-373 25-294 (403)
26 TIGR01976 am_tr_V_VC1184 cyste 99.8 2.9E-19 6.4E-24 179.2 23.3 235 109-369 24-275 (397)
27 COG0399 WecE Predicted pyridox 99.8 3.6E-19 7.8E-24 176.3 22.3 197 114-348 13-213 (374)
28 TIGR01977 am_tr_V_EF2568 cyste 99.8 3.9E-19 8.3E-24 176.8 22.2 242 113-373 11-269 (376)
29 PLN02855 Bifunctional selenocy 99.8 4.4E-19 9.5E-24 180.0 22.5 238 109-372 39-307 (424)
30 cd06454 KBL_like KBL_like; thi 99.8 3.4E-19 7.3E-24 175.0 20.6 223 115-369 17-251 (349)
31 PRK09331 Sep-tRNA:Cys-tRNA syn 99.8 5.6E-19 1.2E-23 177.4 22.5 198 108-328 26-235 (387)
32 KOG0257 Kynurenine aminotransf 99.8 4.5E-19 9.8E-24 173.6 20.7 231 80-328 9-261 (420)
33 TIGR03402 FeS_nifS cysteine de 99.8 4E-19 8.6E-24 177.4 20.6 235 109-368 6-250 (379)
34 TIGR03235 DNA_S_dndA cysteine 99.8 8.4E-19 1.8E-23 173.5 20.7 234 109-368 5-256 (353)
35 PRK06939 2-amino-3-ketobutyrat 99.8 1.1E-18 2.5E-23 174.3 21.9 223 114-367 57-292 (397)
36 PRK02769 histidine decarboxyla 99.8 5E-18 1.1E-22 170.2 26.3 244 116-381 36-299 (380)
37 COG0075 Serine-pyruvate aminot 99.8 1.5E-18 3.3E-23 171.8 22.0 238 105-373 7-264 (383)
38 TIGR02006 IscS cysteine desulf 99.8 1E-18 2.3E-23 176.2 21.0 233 109-368 10-258 (402)
39 PRK02948 cysteine desulfurase; 99.8 1.2E-18 2.7E-23 174.0 21.3 234 109-368 7-252 (381)
40 PRK07179 hypothetical protein; 99.8 2.7E-18 5.8E-23 173.4 23.7 228 109-369 60-300 (407)
41 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 8E-20 1.7E-24 183.3 12.1 210 153-380 71-304 (417)
42 PLN00175 aminotransferase fami 99.8 5.8E-18 1.3E-22 171.6 25.4 238 79-343 32-284 (413)
43 KOG1549 Cysteine desulfurase N 99.8 7.4E-19 1.6E-23 173.9 17.9 198 109-328 50-257 (428)
44 COG1168 MalY Bifunctional PLP- 99.8 3.3E-18 7.2E-23 166.0 21.1 232 110-366 35-281 (388)
45 TIGR01437 selA_rel uncharacter 99.8 3.9E-18 8.5E-23 170.1 21.9 216 111-369 22-259 (363)
46 PLN03032 serine decarboxylase; 99.8 1.9E-17 4.2E-22 165.3 26.1 254 106-381 26-302 (374)
47 PF01041 DegT_DnrJ_EryC1: DegT 99.8 2.8E-18 6.1E-23 171.0 19.8 170 144-342 25-198 (363)
48 TIGR02326 transamin_PhnW 2-ami 99.8 5.6E-18 1.2E-22 168.2 21.8 233 104-370 4-259 (363)
49 PRK11658 UDP-4-amino-4-deoxy-L 99.8 5.7E-18 1.2E-22 169.8 21.4 191 115-341 13-204 (379)
50 TIGR03588 PseC UDP-4-keto-6-de 99.8 5.9E-18 1.3E-22 169.4 21.5 173 144-341 29-207 (380)
51 COG0156 BioF 7-keto-8-aminopel 99.8 5.4E-18 1.2E-22 169.0 20.3 229 107-368 43-290 (388)
52 TIGR03403 nifS_epsilon cystein 99.8 8.5E-18 1.9E-22 168.1 21.7 234 109-368 6-254 (382)
53 TIGR00858 bioF 8-amino-7-oxono 99.8 1.4E-17 3E-22 163.9 22.7 230 105-367 19-264 (360)
54 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.1E-17 2.4E-22 165.8 21.7 210 115-367 35-250 (346)
55 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 2.2E-17 4.8E-22 164.0 23.9 206 105-342 4-224 (361)
56 PRK08960 hypothetical protein; 99.8 3.6E-17 7.8E-22 164.1 25.5 237 80-343 6-259 (387)
57 PRK13479 2-aminoethylphosphona 99.8 1.4E-17 3.1E-22 165.4 22.4 240 106-379 8-270 (368)
58 PRK12414 putative aminotransfe 99.8 3.1E-17 6.7E-22 164.5 24.7 237 81-343 9-260 (384)
59 PRK13520 L-tyrosine decarboxyl 99.8 1.7E-17 3.7E-22 164.5 22.5 266 87-381 4-290 (371)
60 PRK14012 cysteine desulfurase; 99.8 1E-17 2.2E-22 169.0 21.1 233 109-368 10-260 (404)
61 PRK06108 aspartate aminotransf 99.8 2.4E-17 5.2E-22 164.4 23.0 214 103-343 25-257 (382)
62 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.1E-17 2.3E-22 164.7 20.2 169 144-341 18-190 (352)
63 cd06502 TA_like Low-specificit 99.8 6.2E-18 1.3E-22 165.5 18.4 202 109-342 3-218 (338)
64 PRK13237 tyrosine phenol-lyase 99.8 1.2E-17 2.6E-22 168.8 20.5 214 140-376 74-321 (460)
65 cd00617 Tnase_like Tryptophana 99.8 2.1E-17 4.5E-22 168.0 22.2 202 146-372 55-292 (431)
66 PRK08861 cystathionine gamma-s 99.8 4E-18 8.6E-23 171.3 16.7 175 133-341 44-224 (388)
67 PLN03227 serine palmitoyltrans 99.8 3.1E-17 6.7E-22 165.3 23.0 200 109-341 4-230 (392)
68 PRK07366 succinyldiaminopimela 99.8 4.3E-17 9.3E-22 163.5 23.7 238 81-343 5-264 (388)
69 TIGR03540 DapC_direct LL-diami 99.8 1.1E-16 2.4E-21 160.2 26.6 207 111-342 40-261 (383)
70 PRK07337 aminotransferase; Val 99.8 5.1E-17 1.1E-21 162.9 24.1 237 81-344 5-258 (388)
71 TIGR01328 met_gam_lyase methio 99.8 6.3E-18 1.4E-22 170.2 17.3 174 133-341 50-229 (391)
72 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 3.5E-17 7.5E-22 163.4 22.5 201 112-343 18-232 (370)
73 PRK05942 aspartate aminotransf 99.8 1E-16 2.2E-21 161.2 25.8 205 114-343 49-268 (394)
74 PRK05958 8-amino-7-oxononanoat 99.8 4.6E-17 9.9E-22 162.0 22.9 233 105-369 42-288 (385)
75 PRK08574 cystathionine gamma-s 99.8 6.2E-18 1.3E-22 170.0 16.6 167 142-341 51-223 (385)
76 PRK09082 methionine aminotrans 99.8 3.7E-17 8.1E-22 164.0 21.9 238 79-343 8-261 (386)
77 PRK07811 cystathionine gamma-s 99.8 1.4E-17 3.1E-22 167.5 17.7 169 142-342 59-233 (388)
78 TIGR01329 cysta_beta_ly_E cyst 99.8 1.6E-17 3.4E-22 166.6 17.5 168 142-342 45-218 (378)
79 PRK05957 aspartate aminotransf 99.8 2.1E-16 4.6E-21 158.7 25.4 239 80-344 5-259 (389)
80 cd00613 GDC-P Glycine cleavage 99.8 7.7E-17 1.7E-21 161.6 22.2 163 148-329 64-241 (398)
81 TIGR01825 gly_Cac_T_rel pyrido 99.8 7.9E-17 1.7E-21 160.8 22.2 224 113-368 47-281 (385)
82 PRK08776 cystathionine gamma-s 99.8 3.2E-17 7E-22 165.8 19.5 169 142-342 58-232 (405)
83 PRK08133 O-succinylhomoserine 99.8 2.2E-17 4.8E-22 166.2 18.2 189 110-329 31-225 (390)
84 PRK06767 methionine gamma-lyas 99.8 1.7E-17 3.6E-22 166.8 17.2 161 142-329 59-225 (386)
85 TIGR00474 selA seryl-tRNA(sec) 99.8 6.4E-17 1.4E-21 165.3 21.6 227 112-370 91-337 (454)
86 cd00614 CGS_like CGS_like: Cys 99.8 2.3E-17 5E-22 164.8 17.8 169 142-342 38-212 (369)
87 PRK09276 LL-diaminopimelate am 99.8 2E-16 4.3E-21 158.4 24.5 237 81-342 6-263 (385)
88 PRK06290 aspartate aminotransf 99.8 1.9E-16 4.2E-21 160.4 24.7 235 84-344 20-277 (410)
89 PRK07681 aspartate aminotransf 99.8 3.4E-16 7.4E-21 157.7 26.2 238 80-343 6-264 (399)
90 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.9E-16 4.2E-21 158.6 24.1 190 115-341 10-204 (376)
91 TIGR03812 tyr_de_CO2_Arch tyro 99.8 1.3E-16 2.9E-21 158.4 22.8 241 112-381 30-295 (373)
92 PRK08068 transaminase; Reviewe 99.8 2.9E-16 6.4E-21 157.5 25.4 238 82-344 8-266 (389)
93 PRK07550 hypothetical protein; 99.8 5.7E-16 1.2E-20 155.2 27.5 206 113-344 42-262 (386)
94 PRK04311 selenocysteine syntha 99.8 1.7E-16 3.6E-21 162.6 23.8 227 111-369 95-341 (464)
95 PRK06207 aspartate aminotransf 99.8 1.8E-16 3.8E-21 160.3 23.8 208 113-343 53-276 (405)
96 PRK08912 hypothetical protein; 99.8 3.9E-16 8.6E-21 156.4 26.1 237 80-343 5-257 (387)
97 PRK07504 O-succinylhomoserine 99.8 1.7E-17 3.8E-22 167.4 16.3 168 133-329 56-229 (398)
98 PRK08114 cystathionine beta-ly 99.8 1.9E-17 4.1E-22 166.4 16.4 166 134-328 54-227 (395)
99 TIGR01324 cysta_beta_ly_B cyst 99.8 3.5E-17 7.6E-22 164.0 18.3 166 134-328 42-213 (377)
100 PRK07777 aminotransferase; Val 99.8 3.5E-16 7.6E-21 156.8 25.4 234 82-342 5-256 (387)
101 PRK07810 O-succinylhomoserine 99.8 2.4E-17 5.3E-22 166.6 17.0 167 134-329 62-234 (403)
102 PRK15029 arginine decarboxylas 99.8 2.4E-17 5.2E-22 176.1 17.8 200 152-369 209-440 (755)
103 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 2.3E-16 5.1E-21 155.1 23.6 236 107-377 3-262 (355)
104 PRK07503 methionine gamma-lyas 99.7 2.7E-17 5.8E-22 166.3 17.2 167 142-341 63-235 (403)
105 PRK06234 methionine gamma-lyas 99.7 3.4E-17 7.4E-22 165.4 17.5 167 142-341 62-236 (400)
106 TIGR01325 O_suc_HS_sulf O-succ 99.7 3.2E-17 6.9E-22 164.5 17.0 174 134-342 46-225 (380)
107 PRK09028 cystathionine beta-ly 99.7 3.8E-17 8.1E-22 164.4 17.5 160 142-328 59-224 (394)
108 PRK07324 transaminase; Validat 99.7 1.4E-16 3.1E-21 159.2 21.3 198 113-344 39-248 (373)
109 PLN02656 tyrosine transaminase 99.7 3.1E-16 6.8E-21 158.6 23.8 232 112-365 47-294 (409)
110 PRK05968 hypothetical protein; 99.7 2.9E-17 6.2E-22 165.3 16.0 173 134-342 55-233 (389)
111 PLN02242 methionine gamma-lyas 99.7 4.5E-17 9.8E-22 165.3 17.5 169 142-342 74-248 (418)
112 PLN02483 serine palmitoyltrans 99.7 1.7E-16 3.8E-21 164.1 21.9 232 103-368 101-359 (489)
113 PRK08045 cystathionine gamma-s 99.7 5.2E-17 1.1E-21 163.3 17.4 174 134-341 44-223 (386)
114 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.6E-16 3.4E-21 160.3 20.8 215 140-377 67-315 (450)
115 PRK05613 O-acetylhomoserine am 99.7 3.9E-17 8.4E-22 166.5 16.7 191 108-328 37-233 (437)
116 PRK07269 cystathionine gamma-s 99.7 4E-17 8.7E-22 162.9 16.3 172 133-341 45-222 (364)
117 PRK07050 cystathionine beta-ly 99.7 6.4E-17 1.4E-21 163.1 17.5 176 133-342 56-237 (394)
118 PRK06176 cystathionine gamma-s 99.7 4.6E-17 1E-21 163.4 16.4 174 133-341 41-220 (380)
119 PRK06348 aspartate aminotransf 99.7 8.3E-16 1.8E-20 154.1 25.2 242 76-344 3-260 (384)
120 PRK08249 cystathionine gamma-s 99.7 7.1E-17 1.5E-21 163.0 17.5 167 142-341 62-234 (398)
121 PLN00145 tyrosine/nicotianamin 99.7 5.6E-16 1.2E-20 157.9 24.3 196 112-327 68-277 (430)
122 PRK07309 aromatic amino acid a 99.7 1.3E-15 2.8E-20 153.2 26.4 208 111-343 41-262 (391)
123 PRK13355 bifunctional HTH-doma 99.7 7E-16 1.5E-20 160.7 25.1 225 79-327 119-368 (517)
124 PRK08134 O-acetylhomoserine am 99.7 5.7E-17 1.2E-21 165.2 16.5 165 133-326 55-225 (433)
125 TIGR01814 kynureninase kynuren 99.7 1.9E-16 4.1E-21 160.0 19.9 245 105-372 29-307 (406)
126 PLN02955 8-amino-7-oxononanoat 99.7 1.8E-16 3.9E-21 161.6 19.6 236 105-371 104-370 (476)
127 PRK08361 aspartate aminotransf 99.7 7.1E-16 1.5E-20 154.9 23.7 236 80-342 11-261 (391)
128 PRK05939 hypothetical protein; 99.7 6.8E-17 1.5E-21 163.0 16.2 157 133-319 38-197 (397)
129 PLN02187 rooty/superroot1 99.7 7.6E-16 1.7E-20 158.3 24.3 195 113-328 83-292 (462)
130 TIGR02080 O_succ_thio_ly O-suc 99.7 1.4E-16 3E-21 160.0 18.3 169 142-342 49-223 (382)
131 PRK14807 histidinol-phosphate 99.7 5E-16 1.1E-20 153.9 21.6 200 111-344 33-239 (351)
132 PRK08064 cystathionine beta-ly 99.7 1.1E-16 2.3E-21 161.2 17.0 169 142-343 52-226 (390)
133 PRK04366 glycine dehydrogenase 99.7 6.3E-16 1.4E-20 159.7 23.1 198 109-329 77-292 (481)
134 PRK08363 alanine aminotransfer 99.7 9E-16 2E-20 154.5 23.5 193 113-326 46-251 (398)
135 PLN02724 Molybdenum cofactor s 99.7 3.1E-16 6.8E-21 171.1 21.6 242 109-371 41-337 (805)
136 PRK08247 cystathionine gamma-s 99.7 1.3E-16 2.8E-21 159.4 17.1 174 133-341 43-222 (366)
137 TIGR01788 Glu-decarb-GAD gluta 99.7 8E-16 1.7E-20 156.5 23.1 200 111-329 50-277 (431)
138 TIGR01821 5aminolev_synth 5-am 99.7 5.7E-16 1.2E-20 156.1 21.7 231 107-370 49-297 (402)
139 PLN02368 alanine transaminase 99.7 5.1E-16 1.1E-20 157.1 21.1 177 148-343 111-320 (407)
140 PRK09064 5-aminolevulinate syn 99.7 8.3E-16 1.8E-20 155.1 22.6 230 107-369 50-297 (407)
141 PRK08636 aspartate aminotransf 99.7 2.1E-15 4.5E-20 152.3 25.3 207 114-343 47-273 (403)
142 TIGR03537 DapC succinyldiamino 99.7 1.6E-15 3.4E-20 150.2 23.9 206 111-343 11-231 (350)
143 PRK07671 cystathionine beta-ly 99.7 2.1E-16 4.6E-21 158.4 17.8 174 134-342 42-221 (377)
144 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 8.5E-16 1.8E-20 153.8 22.0 164 153-341 36-203 (375)
145 PRK09147 succinyldiaminopimela 99.7 1.9E-15 4.2E-20 152.0 24.6 233 83-342 5-269 (396)
146 PRK06225 aspartate aminotransf 99.7 2E-15 4.3E-20 151.0 24.5 230 84-343 7-250 (380)
147 PRK06460 hypothetical protein; 99.7 2.9E-16 6.3E-21 157.4 18.3 169 142-343 43-217 (376)
148 PRK05764 aspartate aminotransf 99.7 3.3E-15 7.3E-20 149.7 25.9 238 80-344 5-264 (393)
149 PLN02509 cystathionine beta-ly 99.7 2.3E-16 5E-21 161.7 17.7 160 142-329 131-296 (464)
150 PRK13392 5-aminolevulinate syn 99.7 6.4E-16 1.4E-20 156.2 20.8 229 108-369 51-297 (410)
151 cd01494 AAT_I Aspartate aminot 99.7 3.2E-16 6.9E-21 136.8 16.1 163 153-327 5-170 (170)
152 PRK09148 aminotransferase; Val 99.7 3E-15 6.4E-20 151.3 25.0 237 82-343 6-263 (405)
153 PRK07682 hypothetical protein; 99.7 1.3E-15 2.7E-20 152.2 21.6 214 104-343 22-251 (378)
154 PRK06702 O-acetylhomoserine am 99.7 2.7E-16 5.8E-21 159.8 16.4 159 142-326 59-223 (432)
155 PRK13578 ornithine decarboxyla 99.7 9E-17 1.9E-21 170.3 13.4 204 152-369 178-414 (720)
156 TIGR03538 DapC_gpp succinyldia 99.7 2E-15 4.4E-20 151.7 22.6 215 103-343 29-269 (393)
157 PRK06855 aminotransferase; Val 99.7 3E-15 6.4E-20 152.7 23.9 197 112-327 47-258 (433)
158 PRK13393 5-aminolevulinate syn 99.7 3E-15 6.5E-20 151.2 23.3 229 107-368 49-295 (406)
159 PTZ00433 tyrosine aminotransfe 99.7 1.6E-15 3.5E-20 153.6 21.3 193 112-326 49-263 (412)
160 PRK05937 8-amino-7-oxononanoat 99.7 2.3E-15 4.9E-20 150.4 22.1 230 108-369 9-261 (370)
161 PRK05967 cystathionine beta-ly 99.7 2.6E-16 5.6E-21 158.3 15.2 161 141-328 61-227 (395)
162 PRK15407 lipopolysaccharide bi 99.7 5.5E-15 1.2E-19 151.0 25.1 168 145-340 64-242 (438)
163 PRK06107 aspartate aminotransf 99.7 3.3E-15 7.2E-20 150.7 23.2 204 113-343 46-266 (402)
164 PLN03026 histidinol-phosphate 99.7 7.6E-16 1.6E-20 154.4 18.3 206 103-345 53-267 (380)
165 PRK03317 histidinol-phosphate 99.7 1.7E-15 3.7E-20 150.9 20.3 212 105-344 29-254 (368)
166 PLN00143 tyrosine/nicotianamin 99.7 5.5E-15 1.2E-19 149.6 24.3 196 112-327 48-257 (409)
167 PRK07683 aminotransferase A; V 99.7 5.2E-15 1.1E-19 148.6 23.8 235 81-342 7-257 (387)
168 PLN02822 serine palmitoyltrans 99.7 2.9E-15 6.4E-20 154.7 22.2 220 114-367 124-363 (481)
169 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 4.8E-16 1E-20 155.9 15.8 176 132-341 45-228 (386)
170 PLN02721 threonine aldolase 99.7 2.8E-15 6.1E-20 147.5 20.9 191 113-328 17-222 (353)
171 PRK05355 3-phosphoserine/phosp 99.7 9.1E-16 2E-20 153.0 17.3 240 105-374 5-262 (360)
172 PRK06084 O-acetylhomoserine am 99.7 5.8E-16 1.2E-20 157.6 15.9 166 134-328 50-221 (425)
173 COG0626 MetC Cystathionine bet 99.7 1.2E-15 2.6E-20 152.2 17.4 175 133-340 54-234 (396)
174 PRK08248 O-acetylhomoserine am 99.7 7.3E-16 1.6E-20 157.0 16.1 160 142-328 62-227 (431)
175 PRK08175 aminotransferase; Val 99.7 1.4E-14 3E-19 145.8 25.1 204 114-343 43-262 (395)
176 TIGR01264 tyr_amTase_E tyrosin 99.7 8.8E-15 1.9E-19 147.5 23.5 194 112-328 47-256 (401)
177 TIGR01265 tyr_nico_aTase tyros 99.7 1.9E-14 4.1E-19 145.3 25.9 198 111-328 46-257 (403)
178 PTZ00377 alanine aminotransfer 99.7 9.9E-15 2.1E-19 150.8 24.3 206 114-344 89-329 (481)
179 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 6.7E-16 1.5E-20 156.8 15.2 160 142-328 55-219 (418)
180 PRK03080 phosphoserine aminotr 99.7 1.3E-15 2.7E-20 152.8 16.6 226 104-370 13-267 (378)
181 PRK06434 cystathionine gamma-l 99.7 7.5E-16 1.6E-20 154.6 14.8 172 133-341 55-232 (384)
182 PRK05994 O-acetylhomoserine am 99.7 1.2E-15 2.6E-20 155.3 16.5 158 142-326 61-224 (427)
183 PRK15481 transcriptional regul 99.7 6.3E-15 1.4E-19 150.0 21.7 195 115-343 100-306 (431)
184 PRK07812 O-acetylhomoserine am 99.7 1E-15 2.2E-20 156.1 15.6 160 142-327 67-232 (436)
185 TIGR01141 hisC histidinol-phos 99.7 2.8E-15 6E-20 147.7 18.3 197 111-343 30-235 (346)
186 cd06450 DOPA_deC_like DOPA dec 99.7 1.2E-15 2.5E-20 149.9 15.3 171 144-327 34-230 (345)
187 TIGR03531 selenium_SpcS O-phos 99.7 2.6E-14 5.7E-19 145.4 25.3 183 146-343 103-298 (444)
188 PRK09265 aminotransferase AlaT 99.7 2.6E-14 5.7E-19 144.2 25.3 190 114-327 50-255 (404)
189 cd00609 AAT_like Aspartate ami 99.7 2E-14 4.4E-19 140.0 23.4 213 146-379 38-264 (350)
190 KOG2862 Alanine-glyoxylate ami 99.7 9.4E-15 2E-19 138.3 19.9 238 106-373 20-281 (385)
191 PRK10534 L-threonine aldolase; 99.7 3.7E-15 8.1E-20 146.1 18.1 200 114-344 12-221 (333)
192 PRK07049 methionine gamma-lyas 99.7 3.6E-15 7.8E-20 151.8 18.2 170 142-342 81-266 (427)
193 PRK04870 histidinol-phosphate 99.7 4.3E-15 9.3E-20 147.2 18.1 209 103-344 27-243 (356)
194 PLN02414 glycine dehydrogenase 99.6 2.6E-15 5.7E-20 164.5 17.4 164 148-329 568-750 (993)
195 cd00611 PSAT_like Phosphoserin 99.6 2.8E-15 6E-20 149.1 15.4 236 105-373 1-258 (355)
196 PRK07568 aspartate aminotransf 99.6 7.2E-14 1.6E-18 140.3 25.7 199 113-341 43-259 (397)
197 COG0076 GadB Glutamate decarbo 99.6 1.2E-14 2.5E-19 148.8 20.0 251 109-382 69-350 (460)
198 PRK05387 histidinol-phosphate 99.6 7.3E-15 1.6E-19 145.1 18.0 200 104-343 26-235 (353)
199 PRK02731 histidinol-phosphate 99.6 8.9E-15 1.9E-19 145.3 18.6 203 104-343 34-250 (367)
200 TIGR01364 serC_1 phosphoserine 99.6 7.3E-15 1.6E-19 145.9 17.4 232 113-373 2-250 (349)
201 PLN02376 1-aminocyclopropane-1 99.6 7.1E-15 1.5E-19 152.3 17.9 174 148-341 98-303 (496)
202 TIGR03799 NOD_PanD_pyr putativ 99.6 3.2E-14 6.9E-19 147.9 22.6 220 143-381 124-407 (522)
203 PRK07582 cystathionine gamma-l 99.6 4.8E-15 1E-19 148.1 15.9 164 142-341 49-218 (366)
204 PRK03321 putative aminotransfe 99.6 8.2E-15 1.8E-19 144.9 17.4 203 105-343 25-241 (352)
205 PRK00950 histidinol-phosphate 99.6 8.9E-15 1.9E-19 144.9 17.4 203 105-344 37-249 (361)
206 PRK09105 putative aminotransfe 99.6 2.4E-14 5.2E-19 143.1 20.3 199 105-343 46-258 (370)
207 PRK08153 histidinol-phosphate 99.6 3.3E-14 7.1E-19 141.9 21.0 220 105-364 35-266 (369)
208 PRK03158 histidinol-phosphate 99.6 1.5E-14 3.2E-19 143.4 18.2 203 105-344 32-248 (359)
209 PRK02610 histidinol-phosphate 99.6 2.7E-14 5.8E-19 142.8 20.2 204 112-344 40-260 (374)
210 PRK01533 histidinol-phosphate 99.6 1.7E-14 3.6E-19 144.1 18.6 203 104-344 31-248 (366)
211 PLN02231 alanine transaminase 99.6 3.6E-14 7.7E-19 148.3 21.8 215 105-343 132-380 (534)
212 PRK07865 N-succinyldiaminopime 99.6 3.7E-14 8.1E-19 141.0 21.0 225 79-343 3-248 (364)
213 PRK15400 lysine decarboxylase 99.6 2.9E-15 6.3E-20 158.8 13.6 197 152-369 199-418 (714)
214 PRK05839 hypothetical protein; 99.6 9.6E-14 2.1E-18 138.9 23.2 198 113-343 37-257 (374)
215 PLN02450 1-aminocyclopropane-1 99.6 2.7E-14 5.9E-19 147.1 19.5 205 104-329 40-289 (468)
216 PRK09275 aspartate aminotransf 99.6 2.4E-14 5.2E-19 148.5 18.2 199 109-329 109-328 (527)
217 PRK09257 aromatic amino acid a 99.6 4.4E-14 9.5E-19 142.2 19.4 193 116-326 47-260 (396)
218 PRK15399 lysine decarboxylase 99.6 1.7E-14 3.7E-19 153.0 17.0 196 152-369 199-418 (713)
219 PRK00451 glycine dehydrogenase 99.6 8.1E-14 1.7E-18 142.5 21.2 158 153-329 117-285 (447)
220 COG2873 MET17 O-acetylhomoseri 99.6 8.2E-15 1.8E-19 141.9 12.9 167 132-327 52-224 (426)
221 PRK05166 histidinol-phosphate 99.6 4.9E-14 1.1E-18 140.6 18.9 204 105-343 39-257 (371)
222 PRK07590 L,L-diaminopimelate a 99.6 1.2E-13 2.6E-18 139.8 21.5 201 104-329 36-266 (409)
223 KOG0053 Cystathionine beta-lya 99.6 1.5E-14 3.3E-19 143.2 14.1 175 134-342 69-249 (409)
224 PF06838 Met_gamma_lyase: Meth 99.6 3.4E-14 7.3E-19 137.9 16.1 201 116-348 27-254 (403)
225 PF00155 Aminotran_1_2: Aminot 99.6 3.9E-14 8.5E-19 140.1 17.0 211 114-347 19-250 (363)
226 PRK14809 histidinol-phosphate 99.6 7.6E-14 1.7E-18 138.4 18.9 204 105-343 33-247 (357)
227 COG1982 LdcC Arginine/lysine/o 99.6 8.9E-15 1.9E-19 149.9 12.3 198 153-367 75-283 (557)
228 PLN02263 serine decarboxylase 99.6 6.1E-13 1.3E-17 135.7 25.6 216 146-381 131-369 (470)
229 PRK08056 threonine-phosphate d 99.6 9.8E-14 2.1E-18 137.7 19.4 201 105-342 23-237 (356)
230 TIGR03801 asp_4_decarbox aspar 99.6 8.8E-14 1.9E-18 144.2 19.5 170 148-329 133-327 (521)
231 TIGR03539 DapC_actino succinyl 99.6 3E-13 6.6E-18 134.3 22.6 199 105-343 24-242 (357)
232 PRK06836 aspartate aminotransf 99.6 2.9E-13 6.4E-18 136.2 22.5 195 113-329 46-261 (394)
233 PLN02672 methionine S-methyltr 99.6 2.2E-13 4.7E-18 150.1 22.2 210 105-342 700-935 (1082)
234 PF01212 Beta_elim_lyase: Beta 99.6 7.8E-15 1.7E-19 141.9 9.7 194 109-329 3-210 (290)
235 PTZ00376 aspartate aminotransf 99.6 8.4E-14 1.8E-18 140.7 17.6 167 141-325 72-264 (404)
236 COG1167 ARO8 Transcriptional r 99.6 2.9E-13 6.2E-18 139.2 21.7 175 148-343 136-323 (459)
237 PLN02397 aspartate transaminas 99.6 1.2E-13 2.7E-18 140.4 18.6 172 141-325 91-282 (423)
238 PRK04781 histidinol-phosphate 99.6 1.3E-13 2.8E-18 137.5 17.6 174 154-346 65-248 (364)
239 PRK03967 histidinol-phosphate 99.5 3.4E-13 7.3E-18 133.1 19.2 201 105-344 21-230 (337)
240 TIGR00461 gcvP glycine dehydro 99.5 3.2E-13 6.8E-18 146.9 19.2 165 147-329 529-712 (939)
241 KOG0259 Tyrosine aminotransfer 99.5 1.1E-12 2.5E-17 127.2 20.6 246 110-380 75-338 (447)
242 PRK05367 glycine dehydrogenase 99.5 4.7E-13 1E-17 147.3 20.0 164 148-329 542-724 (954)
243 PRK01688 histidinol-phosphate 99.5 9.1E-14 2E-18 137.9 12.9 170 153-346 62-241 (351)
244 PF00282 Pyridoxal_deC: Pyrido 99.5 1.2E-12 2.5E-17 131.3 20.8 178 142-329 73-278 (373)
245 PRK12566 glycine dehydrogenase 99.5 1.5E-13 3.3E-18 148.6 15.4 158 145-321 541-711 (954)
246 PLN02607 1-aminocyclopropane-1 99.5 6.5E-13 1.4E-17 136.1 19.2 176 148-343 99-305 (447)
247 PLN02880 tyrosine decarboxylas 99.5 1.6E-13 3.4E-18 142.0 14.8 176 144-329 118-323 (490)
248 KOG1359 Glycine C-acetyltransf 99.5 7.4E-14 1.6E-18 131.4 11.0 218 103-356 67-299 (417)
249 TIGR01366 serC_3 phosphoserine 99.5 1.8E-13 3.9E-18 136.5 13.9 235 105-370 5-256 (361)
250 PRK07392 threonine-phosphate d 99.5 1.5E-12 3.1E-17 129.5 20.2 202 105-344 25-242 (360)
251 PLN02452 phosphoserine transam 99.5 5.9E-13 1.3E-17 132.9 16.7 241 104-373 8-265 (365)
252 COG0079 HisC Histidinol-phosph 99.5 1.9E-12 4E-17 128.9 20.0 206 104-347 24-241 (356)
253 PRK01278 argD acetylornithine 99.5 1.5E-12 3.3E-17 130.6 19.4 227 114-372 48-296 (389)
254 PRK04635 histidinol-phosphate 99.5 2.8E-13 6E-18 134.4 13.6 164 155-343 67-239 (354)
255 TIGR02617 tnaA_trp_ase tryptop 99.5 2.6E-12 5.6E-17 129.1 20.4 239 113-377 54-331 (467)
256 TIGR03542 DAPAT_plant LL-diami 99.5 6.7E-12 1.5E-16 126.7 23.5 198 105-329 36-263 (402)
257 COG2008 GLY1 Threonine aldolas 99.5 1.3E-12 2.7E-17 126.9 17.1 205 109-343 5-223 (342)
258 PRK06358 threonine-phosphate d 99.5 1.6E-12 3.6E-17 129.0 18.1 203 105-344 22-240 (354)
259 PRK07505 hypothetical protein; 99.5 6.8E-12 1.5E-16 126.6 22.8 228 115-373 62-305 (402)
260 KOG1360 5-aminolevulinate synt 99.5 1.2E-12 2.6E-17 127.6 15.6 238 103-373 171-426 (570)
261 PRK08637 hypothetical protein; 99.5 4.7E-12 1E-16 127.2 19.7 172 141-327 44-242 (388)
262 PLN02590 probable tyrosine dec 99.4 1E-11 2.2E-16 129.4 21.4 177 143-329 165-371 (539)
263 PRK07908 hypothetical protein; 99.4 1.4E-11 3.1E-16 121.8 21.0 198 103-344 23-230 (349)
264 PRK09440 avtA valine--pyruvate 99.4 7.9E-12 1.7E-16 126.5 19.4 177 148-343 78-273 (416)
265 PRK00854 rocD ornithine--oxo-a 99.4 2.3E-11 5E-16 122.6 22.6 218 115-372 59-309 (401)
266 TIGR00707 argD acetylornithine 99.4 1.8E-11 3.9E-16 121.9 20.6 228 114-373 44-292 (379)
267 TIGR01140 L_thr_O3P_dcar L-thr 99.4 6.5E-12 1.4E-16 123.5 16.8 158 153-343 52-219 (330)
268 cd00610 OAT_like Acetyl ornith 99.4 2.9E-11 6.3E-16 121.8 21.5 231 114-372 53-314 (413)
269 COG1003 GcvP Glycine cleavage 99.4 2.7E-12 5.8E-17 126.7 13.0 163 148-329 109-288 (496)
270 COG1921 SelA Selenocysteine sy 99.4 2.6E-11 5.7E-16 119.8 18.7 230 110-371 35-273 (395)
271 PRK14808 histidinol-phosphate 99.4 2.1E-11 4.5E-16 120.3 18.0 195 105-344 22-228 (335)
272 PRK03244 argD acetylornithine 99.4 9.5E-11 2.1E-15 118.0 22.0 234 115-377 61-309 (398)
273 PRK08354 putative aminotransfe 99.4 1.9E-11 4.1E-16 119.2 15.9 176 105-326 11-196 (311)
274 PRK05664 threonine-phosphate d 99.3 2E-11 4.3E-16 120.1 15.9 154 155-345 56-219 (330)
275 PRK06425 histidinol-phosphate 99.3 2.1E-11 4.5E-16 120.0 15.4 160 154-343 46-218 (332)
276 PRK04073 rocD ornithine--oxo-a 99.3 1.2E-10 2.6E-15 117.5 20.8 227 114-372 57-308 (396)
277 PRK02627 acetylornithine amino 99.3 1E-10 2.3E-15 117.3 20.0 225 115-372 57-303 (396)
278 PTZ00125 ornithine aminotransf 99.3 1.7E-10 3.6E-15 116.1 20.5 229 114-373 48-301 (400)
279 PRK05093 argD bifunctional N-s 99.3 2.2E-10 4.7E-15 115.8 20.9 226 114-372 57-305 (403)
280 PRK12462 phosphoserine aminotr 99.3 1.2E-10 2.6E-15 115.8 18.4 243 102-370 3-259 (364)
281 TIGR03246 arg_catab_astC succi 99.3 2.7E-10 5.8E-15 115.1 20.5 226 115-372 53-300 (397)
282 PF03841 SelA: L-seryl-tRNA se 99.3 7E-12 1.5E-16 122.9 8.5 190 155-371 54-263 (367)
283 PRK02936 argD acetylornithine 99.3 1.9E-10 4.2E-15 114.8 18.3 227 114-372 46-288 (377)
284 COG1103 Archaea-specific pyrid 99.3 7.8E-10 1.7E-14 103.5 20.0 225 109-367 24-278 (382)
285 TIGR01885 Orn_aminotrans ornit 99.2 1.3E-09 2.8E-14 110.0 22.9 223 114-373 54-309 (401)
286 KOG1368 Threonine aldolase [Am 99.2 9.1E-11 2E-15 110.9 13.2 188 114-329 34-240 (384)
287 KOG1357 Serine palmitoyltransf 99.2 1.5E-10 3.3E-15 114.7 14.9 233 114-383 156-414 (519)
288 COG4100 Cystathionine beta-lya 99.2 1.7E-10 3.8E-15 109.1 14.3 165 147-329 68-251 (416)
289 TIGR00713 hemL glutamate-1-sem 99.2 1.2E-09 2.7E-14 111.0 21.2 224 113-372 64-318 (423)
290 PRK06959 putative threonine-ph 99.2 3.6E-10 7.8E-15 111.7 15.6 158 154-346 59-226 (339)
291 PRK12381 bifunctional succinyl 99.2 2.2E-09 4.7E-14 108.8 21.5 224 115-372 57-304 (406)
292 TIGR01365 serC_2 phosphoserine 99.2 2.6E-10 5.7E-15 114.2 14.5 199 142-370 34-258 (374)
293 TIGR03811 tyr_de_CO2_Ent tyros 99.2 3.4E-09 7.4E-14 111.8 23.0 175 143-329 118-399 (608)
294 PRK08117 4-aminobutyrate amino 99.1 1E-08 2.2E-13 104.8 20.8 231 114-372 60-328 (433)
295 PRK03715 argD acetylornithine 99.1 1.2E-08 2.6E-13 103.1 20.1 229 115-376 54-303 (395)
296 PLN00144 acetylornithine trans 99.1 8.9E-09 1.9E-13 103.6 18.7 233 115-378 33-294 (382)
297 PLN02624 ornithine-delta-amino 99.1 2.3E-08 5E-13 103.4 22.0 227 115-372 93-346 (474)
298 PRK00062 glutamate-1-semialdeh 99.1 1.2E-08 2.7E-13 104.0 19.4 230 113-372 66-320 (426)
299 COG3844 Kynureninase [Amino ac 99.0 5.9E-09 1.3E-13 100.0 14.9 198 149-367 77-299 (407)
300 COG0001 HemL Glutamate-1-semia 99.0 2.8E-08 6.2E-13 99.5 20.2 226 115-370 71-321 (432)
301 PRK04260 acetylornithine amino 99.0 3.7E-08 8E-13 98.5 20.5 185 171-373 87-287 (375)
302 KOG0256 1-aminocyclopropane-1- 99.0 1.9E-08 4E-13 99.1 17.5 202 140-359 120-345 (471)
303 COG4992 ArgD Ornithine/acetylo 99.0 2.3E-08 5.1E-13 99.2 17.8 231 115-377 60-310 (404)
304 PLN02414 glycine dehydrogenase 99.0 8.7E-09 1.9E-13 113.8 15.8 189 111-329 114-315 (993)
305 PRK04013 argD acetylornithine/ 99.0 4.9E-08 1.1E-12 97.6 19.8 228 115-380 42-286 (364)
306 PRK04612 argD acetylornithine 99.0 4.8E-08 1.1E-12 99.1 19.6 231 115-373 58-309 (408)
307 PRK05367 glycine dehydrogenase 98.9 1.8E-08 4E-13 111.4 16.8 152 152-329 125-287 (954)
308 PRK00615 glutamate-1-semialdeh 98.9 1.6E-07 3.5E-12 96.1 22.2 231 114-372 70-324 (433)
309 PRK05964 adenosylmethionine--8 98.9 6.7E-08 1.4E-12 98.5 19.4 235 115-378 60-334 (423)
310 COG1448 TyrB Aspartate/tyrosin 98.9 7E-08 1.5E-12 94.7 18.4 271 89-381 12-320 (396)
311 PRK12403 putative aminotransfe 98.9 1.6E-07 3.5E-12 96.8 22.1 231 114-372 71-348 (460)
312 PRK08088 4-aminobutyrate amino 98.9 1.5E-07 3.3E-12 95.9 21.3 234 115-372 59-320 (425)
313 TIGR03372 putres_am_tran putre 98.9 2.4E-07 5.1E-12 95.0 22.6 232 114-374 92-350 (442)
314 PRK09792 4-aminobutyrate trans 98.9 4E-07 8.8E-12 92.8 23.3 231 114-372 57-319 (421)
315 COG3977 Alanine-alpha-ketoisov 98.9 9.1E-08 2E-12 91.0 16.8 229 91-341 17-271 (417)
316 PRK08360 4-aminobutyrate amino 98.9 6.2E-07 1.3E-11 92.0 23.5 232 114-373 58-326 (443)
317 PLN02760 4-aminobutyrate:pyruv 98.9 2.8E-07 6.1E-12 96.0 21.2 238 114-378 106-395 (504)
318 PRK07046 aminotransferase; Val 98.9 4.1E-07 8.9E-12 93.6 22.1 222 115-373 93-347 (453)
319 PLN02482 glutamate-1-semialdeh 98.9 4.2E-07 9E-12 94.0 22.1 231 115-375 117-372 (474)
320 PRK13360 omega amino acid--pyr 98.8 9.7E-07 2.1E-11 90.6 23.9 236 113-377 62-349 (442)
321 PRK06058 4-aminobutyrate amino 98.8 2.1E-07 4.6E-12 95.4 18.5 233 114-373 73-341 (443)
322 PRK06777 4-aminobutyrate amino 98.8 3.8E-07 8.3E-12 92.9 20.2 232 114-373 57-320 (421)
323 PRK09264 diaminobutyrate--2-ox 98.8 3.4E-07 7.4E-12 93.4 19.5 145 175-329 110-284 (425)
324 TIGR00700 GABAtrnsam 4-aminobu 98.8 1E-06 2.2E-11 89.7 22.9 238 114-378 50-324 (420)
325 PRK07495 4-aminobutyrate amino 98.8 5.4E-07 1.2E-11 92.0 20.5 237 114-378 57-325 (425)
326 PRK08593 4-aminobutyrate amino 98.8 8.7E-07 1.9E-11 91.0 22.1 231 115-372 60-328 (445)
327 PRK06209 glutamate-1-semialdeh 98.8 4.9E-07 1.1E-11 92.5 20.0 220 115-372 66-311 (431)
328 PRK11522 putrescine--2-oxoglut 98.8 9.4E-07 2E-11 91.1 21.8 233 114-376 99-359 (459)
329 KOG0634 Aromatic amino acid am 98.8 2.4E-07 5.1E-12 92.0 15.8 188 165-374 122-349 (472)
330 COG0160 GabT 4-aminobutyrate a 98.7 2.4E-06 5.3E-11 86.9 23.0 240 115-378 74-348 (447)
331 PRK06105 aminotransferase; Pro 98.7 2.6E-06 5.7E-11 87.9 23.2 232 114-373 65-348 (460)
332 PRK12389 glutamate-1-semialdeh 98.7 2.4E-06 5.2E-11 87.3 22.2 227 115-373 71-324 (428)
333 PRK07986 adenosylmethionine--8 98.7 1.5E-06 3.3E-11 88.8 20.1 237 114-378 60-338 (428)
334 TIGR00508 bioA adenosylmethion 98.7 2.1E-06 4.5E-11 87.8 20.5 233 113-373 61-336 (427)
335 PRK06918 4-aminobutyrate amino 98.7 2.4E-06 5.2E-11 87.9 21.1 236 114-377 71-345 (451)
336 PRK09221 beta alanine--pyruvat 98.7 3.7E-06 8.1E-11 86.4 22.3 233 114-374 66-349 (445)
337 PRK06541 hypothetical protein; 98.7 3.7E-06 8.1E-11 86.7 22.2 232 115-372 70-347 (460)
338 PRK06062 hypothetical protein; 98.7 3.6E-06 7.9E-11 86.6 21.5 232 114-374 70-340 (451)
339 PRK07482 hypothetical protein; 98.6 3.6E-06 7.7E-11 86.9 20.4 238 114-378 67-355 (461)
340 KOG0258 Alanine aminotransfera 98.6 5.8E-07 1.3E-11 88.2 13.0 202 106-324 80-309 (475)
341 PRK05630 adenosylmethionine--8 98.6 4.1E-06 9E-11 85.5 19.7 125 241-375 191-332 (422)
342 TIGR02407 ectoine_ectB diamino 98.6 3.9E-06 8.4E-11 85.4 19.4 237 114-377 52-321 (412)
343 PRK05769 4-aminobutyrate amino 98.6 1.6E-05 3.5E-10 81.6 23.3 227 115-369 72-338 (441)
344 KOG1383 Glutamate decarboxylas 98.6 1.4E-06 3E-11 87.3 14.8 282 82-383 57-363 (491)
345 TIGR00709 dat 2,4-diaminobutyr 98.6 1.1E-05 2.3E-10 82.9 21.7 100 267-377 228-331 (442)
346 PRK06916 adenosylmethionine--8 98.5 7.9E-06 1.7E-10 84.3 19.5 236 113-376 72-357 (460)
347 PRK06149 hypothetical protein; 98.5 2.7E-05 5.9E-10 87.3 25.1 233 114-374 600-869 (972)
348 PRK07480 putative aminotransfe 98.5 1.8E-05 3.9E-10 81.6 21.9 235 115-376 68-349 (456)
349 PRK06173 adenosylmethionine--8 98.5 1.1E-05 2.3E-10 82.7 20.0 236 114-377 61-339 (429)
350 PRK06943 adenosylmethionine--8 98.5 2.3E-05 5E-10 80.7 22.4 232 114-373 71-351 (453)
351 PF02347 GDC-P: Glycine cleava 98.5 9.1E-07 2E-11 89.6 11.7 152 153-329 115-278 (429)
352 PRK06082 4-aminobutyrate amino 98.5 2.1E-05 4.5E-10 81.2 21.7 236 114-378 88-356 (459)
353 PRK05965 hypothetical protein; 98.5 1.3E-05 2.9E-10 82.6 20.2 232 115-373 64-345 (459)
354 PRK06917 hypothetical protein; 98.5 2.1E-05 4.6E-10 80.9 20.9 232 114-373 48-327 (447)
355 PRK07678 aminotransferase; Val 98.4 2.6E-05 5.5E-10 80.4 21.0 229 115-373 65-342 (451)
356 PRK07481 hypothetical protein; 98.4 3.4E-05 7.5E-10 79.4 21.7 112 251-372 213-342 (449)
357 KOG0633 Histidinol phosphate a 98.4 4E-06 8.7E-11 78.6 13.1 160 171-348 88-257 (375)
358 PRK07030 adenosylmethionine--8 98.4 3E-05 6.5E-10 80.2 20.9 235 114-376 64-348 (466)
359 PRK06148 hypothetical protein; 98.4 2.4E-05 5.1E-10 88.1 21.2 233 115-377 640-912 (1013)
360 PRK08742 adenosylmethionine--8 98.4 4.9E-05 1.1E-09 78.7 22.0 128 239-376 222-369 (472)
361 PF00202 Aminotran_3: Aminotra 98.4 2.2E-05 4.9E-10 77.8 18.1 238 115-374 34-300 (339)
362 PRK06938 diaminobutyrate--2-ox 98.4 2.4E-05 5.3E-10 80.8 18.8 237 114-376 80-355 (464)
363 COG3033 TnaA Tryptophanase [Am 98.4 7.8E-06 1.7E-10 79.7 13.9 212 156-379 87-336 (471)
364 PRK05639 4-aminobutyrate amino 98.4 3.1E-05 6.7E-10 79.9 19.2 231 114-373 70-343 (457)
365 KOG2040 Glycine dehydrogenase 98.4 4.9E-06 1.1E-10 86.2 12.7 159 152-328 586-763 (1001)
366 PRK07483 hypothetical protein; 98.3 5.1E-05 1.1E-09 78.0 20.2 125 241-375 186-329 (443)
367 TIGR00461 gcvP glycine dehydro 98.3 1.1E-05 2.4E-10 88.8 15.8 151 153-329 114-275 (939)
368 PRK07036 hypothetical protein; 98.3 0.00016 3.5E-09 74.8 23.1 122 241-372 207-350 (466)
369 PRK06931 diaminobutyrate--2-ox 98.3 0.00016 3.6E-09 74.6 22.7 99 268-377 248-350 (459)
370 COG0403 GcvP Glycine cleavage 98.2 4.4E-05 9.6E-10 76.2 16.5 156 153-329 125-292 (450)
371 KOG1402 Ornithine aminotransfe 98.2 0.00013 2.8E-09 70.7 18.1 194 114-343 76-301 (427)
372 KOG1358 Serine palmitoyltransf 98.2 1.6E-05 3.4E-10 78.4 12.0 192 109-327 100-316 (467)
373 KOG0629 Glutamate decarboxylas 98.2 4.8E-06 1E-10 82.7 8.5 172 148-329 141-337 (510)
374 TIGR00699 GABAtrns_euk 4-amino 98.1 0.0002 4.4E-09 73.9 19.5 125 239-376 237-374 (464)
375 KOG0628 Aromatic-L-amino-acid/ 98.0 4.6E-05 9.9E-10 76.6 11.3 230 140-380 105-380 (511)
376 KOG1404 Alanine-glyoxylate ami 98.0 0.00012 2.6E-09 72.3 13.6 101 268-379 235-341 (442)
377 TIGR03251 LAT_fam L-lysine 6-t 98.0 0.0004 8.7E-09 71.1 18.0 123 240-372 205-340 (431)
378 KOG1401 Acetylornithine aminot 98.0 0.00047 1E-08 68.6 17.4 238 114-377 73-335 (433)
379 PF05889 SLA_LP_auto_ag: Solub 98.0 2.9E-05 6.3E-10 77.3 9.1 192 142-347 50-251 (389)
380 PRK08297 L-lysine aminotransfe 97.8 0.00086 1.9E-08 69.0 17.6 83 240-327 212-305 (443)
381 PLN02974 adenosylmethionine-8- 97.8 0.0017 3.6E-08 71.4 20.1 122 241-371 567-712 (817)
382 COG1932 SerC Phosphoserine ami 97.8 0.00046 1E-08 67.9 14.1 238 105-372 7-264 (365)
383 COG0161 BioA Adenosylmethionin 97.7 0.0039 8.4E-08 63.6 19.0 93 240-342 200-308 (449)
384 PF12897 Aminotran_MocR: Alani 97.5 0.0036 7.9E-08 62.3 14.9 208 101-329 21-270 (425)
385 PRK12566 glycine dehydrogenase 97.5 0.0028 6E-08 70.0 15.4 150 153-329 129-289 (954)
386 KOG1403 Predicted alanine-glyo 97.4 0.0036 7.8E-08 60.2 13.2 254 102-380 50-341 (452)
387 KOG1411 Aspartate aminotransfe 97.4 0.0034 7.3E-08 61.4 13.0 150 170-329 122-292 (427)
388 PLN02994 1-aminocyclopropane-1 97.3 0.0015 3.3E-08 57.4 9.0 54 148-203 96-152 (153)
389 KOG1412 Aspartate aminotransfe 97.2 0.0039 8.5E-08 60.2 11.2 144 171-324 102-265 (410)
390 KOG1405 4-aminobutyrate aminot 96.1 0.015 3.3E-07 57.1 6.9 119 240-372 255-389 (484)
391 KOG3846 L-kynurenine hydrolase 96.1 0.036 7.9E-07 53.6 9.1 202 153-367 116-349 (465)
392 KOG2040 Glycine dehydrogenase 93.7 0.19 4.2E-06 53.1 7.4 151 154-328 169-327 (1001)
393 KOG2790 Phosphoserine aminotra 92.5 1.5 3.3E-05 42.3 10.7 200 104-329 8-220 (370)
394 KOG3843 Predicted serine hydro 92.4 0.3 6.5E-06 46.6 6.0 185 153-354 62-261 (432)
395 PF04864 Alliinase_C: Allinase 91.6 1.1 2.4E-05 44.3 9.1 175 147-358 46-235 (363)
396 PF04131 NanE: Putative N-acet 79.4 3.7 8E-05 37.3 5.1 72 237-315 51-123 (192)
397 COG3010 NanE Putative N-acetyl 77.6 4.8 0.0001 37.1 5.2 110 238-362 86-199 (229)
398 COG1504 Uncharacterized conser 70.2 8.7 0.00019 31.8 4.5 49 236-285 47-95 (121)
399 TIGR03586 PseI pseudaminic aci 64.0 11 0.00023 37.5 4.7 89 235-328 141-241 (327)
400 PLN02672 methionine S-methyltr 62.3 1.2E+02 0.0026 35.1 13.0 182 89-293 374-571 (1082)
401 cd02067 B12-binding B12 bindin 52.4 40 0.00087 27.5 5.7 43 237-279 36-78 (119)
402 PRK12595 bifunctional 3-deoxy- 49.5 43 0.00093 33.6 6.3 93 235-328 232-341 (360)
403 TIGR01361 DAHP_synth_Bsub phos 48.6 42 0.0009 32.1 5.8 57 235-291 139-206 (260)
404 COG4820 EutJ Ethanolamine util 45.9 49 0.0011 30.7 5.5 88 157-278 133-221 (277)
405 PRK13396 3-deoxy-7-phosphohept 45.5 49 0.0011 33.2 5.9 59 235-293 215-285 (352)
406 PRK13397 3-deoxy-7-phosphohept 45.0 55 0.0012 31.2 5.9 58 235-292 129-197 (250)
407 PRK00945 acetyl-CoA decarbonyl 44.6 1.2E+02 0.0025 27.2 7.7 64 237-300 21-84 (171)
408 cd05126 Mth938 Mth938 domain. 44.3 76 0.0016 26.5 6.1 50 237-287 45-94 (117)
409 TIGR03569 NeuB_NnaB N-acetylne 43.9 32 0.00069 34.1 4.3 90 235-328 140-242 (329)
410 cd00984 DnaB_C DnaB helicase C 43.5 66 0.0014 29.5 6.3 48 237-284 105-168 (242)
411 PRK02261 methylaspartate mutas 41.7 78 0.0017 27.1 5.9 51 224-279 32-82 (137)
412 cd02072 Glm_B12_BD B12 binding 40.6 63 0.0014 27.5 5.1 53 223-280 27-79 (128)
413 PF02310 B12-binding: B12 bind 40.6 40 0.00087 27.3 3.9 52 238-289 38-91 (121)
414 smart00642 Aamy Alpha-amylase 37.9 25 0.00055 31.1 2.4 27 261-287 65-91 (166)
415 TIGR01501 MthylAspMutase methy 36.5 75 0.0016 27.2 5.0 53 223-280 29-81 (134)
416 COG3414 SgaB Phosphotransferas 35.9 1.3E+02 0.0028 24.1 6.0 69 253-328 3-75 (93)
417 cd02071 MM_CoA_mut_B12_BD meth 34.1 97 0.0021 25.6 5.3 41 238-278 37-77 (122)
418 TIGR02370 pyl_corrinoid methyl 34.0 73 0.0016 28.9 4.8 52 223-279 112-163 (197)
419 PF14639 YqgF: Holliday-juncti 32.6 27 0.00058 30.5 1.6 43 237-279 49-91 (150)
420 cd02070 corrinoid_protein_B12- 31.7 1.1E+02 0.0024 27.7 5.6 51 224-279 111-161 (201)
421 PRK09441 cytoplasmic alpha-amy 31.6 33 0.00071 35.6 2.4 28 260-287 75-102 (479)
422 COG1105 FruK Fructose-1-phosph 31.4 1.3E+02 0.0028 29.6 6.3 52 237-288 110-168 (310)
423 PF00128 Alpha-amylase: Alpha 31.1 24 0.00052 33.2 1.2 27 261-287 47-73 (316)
424 COG1091 RfbD dTDP-4-dehydrorha 30.1 1.2E+02 0.0027 29.3 5.9 58 237-297 36-107 (281)
425 COG1184 GCD2 Translation initi 30.0 5.2E+02 0.011 25.3 10.1 96 171-285 122-227 (301)
426 COG2870 RfaE ADP-heptose synth 28.0 1.7E+02 0.0036 30.1 6.4 35 252-286 144-178 (467)
427 PLN02673 quinolinate synthetas 27.8 6.6E+02 0.014 27.6 11.2 99 85-204 253-356 (724)
428 TIGR02026 BchE magnesium-proto 27.8 1.1E+02 0.0023 32.1 5.4 54 236-290 48-103 (497)
429 cd05560 Xcc1710_like Xcc1710_l 26.3 2.2E+02 0.0049 23.2 6.0 49 237-287 39-87 (109)
430 cd00248 Mth938-like Mth938-lik 26.1 2.4E+02 0.0051 23.0 6.2 50 237-287 38-87 (109)
431 KOG1176 Acyl-CoA synthetase [L 25.3 4.7E+02 0.01 27.8 9.7 43 237-285 105-149 (537)
432 cd02069 methionine_synthase_B1 23.8 1.3E+02 0.0028 27.8 4.6 51 224-279 117-167 (213)
433 PRK13398 3-deoxy-7-phosphohept 23.7 1.3E+02 0.0028 28.8 4.8 57 235-291 141-208 (266)
434 PF02571 CbiJ: Precorrin-6x re 23.7 89 0.0019 29.6 3.6 46 236-283 50-97 (249)
435 TIGR00640 acid_CoA_mut_C methy 22.8 2E+02 0.0044 24.3 5.3 52 223-279 30-81 (132)
436 COG1066 Sms Predicted ATP-depe 22.7 1.9E+02 0.0041 29.8 5.7 48 237-284 154-215 (456)
437 PRK11823 DNA repair protein Ra 22.5 1.3E+02 0.0028 31.1 4.8 47 238-284 143-203 (446)
438 cd02065 B12-binding_like B12 b 22.3 1.7E+02 0.0037 23.6 4.7 52 238-289 37-90 (125)
439 PF04413 Glycos_transf_N: 3-De 22.1 2.2E+02 0.0048 25.5 5.7 46 240-290 84-129 (186)
440 PF01248 Ribosomal_L7Ae: Ribos 22.0 1.9E+02 0.004 22.5 4.7 46 240-287 20-66 (95)
441 cd01121 Sms Sms (bacterial rad 21.3 1.5E+02 0.0033 29.9 4.8 47 238-284 145-205 (372)
442 PLN00196 alpha-amylase; Provis 20.9 65 0.0014 33.2 2.2 28 260-287 86-113 (428)
443 KOG0630 Predicted pyridoxal-de 20.7 1.5E+02 0.0032 31.2 4.6 51 236-286 272-330 (838)
444 PTZ00314 inosine-5'-monophosph 20.3 87 0.0019 32.9 3.0 96 182-286 243-351 (495)
No 1
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-84 Score=617.62 Aligned_cols=308 Identities=71% Similarity=1.143 Sum_probs=299.9
Q ss_pred cchhhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 76 ~~~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
..++..+|.+.|||++++|++|+.||+.+|+||+|||++|.+|++|++|+|+|+|+|||||.|||+|++++|++|.+|++
T Consensus 14 ~~~~~~~l~~~DPev~~ii~~Ek~RQ~~gieLIaSENFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~ 93 (477)
T KOG2467|consen 14 IKLGNTPLEEVDPEVHDIIEKEKERQKRGIELIASENFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQK 93 (477)
T ss_pred hhhhcCchhhcChHHHHHHHHHHHhhhcceeEeecccchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC
Q 016668 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (385)
Q Consensus 156 ~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~ 235 (385)
|+.+.||++++.||||||+.|||.||++++.++++|+|+||.+|+++|||++|||+++.++++..+.+|+..||.+|+++
T Consensus 94 RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~T 173 (477)
T KOG2467|consen 94 RALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPST 173 (477)
T ss_pred HHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCcc
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS 315 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~ 315 (385)
|.||||.||+.+..+|||+||+|.|.|++.+|++++++||+++|++|++|+||.+||++.++.|+||++||||++||||+
T Consensus 174 G~IDYD~Le~~A~~frPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKs 253 (477)
T KOG2467|consen 174 GYIDYDKLEKTATLFRPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKS 253 (477)
T ss_pred CceehHHHHHHHHhcCCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccEEEEEEeCCCC---------chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 316 LRGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 316 l~GprgG~I~~~~~~~---------~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
|+|||||+||+++... .+|+++++|++++||++|||||+|+|+|+|+||+++.++||++|++||++|.
T Consensus 254 LRGPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Na 330 (477)
T KOG2467|consen 254 LRGPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNA 330 (477)
T ss_pred ccCCcceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHH
Confidence 9999999999999632 4789999999999999999999999999999999999999999999999984
No 2
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-78 Score=583.59 Aligned_cols=289 Identities=57% Similarity=0.882 Sum_probs=282.4
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~l 160 (385)
..|...||+++++|++|..||+..|+||+|||++|+.|+++++|.|+|+|+|||||.|||+||+++|++|.+|.++++++
T Consensus 5 ~~l~~~d~~i~~~i~~e~~rq~~~ieLIASEN~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~L 84 (413)
T COG0112 5 ASLADYDPEIFEAIQQELERQREHIELIASENFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKL 84 (413)
T ss_pred hhHHhcCHHHHHHHHHHHHHHhhceeeeeccccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCH
Q 016668 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (385)
Q Consensus 161 fg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~ 240 (385)
||+++ +||||+||+.||.+++.+|++|||+||.+++.||||++|++ +++++|..|+.++|++|++++.||+
T Consensus 85 Fga~~----anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~-----~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 85 FGAEY----ANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGS-----PVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred hCCCc----cccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCC-----CCCccceeEEeEecccccccCccCH
Confidence 99998 69999999999999999999999999999999999999995 6789999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCcccc
Q 016668 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (385)
Q Consensus 241 d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gpr 320 (385)
|+++++++++|||+||+|.|.|++.+|++++++||+++|++|++|+||.+||+++|.+|+|+++|||||+||||||+|||
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~AdvVTtTTHKTlrGPr 235 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHADVVTTTTHKTLRGPR 235 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccceEeCCcccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
||+|+++++ ++.++|++++||++||||++|.|||+++|++|+++++|++|++||++|.
T Consensus 236 GG~Il~~~e-----el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NA 293 (413)
T COG0112 236 GGIILTNDE-----ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNA 293 (413)
T ss_pred ceEEEeccH-----HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH
Confidence 999999986 8999999999999999999999999999999999999999999999985
No 3
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=100.00 E-value=3.5e-72 Score=557.05 Aligned_cols=301 Identities=58% Similarity=0.947 Sum_probs=253.0
Q ss_pred cccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC
Q 016668 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (385)
Q Consensus 83 l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg 162 (385)
|++.||++++++++|..||+++|+||||||++||.|++++++.|+|+|+||||+.|||+|++++|++|++|+++++++||
T Consensus 1 l~~~d~ei~~li~~e~~rq~~~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~ 80 (399)
T PF00464_consen 1 LKEFDPEIYELIEKEEERQRSTLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFG 80 (399)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHSEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT
T ss_pred CcccCHHHHHHHHHHHHHHhcCccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHH
Q 016668 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (385)
Q Consensus 163 ~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~ 242 (385)
+++++|+++|++.||+.||++++.+|++|||+||.+++.+|||++|++....+++...|..++.++|++|++++.||+|+
T Consensus 81 ~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~ 160 (399)
T PF00464_consen 81 AEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDE 160 (399)
T ss_dssp -STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHH
T ss_pred CCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHH
Confidence 99889999999999999999999999999999999999999999999866555566688889999999998899999999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEE
Q 016668 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (385)
Q Consensus 243 le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG 322 (385)
+++++++++||+|+++.|+|++.+|+++|++||+++|++|++|++|.+||+++|.+|+||++|||+++||||||+|||||
T Consensus 161 l~~~a~~~kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~ADvvt~sThKtl~GPrgg 240 (399)
T PF00464_consen 161 LEKLAKEHKPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPYADVVTGSTHKTLRGPRGG 240 (399)
T ss_dssp HHHHHHHH--SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCTSSEEEEESSGGG-SSS-E
T ss_pred HHHHHhhcCCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCccccceEEEeeccccccccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCC--------chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 323 MIFFKKDPV--------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 323 ~I~~~~~~~--------~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
+|+++++.. .-+++.++|++++||++||+||+|.+||+|++|+|+++++|++|++||++|.
T Consensus 241 iI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NA 309 (399)
T PF00464_consen 241 IILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNA 309 (399)
T ss_dssp EEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred EEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 999992210 0138999999999999999999999999999999999999999999999985
No 4
>PLN02271 serine hydroxymethyltransferase
Probab=100.00 E-value=7.2e-71 Score=560.71 Aligned_cols=305 Identities=62% Similarity=1.070 Sum_probs=287.4
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
....|++.||+++++|++|+.||+++|+||||||++|+.|+++++++|+|+|+|||||.|||+|++++|++|.+|.++++
T Consensus 125 ~~~~l~~~Dpei~~li~~E~~rQ~~~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~ 204 (586)
T PLN02271 125 GNQPLPEADPDIHELMEKEKQRQFKGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERAL 204 (586)
T ss_pred HhccHhhhCHHHHHHHHHHHHHHhcCeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccc-cccccCcceEEEEeccccCCCCC
Q 016668 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPK-RRVSGTSIYFESMPYRLDESTGL 237 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~-~~~~~~g~~~~~i~~~~~~~~~~ 237 (385)
++||+++++|++||++.||+.||++++.+|++|||+||.++++||||++|+++... .+++..|..++.++|++|++++.
T Consensus 205 ~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~ 284 (586)
T PLN02271 205 AAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGY 284 (586)
T ss_pred HHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCc
Confidence 99999998999999999999999999999999999999999999999999975422 35678899999999999888999
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~ 317 (385)
||+|++++.+..++||+|+++.+.|++.+|+++|++||+++|++|++|+||.+|+++.+.+++|++++|++++|+||||+
T Consensus 285 IDyd~lek~a~~~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLr 364 (586)
T PLN02271 285 IDYDKLEEKALDFRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLR 364 (586)
T ss_pred cCHHHHHHHhhhcCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCC
Confidence 99999999777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEEEeCCCC--------------chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 318 GPRGGMIFFKKDPV--------------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 318 GprgG~I~~~~~~~--------------~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
||+||+|+++++.. ..+++.++|++++||++|||||+|.|||+++|++++..++|++|++||++|.
T Consensus 365 GPrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NA 444 (586)
T PLN02271 365 GPRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNA 444 (586)
T ss_pred CCCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 99999999987421 2357899999999999999999999999999999999999999999999985
No 5
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=8.7e-58 Score=463.19 Aligned_cols=287 Identities=44% Similarity=0.731 Sum_probs=269.3
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~l 160 (385)
..|++.||+++++|++|..||+++|+||||||++|+.|++++++.++|+|+|||||.|||+|++++|++|.+|.++++++
T Consensus 28 ~~l~~~d~~~~~~~~~e~~rq~~~l~LiasEN~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~l 107 (493)
T PRK13580 28 DVILHVEPRIAEAIRQELADQRSSLKLIASENYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKEL 107 (493)
T ss_pred HHHHhhCHHHHHHHHHHHHHHhcCceEecccccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceeecCCcHHHHHHHHHHhccC-------------------------------CCEEeecCCCCCccccCC
Q 016668 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKP-------------------------------HDRIMGLDLPHGGHLSHG 209 (385)
Q Consensus 161 fg~~~~~~~~~V~~~sGs~A~~~a~~all~p-------------------------------GD~Vl~~~~~~ggh~s~~ 209 (385)
||+++ ++|++.||+.||++++.++++| ||+||.+++.+|||++|+
T Consensus 108 f~a~~----anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg 183 (493)
T PRK13580 108 FGAEH----AYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG 183 (493)
T ss_pred hCCCc----ccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC
Confidence 99998 5999999999999999999987 899999999999999999
Q ss_pred ccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEecccc
Q 016668 210 FMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHI 289 (385)
Q Consensus 210 ~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~ 289 (385)
+ ..++.|..++..+|+++++++.+|++++++++++.+|++++++.|++++..|+++|+++|+++|++|++|+||+
T Consensus 184 ~-----~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~~~~~dl~~i~eia~~~gA~L~VD~AH~ 258 (493)
T PRK13580 184 F-----RPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAYPRRVNFAKLREIADEVGAVLMVDMAHF 258 (493)
T ss_pred c-----ccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCccccCCCcCHHHHHHHHHHcCCEEEEECchh
Confidence 6 55678888899999999888999999999999888888999999999999999999999999999999999999
Q ss_pred ccccccCccc---CCCCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 290 SGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 290 ~Gli~~g~~~---~p~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+|++..+..+ +++.++||+++|+||+|+||+||+|++++ ++.+.++++ .|+++|+|+++.++|+++++++
T Consensus 259 ~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~GG~I~~~~------~l~~~L~~a-~P~i~gg~l~p~iAA~avAl~e 331 (493)
T PRK13580 259 AGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRGGLVLAKK------EYADAVDKG-CPLVLGGPLPHVMAAKAVALAE 331 (493)
T ss_pred hceeccccchhhcCCCCCCcEEEeCChhhccCCCeEEEEecH------HHHHHHhhC-CCcccCCCccHHHHHHHHHHHH
Confidence 9999866554 56678999999999999999999999987 688889877 4899999999999999999999
Q ss_pred hhCchHHHHHHHHhccc
Q 016668 367 AQSPEFKVYQNKSACKP 383 (385)
Q Consensus 367 ~~~~~~~~y~~~v~~~~ 383 (385)
+.+++|++|++||++|.
T Consensus 332 ~~~~ef~~y~~~l~~Na 348 (493)
T PRK13580 332 ARTPEFQKYAQQVVDNA 348 (493)
T ss_pred HhCccHHHHHHHHHHHH
Confidence 99999999999999984
No 6
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=5.9e-56 Score=454.71 Aligned_cols=306 Identities=76% Similarity=1.225 Sum_probs=279.7
Q ss_pred hhhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 78 ~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
++...|++.||+++++|++|..||+.+|+||||||++|+.|++++++.++++|++|||++|||+|++++|++|++|++++
T Consensus 10 ~~~~~~~~~d~~~~~~i~~e~~~q~~~l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~ 89 (475)
T PLN03226 10 WGNAPLEEVDPEIADIIEKEKRRQWKGLELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRA 89 (475)
T ss_pred cchhhhhhcCHHHHHHHHHHHHHHHcCeeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHH
Confidence 45566889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCC
Q 016668 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (385)
Q Consensus 158 a~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~ 237 (385)
+++|+.+++.|.++|+++||+.||.+++.+|++|||+|++++..+|||++|++......++..+..++.++|.++++++.
T Consensus 90 ~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~ 169 (475)
T PLN03226 90 LEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGL 169 (475)
T ss_pred HHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCC
Confidence 99999998888889999999999999999999999999999999999999987544334556677778888888888899
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLR 317 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~ 317 (385)
+|+++|++++..++||+|+++.++|++..|+++|+++|+++|++|++|+||++|++..+..++|++++|++++|+||||+
T Consensus 170 iD~d~Le~~l~~~~pklIv~~~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~ 249 (475)
T PLN03226 170 IDYDKLEKKAMLFRPKLIIAGASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLR 249 (475)
T ss_pred cCHHHHHHHHhhcCCeEEEEecCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCccccc
Confidence 99999999997778999988888899999999999999999999999999999999888788888899999999999999
Q ss_pred cccEEEEEEeCCCC--------chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 318 GPRGGMIFFKKDPV--------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 318 GprgG~I~~~~~~~--------~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
||+||+|+++++.+ ..+++.+.++.+.||+++++|+++.++|+++|++++..++|++|++|+++|.
T Consensus 250 GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na 323 (475)
T PLN03226 250 GPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANA 323 (475)
T ss_pred CCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 99999999987522 1125666788899999999999999999999999999999999999999874
No 7
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=100.00 E-value=2.9e-47 Score=389.59 Aligned_cols=302 Identities=69% Similarity=1.135 Sum_probs=264.5
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
+...|++.||++++++.+|.+||+++|+||+|||++||.|++++.+.++++|++|+|+++|+.|++..+.+|+.++++++
T Consensus 11 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a 90 (452)
T PTZ00094 11 LNQSLKEADPELYELIEKEKERQIEGLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRAL 90 (452)
T ss_pred hhhhHhhhCHHHHHHHHHHHHHHHcCeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHH
Confidence 45668899999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCC
Q 016668 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~i 238 (385)
++||+++++|.++++++||+.||.+++.++++|||+|++.+.+||+|++++...........+..++..+++++. ++.+
T Consensus 91 ~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~-~g~i 169 (452)
T PTZ00094 91 EAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE-KGLI 169 (452)
T ss_pred HHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC-CCCc
Confidence 999999877767888899999999999999999999999999999999875321111223345556666777774 4899
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCcc
Q 016668 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (385)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~G 318 (385)
|+++++++++..+|++|+++.+.++...|+++|.++|+++|+++++|++|++|++..+..+.++.++|++++|+||||+|
T Consensus 170 d~~~L~~~l~~~~~~lvi~~~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~G 249 (452)
T PTZ00094 170 DYDKLEELAKAFRPKLIIAGASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRG 249 (452)
T ss_pred CHHHHHHHHHHhCCCEEEEeCCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCC
Confidence 99999999976689998887778999999999999999999999999999999998776677777999999999999999
Q ss_pred ccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 319 prgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
|+||+++++++.. ..+..+++...||.++|+++.+.++|+++|++++...++++|++++.+++
T Consensus 250 P~Gg~l~~~~~~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~ 312 (452)
T PTZ00094 250 PRSGLIFYRKKVK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNA 312 (452)
T ss_pred CCceEEEEecccc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHH
Confidence 9999999977521 13556777788999999999999999999999998888899999988753
No 8
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=2.2e-43 Score=357.33 Aligned_cols=293 Identities=58% Similarity=0.881 Sum_probs=257.7
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016668 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (385)
Q Consensus 77 ~~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~ 156 (385)
.|+++.|++.||+++++|++|..+|.++|+|++|||+++|.|++++.+.+.++|..|++|+|+++|++.+++||++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sen~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~ 82 (416)
T PRK13034 3 FFFSDSLEEYDDEVFAAINKELERQQDHLELIASENFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIER 82 (416)
T ss_pred chhhhhHhhhCHHHHHHHHHHHHHHhcCeeecccccCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred HHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
++++||.++ +.+.+.||+.||.+++.++++|||+|++.+..|+++..+|. .....+..++...+++++.++
T Consensus 83 la~l~g~~~----alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~ 153 (416)
T PRK13034 83 AKQLFGCDY----ANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGA-----KVSLSGKWYNAVQYGVDRLTG 153 (416)
T ss_pred HHHHhCCCc----eEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCC-----cceeccceeeeEEcccccccC
Confidence 999999987 46777899999999999999999999999998888765553 222334444445677776677
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l 316 (385)
.+|++++++.++..+||+|+++.+.++...|+++|.++|+++|++|++|+||+.|+...|..+.++.++|++++|+||+|
T Consensus 154 ~~d~~~le~~l~~~~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l 233 (416)
T PRK13034 154 LIDYDEVEELAKEHKPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTL 233 (416)
T ss_pred CcCHHHHHHHHhhcCCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccC
Confidence 89999999988666789999877889999999999999999999999999999999887776666678999999999999
Q ss_pred ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 317 ~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
+||.||+++++++ ++.++++...|++++++++++.+++++.++.++..+++.+|++++.+|.
T Consensus 234 ~g~~GG~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a 295 (416)
T PRK13034 234 RGPRGGMILTNDE-----EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANA 295 (416)
T ss_pred CCCCCeEEEECcH-----HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHH
Confidence 9999999999875 6777788888998888899999999999999988777788999998774
No 9
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=100.00 E-value=4.8e-38 Score=315.84 Aligned_cols=287 Identities=62% Similarity=0.984 Sum_probs=244.0
Q ss_pred ccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC
Q 016668 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (385)
Q Consensus 84 ~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~ 163 (385)
+++|++++++|.+|..+++++|+|++++|++++.|++++...+..+|..|+++.++|.|.+..+++|+.+++++++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~ 80 (402)
T cd00378 1 ADVDPEIAEIIKKENERQRETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA 80 (402)
T ss_pred CCcCHHHHHHHHHHHHHHHhCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC
Confidence 36899999999999999999999999999999999999999888899999999999999999999999889999999999
Q ss_pred CCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHH
Q 016668 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (385)
Q Consensus 164 ~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~l 243 (385)
++ ..|.++||+.|+..++.++++|||+|++.++.|++|++++... .+...|..+..++++.+++++.+|++++
T Consensus 81 ~~----~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~id~~~l 153 (402)
T cd00378 81 EY----ANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFT---KVSASGKLFESVPYGVDPETGLIDYDAL 153 (402)
T ss_pred Cc----eeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccc---cccccceeEEEecCCcCcccCCcCHHHH
Confidence 86 3577788999999999999999999999999998887764311 1345666566666555433678999999
Q ss_pred HHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEEE
Q 016668 244 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 323 (385)
Q Consensus 244 e~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG~ 323 (385)
++.+...++|+|+++.+++|...|+++|.++|+++|+++++|++|+.|++..|..+.++.++|++++|+||+|+||+||+
T Consensus 154 ~~~i~~~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~~~dv~~~s~sK~l~G~~gg~ 233 (402)
T cd00378 154 EKMALEFKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLPGADVVTTTTHKTLRGPRGGL 233 (402)
T ss_pred HHHHHhCCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcccCCcEEEeccccCCCCCCceE
Confidence 99986568999998888899888999999999999999999999999887766555555578999999999999999999
Q ss_pred EEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
++++++ ++.+++.....++..++++...+++++.++.+....++.++.+++.++
T Consensus 234 i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 287 (402)
T cd00378 234 ILTRKG-----ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVEN 287 (402)
T ss_pred EEeccH-----HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999875 677888777777778888888999999999887765566776666554
No 10
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=100.00 E-value=1e-37 Score=315.34 Aligned_cols=290 Identities=57% Similarity=0.871 Sum_probs=243.3
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
+-.+|++.||+++++|+++..+++..++|++++|++++.|++++...+.++|..|+++++++.|.+..+.+|+.++++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 81 (416)
T PRK00011 2 FMDNLAEYDPEIADAIEQELKRQEEHIELIASENFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAK 81 (416)
T ss_pred cchhhhhcCHHHHHHHHHHHHHHhcCeeeecccCcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999988888898899999999999999999998999999
Q ss_pred HHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCC
Q 016668 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~i 238 (385)
+++|++.. .|.++|||.|+..++.++++|||+|++++++|++|++++. ...+.+...+++.++++.+++.+
T Consensus 82 ~~~g~~~~----~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~ 152 (416)
T PRK00011 82 ELFGAEYA----NVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGS-----PVNFSGKLYNVVSYGVDEETGLI 152 (416)
T ss_pred HHhCCCce----eeecCCchHHHHHHHHHhcCCCCEEEEeccccCCcccccc-----ccccccceeeEeecCcCcccCCc
Confidence 99999873 5667889999999999999999999999999988766542 11222323345555566556789
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCcc
Q 016668 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (385)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~G 318 (385)
|++++++.+++.+||+|+++.+++|...|+++|.++|+++|+++++|++|+.|++..|..+.+++++|++++|+||+|+|
T Consensus 153 d~~~l~~~i~~~~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~~~di~~~S~~K~l~g 232 (416)
T PRK00011 153 DYDEVEKLALEHKPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVPHADVVTTTTHKTLRG 232 (416)
T ss_pred CHHHHHHHHHhcCCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCCCCcEEEecCCcCCCC
Confidence 99999999976579999887778888889999999999999999999999988876555555556889999999999999
Q ss_pred ccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 319 prgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
|+||+++++++ ++.+++....+++..+++..+.++++..++.++..+.+.++.+++.+|
T Consensus 233 ~~gg~i~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~ 291 (416)
T PRK00011 233 PRGGLILTNDE-----ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKN 291 (416)
T ss_pred CCceEEEeCCH-----HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999765 688888877777777788888999988888887755556666666554
No 11
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=1.7e-23 Score=210.90 Aligned_cols=239 Identities=25% Similarity=0.319 Sum_probs=175.8
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC-CCCcceeecCCc-HHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSG-SPANFEVYT 186 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~-~~~~~~V~~~sG-s~A~~~a~~ 186 (385)
+.....|..|++++...+.+.+.+...+ .+.-.....+..+.+|+.+++++|+++ + +|.++.| |.|+..+..
T Consensus 29 aa~~~~p~~V~~a~~~~~~~~~an~~r~--~~~~~~~~t~~~e~aRe~va~~~~a~~~~----eIvft~~tT~aln~va~ 102 (405)
T COG0520 29 AATSQKPQAVLDAVAEYYRRYNANVHRG--AHTLAEEATDLYEAAREAVARFLNADSSD----EIVFTRGTTEALNLVAR 102 (405)
T ss_pred cccccCCHHHHHHHHHHHHhhcCCcCcc--cchHHHHHHHHHHHHHHHHHHHhCCCCCC----eEEEeCChhHHHHHHHH
Confidence 3344468999999988776555433222 122233344455568999999999995 4 4556655 469999999
Q ss_pred Hh---ccCCCEEeecCCCCCccccCCccccccc-cccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 016668 187 AI---LKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (385)
Q Consensus 187 al---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~- 261 (385)
++ +++||+|++.+.+|.++.. +|.. ....|..+++++ ++ +++.+|.|++++.+.+ ++|+|.++..+
T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~-----pw~~~~~~~Ga~v~~i~--~~-~~g~~~~~~~~~~i~~-~Tklvais~vSn 173 (405)
T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIV-----PWQELAKRTGAKVRVIP--LD-DDGLLDLDALEKLITP-KTKLVALSHVSN 173 (405)
T ss_pred HhhhhhcCCCEEEEccCcchhhHH-----HHHHHHHhcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CceEEEEECccc
Confidence 88 7999999999998866543 2222 234577777776 55 5789999999998865 89999886533
Q ss_pred -CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 262 -~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
.|...|+++|+++||++|+++++|++|++|.. +..++ ++|++++|.||||.||.| |+++++++ +.
T Consensus 174 ~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~-----~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~------~l 242 (405)
T COG0520 174 VTGTVNPVKEIAELAHEHGALVLVDAAQAAGHL-----PIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKE------LL 242 (405)
T ss_pred cccccchHHHHHHHHHHcCCEEEEECccccCcc-----CCCchhcCCCEEEEcccccccCCCceEEEEEchH------HH
Confidence 57889999999999999999999999988754 33444 899999999999999988 88888885 43
Q ss_pred HHHh---------------------hccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 338 SAIN---------------------NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 338 ~~i~---------------------~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
+.+. .......-|+|+...+.+++.|++.+...++.
T Consensus 243 ~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~ 299 (405)
T COG0520 243 EELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGME 299 (405)
T ss_pred hhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHH
Confidence 3331 11122234788899999999999987766654
No 12
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.90 E-value=7e-22 Score=198.81 Aligned_cols=233 Identities=18% Similarity=0.144 Sum_probs=170.0
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTA 187 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~a 187 (385)
.++..+|+.+++++...+.+... .|.. ..|.+ +|++.+.+++.+.+|++.+ ...+|..|+|+ +|++.++.+
T Consensus 37 ~Pd~~~p~~i~~a~~~a~~~~~~-~Y~~---~~G~~---~LReaia~~~~~~~~~~~~-~~~eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 37 EPDFPTPEHIIEAAIEALEEGGT-HYTP---SAGIP---ELREAIAEKYKRRYGLDVD-PEEEIIVTAGAKEALFLAFLA 108 (393)
T ss_pred CCCCCCCHHHHHHHHHHHhcccC-CCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCeEEEeCCHHHHHHHHHHH
Confidence 55678899999999887665321 2221 23655 8999999999999996542 22347777776 599999999
Q ss_pred hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 016668 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (385)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~ 265 (385)
+++|||+|++++|.|..|.. .+.+.|.....++....++++.+|+++|++.+++ ++|+|++++|+||+ .
T Consensus 109 ~~~pGDeVlip~P~Y~~y~~--------~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~NPTGav 179 (393)
T COG0436 109 LLNPGDEVLIPDPGYPSYEA--------AVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPNNPTGAV 179 (393)
T ss_pred hcCCCCEEEEeCCCCcCHHH--------HHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCCCCcCcC
Confidence 99999999999996654422 4567787655555322113679999999999987 89999999999984 2
Q ss_pred ---CCHHHHHHHHHHcCcEEEEeccccccccccCc-ccCCCC--C-Cc--EEEECCCccC--ccccEEEEEEeCCCCchh
Q 016668 266 ---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y-CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 266 ---~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~~--g-aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~ 334 (385)
..+++|+++|++||++||+|+++ .++++.+. +++.++ . .| |++.|++|++ +|||.||++++++
T Consensus 180 ~~~~~l~~i~~~a~~~~i~ii~DEiY-~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~----- 253 (393)
T COG0436 180 YSKEELKAIVELAREHDIIIISDEIY-EELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPE----- 253 (393)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEehhh-hhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChH-----
Confidence 35889999999999999999995 88998874 555554 3 24 6789999996 8999999999943
Q ss_pred HHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 335 ~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+.+..-....+.+...+.|+.+ ||+
T Consensus 254 ~l~~~~~~~~~~~~~~~~~~~Q~aa~~-aL~ 283 (393)
T COG0436 254 ELIAALRKLKSYLTSCAPTPAQYAAIA-ALN 283 (393)
T ss_pred HHHHHHHHHHHhcccCCCHHHHHHHHH-Hhc
Confidence 566665533323333456666665544 554
No 13
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.90 E-value=2.7e-22 Score=197.29 Aligned_cols=236 Identities=20% Similarity=0.264 Sum_probs=172.9
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
+..+++.|+|+++|...++..| |+|.+-+..|.+..+.+|+ +++.+++++|+++.+ .+++++||++|++++.+.
T Consensus 8 ~ATTp~~~~v~~~m~~~~~~~f--gNPsS~H~~G~~A~~~ve~-AR~~iA~llga~~~e---IiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 8 AATTPVDPEVLEAMLPYLTEVF--GNPSSLHSFGREARKAVEE-AREQIAKLLGADPEE---IIFTSGATESNNLAIKGA 81 (386)
T ss_pred cccCCCCHHHHHHHHHHHHhhc--CCccchhHhHHHHHHHHHH-HHHHHHHHhCCCCCe---EEEecCCcHHHHHHHHhh
Confidence 4567889999999999988775 7888877668877777776 899999999999852 344555788999888873
Q ss_pred --c----cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 016668 189 --L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (385)
Q Consensus 189 --l----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~- 261 (385)
. +.|.+|+++..+|.+.+... +.+...|..+.+++ ++. +|.+|+++|++++++ ++.||.+...|
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~-----~~Le~~g~~Vtyl~--V~~-~G~v~~e~L~~al~~-~T~LVSim~aNn 152 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTC-----RYLERQGFEVTYLP--VDS-NGLVDLEQLEEALRP-DTILVSIMHANN 152 (386)
T ss_pred HHhhhcccCCCeEEEcccccHHHHHHH-----HHHHhcCCeEEEeC--CCC-CCeEcHHHHHHhcCC-CceEEEEEeccc
Confidence 2 25789999988875543211 22233465455444 663 799999999999965 56676554443
Q ss_pred -CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 262 -~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
.|..+|+++|.++|+++|+++++|++|+.|-+ |-.++ ++|++++|.|| |.||+| |+++.+++. .+.
T Consensus 153 E~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gki-----pi~~~~~~vD~ls~SaHK-~~GpkGiGaLyv~~~~----~~~ 222 (386)
T COG1104 153 ETGTIQPIAEIGEICKERGILFHVDAVQAVGKI-----PIDLEELGVDLLSFSAHK-FGGPKGIGALYVRPGV----RLE 222 (386)
T ss_pred CeeecccHHHHHHHHHHcCCeEEEehhhhcCce-----eccccccCcceEEeehhh-ccCCCceEEEEECCCC----ccC
Confidence 58899999999999999999999999988754 33343 69999999999 789999 888886652 121
Q ss_pred HHHhh-ccCCCc-cCCChHHHHHHHHHHHHHhhC
Q 016668 338 SAINN-AVFPGL-QGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 338 ~~i~~-~~fp~~-qg~p~~~~iaala~Al~e~~~ 369 (385)
..+.- ....+. .|+.+.+.|+|++.|++++.+
T Consensus 223 p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~ 256 (386)
T COG1104 223 PLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVE 256 (386)
T ss_pred ceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 11111 111111 356788999999999987764
No 14
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.88 E-value=2.5e-22 Score=194.50 Aligned_cols=213 Identities=19% Similarity=0.129 Sum_probs=150.9
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
+++.++++||++. +.+.+.++|.|+.+++.++++|||+|++..+.|.++. ..+...|..+..++.+.+
T Consensus 64 ~~~~~A~~~ga~~----~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~--------~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 64 AQELAARAFGAKH----TFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVI--------NGLVLSGAVPVYLKPERN 131 (294)
T ss_pred HHHHHHHHhCCCC----EEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHH--------HHHHHCCCEEEEecCccC
Confidence 5667899999876 3344555567999999999999999999987554331 134456766555554333
Q ss_pred CC---CCCCCHHHHHHHhhh-cCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCC-CC-CC
Q 016668 233 ES---TGLVDYDMLEKTAIL-FRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP-FK-YC 305 (385)
Q Consensus 233 ~~---~~~iD~d~le~~i~~-~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p-~~-ga 305 (385)
++ .+.+|++++++.+++ .++|+|++..++ +|...|+++|+++|+++|+++++|++|+.++.+.+..+.. .. ++
T Consensus 132 ~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~ 211 (294)
T cd00615 132 PYYGIAGGIPPETFKKALIEHPDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGA 211 (294)
T ss_pred cccCcCCCCCHHHHHHHHHhCCCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCC
Confidence 22 147999999999864 357888776554 4678899999999999999999999998766554433322 23 79
Q ss_pred cEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 306 DVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 306 Div~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
|++++|+||+++||++ |++..+++.. ..+++.........++|+...++++..|++.+.. +..++.++++++
T Consensus 212 div~~S~hK~l~g~~~~~~l~~~~~~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~~-~g~~~~~~~~~~ 284 (294)
T cd00615 212 DIVVQSTHKTLPALTQGSMIHVKGDLV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMAL-EGKELVEELIEL 284 (294)
T ss_pred cEEEEchhcccchHhHHHHHHhCCCcC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHH-HhHHHHHHHHHH
Confidence 9999999999999865 6666665421 1233444433344578999999999999987743 335566666543
No 15
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.88 E-value=3.4e-21 Score=197.54 Aligned_cols=267 Identities=15% Similarity=0.195 Sum_probs=176.9
Q ss_pred hcccCChHHHHHHHHHHHHh-hhccccc---cCC----CCCcH---HHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHH
Q 016668 82 SLGEADPEVCEIITKEKERQ-FKSLELI---ASE----NFTSR---AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE 150 (385)
Q Consensus 82 ~l~~~dp~~~~~i~~e~~~~-~~~l~Li---ase----n~~s~---~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le 150 (385)
+++.+.|..+.-++++..+. ..+.++| ..+ -.++. .+.+++...+... .+. |.+.+.+.+|+
T Consensus 12 r~~~v~~~~~~~~~~~~~~l~~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g-~~~------Y~~~~g~~~Lr 84 (460)
T PRK13238 12 RIKMVEPIRLTTREERERALAEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG-DEA------YAGSRSYYRLE 84 (460)
T ss_pred eeceeccccccCHHHHHHHHHHcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC-Ccc------cCCCCCHHHHH
Confidence 34556665554444433333 2455555 322 22322 4666666555321 122 33444445676
Q ss_pred HHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 151 TLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 151 ~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
+ .++++||.++ .+.+.+|+.|+..++.++++||| |+++++.+..+. ..+.+.|.....++.+
T Consensus 85 e----aia~~~~~~~-----vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~--------~~i~~~G~~~v~v~~~ 146 (460)
T PRK13238 85 D----AVKDIFGYPY-----TIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTR--------AHIELNGATAVDLVID 146 (460)
T ss_pred H----HHHHHhCCCc-----EEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchH--------HHHHHcCCEEEEEecc
Confidence 5 5778888765 36677889999999999999999 887765332221 1345667765555532
Q ss_pred c-------cCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCCCC---CC---CHHHHHHHHHHcCcEEEEecccccc-cc
Q 016668 231 L-------DESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPR---DF---DYPRMRQIADAVGALLMMDMAHISG-LV 293 (385)
Q Consensus 231 ~-------~~~~~~iD~d~le~~i~~---~~pklIi~~~s~~~~---~~---dl~~I~~ia~~~ga~livD~ah~~G-li 293 (385)
- ++.++.+|+++|++.+++ .++|+|+++.++|+. .. ++++|+++|+++|++|++|+||..+ +.
T Consensus 147 ~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~ 226 (460)
T PRK13238 147 EALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAY 226 (460)
T ss_pred ccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhh
Confidence 1 112346999999999975 357899998877652 33 4689999999999999999999653 22
Q ss_pred cc-----CcccCC--------CCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccCC--C--ccCCChHHH
Q 016668 294 AA-----SVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFP--G--LQGGPHNHT 356 (385)
Q Consensus 294 ~~-----g~~~~p--------~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp--~--~qg~p~~~~ 356 (385)
+. +..... ..++|++++|++|.+.+|.||+|+++++ ++.++++...+. + .+++++...
T Consensus 227 f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~-----~l~~~~~~~~~~~~g~~t~~g~~~~~ 301 (460)
T PRK13238 227 FIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDE-----DLFTECRTLCILYEGFPTYGGLAGRD 301 (460)
T ss_pred hhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChH-----HHHHHhhhcccccCCcccccCcHHHH
Confidence 21 111111 2368999999999999999999999975 788888776532 2 467778888
Q ss_pred HHHHHHHHHHhhCchHHHHHHH
Q 016668 357 IGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 357 iaala~Al~e~~~~~~~~y~~~ 378 (385)
.+|++++|+++..++|.+|+.+
T Consensus 302 ~~Ala~~l~e~~~~~~~~~~~~ 323 (460)
T PRK13238 302 MEALAVGLYEGMDEDYLAYRIG 323 (460)
T ss_pred HHHHHhhHHHhhChHHHHHHHH
Confidence 9999999999888887666544
No 16
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.88 E-value=8.2e-21 Score=187.60 Aligned_cols=243 Identities=15% Similarity=0.068 Sum_probs=168.1
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+++++++...++.|.+++...+. .+ ++ +...++.+.+++++++++|++..+ +.+.+.||++|+..+
T Consensus 1 ~~~~~~~~~~~~~v~~a~~~~~~-----~~---~~----~~~~~~~~~~~~~la~~~g~~~~~--~~~~~~~~t~al~~~ 66 (356)
T cd06451 1 LLLIPGPSNVPPRVLKAMNRPML-----GH---RS----PEFLALMDEILEGLRYVFQTENGL--TFLLSGSGTGAMEAA 66 (356)
T ss_pred CcccCCCcCCCHHHHHHhCCCcc-----CC---CC----HHHHHHHHHHHHHHHHHhcCCCCC--EEEEecCcHHHHHHH
Confidence 46889999999999999964321 11 11 112244445677899999995421 234566778999999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--C
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~--~ 262 (385)
+.++++|||+|++.++.| +++.+. ..+...|..+..++ .++ ++.+|++++++.+++++|++|++..++ +
T Consensus 67 ~~~~~~~g~~vl~~~~~~---~~~~~~---~~~~~~g~~~~~v~--~~~-~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~ 137 (356)
T cd06451 67 LSNLLEPGDKVLVGVNGV---FGDRWA---DMAERYGADVDVVE--KPW-GEAVSPEEIAEALEQHDIKAVTLTHNETST 137 (356)
T ss_pred HHHhCCCCCEEEEecCCc---hhHHHH---HHHHHhCCCeEEee--cCC-CCCCCHHHHHHHHhccCCCEEEEeccCCCc
Confidence 999999999999987643 221110 12345676555555 443 468999999999865578998876554 4
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i 340 (385)
+...|+++|.++|+++|+++++|++|+.|... .+... ++|++++|+||+|.+|.| |+++.++ ++.+.+
T Consensus 138 G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~----~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~------~~~~~~ 207 (356)
T cd06451 138 GVLNPLEGIGALAKKHDALLIVDAVSSLGGEP----FRMDEWGVDVAYTGSQKALGAPPGLGPIAFSE------RALERI 207 (356)
T ss_pred ccccCHHHHHHHHHhcCCEEEEeeehhccCcc----ccccccCccEEEecCchhccCCCCcceeEECH------HHHHHH
Confidence 57789999999999999999999999766321 11222 789999999999998876 8888877 455554
Q ss_pred hh--ccC----------------CCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHh
Q 016668 341 NN--AVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSA 380 (385)
Q Consensus 341 ~~--~~f----------------p~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~ 380 (385)
.. ... ....++++...++++..+++.+....+++..+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~ 265 (356)
T cd06451 208 KKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHR 265 (356)
T ss_pred HhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 42 000 02345677788888888888766555544444443
No 17
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.87 E-value=1.3e-20 Score=187.82 Aligned_cols=240 Identities=22% Similarity=0.274 Sum_probs=168.4
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
++..++|+.|++++...+.+.+..+..+. +..+.+..+.++ .+++.+++++|+++++ ..+++.++|.|+..++.++
T Consensus 6 ~~~~~~p~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~r~~la~~lg~~~~~--~v~~~~~~t~a~~~~~~~l 81 (371)
T PF00266_consen 6 AGTGPMPKSVLEAISDYLRNFYANPHSGV-SHRSREFAEILE-EAREALAKLLGAPPDE--EVVFTSNGTEALNAVASSL 81 (371)
T ss_dssp SSS-B-BHHHHHHHHHHHHHSGSSTSTSS-STTSHHHHHHHH-HHHHHHHHHHTSSTTE--EEEEESSHHHHHHHHHHHH
T ss_pred CCccCCCHHHHHHHHHHHHHhhhcCcccc-cchhhhhhHHHH-HHHHHHHHhcCCcccc--ccccccccchhhhhhhhcc
Confidence 66778899999999988877665432222 222444444444 5899999999999821 2345566677999999999
Q ss_pred ---ccCCCEEeecCCCCCccccCCccccccc-cccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC--CCC
Q 016668 189 ---LKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA--SAY 262 (385)
Q Consensus 189 ---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~--s~~ 262 (385)
+++||+|++.+.+|.+... .+.. ....|..+..++. + .++.+|++++++.+. .++++|++.. +.+
T Consensus 82 ~~~~~~g~~vl~~~~~~~s~~~-----~~~~~~~~~g~~v~~i~~--~-~~~~~~~~~~~~~l~-~~~~lv~~~~~~~~t 152 (371)
T PF00266_consen 82 LNPLKPGDEVLVTSNEHPSNRY-----PWEEIAKRKGAEVRVIPA--D-PGGSLDLEDLEEALN-PDTRLVSISHVENST 152 (371)
T ss_dssp HHHGTTTCEEEEEESSHHHHHH-----HHHHHHHHTTEEEEEEEE--G-TTSSCSHHHHHHHHH-TTESEEEEESBETTT
T ss_pred cccccccccccccccccccccc-----ccccccccchhhhccccc--c-ccchhhhhhhhhhhc-cccceEEeecccccc
Confidence 8999999998875544321 1112 2356776666663 3 356899999999997 4889987754 346
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
|...|+++|.++||++|+++++|++|+.|.. +-+++ ++|++++|.|| |.||+| |+++.+++ ..++
T Consensus 153 G~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~-----~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~------~~~~ 220 (371)
T PF00266_consen 153 GVRNPIEEIAKLAHEYGALLVVDAAQSAGCV-----PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPE------AIER 220 (371)
T ss_dssp TBBSSHHHHHHHHHHTTSEEEEE-TTTTTTS-----S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHH------HHHH
T ss_pred cEEeeeceehhhhhccCCceeEechhccccc-----cccccccccceeeecccc-cCCCCchhhheehhh------hhhc
Confidence 7889999999999999999999999988754 33344 89999999999 999997 88998883 4444
Q ss_pred Hhhcc--------------------CCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 340 INNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 340 i~~~~--------------------fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++... +....|+++...+.++..+++.+...+.+
T Consensus 221 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~ 274 (371)
T PF00266_consen 221 LRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIE 274 (371)
T ss_dssp HHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccc
Confidence 42111 11224688999999999999887544443
No 18
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.86 E-value=4e-20 Score=183.80 Aligned_cols=242 Identities=16% Similarity=0.146 Sum_probs=166.5
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcHHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTA 187 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs~A~~~a~~a 187 (385)
.+..++|+.+++++...+...+ ++|.+..+...+...+....++++++++||++ ++ ..+.+.+++.|+..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 6 AATSQKPQPVIDAIVDYYRHYN--ANVHRGVHELSARATDAYEAAREKVARFINAPSPD---EIIFTRNTTEAINLVAYG 80 (373)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCC---eEEEeCCHHHHHHHHHHH
Confidence 5677889999999988876543 34443222222223334444778899999998 42 123445566799999999
Q ss_pred hcc---CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 188 ILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 188 ll~---pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+.. |||+|++++++|.++..... ......|..+..++ ++ +++.+|++++++.+.+ ++++|++..+++
T Consensus 81 l~~~~~~g~~vl~~~~~~~~~~~~~~----~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~~~t 152 (373)
T cd06453 81 LGRANKPGDEIVTSVMEHHSNIVPWQ----QLAERTGAKLKVVP--VD-DDGQLDLEALEKLLTE-RTKLVAVTHVSNVL 152 (373)
T ss_pred hhhcCCCCCEEEECcchhHHHHHHHH----HHHhhcCcEEEEee--cC-CCCCcCHHHHHHHhcC-CceEEEEeCccccc
Confidence 877 99999999987655321100 12235576666665 44 4578999999999865 789998876654
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i 340 (385)
+...|+++|.++|+++|++|++|++|..|.. +.++. ++|++++|+||++.+++.|+++++++ +.+++
T Consensus 153 G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~------~~~~~ 221 (373)
T cd06453 153 GTINPVKEIGEIAHEAGVPVLVDGAQSAGHM-----PVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEE------LLEEM 221 (373)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEEhhhhcCce-----eeeccccCCCEEEeccccccCCCCcEEEEEchH------HhhcC
Confidence 5678999999999999999999999976643 22232 78999999999997766698888874 44433
Q ss_pred hhccC--------------------CCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 341 NNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 341 ~~~~f--------------------p~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
..... ....++|+...+.++..+++.+...++++
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~ 275 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEA 275 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHH
Confidence 32110 01125677778888888888777655543
No 19
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.86 E-value=5.2e-20 Score=184.42 Aligned_cols=222 Identities=21% Similarity=0.233 Sum_probs=155.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~-~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.+|.+++++...+.. +..+|+++++..|. +...++| +.+++++|.+. .+.++||+.|+..++.++++||
T Consensus 53 ~~~~v~~~~~~~~~~-~~~~~~~s~~~~G~~~~~~~le----~~ia~~~g~~~-----~ii~~~~~~a~~~~~~~l~~~g 122 (393)
T TIGR01822 53 SHPDLIQAAKDALDE-HGFGMSSVRFICGTQDIHKELE----AKIAAFLGTED-----TILYASCFDANGGLFETLLGAE 122 (393)
T ss_pred CCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHHHH----HHHHHHhCCCc-----EEEECchHHHHHHHHHHhCCCC
Confidence 488899998877654 44478888888885 3334444 57889999875 3567889999999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---c--CCcEEEEcCCC--CCCC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKLIIAGASA--YPRD 265 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~--~pklIi~~~s~--~~~~ 265 (385)
|+|++.++.|.++.. .+...+.. .+.+ ..+|++++++.+++ . ++++|+++..+ +|..
T Consensus 123 d~vi~~~~~~~s~~~--------~~~~~~~~--~~~~------~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~ 186 (393)
T TIGR01822 123 DAIISDALNHASIID--------GVRLCKAK--RYRY------ANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVI 186 (393)
T ss_pred CEEEEeccccHHHHH--------HHHhcCCc--eEEe------CCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCc
Confidence 999999887654321 22333332 1221 24799999998864 2 56788876543 4567
Q ss_pred CCHHHHHHHHHHcCcEEEEecccccccccc-Ccc--c-CCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHH
Q 016668 266 FDYPRMRQIADAVGALLMMDMAHISGLVAA-SVV--A-DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~~--~-~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i 340 (385)
.|+++|+++|+++|++|++|++|..|.... +.. + ..+. ++|++++|+||+|.|+++|++++++ ++.+.+
T Consensus 187 ~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g~r~G~~~~~~------~~~~~l 260 (393)
T TIGR01822 187 APLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGGASGGFTTARK------EVVELL 260 (393)
T ss_pred CCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhCCCcEEEEeCH------HHHHHH
Confidence 899999999999999999999997775432 110 0 1112 5789999999999999999999887 576766
Q ss_pred hhccCCC-ccCCChHHHHHHHHHHHHHh
Q 016668 341 NNAVFPG-LQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 341 ~~~~fp~-~qg~p~~~~iaala~Al~e~ 367 (385)
.....+. ..+++....+++...+++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~a~~~al~~~ 288 (393)
T TIGR01822 261 RQRSRPYLFSNSLPPAVVGASIKVLEML 288 (393)
T ss_pred HHhCccceecCCCCHHHHHHHHHHHHHH
Confidence 5432222 22344555555666676544
No 20
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.86 E-value=5.5e-20 Score=185.06 Aligned_cols=237 Identities=21% Similarity=0.267 Sum_probs=165.2
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceeecCC-cHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLS-GSPANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~-~~~~~~~~V~~~s-Gs~A~~~a~ 185 (385)
++..++++.|++++...+.+.+ +++.+ .+..+....+.+++ +++.+++++|+ +++ +|.+++ +|+++..++
T Consensus 26 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~g~~~~~----~i~~~~~~t~~i~~~~ 98 (401)
T PRK10874 26 AATALKPQAVIEATQQFYSLSA--GNVHRSQFAAAQRLTARYEA-AREQVAQLLNAPDAK----NIVWTRGTTESINLVA 98 (401)
T ss_pred CcccCCCHHHHHHHHHHHHhcc--CCCCCcccHHHHHHHHHHHH-HHHHHHHHcCCCCCC----EEEEECCHHHHHHHHH
Confidence 6677889999999988876543 44432 22223444445554 78899999999 443 344444 567989888
Q ss_pred HHh----ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 186 ~al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.++ ++|||+|++++++|.+... .+. ......|..+..++ ++ .++.+|++++++.+++ ++++|+++.++
T Consensus 99 ~~~~~~~~~~gd~vl~~~~~~~s~~~-~~~---~~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~i~~~~ 170 (401)
T PRK10874 99 QSYARPRLQPGDEIIVSEAEHHANLV-PWL---MVAQQTGAKVVKLP--LG-ADRLPDVDLLPELITP-RTRILALGQMS 170 (401)
T ss_pred HHhhhccCCCcCEEEECCcchHHHHH-HHH---HHHHHhCCEEEEEe--cC-CCCcCCHHHHHHhcCc-CcEEEEEeCCc
Confidence 887 4899999999987654321 110 12245676666555 44 3568999999999965 78999887665
Q ss_pred C--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHH
Q 016668 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (385)
Q Consensus 262 ~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~ 336 (385)
+ |...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+|| +.||.| |+++.+++ +
T Consensus 171 n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~------~ 238 (401)
T PRK10874 171 NVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHF-----PADVQALDIDFYAFSGHK-LYGPTGIGVLYGKSE------L 238 (401)
T ss_pred ccccCcCCHHHHHHHHHHcCCEEEEECCcccccc-----cCCchhcCCCEEEEeccc-ccCCCccEEEEEchH------H
Confidence 4 5778999999999999999999999976643 22222 68999999999 457887 88888773 4
Q ss_pred HHHHhhcc--------------------CCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 337 ESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 337 ~~~i~~~~--------------------fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
.+.+.... .....|+++...++|+..|++.+.+.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~ 294 (401)
T PRK10874 239 LEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDI 294 (401)
T ss_pred HhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCH
Confidence 44332110 1123467888899999999987655444
No 21
>PLN02651 cysteine desulfurase
Probab=99.85 E-value=4.9e-20 Score=183.33 Aligned_cols=233 Identities=17% Similarity=0.208 Sum_probs=160.6
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~a 187 (385)
++..++++.|++++...+.+.+ ++|+. .+..+.+.. ++.+.+++.+++++|++.+ ..+++.++|.|+..++.+
T Consensus 6 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~r~~la~~~g~~~~---~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 6 QATTPIDPRVLDAMLPFLIEHF--GNPHSRTHLYGWESE-DAVEKARAQVAALIGADPK---EIIFTSGATESNNLAIKG 79 (364)
T ss_pred cCCCCCCHHHHHHHHHHHHhCC--CCCChhhhHHHHHHH-HHHHHHHHHHHHHhCCCCC---eEEEeCCHHHHHHHHHHH
Confidence 5566889999999988776544 44543 111122333 3344478899999999864 234455667788777665
Q ss_pred h----ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--
Q 016668 188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (385)
Q Consensus 188 l----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-- 261 (385)
+ +++||+|++.+.+|.+... .+..+...|..+..++ ++ +++.+|++++++.+++ +++++++..++
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~-----~~~~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~v~~~~n~ 150 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLD-----SCRHLQQEGFEVTYLP--VK-SDGLVDLDELAAAIRP-DTALVSVMAVNNE 150 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHH-----HHHHHHhcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CcEEEEEECCCCC
Confidence 4 4789999998876644321 1112234465555555 44 3578999999999965 68888876554
Q ss_pred CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 262 ~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
++...|+++|.++|+++|+++++|++|+.|.+ +..++ ++|++++|.||+ .||.| |+++.+++. ..
T Consensus 151 tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~-----~~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~------~~ 218 (364)
T PLN02651 151 IGVIQPVEEIGELCREKKVLFHTDAAQAVGKI-----PVDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRP------RV 218 (364)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhhCCc-----ccCcccCCCCEEEechhhh-CCCCceEEEEEcCCC------CC
Confidence 45788999999999999999999999987743 22233 799999999996 68987 888888752 11
Q ss_pred HHhhcc------CCCccCCChHHHHHHHHHHHHHhh
Q 016668 339 AINNAV------FPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 339 ~i~~~~------fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
++.... .....|+++...+.++..|++.+.
T Consensus 219 ~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~ 254 (364)
T PLN02651 219 RLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAM 254 (364)
T ss_pred CCCccccCCCccCCccCCCccHHHHHHHHHHHHHHH
Confidence 111111 112357899999999999998665
No 22
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.85 E-value=9.1e-20 Score=183.96 Aligned_cols=237 Identities=18% Similarity=0.226 Sum_probs=164.1
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCc-HHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSG-SPANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sG-s~A~~~a~ 185 (385)
++..++++.|++++...+...+. ++.. .+..+.+..+.+++ +++.+++++|+. ++ +|.+++| |+++..++
T Consensus 30 a~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~----~v~~t~g~t~~l~~~~ 102 (406)
T PRK09295 30 AASAQKPSQVIDAEAEFYRHGYA--AVHRGIHTLSAQATEKMEN-VRKQAALFINARSAE----ELVFVRGTTEGINLVA 102 (406)
T ss_pred cccccCCHHHHHHHHHHHHhcCC--CCCCcccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHH
Confidence 66778899999999887765442 2221 22224444455555 788999999984 43 3445554 56888887
Q ss_pred HH----hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 186 TA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 186 ~a----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.+ +++|||+|++.+++|.+... .+. ......|..+..++ ++ .++.+|++++++.+++ ++++|++..++
T Consensus 103 ~~~~~~~~~~gd~vl~~~~~~~s~~~-~~~---~~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~i~~-~t~lv~l~~~~ 174 (406)
T PRK09295 103 NSWGNSNVRAGDNIIISEMEHHANIV-PWQ---MLCARVGAELRVIP--LN-PDGTLQLETLPALFDE-RTRLLAITHVS 174 (406)
T ss_pred HHhhhhcCCCcCEEEECcchhhHHHH-HHH---HHHHHcCcEEEEEe--cC-CCCCCCHHHHHHhcCC-CcEEEEEecch
Confidence 76 46899999999987644221 110 12234566555555 44 3577999999999865 78999887665
Q ss_pred C--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHH
Q 016668 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (385)
Q Consensus 262 ~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~ 336 (385)
+ |...|+++|.++|+++|+++++|++|+.|.. +-++. ++|++++|+|| +.||.| |+++.+++ +
T Consensus 175 n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~------~ 242 (406)
T PRK09295 175 NVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHK-LYGPTGIGILYVKEA------L 242 (406)
T ss_pred hcccccCCHHHHHHHHHHcCCEEEEEcccccCcc-----ccCchhcCCCEEEeehhh-ccCCCCcEEEEEchH------h
Confidence 4 5788999999999999999999999977643 22333 78999999999 568887 88888874 3
Q ss_pred HHHHhhc---------------------cCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 337 ESAINNA---------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 337 ~~~i~~~---------------------~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
.+.+... .+....|+++...++++..|++.+.+.+.
T Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~ 299 (406)
T PRK09295 243 LQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGL 299 (406)
T ss_pred HhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCH
Confidence 3322100 01123568899999999999987765444
No 23
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.85 E-value=1.2e-19 Score=183.18 Aligned_cols=234 Identities=17% Similarity=0.173 Sum_probs=166.2
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+.+.+++..+++.|++++...+.++. + +...++.+.++++++++||++.++ +.+.+++|+.++..+
T Consensus 11 ~l~~pGP~~~~~~V~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~l~~~~g~~~~~--~vi~~~~gt~a~~~a 76 (401)
T PLN02409 11 HLFVPGPVNIPERVLRAMNRPNEDHR-----------S-PAFPALTKELLEDVKYIFKTKSGT--PFIFPTTGTGAWESA 76 (401)
T ss_pred eeccCCCCCCCHHHHHHhcCCCCCCC-----------C-HHHHHHHHHHHHHHHHHhCCCCCC--EEEEeCCcHHHHHHH
Confidence 44668889999999999875432211 1 223355666889999999997532 456677888899999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASA 261 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi~~~s~ 261 (385)
+..+++|||+|++.++ +|++..|. ..+...|..+..++ .+. +..+|++++++.+++ .++|+|++..+.
T Consensus 77 ~~~~~~~Gd~Vlv~~~---~~~~~~~~---~~~~~~g~~v~~v~--~~~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~ 147 (401)
T PLN02409 77 LTNTLSPGDKVVSFRI---GQFSLLWI---DQMQRLNFDVDVVE--SPW-GQGADLDILKSKLRQDTNHKIKAVCVVHNE 147 (401)
T ss_pred HHhcCCCCCEEEEeCC---CchhHHHH---HHHHHcCCceEEEE--CCC-CCCCCHHHHHHHHhhCcCCCccEEEEEeec
Confidence 9999999999999986 34333221 12345576666665 332 235899999999875 368988876543
Q ss_pred --CCCCCCHHHHHHH--HHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchh
Q 016668 262 --YPRDFDYPRMRQI--ADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 334 (385)
Q Consensus 262 --~~~~~dl~~I~~i--a~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~ 334 (385)
+|...|+++|.++ |+++|+++++|++|+.|.. +-.++ ++|++++|.||||.||.| |+++.++
T Consensus 148 ~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~-----~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~------ 216 (401)
T PLN02409 148 TSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGAL-----DFRMDEWGVDVALTGSQKALSLPTGLGIVCASP------ 216 (401)
T ss_pred ccccccCCHHHHHHHHhhhccCcEEEEEcccccCCc-----cccccccCccEEEEcCccccCcCCCcceeEECH------
Confidence 5678899999999 9999999999999876532 32333 789999999999999876 8888877
Q ss_pred HHHHHHhhcc----C-----------CC-c-cCCChHHHHHHHHHHHHHhhCchH
Q 016668 335 ELESAINNAV----F-----------PG-L-QGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 335 ~~~~~i~~~~----f-----------p~-~-qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+++.... + .+ . .++|+.+.+.++..|++.+...+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~ 271 (401)
T PLN02409 217 KALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGL 271 (401)
T ss_pred HHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhH
Confidence 3444443210 0 01 1 346788889999999998765544
No 24
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.85 E-value=1.5e-19 Score=181.64 Aligned_cols=238 Identities=19% Similarity=0.211 Sum_probs=162.8
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceee-cCCcHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQ-PLSGSPANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~-~~sGs~A~~~a~ 185 (385)
++..++|+.|++++...+...+ +++.. .+..+.+..+.++ .+++.+++++|++ .+ +|. +.++|.++..++
T Consensus 23 a~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~~----~i~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 23 AATALKPQAVIDATQQFYRLSS--GTVHRSQHQQAQSLTARYE-LARQQVARFLNAPDAE----NIVWTRGTTESINLVA 95 (398)
T ss_pred ccccCCCHHHHHHHHHHHHhcC--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCCC----eEEEeCChHHHHHHHH
Confidence 5666789999999988775433 34432 2222333333444 4788999999995 43 344 445567999888
Q ss_pred HHh----ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 186 ~al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.++ ++|||+|++.+++|.+... .+. ..+...|..+..++ ++ .++.+|++++++.+++ ++++|++..++
T Consensus 96 ~~~~~~~~~~gd~Vl~~~~~~~s~~~-~~~---~~~~~~g~~v~~v~--~~-~~~~~~~~~l~~~i~~-~t~lv~i~~~~ 167 (398)
T TIGR03392 96 QSYARPRLQPGDEIIVSEAEHHANLI-PWL---MVAQQTGAKVVKLP--IG-ADLLPDIRQLPELLTP-RTRILALGQMS 167 (398)
T ss_pred HHhhhccCCCCCEEEECCcchhHHHH-HHH---HHHHHcCcEEEEEe--cC-CCCCcCHHHHHHHhcc-CceEEEEECcc
Confidence 887 5899999999987654321 110 12245676555555 44 2467999999999865 78999887665
Q ss_pred C--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHH
Q 016668 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (385)
Q Consensus 262 ~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~ 336 (385)
+ |...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||. .||.| |+++.++ ++
T Consensus 168 n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~------~~ 235 (398)
T TIGR03392 168 NVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG-----PPDVQALDIDFYAFSGHKL-YGPTGIGVLYGKT------EL 235 (398)
T ss_pred ccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCC-----CCChhhcCCCEEEEecccc-cCCCceEEEEEcH------HH
Confidence 4 5678999999999999999999999976543 21222 689999999995 57876 8888876 34
Q ss_pred HHHHhhcc--------------------CCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 337 ESAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 337 ~~~i~~~~--------------------fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.+++.... .....|+++...++++..|++.+.+.++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~ 292 (398)
T TIGR03392 236 LEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIA 292 (398)
T ss_pred HhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHH
Confidence 44432110 11124678888999999999876554443
No 25
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.84 E-value=2.2e-19 Score=180.51 Aligned_cols=239 Identities=19% Similarity=0.226 Sum_probs=162.0
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC-cHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYT 186 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r-~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~ 186 (385)
++..++|+.|.+++...+...+ +++... ++.+....+.++ .+++.+++++|++..+ +|.+++ +++++..++.
T Consensus 25 ~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~~~~~~~---~v~~~~g~t~~l~~~~~ 98 (403)
T TIGR01979 25 AATSQKPQQVIDAVAEYYRNSN--ANVHRGIHTLSVRATEAYE-AVREKVAKFINAASDE---EIVFTRGTTESINLVAY 98 (403)
T ss_pred ccccCCCHHHHHHHHHHHHhCC--CCCCCCccHHHHHHHHHHH-HHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHH
Confidence 5666789999999987766544 333221 122223333444 4678899999998311 344444 5568887777
Q ss_pred Hh----ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 187 AI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 187 al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
++ +++||+|++++++|.++... + .......|..+..++ ++ +++.+|++++++.+.+ ++++|++..+++
T Consensus 99 ~~~~~~~~~g~~vl~~~~~~~s~~~~-~---~~~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~i~~-~~~lv~~~~~~~ 170 (403)
T TIGR01979 99 SWGDSNLKAGDEIVISEMEHHANIVP-W---QLLAERTGATLKFIP--LD-DDGTLDLDDLEKLLTE-KTKLVAITHVSN 170 (403)
T ss_pred HhhhhcCCCCCEEEECcchhhHHHHH-H---HHHHHhcCcEEEEEe--cC-CCCCCCHHHHHHHhcc-CCeEEEEEcccc
Confidence 64 68999999999877553221 1 012235676655555 44 4578999999999865 799988876554
Q ss_pred --CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 263 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 263 --~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||++ ||.| |+++.+++ +.
T Consensus 171 ~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~------~~ 238 (403)
T TIGR01979 171 VLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHM-----PVDVQALDCDFYVFSGHKMY-GPTGIGVLYGKEE------LL 238 (403)
T ss_pred cccccCCHHHHHHHHHHcCCEEEEEchhhcCcc-----ccCccccCCCEEEEeccccc-CCCCceEEEEchH------HH
Confidence 5788999999999999999999999977643 11222 7899999999965 7887 88888763 43
Q ss_pred HHHhhcc--------------------CCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 338 SAINNAV--------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 338 ~~i~~~~--------------------fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
+.+.... +....|+++...++++..+++.+.+.+++
T Consensus 239 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~ 294 (403)
T TIGR01979 239 EQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLE 294 (403)
T ss_pred hcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHH
Confidence 4332100 01124678888899999999876554443
No 26
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.84 E-value=2.9e-19 Score=179.19 Aligned_cols=235 Identities=20% Similarity=0.246 Sum_probs=159.7
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC-cHHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTA 187 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~a 187 (385)
++...+|+.+++++...+.... ..++..|. ......++.+.+++.+++++|++++ +|.+++ ++.++..++.+
T Consensus 24 ~~~~~~p~~v~~a~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~l~~~ia~~~~~~~~----~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 24 PAGTQIPQSVADAVSAALTRSN--ANRGGAYE-SSRRADQVVDDAREAVADLLNADPP----EVVFGANATSLTFLLSRA 96 (397)
T ss_pred CccCCCCHHHHHHHHHHHHhcC--CCCCCCch-HHHHHHHHHHHHHHHHHHHcCCCCC----eEEEeCCHHHHHHHHHHH
Confidence 6677789999999988775432 12222121 1122223444567889999999864 344444 45677666655
Q ss_pred h---ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 188 I---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 188 l---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+ ++|||+|++.+++|.++.. .+. ..+...|..+..++ ++++++.+|++++++.+++ ++++|+++.+++
T Consensus 97 ~~~~~~~gd~vl~~~~~~~s~~~-~~~---~~~~~~g~~~~~~~--~~~~~~~~~~~~l~~~i~~-~~~lv~i~~~~n~t 169 (397)
T TIGR01976 97 ISRRWGPGDEVIVTRLDHEANIS-PWL---QAAERAGAKVKWAR--VDEATGELHPDDLASLLSP-RTRLVAVTAASNTL 169 (397)
T ss_pred HHhcCCCCCEEEEcCCchHhHHH-HHH---HHHHhcCCEEEEEe--ccccCCCcCHHHHHHhcCC-CceEEEEeCCCCCC
Confidence 4 7899999999886654321 110 12345676655554 5544578999999999864 688888876654
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i 340 (385)
|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||++ ||+.|++++++ ++.+.+
T Consensus 170 G~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~~G~l~~~~------~~~~~l 237 (397)
T TIGR01976 170 GSIVDLAAITELVHAAGALVVVDAVHYAPHG-----LIDVQATGADFLTCSAYKFF-GPHMGILWGRP------ELLMNL 237 (397)
T ss_pred CccCCHHHHHHHHHHcCCEEEEehhhhcccc-----CCCHHHcCCCEEEEechhhc-CCceEEEEEcH------HHHhhC
Confidence 5678999999999999999999999965522 21222 7899999999987 78899999887 454444
Q ss_pred hhccC---------CCccCCChHHHHHHHHHHHHHhhC
Q 016668 341 NNAVF---------PGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 341 ~~~~f---------p~~qg~p~~~~iaala~Al~e~~~ 369 (385)
..... ....|+++...++++..|++.+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~ 275 (397)
T TIGR01976 238 PPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAG 275 (397)
T ss_pred CCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHH
Confidence 32111 112467888899999999987654
No 27
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=3.6e-19 Score=176.27 Aligned_cols=197 Identities=19% Similarity=0.223 Sum_probs=153.6
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pG 192 (385)
....-++++.+.+.+.+.. ..+.++++|+ .+++++|+++ .|.+.|||.|+..++.+| ++||
T Consensus 13 i~~~e~~~v~~vl~sg~i~---------~G~~v~~FE~----~~ae~~G~k~-----ava~~sgT~AL~laL~al~ig~G 74 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLT---------GGPFVRRFEQ----AFAEYLGVKY-----AVAVSSGTAALHLALLALAIGPG 74 (374)
T ss_pred cchHHHHHHHHHHHcCCee---------cChHHHHHHH----HHHHHhCCCe-----EEEecChHHHHHHHHHhcCCCCC
Confidence 4566677777776554321 1255677876 5899999998 367899999999999977 8999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHH
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~ 272 (385)
|+|++++.++-+.. ..+...|. +++..++|++++.+|++.||+.+++ ++|.|+.- ..+|...|+++|.
T Consensus 75 DeVI~ps~TfvATa--------n~i~~~Ga--~PVFvDid~~T~nid~~~ie~aIt~-~tKAIipV-hl~G~~~dm~~i~ 142 (374)
T COG0399 75 DEVIVPSFTFVATA--------NAVLLVGA--KPVFVDIDPDTLNIDPDLIEAAITP-RTKAIIPV-HLAGQPCDMDAIM 142 (374)
T ss_pred CEEEecCCchHHHH--------HHHHHcCC--eEEEEecCCcccCCCHHHHHHHccc-CCeEEEEe-hhccCCCCHHHHH
Confidence 99999987543221 24556776 5666778888999999999999976 69988752 4578888999999
Q ss_pred HHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCC--ccCccccEEEEEEeCCCCchhHHHHHHhhccCCCc
Q 016668 273 QIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL 348 (385)
Q Consensus 273 ~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~ 348 (385)
+||++||++||.|+||+.|....|.. +. ..|+.++||| |.++.-.||+|+++++ ++.+++....+.|.
T Consensus 143 ~la~~~~l~vIEDaAqa~Ga~y~gk~---vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~-----ela~k~~~lr~hG~ 213 (374)
T COG0399 143 ALAKRHGLPVIEDAAQAHGATYKGKK---VGSFGDIGAFSFHATKNLTTGEGGAVVTNDE-----ELAEKARSLRNHGL 213 (374)
T ss_pred HHHHHcCCeEEEEcchhccCeecCcc---cccccceEEEEecCCCCccccCceEEEeCCH-----HHHHHHHHHHHhCc
Confidence 99999999999999999998876642 22 5688888888 8896559999999998 88888765555554
No 28
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.83 E-value=3.9e-19 Score=176.81 Aligned_cols=242 Identities=18% Similarity=0.222 Sum_probs=156.4
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeec-CCcHHHHHHHHHHhcc
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAILK 190 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~-~sGs~A~~~a~~all~ 190 (385)
++|+.|++++.+.+.... +.++. .|..+.... ...+.+++++++++|++..+ +|.+ .+++.++..++.++++
T Consensus 11 ~~p~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~---~v~~~~g~t~al~~~~~~~~~ 84 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYG--GSPGRGRYRLALRAS-REVEETRQLLAKLFNAPSSA---HVVFTNNATTALNIALKGLLK 84 (376)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccchHHHHHH-HHHHHHHHHHHHHhCcCCCC---eEEEeCCHHHHHHHHHHhccC
Confidence 467899999887765422 11221 111111112 23334677899999987531 3444 4667799999999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCH
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDY 268 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~~dl 268 (385)
+||+|++.+++|+++.. .+ .......|..+..++ .+ .++.+|++++++.+++ ++++|++..+++ |...|+
T Consensus 85 ~gd~vl~~~~~~~~~~~-~~---~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 85 EGDHVITTPMEHNSVAR-PL---ECLKEQIGVEITIVK--CD-NEGLISPERIKRAIKT-NTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred CCCEEEECcchhhHHHH-HH---HHHHHHcCcEEEEEe--cC-CCCCcCHHHHHHhcCC-CCeEEEEECCCCCccccCCH
Confidence 99999998876654321 00 001223365555444 44 3568999999999865 789988876654 578899
Q ss_pred HHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCC-C-chh----HHHH-
Q 016668 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDP-V-LGV----ELES- 338 (385)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~-~-~~~----~~~~- 338 (385)
++|.++|+++|+++++|++|+.|... ..+. ++|++++|+||++.||.| |+++.+++. + ... ....
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~-----~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~ 231 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIP-----IDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSA 231 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccC-----CCchhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccc
Confidence 99999999999999999999887542 1222 799999999999999987 666655542 0 000 0000
Q ss_pred HHh--hc-cCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 339 AIN--NA-VFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 339 ~i~--~~-~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
..+ .. ......|+++...++++..+++.+...+..
T Consensus 232 ~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~ 269 (376)
T TIGR01977 232 LIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIA 269 (376)
T ss_pred cccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHH
Confidence 000 00 000123578888899999999888766543
No 29
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.83 E-value=4.4e-19 Score=180.04 Aligned_cols=238 Identities=18% Similarity=0.170 Sum_probs=162.3
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecC-CcHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYT 186 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~-sGs~A~~~a~~ 186 (385)
++..++++.|++++...+...+. ++.. .++.+.+..+.++ .+++.+++++|++.. .+|.++ ++|.++..++.
T Consensus 39 a~~~~~p~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~r~~la~~~~~~~~---~~v~~t~g~t~al~~i~~ 112 (424)
T PLN02855 39 AATSQKPAAVLDALQDYYEEYNS--NVHRGIHALSAKATDAYE-LARKKVAAFINASTS---REIVFTRNATEAINLVAY 112 (424)
T ss_pred ccccCCCHHHHHHHHHHHHhcCC--CCCCccchHHHHHHHHHH-HHHHHHHHHcCCCCC---CEEEEeCCHHHHHHHHHH
Confidence 56667899999999877754432 3321 2232333344444 468899999999631 134444 45668888876
Q ss_pred H----hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 187 A----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 187 a----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
+ .++|||+|++.+++|.+... .+. ......|..+..++ +++ ++.+|++++++.+++ ++|+|++..+++
T Consensus 113 ~~~~~~~~~gd~vl~~~~~~~s~~~-~~~---~~a~~~g~~v~~v~--~~~-~~~~~~~~l~~~i~~-~t~lv~i~~~~n 184 (424)
T PLN02855 113 TWGLANLKPGDEVILSVAEHHSNIV-PWQ---LVAQKTGAVLKFVG--LTP-DEVLDVEQLKELLSE-KTKLVATHHVSN 184 (424)
T ss_pred HhhhhcCCCcCEEEECCCccHHHHH-HHH---HHHHHcCCEEEEEe--cCC-CCCcCHHHHHHHhcc-CceEEEEeCccc
Confidence 5 36899999999987754321 110 11234566555555 443 356999999999965 789998876654
Q ss_pred --CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 263 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 263 --~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
|...|+++|.++|+++|+++++|++|+.|.. +-.+. ++|++++|+|| +.||.| |+++.+++ +.
T Consensus 185 ~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~-----~~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~------~~ 252 (424)
T PLN02855 185 VLGSILPVEDIVHWAHAVGAKVLVDACQSVPHM-----PVDVQTLGADFLVASSHK-MCGPTGIGFLWGKSD------LL 252 (424)
T ss_pred cccccCCHHHHHHHHHHcCCEEEEEhhhhcCCc-----CCCchhcCCCEEEeeccc-ccCCCccEEEEEchh------hh
Confidence 5788999999999999999999999976643 22233 68999999999 678887 88888874 33
Q ss_pred HHHhhc--------------------cCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 338 SAINNA--------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 338 ~~i~~~--------------------~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+++... ......|+++...+++++.+++.+...+.
T Consensus 253 ~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~ 307 (424)
T PLN02855 253 ESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGM 307 (424)
T ss_pred hcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCH
Confidence 333211 00013567899999999999986655443
No 30
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.83 E-value=3.4e-19 Score=175.01 Aligned_cols=223 Identities=21% Similarity=0.188 Sum_probs=152.0
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCE
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDR 194 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~ 194 (385)
+|+|++++...+.+ |.+++.+.+.+.|.. ...+..++++++++|++. .+.+++|+.++.+++.++++|||+
T Consensus 17 ~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~---~~~~~l~~~la~~~~~~~-----~iv~~sg~~a~~~~~~~~~~~gd~ 87 (349)
T cd06454 17 HPEVIEAAKEALDK-YGVGAGGSRLISGTS---DLHEELEEELAEFHGKEA-----ALVFSSGYAANDGVLSTLAGKGDL 87 (349)
T ss_pred CHHHHHHHHHHHHH-hCCCCCCcCeecCCc---hHHHHHHHHHHHHhCCCC-----EEEeccHHHHHHHHHHHhcCCCCE
Confidence 68999999988864 444433333343422 233334567889999864 466789999999888999999999
Q ss_pred EeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh----cCCcEEEEcCCCC--CCCCCH
Q 016668 195 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASAY--PRDFDY 268 (385)
Q Consensus 195 Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~----~~pklIi~~~s~~--~~~~dl 268 (385)
|++.++.|.+... .+...|..+..++ .+|++++++++++ .++++|+++.+++ +...|+
T Consensus 88 Vl~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~ 151 (349)
T cd06454 88 IISDSLNHASIID--------GIRLSGAKKRIFK--------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPL 151 (349)
T ss_pred EEEehhhhHHHHH--------HHHHcCCceEEec--------CCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCH
Confidence 9998876644321 2334565443322 3588899988865 3567888766543 567899
Q ss_pred HHHHHHHHHcCcEEEEecccccccccc-Ccc--cCC--CCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 269 PRMRQIADAVGALLMMDMAHISGLVAA-SVV--ADP--FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gli~~-g~~--~~p--~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
++|.++|+++|+++++|++|..|.... +.. ..+ ..+.|++++|+||++. ++||+++.++ ++.+.+...
T Consensus 152 ~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~gG~i~~~~------~~~~~~~~~ 224 (349)
T cd06454 152 PELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFG-AVGGYIAGSK------ELIDYLRSY 224 (349)
T ss_pred HHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhc-ccCCEEECCH------HHHHHHHHh
Confidence 999999999999999999997665421 110 011 1267899999999875 5788888876 566666544
Q ss_pred cCCCc-cCCChHHHHHHHHHHHHHhhC
Q 016668 344 VFPGL-QGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 344 ~fp~~-qg~p~~~~iaala~Al~e~~~ 369 (385)
..+.. .++++...++++..+++.+..
T Consensus 225 ~~~~~~~~~~~~~~~~a~~~~l~~~~~ 251 (349)
T cd06454 225 ARGFIFSTSLPPAVAAAALAALEVLQG 251 (349)
T ss_pred chhhhccCCCCHHHHHHHHHHHHHHhc
Confidence 33322 234566677787888876643
No 31
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.83 E-value=5.6e-19 Score=177.42 Aligned_cols=198 Identities=13% Similarity=0.097 Sum_probs=138.6
Q ss_pred ccCCCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHH
Q 016668 108 IASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (385)
Q Consensus 108 iasen~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~ 186 (385)
|---.++++.+++++...... + +.|.. .+..+......+ +.+++.+++++|++. + +.+++|+.|+.+++.
T Consensus 26 ~~~~~p~~~~~~~a~~~~~~~-~--~~~~~~~~~~~~~~~~~~-~~l~~~lA~~~g~~~----~-~~~~g~t~a~~~al~ 96 (387)
T PRK09331 26 IQRGGILTPEARKALIEYGDG-Y--SVCDYCPGRLDQIKKPPI-ADFHEDLAEFLGMDE----A-RVTHGAREGKFAVMH 96 (387)
T ss_pred hhcCCCCCHHHHHHHHHHHhc-c--CCCcccccccccccChHH-HHHHHHHHHHhCCCc----E-EEeCCHHHHHHHHHH
Confidence 344567789999999877632 2 23221 112221111122 235667999999976 2 446677889999999
Q ss_pred HhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc------CCcEEEEcCC
Q 016668 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPKLIIAGAS 260 (385)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~------~pklIi~~~s 260 (385)
+++++||+|++..+. |.+.. ..+...|..+..++.+.+ +++.+|++++++.++.. ++++|++..+
T Consensus 97 ~l~~~gd~Vlv~~~~---h~s~~-----~~~~~~G~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~ 167 (387)
T PRK09331 97 SLCKKGDYVVLDGLA---HYTSY-----VAAERAGLNVREVPKTGY-PEYKITPEAYAEKIEEVKEETGKPPALALLTHV 167 (387)
T ss_pred HhcCCCCEEEECCCc---hHHHH-----HHHHHcCCEEEEEeCccC-cCCCcCHHHHHHHHHHhhhccCCCCEEEEEECC
Confidence 999999999998764 33321 134556766555553213 35689999999988642 5888888765
Q ss_pred C--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccc-cEEEEEEeC
Q 016668 261 A--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIFFKK 328 (385)
Q Consensus 261 ~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gp-rgG~I~~~~ 328 (385)
+ ++...|+++|.++|+++|+++++|++|+.|.. +.+.. ++|++++|+||++.+| ++|++++++
T Consensus 168 ~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~-----~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~ 235 (387)
T PRK09331 168 DGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRM-----PVDGKKLGADFIVGSGHKSMAASAPSGVLATTE 235 (387)
T ss_pred CCCCcccccHHHHHHHHHHcCCEEEEECCcccCCc-----CCCHHHcCCCEEEeeCcccccCCCCEEEEEECH
Confidence 4 45778999999999999999999999987643 22222 7899999999999765 568998887
No 32
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.83 E-value=4.5e-19 Score=173.58 Aligned_cols=231 Identities=17% Similarity=0.123 Sum_probs=165.7
Q ss_pred hhhcccCChHHHHHHHHHHHHhh-hc-cccccCCCCCcHHHHHHHhhHhhccC-CCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQF-KS-LELIASENFTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKR 156 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~-~~-l~Liasen~~s~~V~~al~s~l~~~y-~~g~p~~r~~~G~~~~~~le~~~~~~ 156 (385)
+.++....|+++..+.+...+.. .. |----++..+|+.|.+++.......- .+++++ | |.+ ++.+..++.
T Consensus 9 ~~~l~~~~~~vw~e~~~la~e~~~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~---~-G~p---~L~~aL~k~ 81 (420)
T KOG0257|consen 9 NRNLSTSKPYVWTEINRLAAEHKVPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRG---Y-GLP---QLRKALAKA 81 (420)
T ss_pred cccccccCCcHHHHHHHHHHhcCCCCcccCCCCCCCCcHHHHHHHHHHhccchhcccccc---C-Cch---HHHHHHHHH
Confidence 46678888899987777555443 11 11124577788999999886654431 122222 3 444 677777788
Q ss_pred HHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc-----
Q 016668 157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR----- 230 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~----- 230 (385)
+++++|.... ...+|..++|. +|+..++++++++||+|++.+|-+.++.. .+.++|....+++..
T Consensus 82 ~se~~~~~~~-~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~--------~~~maG~tpv~v~~~~~~g~ 152 (420)
T KOG0257|consen 82 YSEFYGGLLD-PDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIP--------QVVMAGGTPVFVPLKPKEGN 152 (420)
T ss_pred HHHHhccccC-CcccEEEecCchHHHHHHHHHHcCCCCEEEEecCcchhhhh--------HHhhcCCcceeecccccccc
Confidence 8998887542 22467778876 59999999999999999999997765532 356777766666643
Q ss_pred ccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-----CCCHHHHHHHHHHcCcEEEEeccccccccccCc-ccCC--C
Q 016668 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--F 302 (385)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~-----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p--~ 302 (385)
....++.+|.+++|..+.+ |+|+|+++.|+||. ...+++|++||++||.++|+|+++ --+++.+. ++.. +
T Consensus 153 ~~s~~~~~D~~~le~~~t~-kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevY-e~~v~d~~~h~r~asl 230 (420)
T KOG0257|consen 153 VSSSDWTLDPEELESKITE-KTKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVY-EWLVYDGNKHIRIASL 230 (420)
T ss_pred ccCccccCChHHHHhhccC-CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHh-HHHhhCCCcceeeecC
Confidence 1134678999999999976 89999999999883 235999999999999999999995 45565553 3221 1
Q ss_pred CCC---cEEEECCCccC--ccccEEEEEEeC
Q 016668 303 KYC---DVVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 303 ~ga---Div~~S~hK~l--~GprgG~I~~~~ 328 (385)
.|. -+.++|+.|+| .|||-||+++++
T Consensus 231 Pgm~ertitvgS~gKtf~~TGWrlGW~igp~ 261 (420)
T KOG0257|consen 231 PGMYERTITVGSFGKTFGVTGWRLGWAIGPK 261 (420)
T ss_pred CchhheEEEeccccceeeeeeeeeeeeechH
Confidence 232 26789999997 899999999955
No 33
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.83 E-value=4e-19 Score=177.40 Aligned_cols=235 Identities=19% Similarity=0.236 Sum_probs=161.2
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
++..++++.|++++...+.+. .++|+..+..+....+.++ .+++++++++|++.+ ..+++.+||.|+..++.++
T Consensus 6 aa~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~---~i~~t~~~t~a~~~al~~~ 79 (379)
T TIGR03402 6 NATTRVDPEVLEAMLPYFTEY--FGNPSSMHSFGGEVGKAVE-EAREQVAKLLGAEPD---EIIFTSGGTESDNTAIKSA 79 (379)
T ss_pred cCCCCCCHHHHHHHHHHHHhc--CCCCCcccHHHHHHHHHHH-HHHHHHHHHhCCCCC---eEEEeCcHHHHHHHHHHHH
Confidence 566788999999998887643 3666643322333344444 478899999999864 1344556778999888876
Q ss_pred c---cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--C
Q 016668 189 L---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (385)
Q Consensus 189 l---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~ 263 (385)
+ .+||+|++.+.+|.+.... +..+...|..+..++ ++ +++.+|++++++.+++ +++++++..+++ |
T Consensus 80 ~~~~~~~~~vv~~~~~~~s~~~~-----~~~~~~~G~~v~~v~--~~-~~g~~~~~~l~~~i~~-~~~lv~i~~~~n~tG 150 (379)
T TIGR03402 80 LAAQPEKRHIITTAVEHPAVLSL-----CQHLEKQGYKVTYLP--VD-EEGRLDLEELRAAITD-DTALVSVMWANNETG 150 (379)
T ss_pred HHhcCCCCeEEEcccccHHHHHH-----HHHHHHcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CcEEEEEEcccCCee
Confidence 4 4678999888766543221 112233566555555 44 3578999999999965 788887765544 5
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHH
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i 340 (385)
...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+|| +.||.| |+++.+++.. +...+
T Consensus 151 ~~~~~~~I~~l~~~~g~~vivD~~~~~g~~-----~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~----~~p~~ 220 (379)
T TIGR03402 151 TIFPIEEIGEIAKERGALFHTDAVQAVGKI-----PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTR----FRPLL 220 (379)
T ss_pred ecccHHHHHHHHHHcCCEEEEECccccccc-----ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCC----CCCcc
Confidence 788999999999999999999999987643 22333 79999999999 778987 8888876521 11111
Q ss_pred h--hccCCCccCCChHHHHHHHHHHHHHhh
Q 016668 341 N--NAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 341 ~--~~~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
. ........|+++...+.++..|++.+.
T Consensus 221 ~g~~~~~~~~~gt~~~~~~~~l~~al~~~~ 250 (379)
T TIGR03402 221 RGGHQERGRRAGTENVPGIVGLGKAAELAT 250 (379)
T ss_pred cCCccCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 0 000011246788899999999997653
No 34
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.82 E-value=8.4e-19 Score=173.46 Aligned_cols=234 Identities=20% Similarity=0.256 Sum_probs=159.2
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYT 186 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~-~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~ 186 (385)
++..++++.|++++...+.+.+ ++|+.+.+ .+....+.++ .+++++++++|++.+ +|.+++| +.|+..++.
T Consensus 5 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~la~~~g~~~~----~v~~~~g~t~a~~~~l~ 77 (353)
T TIGR03235 5 NATTPIDPAVAEAMLPWLLEEF--GNPSSRTHEFGHNAKKAVE-RARKQVAEALGADTE----EVIFTSGATESNNLAIL 77 (353)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCCchhhHHHHHHHHHHH-HHHHHHHHHhCCCCC----eEEEeCCHHHHHHHHHH
Confidence 4566889999999988875543 45654322 1333333344 478899999999864 3445555 569998888
Q ss_pred Hhc----cCC-CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 187 AIL----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 187 all----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
++. ++| |+|++...+|+++... +..+...|..+..++ ++ +++.+|++++++.+++ ++++|++..++
T Consensus 78 ~l~~~~~~~g~~~vi~~~~~~~s~~~~-----~~~~~~~G~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~ 148 (353)
T TIGR03235 78 GLARAGEQKGKKHIITSAIEHPAVLEP-----IRALERNGFTVTYLP--VD-ESGRIDVDELADAIRP-DTLLVSIMHVN 148 (353)
T ss_pred HHHHhcccCCCCeeeEcccccHHHHHH-----HHHHHhcCCEEEEEc--cC-CCCcCCHHHHHHhCCC-CCEEEEEEccc
Confidence 875 366 7888887766543221 112233466555544 44 3578999999999864 68898877655
Q ss_pred C--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHH
Q 016668 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (385)
Q Consensus 262 ~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~ 336 (385)
+ |...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||+ .||.| |+++.+++.. .
T Consensus 149 n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~----~ 218 (353)
T TIGR03235 149 NETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKI-----TVDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGK----P 218 (353)
T ss_pred CCceeccCHHHHHHHHHHcCCEEEEEchhhcCCc-----cccccccCCCEEEeehhhc-CCCCceEEEEEccCcc----c
Confidence 4 5678999999999999999999999987754 22233 799999999998 58886 8888887521 0
Q ss_pred HHHHhhccC------CCccCCChHHHHHHHHHHHHHhh
Q 016668 337 ESAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 337 ~~~i~~~~f------p~~qg~p~~~~iaala~Al~e~~ 368 (385)
...+....+ ....|+++...++++..|++.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~ 256 (353)
T TIGR03235 219 KAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR 256 (353)
T ss_pred ccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH
Confidence 001111111 11246788899999999998764
No 35
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.82 E-value=1.1e-18 Score=174.34 Aligned_cols=223 Identities=21% Similarity=0.203 Sum_probs=153.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD 193 (385)
+++.+.+++...+.. +..++++.++..|.. ++.+..++++++++|.+. +|.+++|++++..++.++++|||
T Consensus 57 ~~~~i~~a~~~~~~~-~~~~~~~~~~~~G~~---~l~~~l~~~la~~~g~~~-----~i~~tsG~~a~~~~~~~l~~~gd 127 (397)
T PRK06939 57 NHPELIAAAKAALDS-HGFGMASVRFICGTQ---DLHKELEEKLAKFLGTED-----AILYSSCFDANGGLFETLLGKED 127 (397)
T ss_pred CCHHHHHHHHHHHHH-cCCCCcccccccCCc---HHHHHHHHHHHHHhCCCc-----EEEEcChHHHHHHHHHHhCCCCC
Confidence 688899988877643 334555555556764 455566778999999764 57788999999999999999999
Q ss_pred EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---c--CCcEEEEcCCC--CCCCC
Q 016668 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---F--RPKLIIAGASA--YPRDF 266 (385)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~--~pklIi~~~s~--~~~~~ 266 (385)
.|++.+|.|.++.. .+...+..+ +.++ .+|++++++.++. . ++++|+++... +|...
T Consensus 128 ~vi~~~~~~~~~~~--------~~~~~~~~~--~~~~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~ 191 (397)
T PRK06939 128 AIISDALNHASIID--------GVRLCKAKR--YRYA------NNDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIA 191 (397)
T ss_pred EEEEEhhhhHHHHH--------HHHhcCCce--EEeC------CCCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcC
Confidence 99999986654321 233445433 3322 2588999888753 2 56778776432 45567
Q ss_pred CHHHHHHHHHHcCcEEEEecccccccccc-Cc-cc--CCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 267 DYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA--DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 267 dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~--~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
++++|.++|+++|++|++|++|..|.... +. .+ ..+. +.|++++|+||++.|+++|++++++ ++.+.+.
T Consensus 192 ~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~------~~~~~l~ 265 (397)
T PRK06939 192 PLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRK------EVIDWLR 265 (397)
T ss_pred CHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCH------HHHHHHH
Confidence 89999999999999999999996664321 11 11 1122 5689999999999889999999887 5777665
Q ss_pred hccCCCcc-CCChHHHHHHHHHHHHHh
Q 016668 342 NAVFPGLQ-GGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 342 ~~~fp~~q-g~p~~~~iaala~Al~e~ 367 (385)
....+... +++....++++..+++.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~a~~~al~~~ 292 (397)
T PRK06939 266 QRSRPYLFSNSLAPAIVAASIKVLELL 292 (397)
T ss_pred HhCccccccCCCCHHHHHHHHHHHHHH
Confidence 54333222 334444455555566654
No 36
>PRK02769 histidine decarboxylase; Provisional
Probab=99.82 E-value=5e-18 Score=170.17 Aligned_cols=244 Identities=17% Similarity=0.134 Sum_probs=164.8
Q ss_pred HHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCC-CcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 116 ~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~-~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
...++.+...+.+.+ |+|.+....|.. ..++|+.+.++++++||++..+ || +++++||++|+.++.+. +.|+
T Consensus 36 ~~~~~~~~~~~~~n~--gnp~~~~~~g~~-~~~~e~~~~~~~a~l~g~~~~~~~G--~~TsGgTean~~a~~~ar~~~~~ 110 (380)
T PRK02769 36 YSALKRFFSFSINNC--GDPYSKSNYPLN-SFDFERDVMNFFAELFKIPFNESWG--YITNGGTEGNLYGCYLARELFPD 110 (380)
T ss_pred HHHHHHHHHhhhccC--CCccccCCCCCC-hHHHHHHHHHHHHHHhCCCCCCCCE--EEecChHHHHHHHHHHHHHhCCC
Confidence 355555555554443 566543322332 3468888999999999997543 43 45667788988776554 4688
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcC--CCCCCCCCH
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA--SAYPRDFDY 268 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~--s~~~~~~dl 268 (385)
++|++++.+|.+.. +.+...|.....++ ++ .++.+|+++|++.+++. +|.+|++.. +.+|...|+
T Consensus 111 ~~ii~s~~~H~Sv~--------ka~~~lg~~~~~V~--~~-~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi 179 (380)
T PRK02769 111 GTLYYSKDTHYSVS--------KIARLLRIKSRVIT--SL-PNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNI 179 (380)
T ss_pred cEEEeCCCceehHH--------HHHHHcCCCCceec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCH
Confidence 99999887554321 23345565555555 44 36789999999999764 377776543 446788899
Q ss_pred HHHHHHHHHcC---cEEEEeccccccccccCcccCCCC---CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHh
Q 016668 269 PRMRQIADAVG---ALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 269 ~~I~~ia~~~g---a~livD~ah~~Gli~~g~~~~p~~---gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~ 341 (385)
++|.++|+++| +++++|+||+.+.+..-....+++ ++|.+++|+||++.+|.| |+++++++ +.+.+.
T Consensus 180 ~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~------~~~~~~ 253 (380)
T PRK02769 180 KEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKK------YVERIS 253 (380)
T ss_pred HHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEehh------hhhhcc
Confidence 99999999998 699999999766542111111232 799999999999888987 88888874 333331
Q ss_pred h------ccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhc
Q 016668 342 N------AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSAC 381 (385)
Q Consensus 342 ~------~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~ 381 (385)
. ..-+.+.|+.+...++++-.+++.+-..+|++..++..+
T Consensus 254 ~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~ 299 (380)
T PRK02769 254 VDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLD 299 (380)
T ss_pred cCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 1 111245677777788888999988877777766655544
No 37
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.5e-18 Score=171.80 Aligned_cols=238 Identities=16% Similarity=0.150 Sum_probs=175.4
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+-|+|.+..+++.|+++|.....++.+ -++.+.+ +.+.+.++.+|+++.. + +.+.+.|||.|+.++
T Consensus 7 ~Ll~PGP~~v~~~V~~am~~~~~~h~s-----------~~F~~~~-~~~~~~L~~v~~t~~~-~-~~ll~gsGt~amEAa 72 (383)
T COG0075 7 LLLTPGPVPVPPRVLLAMARPMVGHRS-----------PDFVGIM-KEVLEKLRKVFGTENG-D-VVLLSGSGTLAMEAA 72 (383)
T ss_pred eeeeCCCCCCCHHHHHHhcCCCCCCCC-----------HHHHHHH-HHHHHHHHHHhcCCCC-c-EEEEcCCcHHHHHHH
Confidence 667899999999999999866544332 2333334 4467889999999842 2 567778899999999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-CCcEEEE--cCCC
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIA--GASA 261 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-~pklIi~--~~s~ 261 (385)
+.++++|||+||+.. +|.+++++. +.+...|..+..+..++ ...+|++++++.+++. ..|+|.+ +.++
T Consensus 73 v~sl~~pgdkVLv~~---nG~FG~R~~---~ia~~~g~~v~~~~~~w---g~~v~p~~v~~~L~~~~~~~~V~~vH~ETS 143 (383)
T COG0075 73 VASLVEPGDKVLVVV---NGKFGERFA---EIAERYGAEVVVLEVEW---GEAVDPEEVEEALDKDPDIKAVAVVHNETS 143 (383)
T ss_pred HHhccCCCCeEEEEe---CChHHHHHH---HHHHHhCCceEEEeCCC---CCCCCHHHHHHHHhcCCCccEEEEEeccCc
Confidence 999999999999986 366665542 34567777666665432 3479999999999743 3466644 4567
Q ss_pred CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCC-------
Q 016668 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPV------- 331 (385)
Q Consensus 262 ~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~------- 331 (385)
++...|+++|+++|++||+++++|+.-+.|-. +-.++ +.|+++++.+|+|.+|.| |++..+++..
T Consensus 144 TGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~-----~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~ 218 (383)
T COG0075 144 TGVLNPLKEIAKAAKEHGALLIVDAVSSLGGE-----PLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERK 218 (383)
T ss_pred ccccCcHHHHHHHHHHcCCEEEEEecccCCCc-----ccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCC
Confidence 78888999999999999999999997655522 33344 899999999999999999 7777776520
Q ss_pred ---chhHH---HHHHhh-ccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 332 ---LGVEL---ESAINN-AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 332 ---~~~~~---~~~i~~-~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.+.++ .+..+. ..+| .+|..+.+.||..||+.++++++.
T Consensus 219 ~~~~ylDL~~~~~~~~~~~~~p---~Tppv~~i~aL~~al~~i~~EGle 264 (383)
T COG0075 219 HPSFYLDLKKWLKYMEKKGSTP---YTPPVNLIYALREALDLILEEGLE 264 (383)
T ss_pred CCceeecHHHHHHHHhhcCCCC---CCCCHHHHHHHHHHHHHHHHhhHH
Confidence 11133 333333 2333 368999999999999999998774
No 38
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.82 E-value=1e-18 Score=176.16 Aligned_cols=233 Identities=19% Similarity=0.238 Sum_probs=157.4
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~-~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~a 187 (385)
++..++++.|++++...+...+ ++|+.+.+ .+.. ..+..+.+++.+++++|+++++ .+++.++|.++..++.+
T Consensus 10 aa~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~g~~~~~---v~~~~g~t~a~~~~l~~ 83 (402)
T TIGR02006 10 AATTPVDPRVAEKMMPYLTEKF--GNPASRSHSFGWE-AEEAVENARNQVAELIGADSRE---IVFTSGATESNNLAIKG 83 (402)
T ss_pred CcCCCCCHHHHHHHHHHHHhcC--CCCChhhhHHHHH-HHHHHHHHHHHHHHHhCCCCCe---EEEeCCHHHHHHHHHHH
Confidence 5566889999999987775543 44443211 1222 2233444788899999998742 34445566798888776
Q ss_pred h----ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 016668 188 I----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (385)
Q Consensus 188 l----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~- 262 (385)
+ .++||+|++.+++|.+.... +..+...|..+..++ ++ +++.+|++++++.+++ ++++|++..+++
T Consensus 84 l~~~~~~~g~~Vi~~~~~h~s~~~~-----~~~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~v~~~~n~ 154 (402)
T TIGR02006 84 IAHFYKSKGNHIITSKTEHKAVLDT-----CRYLEREGFEVTYLP--PK-SNGLIDLEELKAAIRD-DTILVSIMHVNNE 154 (402)
T ss_pred HHHhhcCCCCEEEECCCccHHHHHH-----HHHHHhcCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CCEEEEEECCCcC
Confidence 5 37899999998766543211 112233466555554 44 3578999999999865 688888776654
Q ss_pred -CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 263 -~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||+ .||.| |+++.+++.. .
T Consensus 155 tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~------~ 222 (402)
T TIGR02006 155 IGVIQDIAAIGEICRERKVFFHVDAAQSVGKI-----PINVNELKVDLMSISGHKI-YGPKGIGALYVRRKPR------V 222 (402)
T ss_pred ceecccHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCccccCCCEEEEehhhh-cCCCceEEEEEccCCC------C
Confidence 5678999999999999999999999987643 22222 789999999995 57876 7777776421 1
Q ss_pred HHhhccC------CCccCCChHHHHHHHHHHHHHhh
Q 016668 339 AINNAVF------PGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 339 ~i~~~~f------p~~qg~p~~~~iaala~Al~e~~ 368 (385)
++..... ....|+++...+++++.+++.+.
T Consensus 223 ~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~ 258 (402)
T TIGR02006 223 RLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK 258 (402)
T ss_pred CCCceecCCCccCCccCCCccHHHHHHHHHHHHHHH
Confidence 1111000 11246788899999999998764
No 39
>PRK02948 cysteine desulfurase; Provisional
Probab=99.82 E-value=1.2e-18 Score=173.98 Aligned_cols=234 Identities=14% Similarity=0.164 Sum_probs=159.8
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTA 187 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~a 187 (385)
++..++++.|++++...+...+ +.++..+..|....+. .+.+++.+++++|++++ +|.+++| ++++..++.+
T Consensus 7 a~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~r~~la~~~g~~~~----~i~~~~g~t~a~~~~~~~ 79 (381)
T PRK02948 7 AATTPMSKEALQTYQKAASQYF--GNESSLHDIGGTASSL-LQVCRKTFAEMIGGEEQ----GIYFTSGGTESNYLAIQS 79 (381)
T ss_pred CCCCCCCHHHHHHHHHHHHhcC--CCCccccHHHHHHHHH-HHHHHHHHHHHhCCCCC----eEEEeCcHHHHHHHHHHH
Confidence 5566889999999987776433 3444444444443334 44578899999999764 4555555 6798888877
Q ss_pred hc----cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 016668 188 IL----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (385)
Q Consensus 188 ll----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~- 262 (385)
++ ++||+|++.+.+|.++.... ..+...|..+..++ ++ +++.+|++++++.+++ ++++|++..+++
T Consensus 80 ~~~~~~~~g~~vv~~~~~h~s~~~~~-----~~~~~~g~~v~~v~--~~-~~~~~d~~~l~~~l~~-~~~lv~~~~~~n~ 150 (381)
T PRK02948 80 LLNALPQNKKHIITTPMEHASIHSYF-----QSLESQGYTVTEIP--VD-KSGLIRLVDLERAITP-DTVLASIQHANSE 150 (381)
T ss_pred HHHhccCCCCEEEECCcccHHHHHHH-----HHHHhCCCEEEEEe--eC-CCCCCCHHHHHHhcCC-CCEEEEEECCcCC
Confidence 75 67999999887665432211 12344566555555 44 3578999999998864 688888876655
Q ss_pred -CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 263 -~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
|...|+++|.++|+++|+++++|++|..|.. +..+. ++|++++|+||+ .||.| |+++.+++. .+..
T Consensus 151 tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~-----~~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~~~~~----~~~~ 220 (381)
T PRK02948 151 IGTIQPIAEIGALLKKYNVLFHSDCVQTFGKL-----PIDVFEMGIDSLSVSAHKI-YGPKGVGAVYINPQV----RWKP 220 (381)
T ss_pred cEeehhHHHHHHHHHHcCCEEEEEChhhcccc-----ccCcccCCCCEEEecHHhc-CCCCcEEEEEEcCCC----CCCC
Confidence 4678999999999999999999999877632 11222 789999999996 47876 888877642 1111
Q ss_pred HHh--hccCCCccCCChHHHHHHHHHHHHHhh
Q 016668 339 AIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 339 ~i~--~~~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
... ........++++...++|+..|++...
T Consensus 221 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~ 252 (381)
T PRK02948 221 VFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL 252 (381)
T ss_pred cccCCCCCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 000 000111346788888999999998753
No 40
>PRK07179 hypothetical protein; Provisional
Probab=99.81 E-value=2.7e-18 Score=173.42 Aligned_cols=228 Identities=18% Similarity=0.256 Sum_probs=157.7
Q ss_pred cCCCCC----cHHHHHHHhhHhhccCCCCCC-CCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 109 ASENFT----SRAVMEAVGSCLTNKYSEGLP-GKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 109 asen~~----s~~V~~al~s~l~~~y~~g~p-~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
.+.+|+ .|.|++++...+.. +..+.. ++.+..|.+...+||+ ++++++|.+. .++++||+.||..
T Consensus 60 ~~~~YL~l~~~p~v~~a~~~~~~~-~~~~~~~s~~~~~~~~~~~~le~----~la~~~g~~~-----~~~~~sG~~An~~ 129 (407)
T PRK07179 60 QSNDYLNLSGHPDIIKAQIAALQE-EGDSLVMSAVFLHDDSPKPQFEK----KLAAFTGFES-----CLLCQSGWAANVG 129 (407)
T ss_pred ecCCccCCCCCHHHHHHHHHHHHH-hCCCCCccccccCCchHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHH
Confidence 566665 79999999888754 321111 3345555565566664 6889999875 3678899999999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~- 262 (385)
++.++.++||.|++..+.|.+.. ..+...|. +..+++ ..|++++++.+++.++++|+++.+++
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~--------~~~~~~g~--~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLW--------EGVRAAGA--QAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHH--------HHHHHCCC--eEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999999999998765443221 12234444 333432 36999999998654578888876554
Q ss_pred -CCCCCHHHHHHHHHHcCcEEEEeccccccccc-cCc-ccCCC--C-CCcEEEECCCccCccccEEEEEEeCCCCchhHH
Q 016668 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VADPF--K-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVEL 336 (385)
Q Consensus 263 -~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~-~~~p~--~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~ 336 (385)
|...|+++|.++|+++|++|++|++|+.|... .|. ....+ . .+|++++|+||+++ +++|++++++ ++
T Consensus 194 tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g-~~~G~l~~~~------~~ 266 (407)
T PRK07179 194 TGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA-GRAGIITCPR------EL 266 (407)
T ss_pred CCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh-ccCeEEEeCH------HH
Confidence 57889999999999999999999999766432 111 01112 2 56999999999985 5799999887 56
Q ss_pred HHHHhhccCCCcc-CCChHHHHHHHHHHHHHhhC
Q 016668 337 ESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 337 ~~~i~~~~fp~~q-g~p~~~~iaala~Al~e~~~ 369 (385)
.+.+.....+... +++....++++..+++.+..
T Consensus 267 ~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~ 300 (407)
T PRK07179 267 AEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIES 300 (407)
T ss_pred HHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhc
Confidence 6666544444433 44566777777777776543
No 41
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.81 E-value=8e-20 Score=183.25 Aligned_cols=210 Identities=20% Similarity=0.232 Sum_probs=144.2
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
+++.++++||++.. .+.++||+ +|.++++++++|||+|++.. ++|.|.- ..+.+.|+...+++..
T Consensus 71 Ae~~aA~~fGAd~t-----~flvnGsT~g~~a~i~a~~~~gd~VLv~R---N~HkSv~-----~alil~ga~Pvyi~p~- 136 (417)
T PF01276_consen 71 AEELAARAFGADKT-----FFLVNGSTSGNQAMIMALCRPGDKVLVDR---NCHKSVY-----NALILSGAIPVYIPPE- 136 (417)
T ss_dssp HHHHHHHHHTESEE-----EEESSHHHHHHHHHHHHHTTTTCEEEEET---T--HHHH-----HHHHHHTEEEEEEEEE-
T ss_pred HHHHHHHhcCCCeE-----EEEecCchHHHHHHHHHhcCCCCEEEEcC---CcHHHHH-----HHHHHcCCeEEEecCC-
Confidence 66789999999984 45567765 99999999999999999977 4555421 2456777766555433
Q ss_pred cCCCC---CCCH-----HHHHHHhhhcC-Cc---EE-EEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 232 DESTG---LVDY-----DMLEKTAILFR-PK---LI-IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 232 ~~~~~---~iD~-----d~le~~i~~~~-pk---lI-i~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
+++.+ .+++ +.|++.++++. .| ++ +++++.+|...|+++|.++|+++|..|++|+||++.+.+....
T Consensus 137 ~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp 216 (417)
T PF01276_consen 137 DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLP 216 (417)
T ss_dssp E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGG
T ss_pred ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCc
Confidence 33333 4666 99999997632 23 35 4555567899999999999999999999999999887766444
Q ss_pred cCCCC-CCc-------EEEECCCccCccc-cEEEEEEeCCC-CchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhh
Q 016668 299 ADPFK-YCD-------VVTTTTHKSLRGP-RGGMIFFKKDP-VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 299 ~~p~~-gaD-------iv~~S~hK~l~Gp-rgG~I~~~~~~-~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
.+.+. ++| +++.|+||++++. ++++|..+++. + -.++++.+.......+|+...+|++.+|.+++.
T Consensus 217 ~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v----~~~~~~~~l~~~~TTSPSY~lmASlD~a~~~m~ 292 (417)
T PF01276_consen 217 RSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIV----DHERVNEALSMHQTTSPSYPLMASLDVARAQME 292 (417)
T ss_dssp TTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCT----THHHHHHHHHHHS-SS--HHHHHHHHHHHHHHS
T ss_pred cchhhccCccccccceeeeechhhcccccccceEEEecCCCcc----cHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHh
Confidence 45566 899 9999999999887 67899998873 2 234555543333456899999999999999884
Q ss_pred CchHHHHHHHHh
Q 016668 369 SPEFKVYQNKSA 380 (385)
Q Consensus 369 ~~~~~~y~~~v~ 380 (385)
.++.++..++.+
T Consensus 293 ~~~G~~l~~~~i 304 (417)
T PF01276_consen 293 EEEGRELLEEAI 304 (417)
T ss_dssp HHHHHHHHHHHH
T ss_pred hhhhHHHHHHHH
Confidence 444444444433
No 42
>PLN00175 aminotransferase family protein; Provisional
Probab=99.81 E-value=5.8e-18 Score=171.59 Aligned_cols=238 Identities=14% Similarity=0.080 Sum_probs=162.9
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhhccccc--cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQFKSLELI--ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~~~l~Li--asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~ 156 (385)
+++++..++++.+..+.+.... ...++|- .++..+++.+++++...+.+. ...|+. ..|.+ +|++..+++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~~Y~~---~~G~~---~Lr~aia~~ 103 (413)
T PLN00175 32 VAKRLEKFKTTIFTQMSSLAIK-HGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KNQYAR---GFGVP---ELNSAIAER 103 (413)
T ss_pred hhHHhhcCCCCHHHHHHHHhhc-CCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CCCcCC---CCCCH---HHHHHHHHH
Confidence 4677888888777655544322 2334444 345556888999988776542 223443 23544 788888888
Q ss_pred HHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC
Q 016668 157 ALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~ 235 (385)
+.+.+|.+.+ +..+|.+++|+ +|+..++.++++|||+|++.+|.|..+.. .+...|..+..++ +++++
T Consensus 104 ~~~~~g~~~~-~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~~~ 172 (413)
T PLN00175 104 FKKDTGLVVD-PEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEA--------TLSMAGAKIKTVT--LRPPD 172 (413)
T ss_pred HHHHhCCCCC-CCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEE--CCccc
Confidence 8888886532 11136666665 69999999999999999999987654421 3456676555444 55445
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCC--CCC-C--
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKY-C-- 305 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p--~~g-a-- 305 (385)
+.+|+++|++.+.. ++|+|+++.++||+ .. ++++|.++|+++|+++++|+++ ..+.+.+...+. +.+ .
T Consensus 173 ~~~~~~~l~~~~~~-~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~s~~~~~~~~~~ 250 (413)
T PLN00175 173 FAVPEDELKAAFTS-KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVY-DKLAFEGDHISMASLPGMYER 250 (413)
T ss_pred CCCCHHHHHHhcCc-CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEeccc-CccccCCcccChhhCCCCcCc
Confidence 78999999998865 78999988888774 33 4788999999999999999997 455544322211 222 1
Q ss_pred cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 306 Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
-|++.|++|+| +|+|.|++++++ ++.+.+...
T Consensus 251 vi~i~SfSK~~~~~G~RiG~~v~~~------~l~~~l~~~ 284 (413)
T PLN00175 251 TVTMNSLGKTFSLTGWKIGWAIAPP------HLTWGVRQA 284 (413)
T ss_pred EEEEecchhhccCcchheeeeEeCH------HHHHHHHHH
Confidence 26789999997 788999999987 566666543
No 43
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.81 E-value=7.4e-19 Score=173.88 Aligned_cols=198 Identities=20% Similarity=0.249 Sum_probs=151.4
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
.+..++++.|++++...+..-+ |+|.+++| |.+.-+.+|+ +|+.+++++|+++.+ .+++.++|++|..++.++
T Consensus 50 ~at~p~~~~Vldam~~~~~~~~--~nPh~~~y-~w~~~~~~E~-aR~~VAklInAd~~d---IiFts~ATEs~Nlvl~~v 122 (428)
T KOG1549|consen 50 QATGPMDPRVLDAMLPYLLEYL--GNPHSRSY-GWKAEDAVEA-AREQVAKLINADPSD---IVFTSGATESNNLVLKGV 122 (428)
T ss_pred CcCCCCCHHHHHHHHHHHHHhh--cCCCcccc-chhhhHHHHH-HHHHHHHHhCCCCCc---EEEeCCchHHHHHHHHHh
Confidence 5677889999999998877655 68888733 5555566776 899999999999863 344455677999999988
Q ss_pred -ccCCC----EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC--
Q 016668 189 -LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (385)
Q Consensus 189 -l~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-- 261 (385)
+.++| +|+.++.+|.++.- + +..+.-.|. ++..++++ +++.+|.+.+++.++. +|++|.+...+
T Consensus 123 ~~~~~~~~~k~iitl~~eH~~v~~-s----~~~l~~~g~--~Vt~lpv~-~~~~~d~~~~~~~i~~-~T~lv~I~~Vnn~ 193 (428)
T KOG1549|consen 123 ARFFGDKTKKHIITLQTEHPCVLD-S----CRALQEEGL--EVTYLPVE-DSGLVDISKLREAIRS-KTRLVSIMHVNNE 193 (428)
T ss_pred hccccccccceEEEecccCcchhH-H----HHHHHhcCe--EEEEeccC-ccccccHHHHHHhcCC-CceEEEEEecccC
Confidence 66788 89998876655421 1 122334454 44444465 5789999999999976 89999876543
Q ss_pred CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCcccc-EEEEEEeC
Q 016668 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKK 328 (385)
Q Consensus 262 ~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gpr-gG~I~~~~ 328 (385)
.+..+|+++|+++|++.|+.+++|+||+.|.+ +-.+. ++|++++|.||++ ||+ .|++++++
T Consensus 194 ~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i-----~vDV~eln~D~~s~s~HK~y-gp~~iGaLYvr~ 257 (428)
T KOG1549|consen 194 IGVLQPVKEIVKICREEGVQVHVDAAQAVGKI-----PVDVQELNADFLSISAHKIY-GPPGIGALYVRR 257 (428)
T ss_pred ccccccHHHHHHHhCcCCcEEEeehhhhcCCc-----cccHHHcCchheeeeccccc-CCCcceEEEEcc
Confidence 35778999999999999999999999998865 22333 8999999999976 676 59999986
No 44
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.81 E-value=3.3e-18 Score=166.05 Aligned_cols=232 Identities=19% Similarity=0.201 Sum_probs=167.8
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC-CCCcceeecCCcHHHHHHHHHHh
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~-~~~~~~V~~~sGs~A~~~a~~al 188 (385)
-+-.++|.|++|+..... +-..|||. +.+ ++-+..++|.++..+.+. .+| .+...+...++..++.++
T Consensus 35 MDf~~pp~i~~Al~~rvd-hGvfGY~~-----~~~---~~~~ai~~w~~~r~~~~i~~e~--i~~~p~VVpgi~~~I~~~ 103 (388)
T COG1168 35 MDFPTPPEIIEALRERVD-HGVFGYPY-----GSD---ELYAAIAHWFKQRHQWEIKPEW--IVFVPGVVPGISLAIRAL 103 (388)
T ss_pred ccCCCCHHHHHHHHHHHh-cCCCCCCC-----CCH---HHHHHHHHHHHHhcCCCCCcce--EEEcCcchHhHHHHHHHh
Confidence 467789999999987764 34457774 222 456667789999988763 344 344444557999999999
Q ss_pred ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF 266 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~ 266 (385)
.+|||.|++..|.|.... ..+...|.++...|+..+...+.||+++||+.+.+.++|++++++|+|| +.+
T Consensus 104 T~~gd~Vvi~tPvY~PF~--------~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvw 175 (388)
T COG1168 104 TKPGDGVVIQTPVYPPFY--------NAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVW 175 (388)
T ss_pred CcCCCeeEecCCCchHHH--------HHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccc
Confidence 999999999998764321 2455667755545543333334789999999998777899999999987 454
Q ss_pred ---CHHHHHHHHHHcCcEEEEeccccccccccCcccCC---CC--CCc--EEEECCCccC--ccccEEEEEEeCCCCchh
Q 016668 267 ---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK--YCD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 267 ---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p---~~--gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~ 334 (385)
++++|.+||.+||++||+|+.| +.++..|....| ++ .+| +.++|.+|+| +|.+.+.++..++
T Consensus 176 t~eeL~~i~elc~kh~v~VISDEIH-aDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~----- 249 (388)
T COG1168 176 TKEELRKIAELCLRHGVRVISDEIH-ADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR----- 249 (388)
T ss_pred cHHHHHHHHHHHHHcCCEEEeeccc-ccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH-----
Confidence 5888999999999999999999 688877732222 23 456 6788999997 7888877766665
Q ss_pred HHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 335 ~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+++.+..+.+-...+++|+...+.|.-+|+++
T Consensus 250 ~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~ 281 (388)
T COG1168 250 ELRAKFLKRLKRNGLHGPSALGIIATEAAYNQ 281 (388)
T ss_pred HHHHHHHHHHHHhcCCCCchHHHHHHHHHHHh
Confidence 56555544444455677888888887777663
No 45
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.80 E-value=3.9e-18 Score=170.09 Aligned_cols=216 Identities=17% Similarity=0.149 Sum_probs=145.3
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 190 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~ 190 (385)
-+++|+.|++++.....+ | + + .+++.+.++++++++||.+. .+.+.++|.|++.++.++++
T Consensus 22 ~s~~~~~v~~a~~~~~~~-~---------~-~---~~~~~~~~~~~~a~~~g~~~-----~~~~~g~t~al~~al~al~~ 82 (363)
T TIGR01437 22 VSTVSDEVADAQKRGAQN-Y---------F-E---IKELVNKTGEYIANLLGVED-----AVIVSSASAGIAQSVAAVIT 82 (363)
T ss_pred CCCCCHHHHHHHHHHHhc-C---------C-C---HHHHHHHHHHHHHHhhCCCe-----EEEEcCHHHHHHHHHHHHhc
Confidence 345799999999876533 2 1 2 22555667888999999875 25677888899999999999
Q ss_pred CCC---------------EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEE
Q 016668 191 PHD---------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (385)
Q Consensus 191 pGD---------------~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklI 255 (385)
||| +|+++.+.+ ..++. .....+.+.|..+ +.++. ++.+|++++++.+++ ++|+|
T Consensus 83 ~Gd~~~~~~~~~s~~~~~eVi~~~~~~---~~~~~-~~~~~~~~~g~~~--v~v~~---~~~~d~~~le~ai~~-~t~ai 152 (363)
T TIGR01437 83 RGNRYLVENLHDSKIEVNEVVLPKGHN---VDYGA-PVETMVRLGGGKV--VEAGY---ANECSAEQLEAAITE-KTAAI 152 (363)
T ss_pred CCCcchhhcccccccccceEEEECccc---hhcCC-chHHHHHhcCCeE--EEEcC---CCCCCHHHHHHhcCh-hceEE
Confidence 999 666655211 11110 0001234566543 44333 346999999999975 78876
Q ss_pred E-EcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCccccEEEEEEeCCCC
Q 016668 256 I-AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (385)
Q Consensus 256 i-~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~ 331 (385)
+ ++.++ ++...|+++|.++|+++|+++++|++|...+ ..... ++|++++|+||+|+||++|+++.++
T Consensus 153 ~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~~~g~D~~~~S~~K~l~gp~~G~l~~~~--- 223 (363)
T TIGR01437 153 LYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYYRLGADLVIYSGAKAIEGPTSGLVLGKK--- 223 (363)
T ss_pred EEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHHHcCCCEEEEeCCcccCCCceEEEEEcH---
Confidence 5 44433 3467899999999999999999999995221 11122 6899999999999999999988765
Q ss_pred chhHHHHHHhhcc---CCCccCCChHHHHHHHHHHHHHhhC
Q 016668 332 LGVELESAINNAV---FPGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 332 ~~~~~~~~i~~~~---fp~~qg~p~~~~iaala~Al~e~~~ 369 (385)
++.+.+.... ....+. ....++++..|++++..
T Consensus 224 ---~~i~~~~~~~~~~~~~~~~--~~~~~~gl~aAl~~~~~ 259 (363)
T TIGR01437 224 ---KYIEWVKLQSKGIGRAMKV--GKENILGLTAALEQYLS 259 (363)
T ss_pred ---HHHHHHHhccCCCcceecc--CHHHHHHHHHHHHHHHc
Confidence 4555443211 111121 12347888888887754
No 46
>PLN03032 serine decarboxylase; Provisional
Probab=99.80 E-value=1.9e-17 Score=165.29 Aligned_cols=254 Identities=17% Similarity=0.150 Sum_probs=166.9
Q ss_pred ccccCCCC-CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCC-CcceeecCCcHHHHHH
Q 016668 106 ELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK-WGVNVQPLSGSPANFE 183 (385)
Q Consensus 106 ~Liasen~-~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~-~~~~V~~~sGs~A~~~ 183 (385)
.+-.+.|. ..+.+++++...+.+.+ |+|.+.+..|.. ..++|+.+.++++++||+++++ || +++++||+||+.
T Consensus 26 ~~gy~~~~~~~~~~~~~~~~~~~~~~--gnP~s~~~~g~~-a~~~e~~v~~~ia~llg~~~~~~~G--~fTsGGTEaNl~ 100 (374)
T PLN03032 26 HFGYPYNLDFDYGELSQLMKYSINNL--GDPFIESNYGVH-SRQFEVGVLDWFARLWELEKDEYWG--YITTCGTEGNLH 100 (374)
T ss_pred ccCCCchhccChHHHHHHHHhcccCC--CCCcccCCCCcc-HHHHHHHHHHHHHHHhCCCCccCCE--EEeCchHHHHHH
Confidence 33344444 45567888887766554 677765443433 4478888999999999998654 43 557788999998
Q ss_pred HHHHhc--cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEE--
Q 016668 184 VYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA-- 257 (385)
Q Consensus 184 a~~all--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~-- 257 (385)
++.+.. .++++|+++..+| .+. .+.+...|..+..++ ++ .++.+|+++|++.+++. +|.+|++
T Consensus 101 al~~ar~~~~~~~vi~s~~~H---~Sv-----~kaa~~lg~~~~~V~--~d-~~g~id~~~L~~~i~~~~~~~~lvv~ta 169 (374)
T PLN03032 101 GILVGREVFPDGILYASRESH---YSV-----FKAARMYRMEAVKVP--TL-PSGEIDYDDLERALAKNRDKPAILNVNI 169 (374)
T ss_pred HHHHHHHhCCCcEEEeCCCce---eHH-----HHHHHHcCCCCeEee--eC-CCCcCcHHHHHHHHHHcCCCCEEEEEEe
Confidence 887653 3566788776544 221 134455666555555 55 46899999999999753 4667665
Q ss_pred cCCCCCCCCCHHHHHHHHHHcC-----cEEEEecccccccccc-Cc-ccCCCC-CCcEEEECCCccCccccE-EEEEEeC
Q 016668 258 GASAYPRDFDYPRMRQIADAVG-----ALLMMDMAHISGLVAA-SV-VADPFK-YCDVVTTTTHKSLRGPRG-GMIFFKK 328 (385)
Q Consensus 258 ~~s~~~~~~dl~~I~~ia~~~g-----a~livD~ah~~Gli~~-g~-~~~p~~-gaDiv~~S~hK~l~Gprg-G~I~~~~ 328 (385)
+.+.+|...|+++|+++|+++| +|+++|+|++.+.+.- .. ....+. ++|.++.|+||++..|.| |++++++
T Consensus 170 gtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~ 249 (374)
T PLN03032 170 GTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMPCGVALTRK 249 (374)
T ss_pred cCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcCeEEEEEEc
Confidence 4556788899999999999996 5999999987665421 11 111222 689999999997765987 8888887
Q ss_pred CCCchhHHHHHHhh-cc-----CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhc
Q 016668 329 DPVLGVELESAINN-AV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSAC 381 (385)
Q Consensus 329 ~~~~~~~~~~~i~~-~~-----fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~ 381 (385)
+ +.+.+.. .. -+.++|+-.-...+++=.+|+..=.++|++..++.++
T Consensus 250 ~------~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~ 302 (374)
T PLN03032 250 K------HVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMR 302 (374)
T ss_pred h------hhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4 3333321 11 1234555443444444556666555566655555544
No 47
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.80 E-value=2.8e-18 Score=170.98 Aligned_cols=170 Identities=22% Similarity=0.267 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcc
Q 016668 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (385)
Q Consensus 144 ~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (385)
+.++++|+ .++++||.++ .+.++|||.|+.+++.++ ++|||+|+++...+.+.. ..+...|.
T Consensus 25 ~~~~~fE~----~~a~~~g~~~-----~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~--------~ai~~~G~ 87 (363)
T PF01041_consen 25 PYVEEFEK----EFAEYFGVKY-----AVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATA--------SAILWAGA 87 (363)
T ss_dssp HHHHHHHH----HHHHHHTSSE-----EEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHH--------HHHHHTT-
T ss_pred HHHHHHHH----HHHHHhCCCe-----EEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHH--------HHHHHhcc
Confidence 56777876 5889999887 478899999999999999 899999999876543321 24556676
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 302 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~ 302 (385)
+++.++++++++.+|++++++.+++ ++|+|++. +.+|...|+++|.++|+++|++||.|+||+.|....|. ++
T Consensus 88 --~pv~~Di~~~~~~id~~~~~~~i~~-~t~ai~~~-h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~---~~ 160 (363)
T PF01041_consen 88 --EPVFVDIDPETLNIDPEALEKAITP-KTKAILVV-HLFGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGR---PV 160 (363)
T ss_dssp --EEEEE-BETTTSSB-HHHHHHHHHT-TEEEEEEE--GGGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTE---ET
T ss_pred --EEEEEeccCCcCCcCHHHHHHHhcc-CccEEEEe-cCCCCcccHHHHHHHHHHcCCcEEEccccccCceeCCE---ec
Confidence 5667778888999999999999976 67888764 34666779999999999999999999999988765553 22
Q ss_pred C-CCcEEEECCC--ccCccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 303 K-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 303 ~-gaDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
. ..|+.++||| |.+....||+|+++++ ++.+++..
T Consensus 161 G~~gd~~~fSf~~~K~i~~geGG~v~~~~~-----~~~~~~~~ 198 (363)
T PF01041_consen 161 GSFGDIAIFSFHPTKIITTGEGGAVVTNDP-----ELAERARA 198 (363)
T ss_dssp TSSSSEEEEESSTTSSS-SSS-EEEEESTH-----HHHHHHHH
T ss_pred cCCCCceEecCCCCCCCcCCCCeeEEecHH-----HHHHHhhh
Confidence 2 5699999997 8898889999999997 77777654
No 48
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.80 E-value=5.6e-18 Score=168.19 Aligned_cols=233 Identities=15% Similarity=0.073 Sum_probs=156.0
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
.+-+.|....+++.|++++.... . + + +.++.+.++ .+++.+++++|+++++- ..+.+.|||.|+..
T Consensus 4 ~~l~~pgp~~~~~~v~~~~~~~~-~-----~-----~-~~~~~~~~~-~~r~~la~l~~~~~~~~-~i~~t~~~t~al~~ 69 (363)
T TIGR02326 4 YLLLTPGPLTTSRTVKEAMLFDW-C-----T-----W-DSDYNIVVE-QIRQQLLALATAEEGYT-SVLLQGSGTFAVEA 69 (363)
T ss_pred eeEecCCCCCCCHHHHHHhCCCC-C-----C-----C-ChHHHHHHH-HHHHHHHHHhCCCCCce-EEEEcCCCHHHHHH
Confidence 34577888899999999976432 1 1 1 234444554 47889999999975211 23556778899999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-CCcEEEEcC--C
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGA--S 260 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-~pklIi~~~--s 260 (385)
++.+++.+||++++..+ +.+...+ ...+...|..+..++ .+ +++.+|++++++.++.. +++++.+.. +
T Consensus 70 ~~~~l~~~~~~vlv~~~---~~~~~~~---~~~a~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~ 140 (363)
T TIGR02326 70 VIGSAVPKDGKLLVVIN---GAYGARI---VQIAEYLGIPHHVVD--TG-EVEPPDVVEVEAILAADPAITHIALVHCET 140 (363)
T ss_pred HHHhcCCCCCeEEEEeC---ChhhHHH---HHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCccEEEEEeecC
Confidence 99999999998776543 1111110 012345676666555 33 35679999999998653 356665433 3
Q ss_pred CCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 261 ~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
.+|...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||+|.||.| |+++.+++ ..
T Consensus 141 ~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~-----~~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~------~~ 209 (363)
T TIGR02326 141 TTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGI-----PIDIAELHIDYLISSANKCIQGVPGFGFVIARQA------EL 209 (363)
T ss_pred CccccCcHHHHHHHHHHcCCEEEEEccccccCc-----ccchhhcCccEEEecCccccccCCcceEEEECHH------HH
Confidence 366788999999999999999999999876532 22333 789999999999988887 99988874 33
Q ss_pred HHHhhccC----------------CC-ccCCChHHHHHHHHHHHHHhhCc
Q 016668 338 SAINNAVF----------------PG-LQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 338 ~~i~~~~f----------------p~-~qg~p~~~~iaala~Al~e~~~~ 370 (385)
+++..... ++ ...++....+.++..|++++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~ 259 (363)
T TIGR02326 210 AACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKE 259 (363)
T ss_pred HHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 32211000 01 11145667888888888877554
No 49
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=5.7e-18 Score=169.82 Aligned_cols=191 Identities=18% Similarity=0.170 Sum_probs=137.6
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHD 193 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pGD 193 (385)
++.-.+++...+...+. +.| +...++|+ ++++++|+++ .|.++|||.|+..++.++ ++|||
T Consensus 13 ~~~e~~~~~~~l~~~~~--------~~g-~~~~~le~----~la~~~g~~~-----~v~~~sgt~al~lal~al~~~~Gd 74 (379)
T PRK11658 13 GDEELAAVKEVLRSGWI--------TTG-PKNQALEQ----AFCQLTGNQH-----AIAVSSATAGMHITLMALGIGPGD 74 (379)
T ss_pred CHHHHHHHHHHHHcCCc--------cCC-HhHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCC
Confidence 34456666655543221 112 44556665 5888999976 366789999999999999 89999
Q ss_pred EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHH
Q 016668 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ 273 (385)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ 273 (385)
+|+++++.|.++.. .+...|..+..+ +++++++.+|++++++.+.+ ++|+|+...+ +|...|+++|.+
T Consensus 75 ~Viv~~~~~~~~~~--------~~~~~G~~~v~v--d~~~~~~~~d~~~l~~~i~~-~tkav~~~~~-~G~~~d~~~i~~ 142 (379)
T PRK11658 75 EVITPSLTWVSTLN--------MIVLLGATPVMV--DVDRDTLMVTPEAIEAAITP-RTKAIIPVHY-AGAPADLDAIRA 142 (379)
T ss_pred EEEECCCcHHHHHH--------HHHHcCCEEEEE--ecCCCcCCcCHHHHHHhccc-CCeEEEEeCC-CCCcCCHHHHHH
Confidence 99999986654321 334567654444 46656678999999999865 7898875443 677889999999
Q ss_pred HHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 274 IADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 274 ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
+|+++|+++++|++|+.|....|.....+ +.+++.++.+|.+.+++||+++++++ ++.+++.
T Consensus 143 ~a~~~gi~vi~D~a~a~g~~~~~~~~g~~-g~~~~Sf~~~K~l~~g~GG~v~~~~~-----~~~~~~~ 204 (379)
T PRK11658 143 IGERYGIPVIEDAAHAVGTYYKGRHIGAR-GTAIFSFHAIKNITCAEGGLVVTDDD-----ELADRLR 204 (379)
T ss_pred HHHHcCCeEEEECCCccCCeECCeecCCC-CCEEEeCCCCCcCcccCceEEEECCH-----HHHHHHH
Confidence 99999999999999988876544321111 44666777779999999999998765 5655554
No 50
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.80 E-value=5.9e-18 Score=169.39 Aligned_cols=173 Identities=19% Similarity=0.200 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcc
Q 016668 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (385)
Q Consensus 144 ~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (385)
+..+++|+ .+++++|.++ .+.++||+.|+..++.++ ++|||+|+++++.+.+.. ..+...|.
T Consensus 29 ~~~~~le~----~la~~~g~~~-----~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~--------~~~~~~G~ 91 (380)
T TIGR03588 29 PTVPAFEE----ALAEYVGAKY-----AVAFNSATSALHIACLALGVGPGDRVWTTPITFVATA--------NCALYCGA 91 (380)
T ss_pred hhHHHHHH----HHHHHHCCCe-----EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--------HHHHHcCC
Confidence 33455654 5888999976 356788999999999999 899999999988654331 13345676
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
.+. .++++++++.+|++++++.+++ .++|+|++.. .+|...|+++|.++|+++|++||+|++|+.|....+...
T Consensus 92 ~~~--~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~-~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~ 168 (380)
T TIGR03588 92 KVD--FVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD-FAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPV 168 (380)
T ss_pred EEE--EEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC-CCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeC
Confidence 544 4446656788999999999962 3688887643 367778999999999999999999999998865433211
Q ss_pred CCCCCCcEEEECCC--ccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 300 DPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 300 ~p~~gaDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
...+++|+.++|+| |++.++.||+++++++ ++.+++.
T Consensus 169 g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~-----~~~~~~~ 207 (380)
T TIGR03588 169 GNCRYADATVFSFHPVKIITTAEGGAVTTNDE-----ELAERMR 207 (380)
T ss_pred CCccccceEEEecCCCCcccccCceEEEECCH-----HHHHHHH
Confidence 11124599999998 8898889999999876 5666554
No 51
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.79 E-value=5.4e-18 Score=168.99 Aligned_cols=229 Identities=24% Similarity=0.292 Sum_probs=170.0
Q ss_pred cccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 107 Liasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G~~-~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
..+|+||. +|.++++....+. +|.-|..++|...|+. ...+||+ ++++++|.+. .+.++||..||
T Consensus 43 nf~SNdYLGLa~~~~~~~a~~~~~~-~~g~g~~gsR~i~G~~~~h~~LE~----~lA~f~g~e~-----al~f~SGy~AN 112 (388)
T COG0156 43 NFCSNDYLGLASHPELIEAAKAAIR-RYGVGAGGSRLISGTSDLHVELEE----ELADFLGAEA-----ALLFSSGFVAN 112 (388)
T ss_pred eeeccCcccccCCHHHHHHHHHHHH-HhCCCCCCcCcccCCcHHHHHHHH----HHHHHhCCCc-----EEEEcccchhH
Confidence 34789997 8999999887764 5666788888777764 4456765 6899999997 37789999999
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEE
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLII 256 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi 256 (385)
..++.+|+++||.|+...+.|.+-. ..++..+.. .+.|. +.|+++||+++++. ++++|+
T Consensus 113 ~~~i~~l~~~~dli~~D~lnHASii--------dG~rls~a~--~~~f~------HnD~~~Le~~l~~~~~~~~~~~~Iv 176 (388)
T COG0156 113 LGLLSALLKKGDLIFSDELNHASII--------DGIRLSRAE--VRRFK------HNDLDHLEALLEEARENGARRKLIV 176 (388)
T ss_pred HHHHHHhcCCCcEEEEechhhhhHH--------HHHHhCCCc--EEEec------CCCHHHHHHHHHhhhccCCCceEEE
Confidence 9999999999999999887654311 234555553 34443 46999999999762 246777
Q ss_pred EcC--CCCCCCCCHHHHHHHHHHcCcEEEEecccccccccc-Cc-ccCC--CC--CCcEEEECCCccCccccEEEEEEeC
Q 016668 257 AGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VADP--FK--YCDVVTTTTHKSLRGPRGGMIFFKK 328 (385)
Q Consensus 257 ~~~--s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~~p--~~--gaDiv~~S~hK~l~GprgG~I~~~~ 328 (385)
++. |..|...|+++|++++++||++|++|+||+.|+... |. ...- +. ..||+++|+.|.| |--||++.++.
T Consensus 177 tegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAl-Gs~Gg~v~g~~ 255 (388)
T COG0156 177 TEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKAL-GSSGGYIAGSA 255 (388)
T ss_pred EeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhh-cccCceeeCcH
Confidence 753 455677899999999999999999999999998763 21 1111 11 3489999999998 46889999988
Q ss_pred CCCchhHHHHHHhhccCCCccCC-ChHHHHHHHHHHHHHhh
Q 016668 329 DPVLGVELESAINNAVFPGLQGG-PHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~-p~~~~iaala~Al~e~~ 368 (385)
.+.+.+.....+.+.++ ..+...++...+++.+.
T Consensus 256 ------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~ 290 (388)
T COG0156 256 ------ALIDYLRNRARPFIFSTALPPAVAAAALAALRILE 290 (388)
T ss_pred ------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHH
Confidence 68888776666666654 44455556666777664
No 52
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.79 E-value=8.5e-18 Score=168.09 Aligned_cols=234 Identities=16% Similarity=0.220 Sum_probs=157.8
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceeecCCc-HHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSG-SPANFEVYT 186 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~-~~~~~~~~V~~~sG-s~A~~~a~~ 186 (385)
+...++++.|++++...+.+.+ ++|++.+..+......+++ +++.+.+.+|+ +++ +|.+++| ++++..++.
T Consensus 6 aa~~~~~~~v~~~~~~~~~~~~--~n~~~~~~~~~~~~~~l~~-a~~~~~~~~~~~~~~----~i~~t~g~teal~~~~~ 78 (382)
T TIGR03403 6 NATTMLDPKVKELMDPFFCDIY--GNPNSLHQFGTATHPAIAE-ALDKLYKGINARDLD----DIIITSCATESNNWVLK 78 (382)
T ss_pred cCCCCCCHHHHHHHHHHHHhcC--cCCccccHHHHHHHHHHHH-HHHHHHHHcCcCCCC----eEEEeCCHHHHHHHHHH
Confidence 4567788999999988877655 3555433334455556766 45566777887 343 4555555 569888888
Q ss_pred Hhc-----cC-CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 187 AIL-----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 187 all-----~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
++. ++ ||+|++.+.+|.++.... ..+...|..+..++ ++ +++.+|++++++.+++ ++++|++..+
T Consensus 79 ~~~~~~~~~~~~~~vi~~~~e~ps~~~~~-----~~~~~~G~~v~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~ 149 (382)
T TIGR03403 79 GVYFDEILKGGKNHIITTEVEHPAVRATC-----AFLESLGVEVTYLP--IN-EQGTITAEQVREAITE-KTALVSVMWA 149 (382)
T ss_pred HHHHhhcccCCCCEEEEcCCccHHHHHHH-----HHHHHCCCEEEEEe--cC-CCCCCCHHHHHHhccc-CCeEEEEEcc
Confidence 762 56 478999887765543211 12334566555555 44 3578999999999865 6888888765
Q ss_pred CC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC-C-CCcEEEECCCccCccccE-EEEEEeCCCCchhH
Q 016668 261 AY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVE 335 (385)
Q Consensus 261 ~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~-~-gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~ 335 (385)
++ |...|+++|.++|+++|+++++|++|..|.. +..+ + ++|++++|+||+ .||.| |+++.+++. .
T Consensus 150 ~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~----~ 219 (382)
T TIGR03403 150 NNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKI-----PVDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGV----E 219 (382)
T ss_pred cCCCccccCHHHHHHHHHHcCCEEEEechhhcCCC-----ccCccccCCCEEEEcchhh-CCCCceEEEEECCCC----C
Confidence 54 4678999999999999999999999976643 2222 2 799999999996 58887 888877752 1
Q ss_pred HHHHHh--hccCCCccCCChHHHHHHHHHHHHHhh
Q 016668 336 LESAIN--NAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 336 ~~~~i~--~~~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
+...+. ........|+++...+.+++.|++...
T Consensus 220 ~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~ 254 (382)
T TIGR03403 220 LTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN 254 (382)
T ss_pred CCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHH
Confidence 111110 001111246788888989999987653
No 53
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.79 E-value=1.4e-17 Score=163.87 Aligned_cols=230 Identities=20% Similarity=0.194 Sum_probs=151.0
Q ss_pred cccccCCC---CCcHHHHHHHhhHhhccCCCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 105 LELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 105 l~Liasen---~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~-~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
|++...+. ..++.+++++...+. +|..++++.++..|. +..++ .++.+++++|.+. .+.+++|+.+
T Consensus 19 id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~~~~~-----~i~~~~G~~~ 88 (360)
T TIGR00858 19 LNFSSNDYLGLASHPEVIQAAQQGAE-QYGAGSTASRLVSGNSPLHEE----LEEELAEWKGTEA-----ALLFSSGYLA 88 (360)
T ss_pred EecccCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCcHHHHH----HHHHHHHHhCCCC-----EEEECchHHH
Confidence 45544432 245899999987764 454455544333343 32333 4456788888643 5778899988
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc---CCcEEEE
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIA 257 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~---~pklIi~ 257 (385)
+..++.++++|||+|++.++.|.++.. .+...|..+..++ .+|++++++.++.. ++++|++
T Consensus 89 ~~~~l~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~~~~~~~~~~~~v~~ 152 (360)
T TIGR00858 89 NVGVISALVGKGDLILSDALNHASLID--------GCRLSGARVRRYR--------HNDVEHLERLLEKNRGERRKLIVT 152 (360)
T ss_pred HHHHHHHhCCCCCEEEEEccccHHHHH--------HHHhcCCceEEec--------CCCHHHHHHHHHHcccCCCeEEEE
Confidence 888888889999999998876654321 2344555433322 36899999988652 4678887
Q ss_pred cCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccC-c--cc-CCCC--CCcEEEECCCccCccccEEEEEEeCC
Q 016668 258 GASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAAS-V--VA-DPFK--YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 258 ~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g-~--~~-~p~~--gaDiv~~S~hK~l~GprgG~I~~~~~ 329 (385)
+..++ +...|+++|.++|+++|+++++|++|..|..... . .+ ..++ +.|++++|+||+| |++||++++++
T Consensus 153 ~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~-~~~gG~~~~~~- 230 (360)
T TIGR00858 153 DGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYGAYVAGSQ- 230 (360)
T ss_pred eCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhh-hccCcEEEcCH-
Confidence 76544 4467999999999999999999999976643211 1 00 1121 5678999999988 45889998876
Q ss_pred CCchhHHHHHHhhccCCC-ccCCChHHHHHHHHHHHHHh
Q 016668 330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 330 ~~~~~~~~~~i~~~~fp~-~qg~p~~~~iaala~Al~e~ 367 (385)
++.+.+.....+. ..++++...+++...+++..
T Consensus 231 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 264 (360)
T TIGR00858 231 -----ALIDYLINRARTLIFSTALPPAVAAAALAALELI 264 (360)
T ss_pred -----HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH
Confidence 5666665433332 23345556666666677643
No 54
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.79 E-value=1.1e-17 Score=165.78 Aligned_cols=210 Identities=19% Similarity=0.136 Sum_probs=137.9
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCE
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDR 194 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~ 194 (385)
+|.+.++....+. +|. |+. ++.+..++++++++|++.++ .+.+++|+.||..++.++++|||+
T Consensus 35 ~~~~~~~~~~~~~-~~~----------g~~---~~~~~Le~~lA~~~g~~~e~---ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 35 GFKIDEEDLELLE-TYV----------GPA---IFEEKVQELGREHLGGPEEK---ILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred ChhHHHHHHHHHH-Hhc----------CCH---HHHHHHHHHHHHHcCCCcce---EEEECCHHHHHHHHHHHhCCCCCE
Confidence 7888888766543 341 222 34444556799999996531 355667788999999999999999
Q ss_pred EeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCC---CCHHH
Q 016668 195 IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRD---FDYPR 270 (385)
Q Consensus 195 Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~---~dl~~ 270 (385)
|+++.++...|.++. ..+.+.|..+ +. . .|+++++. . .++++|++..++ .+.. .|+++
T Consensus 98 Vli~~~d~p~~~s~~-----~~~~l~ga~~--~~--~------~~l~~l~~-~--~~~~lIiitg~s~~G~v~~~~~L~~ 159 (346)
T TIGR03576 98 VVHYLPEKPAHPSIP-----RSCKLAGAEY--FE--S------DELSELKK-I--DGTSLVVITGSTMDLKVVSEEDLKR 159 (346)
T ss_pred EEECCCCCCCchhHH-----HHHHHcCCEE--ec--c------CCHHHHhh-C--cCceEEEEECCCCCCcccCHHHHHH
Confidence 998655444554432 1344556532 22 1 24555433 2 257877764433 2333 57899
Q ss_pred HHHHHHHcCcEEEEeccccccccc-cCcccCCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccCCCc
Q 016668 271 MRQIADAVGALLMMDMAHISGLVA-ASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGL 348 (385)
Q Consensus 271 I~~ia~~~ga~livD~ah~~Gli~-~g~~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~ 348 (385)
|+++|+++|++|++|++|..|... .+.. .... +.|++++|+||+|+|+|+|++++++ ++.+.+.....+..
T Consensus 160 i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~~~~~divv~s~SKalaG~r~G~v~~~~------~li~~l~~~~~~~~ 232 (346)
T TIGR03576 160 VIKQAKSKEAIVLVDDASGARVRRLYGQP-PALDLGADLVVTSTDKLMDGPRGGLLAGRK------ELVDKIKSVGEQFG 232 (346)
T ss_pred HHHHHHHcCCEEEEECCccccccccCCCC-CHHHcCCcEEEeccchhccccceEEEEeCH------HHHHHHHHhhcCcc
Confidence 999999999999999999876532 1211 1122 5789999999999999999999988 67777776655544
Q ss_pred cCCChHHHHHHHHHHHHHh
Q 016668 349 QGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 349 qg~p~~~~iaala~Al~e~ 367 (385)
.+.+.. ..++...+|+..
T Consensus 233 ~s~~~~-~~~aa~~aL~~~ 250 (346)
T TIGR03576 233 LEAQAP-LLAAVVRALEEF 250 (346)
T ss_pred cCccHH-HHHHHHHHHhhc
Confidence 433333 455556677653
No 55
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.79 E-value=2.2e-17 Score=163.99 Aligned_cols=206 Identities=13% Similarity=0.099 Sum_probs=141.2
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCC-CC---CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RY---YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~-r~---~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
++-|-+.-++.+.+++++.....+ + +.+.. .. ..+.+.+.++ ++.+++++|++. .+.+.++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~l----~~~la~~~g~~~-----i~~~~g~t~a 71 (361)
T cd06452 4 IDPIQRGGRLTPEARKALIEWGDG-Y--SVCDFCRGRLDEIEKPPIKDF----HHDLAEFLGMDE-----ARVTPGAREG 71 (361)
T ss_pred CChhhcCCCCCHHHHHHHHHHhcc-c--CCccccccccccccCchHHHH----HHHHHHHcCCce-----EEEeCCHHHH
Confidence 445667888899999998866521 1 22211 00 1122333444 456889999943 2444556679
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhh------cCCc
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL------FRPK 253 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~------~~pk 253 (385)
+..++.++++|||+|++.++.|.+.. ..+...|..+..++ .+.+ ++.+|++++++.+++ .+++
T Consensus 72 l~~~l~~~~~~gd~Vl~~~~~~~~~~--------~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~ 141 (361)
T cd06452 72 KFAVMHSLCEKGDWVVVDGLAHYTSY--------VAAERAGLNVREVP--NTGHPEYHITPEGYAEVIEEVKDEFGKPPA 141 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCcchHHH--------HHHHhcCCEEEEEe--cCCCCCcccCHHHHHHHHHHHhhccCCCce
Confidence 99999999999999999876543321 12445676555555 4432 348999999998853 2678
Q ss_pred EEEEcCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCcc-ccEEEEEEeCC
Q 016668 254 LIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKD 329 (385)
Q Consensus 254 lIi~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~ 329 (385)
+|+++.+++ +...|+++|.++|+++|+++++|++|+.|... ....+ ++|++++|+||+|.+ +++|++++++
T Consensus 142 lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~----~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~- 216 (361)
T cd06452 142 LALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMP----VSGKELGADFIVGSGHKSMAASAPIGVLATTE- 216 (361)
T ss_pred EEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcC----CCHHHcCCCEEEecCCccccCCCCeEEEEECH-
Confidence 988877655 46789999999999999999999999765321 11122 689999999999854 4679999887
Q ss_pred CCchhHHHHHHhh
Q 016668 330 PVLGVELESAINN 342 (385)
Q Consensus 330 ~~~~~~~~~~i~~ 342 (385)
++.+++..
T Consensus 217 -----~~~~~l~~ 224 (361)
T cd06452 217 -----EWADIVFR 224 (361)
T ss_pred -----HHHHHHhc
Confidence 56666644
No 56
>PRK08960 hypothetical protein; Provisional
Probab=99.79 E-value=3.6e-17 Score=164.06 Aligned_cols=237 Identities=14% Similarity=0.070 Sum_probs=155.2
Q ss_pred hhhcccCChHHHHHHHHHHHHh----hhccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~----~~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~ 153 (385)
+.+++.+.+..+..+.+...+. ..-++|-.+++ .+++.+++++.+.+.+.. .+|+. ..|.+ ++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~Y~~---~~g~~---~lr~~i 78 (387)
T PRK08960 6 SRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAEPIVAAGQAALAAGH-TRYTA---ARGLP---ALREAI 78 (387)
T ss_pred hhHHHhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CccCC---CCCCH---HHHHHH
Confidence 4556666676565554443332 13355554433 468999999988776421 13332 12443 677777
Q ss_pred HHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++++.+.+|.+.+ . -+|.+++| ++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++
T Consensus 79 a~~~~~~~g~~~~-~-~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~ 146 (387)
T PRK08960 79 AGFYAQRYGVDVD-P-ERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRH--------FLRLVEGAAQLVP--VG 146 (387)
T ss_pred HHHHHHHhCCCCC-h-hhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHH--------HHHhcCCeEEEEe--cC
Confidence 7777777675421 1 14556665 569999999999999999999997765432 2345566555555 44
Q ss_pred CC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CC
Q 016668 233 ES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (385)
Q Consensus 233 ~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-ga 305 (385)
.+ ++.+|++++++.+++ +++++++..++|| ...+ +++|+++|+++|+++++|+++ .++...+..++.+. ..
T Consensus 147 ~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y-~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08960 147 PDSRYQLTPALVERHWNA-DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIY-HGLTYGVDAASVLEVDD 224 (387)
T ss_pred cccCCCCCHHHHHHHhCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCChhhccC
Confidence 33 347999999998865 5777777777776 3444 567778899999999999996 45554332222233 23
Q ss_pred c-EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 306 D-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 306 D-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+ +++.|++|.+ +|.|.|++++++ ++.+.+...
T Consensus 225 ~vi~~~S~SK~~g~~GlRiG~~~~~~------~~~~~~~~~ 259 (387)
T PRK08960 225 DAFVLNSFSKYFGMTGWRLGWLVAPP------AAVPELEKL 259 (387)
T ss_pred CEEEEeecccccCCcccEEEEEEcCH------HHHHHHHHH
Confidence 4 6789999987 788999999987 566666543
No 57
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.79 E-value=1.4e-17 Score=165.44 Aligned_cols=240 Identities=13% Similarity=0.050 Sum_probs=161.4
Q ss_pred ccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHH
Q 016668 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (385)
Q Consensus 106 ~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~ 185 (385)
-++|....+++.|++++.... .. .+.++.+.++ .+++.+++++|++++. .+.+.+.|||.|+..++
T Consensus 8 ~~~pgP~~~~~~~~~a~~~~~-~~-----------~~~~~~~~~~-~~~~~l~~l~~~~~~~-~~i~~~~~gt~~l~~~~ 73 (368)
T PRK13479 8 LLTPGPLTTSRTVREAMLRDW-GS-----------WDDDFNALTA-SVRAKLVAIATGEEGY-TCVPLQGSGTFSVEAAI 73 (368)
T ss_pred eecCCCCCCCHHHHHHhCCCC-CC-----------CChHHHHHHH-HHHHHHHHHhCCCCCc-eEEEEcCCcHHHHHHHH
Confidence 467888899999999987543 11 1223444444 4788899999996421 12345668899999999
Q ss_pred HHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-CCcEEEEcCCC--C
Q 016668 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASA--Y 262 (385)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-~pklIi~~~s~--~ 262 (385)
.++..+||+|++.++. ++.+.+ ...+...|..+..++ .+ +++.+|++++++.++.. ++++|++..++ +
T Consensus 74 ~~l~~~~~~vlv~~~~---~~~~~~---~~~~~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~t 144 (368)
T PRK13479 74 GSLVPRDGKVLVPDNG---AYGARI---AQIAEYLGIAHVVLD--TG-EDEPPDAAEVEAALAADPRITHVALVHCETTT 144 (368)
T ss_pred HhccCCCCeEEEEeCC---chHHHH---HHHHHHcCCcEEEEE--CC-CCCCCCHHHHHHHHHhCCCCcEEEEEcccCcc
Confidence 9999999999987642 221110 012345676666665 33 24579999999988642 35667666554 4
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
+...|+++|.++|+++|+++++|++|..|.. +.++. ++|++++|+||++.||.| |+++.++ ++.++
T Consensus 145 G~~~~~~~i~~l~~~~~~~livDa~~~~g~~-----~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~------~~~~~ 213 (368)
T PRK13479 145 GILNPLDEIAAVAKRHGKRLIVDAMSSFGAI-----PIDIAELGIDALISSANKCIEGVPGFGFVIARR------SELEA 213 (368)
T ss_pred ccccCHHHHHHHHHHcCCEEEEEcccccCCc-----cccccccCceEEEecCccccccCCCceEEEECH------HHHHH
Confidence 5778999999999999999999988865532 22233 689999999999988877 9999887 34444
Q ss_pred HhhccCC----------------CccCCChHHHHHHHHHHHHHhhCch-HHHHHHHH
Q 016668 340 INNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQNKS 379 (385)
Q Consensus 340 i~~~~fp----------------~~qg~p~~~~iaala~Al~e~~~~~-~~~y~~~v 379 (385)
+.....+ ....+++...++++..+++.+.+++ +++..+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~ 270 (368)
T PRK13479 214 CKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARY 270 (368)
T ss_pred hhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 4322111 0011567778889999998776554 34433333
No 58
>PRK12414 putative aminotransferase; Provisional
Probab=99.79 E-value=3.1e-17 Score=164.51 Aligned_cols=237 Identities=16% Similarity=0.181 Sum_probs=156.7
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccC--CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Lias--en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
.++..+.+.++..+.+.. .+...++|-.+ +..+++.+.+++...+.... ..|+. ..|.+ ++++.++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~ia~~l~ 80 (384)
T PRK12414 9 SKLPDVGTTIFTVIGQLA-AQHDALNLSQGAPNFAPDPALVEGVARAMRDGH-NQYAP---MAGIA---ALREALAEKTE 80 (384)
T ss_pred HhcccCCccHHHHHHHHH-HhCCeEEcCCCCCCCCCCHHHHHHHHHHHHhCC-CCcCC---CCCcH---HHHHHHHHHHH
Confidence 445555566666554432 23344666543 33458888888876654321 23432 22443 77777888999
Q ss_pred HHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCC
Q 016668 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~i 238 (385)
+++|++.+...-.+.+.+|+.|+..++.++++|||+|++.+|.|.++.. .+...|..+. +++++++++.+
T Consensus 81 ~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~--~v~~~~~~~~~ 150 (384)
T PRK12414 81 RLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAP--------IVRLQGATPV--AIKLSPEDFRV 150 (384)
T ss_pred HHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHcCCEEE--EEecCcccccc
Confidence 9999863110012334445579999999999999999999987654311 2345566444 44455445689
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CC-Cc--E
Q 016668 239 DYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-CD--V 307 (385)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~~~--~---~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~g-aD--i 307 (385)
|++++++.++. ++|+|+++.++||+ . .++++|.++|+++|+++++|+++. .+.+.+....++ .. .| +
T Consensus 151 d~~~l~~~l~~-~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~i 228 (384)
T PRK12414 151 NWDEVAAAITP-RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYE-HVVFDGARHHSMARHRELAERSV 228 (384)
T ss_pred CHHHHHhhcCc-ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhh-hccCCCCCccCcccCcCccCcEE
Confidence 99999998864 78999888788773 2 358899999999999999999974 444443222122 11 22 7
Q ss_pred EEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 308 v~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
++.|++|+| +|.|.|++++++ ++.+.+...
T Consensus 229 ~~~SfSK~~~~pGlRiG~~v~~~------~l~~~l~~~ 260 (384)
T PRK12414 229 IVSSFGKSYHVTGWRVGYCLAPA------ELMDEIRKV 260 (384)
T ss_pred EEecccccccCccceEEEEecCH------HHHHHHHHH
Confidence 899999987 788999999987 566666543
No 59
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.79 E-value=1.7e-17 Score=164.53 Aligned_cols=266 Identities=18% Similarity=0.180 Sum_probs=167.1
Q ss_pred ChHHHHHHHHHHHHhh--hccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 016668 87 DPEVCEIITKEKERQF--KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 164 (385)
Q Consensus 87 dp~~~~~i~~e~~~~~--~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~ 164 (385)
+.++++.+.+..+.-. ..+ +-...+++.|.+.+++...+.... +.+. .+.+. .++++.+++++++++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~~~~~~--~~~~--~~~~~---~~~~~~~~~~la~~~g~~ 75 (371)
T PRK13520 4 EEEILEELEEYRSEDLKYERI-LSSMCTEPHPIARKAHEMFLETNL--GDPG--LFPGT---AKLEEEAVEMLGELLHLP 75 (371)
T ss_pred HHHHHHHHHHHHhcCCCHHHe-eeeeecCchHHHHHHHHHHHhcCC--CCcc--cCccH---HHHHHHHHHHHHHHhCCC
Confidence 3456666555433321 212 334467778998999887665422 3332 23332 245566888999999987
Q ss_pred CCCCcceeecCCcHHHHHHHHHHhcc----CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCH
Q 016668 165 ENKWGVNVQPLSGSPANFEVYTAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (385)
Q Consensus 165 ~~~~~~~V~~~sGs~A~~~a~~all~----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~ 240 (385)
.. ..+.+.+|+.||..++.++.+ +||+|++.++. |.++. +.+...|..+..++ .+ +++.+|+
T Consensus 76 ~~---~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~---h~s~~-----~~~~~~g~~~~~v~--~~-~~~~~d~ 141 (371)
T PRK13520 76 DA---YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESA---HFSFD-----KAADMLGVELRRAP--LD-DDYRVDV 141 (371)
T ss_pred CC---CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcc---hHHHH-----HHHHHcCceEEEec--CC-CCCcCCH
Confidence 63 235567788899988877643 68999998864 43321 13345676666555 33 3568999
Q ss_pred HHHHHHhhhcCCcEEEEcC--CCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCC--CCCcEEEECCCc
Q 016668 241 DMLEKTAILFRPKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF--KYCDVVTTTTHK 314 (385)
Q Consensus 241 d~le~~i~~~~pklIi~~~--s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~--~gaDiv~~S~hK 314 (385)
++|++.+++ ++++|++.. +.+|...|+++|.++|+++|+++++|++|+.+........ ..+ .++|.+++|+||
T Consensus 142 ~~l~~~i~~-~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K 220 (371)
T PRK13520 142 KAVEDLIDD-NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHK 220 (371)
T ss_pred HHHHHHHhh-CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCcc
Confidence 999999965 566555332 3467888999999999999999999999975532111111 112 278999999999
Q ss_pred cCccc-cEEEEEEeCCCCchhHHHHHHhhccCCCc--------cCCChHHHHHHHHHHHHHhhCchHHHHHHHHhc
Q 016668 315 SLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGL--------QGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSAC 381 (385)
Q Consensus 315 ~l~Gp-rgG~I~~~~~~~~~~~~~~~i~~~~fp~~--------qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~ 381 (385)
++.+| ++|+++..++ ++.+.+... .+.. .|++....++++..+++.+...+++++.++..+
T Consensus 221 ~~~a~~~~G~~~~~~~-----~~~~~l~~~-~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~ 290 (371)
T PRK13520 221 MGLAPIPAGGILFRDE-----SYLDALAVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCME 290 (371)
T ss_pred ccCccCCceEEEEcCH-----HHHHhhccc-CccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHH
Confidence 86443 4566665553 455555321 1211 233444557777778877666666666655544
No 60
>PRK14012 cysteine desulfurase; Provisional
Probab=99.78 E-value=1e-17 Score=168.96 Aligned_cols=233 Identities=18% Similarity=0.228 Sum_probs=153.4
Q ss_pred cCCCCCcHHHHHHHhhHhh--ccCCCCCCCCCCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLT--NKYSEGLPGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~--~~y~~g~p~~r~~-~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~ 185 (385)
++..++++.|++++...+. +.+ +.++.+.. .+....+.++ .+++++++++|+++++ .+.+.+||.|+..++
T Consensus 10 a~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~r~~ia~~~g~~~~~---v~~~~g~t~al~~~l 83 (404)
T PRK14012 10 SATTPVDPRVAEKMMPYLTMDGTF--GNPASRSHRFGWQAEEAVD-IARNQIADLIGADPRE---IVFTSGATESDNLAI 83 (404)
T ss_pred cCCCCCCHHHHHHHHHHHHhcccC--cCCCchhhHHHHHHHHHHH-HHHHHHHHHcCcCcCe---EEEeCCHHHHHHHHH
Confidence 5566889999999988775 444 33432111 1111112333 4677899999998742 345566778988888
Q ss_pred HHh----ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 186 TAI----LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 186 ~al----l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.++ +++||+|++.+++|.+.... +..+...|..+..++ ++ .++.+|+++|++.+++ ++++|++...+
T Consensus 84 ~~l~~~~~~~gd~Vi~~~~~~~s~~~~-----~~~~~~~g~~~~~v~--~~-~~g~~d~~~l~~~i~~-~t~lv~~~~~~ 154 (404)
T PRK14012 84 KGAAHFYQKKGKHIITSKTEHKAVLDT-----CRQLEREGFEVTYLD--PQ-SNGIIDLEKLEAAMRD-DTILVSIMHVN 154 (404)
T ss_pred HHHHHhhcCCCCEEEEecCccHHHHHH-----HHHHHhCCCEEEEEc--cC-CCCcCCHHHHHHhcCC-CCEEEEEECcC
Confidence 776 37999999988766443221 112223466555554 44 3678999999999965 78888776554
Q ss_pred --CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHH
Q 016668 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (385)
Q Consensus 262 --~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~ 336 (385)
+|...|+++|.++|+++|+++++|++|+.|.. +..+. ++|++++|+||. .||.| |+++.+++. .
T Consensus 155 n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~-----~~~~~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~~-----~ 223 (404)
T PRK14012 155 NEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKV-----PIDLSKLKVDLMSFSAHKI-YGPKGIGALYVRRKP-----R 223 (404)
T ss_pred CCccchhhHHHHHHHHHHcCCEEEEEcchhcCCc-----ccCcccCCCCEEEEehhhc-cCCCceEEEEEecCC-----C
Confidence 46778999999999999999999999977643 21222 689999999995 47766 777777642 1
Q ss_pred HHHHhhcc------CCCccCCChHHHHHHHHHHHHHhh
Q 016668 337 ESAINNAV------FPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 337 ~~~i~~~~------fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
.++.... .....|+++...+.++..|++.+.
T Consensus 224 -~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~ 260 (404)
T PRK14012 224 -VRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAK 260 (404)
T ss_pred -CCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHH
Confidence 1111100 001235677788888888876553
No 61
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.78 E-value=2.4e-17 Score=164.40 Aligned_cols=214 Identities=14% Similarity=0.087 Sum_probs=145.1
Q ss_pred hccccccCC--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCC-c
Q 016668 103 KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLS-G 177 (385)
Q Consensus 103 ~~l~Liase--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~s-G 177 (385)
.-++|-..+ ..+++.+++++...+.+.. .+|+. ..|.+ ++++..++++.+.+| ++.+ +|.+++ +
T Consensus 25 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~la~~~~~~~~~~~~~~----~i~~t~g~ 93 (382)
T PRK06108 25 GVLPLWFGESDLPTPDFIRDAAAAALADGE-TFYTH---NLGIP---ELREALARYVSRLHGVATPPE----RIAVTSSG 93 (382)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCCH---HHHHHHHHHHHHHhCCCcCcc----eEEEeCCh
Confidence 335555433 4558899999887765421 23433 23444 788888888988888 5443 344544 5
Q ss_pred HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEE
Q 016668 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA 257 (385)
Q Consensus 178 s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~ 257 (385)
+.|+..++.++++|||+|++.+|.|..+.. .+...|..+..++++.+.+++.+|++++++.++. ++|+|++
T Consensus 94 ~~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~i~l 164 (382)
T PRK06108 94 VQALMLAAQALVGPGDEVVAVTPLWPNLVA--------APKILGARVVCVPLDFGGGGWTLDLDRLLAAITP-RTRALFI 164 (382)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCccchHH--------HHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc-cceEEEE
Confidence 669999999999999999999987654321 3345676655555432223457999999998854 7888888
Q ss_pred cCCCCCC--CC---CHHHHHHHHHHcCcEEEEecccccccccc-C-cccCCCC----C-CcEEEECCCccC--ccccEEE
Q 016668 258 GASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-S-VVADPFK----Y-CDVVTTTTHKSL--RGPRGGM 323 (385)
Q Consensus 258 ~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~-g-~~~~p~~----g-aDiv~~S~hK~l--~GprgG~ 323 (385)
+.++||+ .. ++++|.++|+++|+++++|++|. ++... + ..++.++ + ..+++.|+||++ +|.|.|+
T Consensus 165 ~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~ 243 (382)
T PRK06108 165 NSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYE-RLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGW 243 (382)
T ss_pred ECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhh-hhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceee
Confidence 7777763 33 47889999999999999999974 44433 1 1222121 1 237899999986 6788999
Q ss_pred EEEeCCCCchhHHHHHHhhc
Q 016668 324 IFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~ 343 (385)
+++++ ++.+++...
T Consensus 244 ~~~~~------~~~~~~~~~ 257 (382)
T PRK06108 244 LVAPP------ALGQVLEKL 257 (382)
T ss_pred eeCCH------HHHHHHHHH
Confidence 99987 566666543
No 62
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.78 E-value=1.1e-17 Score=164.68 Aligned_cols=169 Identities=20% Similarity=0.196 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcc
Q 016668 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (385)
Q Consensus 144 ~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (385)
+...++|+ .+++++|.+. .+.++|||.|+..++.++ ++|||+|+++.+.|.+.. ..+...|.
T Consensus 18 ~~~~~~~~----~la~~~~~~~-----~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~--------~~~~~~g~ 80 (352)
T cd00616 18 PKVREFEK----AFAEYLGVKY-----AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATA--------NAILLLGA 80 (352)
T ss_pred HHHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH--------HHHHHcCC
Confidence 33445554 6889999754 466789999999999998 799999999987654321 13345565
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 302 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~ 302 (385)
.+ +.++++++++.+|++++++.+++ ++++|++.. .+|...|+++|.++|+++|+++++|++|+.|....+. ++
T Consensus 81 ~~--~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~---~~ 153 (352)
T cd00616 81 TP--VFVDIDPDTYNIDPELIEAAITP-RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGR---KV 153 (352)
T ss_pred eE--EEEecCCCcCCcCHHHHHHhcCc-CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCE---Ec
Confidence 44 44456644678999999998854 789888754 4677889999999999999999999999887654332 22
Q ss_pred C-CCcEEEECCC--ccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 303 K-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 303 ~-gaDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
. .+|+.++|+| |+++++.||+++++++ ++.+++.
T Consensus 154 ~~~~d~~~~S~~~~K~~~~~~gg~~~~~~~-----~~~~~~~ 190 (352)
T cd00616 154 GTFGDAGAFSFHPTKNLTTGEGGAVVTNDE-----ELAERAR 190 (352)
T ss_pred ccCcceeEEcCCCCCCCcccCceEEEECCH-----HHHHHHH
Confidence 2 4688888876 9998889999998865 5655554
No 63
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.78 E-value=6.2e-18 Score=165.45 Aligned_cols=202 Identities=18% Similarity=0.189 Sum_probs=132.9
Q ss_pred cCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHH
Q 016668 109 ASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (385)
Q Consensus 109 asen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~ 186 (385)
.+||+ +++.+++++...... . . + |+..+..+++ ++++++++| +. ..+.+.+|+.|+..++.
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~-~----~--~-~~~~~~~~~l----~~~~a~~~g-~~----~~~~~~~gt~a~~~~~~ 65 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVG-D----D--V-YGEDPTTAKL----EARAAELFG-KE----AALFVPSGTAANQLALA 65 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccC-C----c--c-cCCCHHHHHH----HHHHHHHhC-CC----eEEEecCchHHHHHHHH
Confidence 45555 488999998764321 1 1 1 2222333344 457889999 33 25677889999999999
Q ss_pred HhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh------cCCcEEEEcCC
Q 016668 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGAS 260 (385)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~------~~pklIi~~~s 260 (385)
++++|||+|++.++.|.++.... ......|..+..++ .+ ++.+|++++++++++ .++++|+++.+
T Consensus 66 ~l~~~gd~v~~~~~~~~~~~~~~-----~~~~~~g~~~~~v~--~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 66 AHTQPGGSVICHETAHIYTDEAG-----APEFLSGVKLLPVP--GE--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred HhcCCCCeEEEecCcceeeecCC-----cHHHHcCceEEeec--CC--CCcCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 99999999999888664432110 01223565444443 43 367999999999864 26788888766
Q ss_pred CCC-C---CCCHHHHHHHHHHcCcEEEEecccccccc-ccCcccCCC-CCCcEEEECCCccCccccEEEEEEeCCCCchh
Q 016668 261 AYP-R---DFDYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 261 ~~~-~---~~dl~~I~~ia~~~ga~livD~ah~~Gli-~~g~~~~p~-~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~ 334 (385)
+++ . ..|+++|+++|+++|+++++|++|..+.. ..+...... .++|+++.|+||++..|.|++++.++
T Consensus 137 ~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~------ 210 (338)
T cd06502 137 TEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNR------ 210 (338)
T ss_pred cCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCH------
Confidence 554 2 24578899999999999999999854422 122111112 26899999999999777666555555
Q ss_pred HHHHHHhh
Q 016668 335 ELESAINN 342 (385)
Q Consensus 335 ~~~~~i~~ 342 (385)
++.+++..
T Consensus 211 ~~~~~~~~ 218 (338)
T cd06502 211 DFIARARR 218 (338)
T ss_pred HHHHHHHH
Confidence 56666654
No 64
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.78 E-value=1.2e-17 Score=168.77 Aligned_cols=214 Identities=17% Similarity=0.207 Sum_probs=146.9
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccccccccc
Q 016668 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 140 ~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
|+|.+.+.+||+ .++++||.++ .|.++||+.|+..++...++|||.| +.. .|+... ...+..
T Consensus 74 Yagd~s~~~LE~----~vAe~lG~e~-----aV~v~sGTaAl~ll~~l~v~pGd~V--p~n---~~f~Tt----~ahI~~ 135 (460)
T PRK13237 74 YAGSRNFYHLEE----TVQEYYGFKH-----VVPTHQGRGAENLLSRIAIKPGQYV--PGN---MYFTTT----RYHQEL 135 (460)
T ss_pred hcCCCcHHHHHH----HHHHHHCCCe-----EEEeCCHHHHHHHHHHhCCCCcCEE--CCc---cchHhh----HHHHHh
Confidence 556666778886 5788999987 4778899999998766568999976 221 122110 011334
Q ss_pred CcceEEEEe-------ccccCCCCCCCHHHHHHHhhhcCC------cEEEEcCCCCCCC---CCHHHHHHHHHHcCcEEE
Q 016668 220 TSIYFESMP-------YRLDESTGLVDYDMLEKTAILFRP------KLIIAGASAYPRD---FDYPRMRQIADAVGALLM 283 (385)
Q Consensus 220 ~g~~~~~i~-------~~~~~~~~~iD~d~le~~i~~~~p------klIi~~~s~~~~~---~dl~~I~~ia~~~ga~li 283 (385)
.|..+.-+. -..++.++.+|+++|++.+++..+ ++++..+..-|.+ .++++|.++|+++|+.|+
T Consensus 136 ~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi 215 (460)
T PRK13237 136 NGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVF 215 (460)
T ss_pred CCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEE
Confidence 444221111 012345789999999999975322 2333322221333 378999999999999999
Q ss_pred Eecccccc---ccc---cCcccCC--------CCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhc--cCCC
Q 016668 284 MDMAHISG---LVA---ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA--VFPG 347 (385)
Q Consensus 284 vD~ah~~G---li~---~g~~~~p--------~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~--~fp~ 347 (385)
.|+||..| ++- .+....+ +.++|.+++|+||.+.++.||+|+++++ ++.++++.. .|+|
T Consensus 216 ~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~GG~i~t~D~-----eL~~~~r~~~~~~eG 290 (460)
T PRK13237 216 FDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIGGFLAMNDE-----ELFDEAKELVVVYEG 290 (460)
T ss_pred EECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCceEEEECCH-----HHHHHHHHhccccCC
Confidence 99999988 441 1111122 2379999999999999999999999997 899998877 6777
Q ss_pred cc--CCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 348 LQ--GGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 348 ~q--g~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
+. |+..-..+.|+|++|.|...++|.+|+
T Consensus 291 ~~tygg~~grd~~alAvgl~E~~~~~y~~~r 321 (460)
T PRK13237 291 MPSYGGMAGRDMEAMAIGIEESVQYEYIEHR 321 (460)
T ss_pred CcCCCChhhhHHHHHHhHHHhhchHHHHHHH
Confidence 54 445456899999999999887664443
No 65
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.78 E-value=2.1e-17 Score=167.96 Aligned_cols=202 Identities=19% Similarity=0.279 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEE
Q 016668 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (385)
Q Consensus 146 ~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (385)
..+||+ .++++||.++ .|.+.+|+.|+..++.++++|||.|+ +++.+.. +. ..+.+.|....
T Consensus 55 ~~~Lee----aia~~~g~~~-----vv~t~~Gt~Al~la~~al~~pGD~V~-~~~~f~~---~~-----~~i~~~Ga~pv 116 (431)
T cd00617 55 FYDLED----AVQDLFGFKH-----IIPTHQGRGAENILFSILLKPGRTVP-SNMHFDT---TR-----GHIEANGAVPV 116 (431)
T ss_pred HHHHHH----HHHHHHCCCe-----EEEcCCHHHHHHHHHHHhCCCCCEEc-cCCcccc---hH-----HHHHhCCCEeE
Confidence 446766 4778899876 36788899999999999999999884 4432222 11 13456676544
Q ss_pred EEeccccC---------CCCCCCHHHHHHHhhhc---CCcEEEEcCCCCC---CCC---CHHHHHHHHHHcCcEEEEecc
Q 016668 226 SMPYRLDE---------STGLVDYDMLEKTAILF---RPKLIIAGASAYP---RDF---DYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 226 ~i~~~~~~---------~~~~iD~d~le~~i~~~---~pklIi~~~s~~~---~~~---dl~~I~~ia~~~ga~livD~a 287 (385)
.++ +++ .++.+|+++|++.+++. ++++|+++.++|+ .+. ++++|.++|+++|++|+.|++
T Consensus 117 ~v~--i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaA 194 (431)
T cd00617 117 DLV--IDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAA 194 (431)
T ss_pred EEe--cccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEch
Confidence 444 432 24569999999999753 3678888776664 444 467889999999999999999
Q ss_pred cccccc-c-----cCcccCC--------CCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhcc--CCC--cc
Q 016668 288 HISGLV-A-----ASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV--FPG--LQ 349 (385)
Q Consensus 288 h~~Gli-~-----~g~~~~p--------~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~--fp~--~q 349 (385)
|..+-. + .|....+ +.++|.+++|+||.+.++-||+++++++ ++.+++.... +.+ ..
T Consensus 195 r~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~-----~l~~~~~~~~~~~~~~~~~ 269 (431)
T cd00617 195 RFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDD-----ELYEEARQRVVLYEGFVTY 269 (431)
T ss_pred hhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcH-----HHHHHHHHhccccCCcccc
Confidence 876411 1 1221222 2378999999999988889999999985 6878776543 222 24
Q ss_pred CCChHHHHHHHHHHHHHhhCchH
Q 016668 350 GGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 350 g~p~~~~iaala~Al~e~~~~~~ 372 (385)
|+.+...++|++++|.+....++
T Consensus 270 gG~~~r~~~A~A~gL~e~~~~~~ 292 (431)
T cd00617 270 GGMAGRDMEALAQGLREAVEEDY 292 (431)
T ss_pred ccccHHHHHHHHHHHHhcccHHH
Confidence 67778888999989988544333
No 66
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=4e-18 Score=171.33 Aligned_cols=175 Identities=26% Similarity=0.281 Sum_probs=131.4
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|.+.|+ |++..+.||+ +++++.|.+. .+.+.||+.|+..++.++++|||+|+++++.|++......
T Consensus 44 ~~~Y~R~--~npt~~~Le~----~lA~leg~e~-----ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~-- 110 (388)
T PRK08861 44 KYDYTRS--GNPNRGLLEQ----TLSELESGKG-----AVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFN-- 110 (388)
T ss_pred CccccCC--CCchHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHH--
Confidence 3445554 6777788876 5788999754 3667778889999999999999999999988765422100
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
......| +++..+ + ..|++++++.+++ ++|+|+++.++|| ...|+++|.++|+++|+++++|++|..
T Consensus 111 --~~~~~~g--i~v~~v--d----~~d~e~l~~~i~~-~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~ 179 (388)
T PRK08861 111 --TRANKGD--FKVQFV--D----QSDAAALDAALAK-KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLT 179 (388)
T ss_pred --HHHhcCC--eEEEEE--C----CCCHHHHHHhcCc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccc
Confidence 0111223 344443 2 2589999998865 7999999888776 678999999999999999999999976
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
++. ..|++ |+|++++|+||++.||. ||+++++++ ++.+++.
T Consensus 180 ~~~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~-----~~~~~~~ 224 (388)
T PRK08861 180 PVL-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTK-----EHAEELA 224 (388)
T ss_pred ccc-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHH-----HHHHHHH
Confidence 643 35677 89999999999999875 788888765 5666554
No 67
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.78 E-value=3.1e-17 Score=165.27 Aligned_cols=200 Identities=17% Similarity=0.156 Sum_probs=138.5
Q ss_pred cCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 109 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 109 asen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
+|++|. +|.++++....+ .+|.-|+.++|.+-| .....++|+ ++++++|.+. .+.++||+.|+..
T Consensus 4 ~s~dyLgl~~~~~~~~~~~~a~-~~~g~~~~~sr~~yg~~~~~~~LE~----~lA~~~g~e~-----al~~~sG~~a~~~ 73 (392)
T PLN03227 4 ATHDFLSTSSSPTLRQTALESL-SHYGCGSCGPRGFYGTIDAHLELEQ----CMAEFLGTES-----AILYSDGASTTSS 73 (392)
T ss_pred cCcCccCCCCCHHHHHHHHHHH-HHhCCCCcccccccCChHHHHHHHH----HHHHHhCCCc-----EEEecCcHHHHHH
Confidence 566665 788999988776 457677777665444 344556654 6899999986 4778999999999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHH---Hhhh----------c
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK---TAIL----------F 250 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~---~i~~----------~ 250 (385)
++.++++|||+|++.++.|++... .+.+.+. ++..++. .|++++++ .+.. .
T Consensus 74 ~i~~l~~~GD~Vl~~~~~h~s~~~--------~~~l~~~--~~~~~~~------~d~~~l~~~~~~i~~~~~a~~~~~~~ 137 (392)
T PLN03227 74 TVAAFAKRGDLLVVDRGVNEALLV--------GVSLSRA--NVRWFRH------NDMKDLRRVLEQVRAQDVALKRKPTD 137 (392)
T ss_pred HHHHhCCCCCEEEEeccccHHHHH--------HHHHcCC--eEEEeCC------CCHHHHHHHHHHhhhhccccccccCC
Confidence 999999999999999876654321 2233333 3333322 23444444 3321 1
Q ss_pred CCcEEEEcCCC--CCCCCCHHHHHHHHHHcCcEEEEecccccccccc---Ccc----cCCCCCCcEEEECCCccCccccE
Q 016668 251 RPKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV----ADPFKYCDVVTTTTHKSLRGPRG 321 (385)
Q Consensus 251 ~pklIi~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~---g~~----~~p~~gaDiv~~S~hK~l~Gprg 321 (385)
++++|+++++. .+...|+++|+++|+++|+++++|++|+.|.... +.. ..|..++|++++|++|.+ ||.|
T Consensus 138 ~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~~g 216 (392)
T PLN03227 138 QRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GSVG 216 (392)
T ss_pred CcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hccC
Confidence 46788887654 3567899999999999999999999998664421 111 123347899999999975 7999
Q ss_pred EEEEEeCCCCchhHHHHHHh
Q 016668 322 GMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~ 341 (385)
|++++++ ++.+.+.
T Consensus 217 g~v~~~~------~~~~~~~ 230 (392)
T PLN03227 217 GMTVGSE------EVVDHQR 230 (392)
T ss_pred cEEecCH------HHHHHHH
Confidence 9998887 4555544
No 68
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.78 E-value=4.3e-17 Score=163.48 Aligned_cols=238 Identities=18% Similarity=0.173 Sum_probs=155.8
Q ss_pred hhcccCChHHHHHHHHHHHHh----hhccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~----~~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~ 154 (385)
+++..+.+.++..+.+..... ..-++|-..++ .+++.+.+++...+......+|+. ..|.+ ++++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia 78 (388)
T PRK07366 5 QRLQPLQSNVFADMDRAKAQARAAGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLL---FHGTL---DFREAAA 78 (388)
T ss_pred hhhhcCCccHHHHHHHHHHHHHhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCC---CCCCH---HHHHHHH
Confidence 445555555555444433322 13345543333 458889999887664332223433 23544 6777778
Q ss_pred HHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
+++.+.+|.+.+ +.-+|.+++|+ +|+..++.++++|||+|++.+|.+.++.. .+...|..+..++ +++
T Consensus 79 ~~~~~~~g~~~~-~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~ 147 (388)
T PRK07366 79 QWYEQRFGLAVD-PETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHAG--------GVYLAGGQIYPMP--LRA 147 (388)
T ss_pred HHHHHhhCCcCC-CcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEEE--CCC
Confidence 888877775421 11147777776 59999999999999999999997765432 2345676554444 554
Q ss_pred C-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCc--ccCCCC--
Q 016668 234 S-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-- 303 (385)
Q Consensus 234 ~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~--~~~p~~-- 303 (385)
+ ...+|++++++.+.. ++|+|++++++||+ ..+ +++|.++|+++|++||+|+++ ..+.+.+. .++...
T Consensus 148 ~~~~~~d~~~l~~~~~~-~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~ 225 (388)
T PRK07366 148 ENDFLPVFADIPTEVLA-QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPY-VDLVFDGEVEPPSILQAD 225 (388)
T ss_pred ccCCCCCHHHHHHhhcc-cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecch-hhcccCCCCCCCChhhCC
Confidence 3 347899999877754 68999988888874 333 677888999999999999996 45554432 222222
Q ss_pred -CCc--EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 304 -YCD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 304 -gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
..+ +++.|++|++ +|.|.|++++++ ++.+++...
T Consensus 226 ~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~------~li~~l~~~ 264 (388)
T PRK07366 226 PEKSVSIEFFTLSKSYNMGGFRIGFAIGNA------QLIQALRQV 264 (388)
T ss_pred CCcccEEEEeecccccCCcchhheehcCCH------HHHHHHHHH
Confidence 123 5789999997 789999999877 576666544
No 69
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.78 E-value=1.1e-16 Score=160.17 Aligned_cols=207 Identities=17% Similarity=0.148 Sum_probs=142.2
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all 189 (385)
+..+++.+.+++.+.+.+....+|+. ..|.+ ++++.+++++.+.+|.+... .-+|.+++|+ +++..++.+++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~~~~~~~-~~~vi~t~G~~~~l~~~~~~~~ 112 (383)
T TIGR03540 40 DLPTPKHIVEALCKAAENPENHRYPS---YEGML---AYRQAVADWYKRRFGVELDP-ETEVLSLIGSKEGIAHIPLAFV 112 (383)
T ss_pred CCCCCHHHHHHHHHHHhCCCCCCCCC---CCCCH---HHHHHHHHHHHHhhCCCCCC-CCeEEECCCcHHHHHHHHHHhC
Confidence 33458889999887664332234543 33544 67777788888888875321 1146666665 69999999999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDF 266 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~ 266 (385)
+|||+|++.+|.+.++.. .....|..+..++ +++++ ..+|++++++.+.. ++|+|+++.++|| ...
T Consensus 113 ~~gd~vlv~~P~y~~~~~--------~~~~~G~~v~~v~--~~~~~g~~~d~~~l~~~~~~-~~~~v~i~~P~NPtG~~~ 181 (383)
T TIGR03540 113 NPGDIVLVPDPGYPVYRI--------GTLFAGGEPYEMP--LKEENGFLPDFDAIPEDIAK-KAKLMFINYPNNPTGAVA 181 (383)
T ss_pred CCCCEEEEeCCCCcchHH--------HHHhcCCEEEEEe--cCcccCCccCHHHHHhhccc-cceEEEEeCCCCCcCccC
Confidence 999999999997655421 2345676544444 55443 46899999988854 7999988877877 345
Q ss_pred C---HHHHHHHHHHcCcEEEEeccccccccccCc-ccC--CCCC---CcEEEECCCccC--ccccEEEEEEeCCCCchhH
Q 016668 267 D---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFKY---CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 267 d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~--p~~g---aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~ 335 (385)
+ +++|.++|+++|++||+|+++. .+.+.+. .++ .+++ -.+++.|++|+| +|.|.|++++++ +
T Consensus 182 ~~~~~~~i~~~a~~~~~~ii~De~y~-~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~------~ 254 (383)
T TIGR03540 182 PLKFFKELVEFAKEYNIIVCHDNAYS-EITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA------D 254 (383)
T ss_pred CHHHHHHHHHHHHHcCEEEEEecchh-hhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH------H
Confidence 5 6889999999999999999974 4444332 122 1222 226789999987 688899999876 5
Q ss_pred HHHHHhh
Q 016668 336 LESAINN 342 (385)
Q Consensus 336 ~~~~i~~ 342 (385)
+.+++..
T Consensus 255 l~~~~~~ 261 (383)
T TIGR03540 255 LIAGLGK 261 (383)
T ss_pred HHHHHHH
Confidence 6666654
No 70
>PRK07337 aminotransferase; Validated
Probab=99.78 E-value=5.1e-17 Score=162.91 Aligned_cols=237 Identities=15% Similarity=0.108 Sum_probs=152.8
Q ss_pred hhcccCChHHHHHHHHHHHHhh----hcccccc--CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQF----KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~----~~l~Lia--sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~ 154 (385)
+++....++.+..+.+...+.+ .-++|-. ++..+++.+.+++...+.+. ...|+. ..|.+ ++++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~---~~g~~---~lr~~ia 77 (388)
T PRK07337 5 ARVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRG-VTQYTS---ALGLA---PLREAIA 77 (388)
T ss_pred hHhHhcCchHHHHHHHHHHHHHhcCCCEEEeCCcCCCCCCCHHHHHHHHHHHhcC-CCCCCC---CCCCH---HHHHHHH
Confidence 4455555554444444333321 2244433 33345788899888766532 123433 12433 6777777
Q ss_pred HHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 155 KRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
+++.+.+|.+.. + .+|..++| +.|+..++.+++++||+|++.+|.|.++.. .+...|..+..++ ++.
T Consensus 78 ~~~~~~~~~~~~-~-~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~~ 145 (388)
T PRK07337 78 AWYARRFGLDVA-P-ERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRH--------FVAAAEGRPVLVP--SGP 145 (388)
T ss_pred HHHHHHhCCCCC-h-HhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEee--cCC
Confidence 788877786421 1 14555555 569999999999999999999997765421 2334565444444 553
Q ss_pred C-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc
Q 016668 234 S-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (385)
Q Consensus 234 ~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD 306 (385)
+ ++.+|++++++.+.+ ++++|+++.++||+ .. ++++|.++|+++|+++++|+++ .++...+...+.+. +.+
T Consensus 146 ~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~ 223 (388)
T PRK07337 146 AERFQLTAADVEAAWGE-RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIY-QGLSYDAAPVSALSLGDD 223 (388)
T ss_pred ccCCcCCHHHHHhhcCc-cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCcChhhccCC
Confidence 3 458999999998864 67888887777763 33 4788999999999999999996 45544332223333 334
Q ss_pred -EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhcc
Q 016668 307 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV 344 (385)
Q Consensus 307 -iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~ 344 (385)
+++.|++|++ +|.|.|++++++ ++.+++....
T Consensus 224 vi~~~S~SK~~~~~G~RiG~~~~~~------~l~~~l~~~~ 258 (388)
T PRK07337 224 VITINSFSKYFNMTGWRLGWLVVPE------ALVGTFEKLA 258 (388)
T ss_pred EEEEEechhhcCCchhheeeeecCH------HHHHHHHHHH
Confidence 4678999987 688999999987 5666665443
No 71
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.77 E-value=6.3e-18 Score=170.25 Aligned_cols=174 Identities=21% Similarity=0.232 Sum_probs=129.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|.+.|| |++..++||+ ++++++|.++ .+.+.||+.|+..++.++++|||+|++.++.|++.....
T Consensus 50 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~--- 115 (391)
T TIGR01328 50 GYIYSRL--GNPTVSNLEG----RIAFLEGTEA-----AVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALL--- 115 (391)
T ss_pred CCceeCC--CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHH---
Confidence 4545554 6677777776 5889999986 467889999999999999999999999988776543210
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
...+...|..+. .++++ |++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..
T Consensus 116 -~~~~~~~G~~~~--~vd~~------d~e~l~~~i~~-~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~ 185 (391)
T TIGR01328 116 -EHALTKFGIQVD--FINMA------IPEEVKAHIKD-NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFAT 185 (391)
T ss_pred -HHHHhcCCeEEE--EECCC------CHHHHHHhhcc-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCch
Confidence 012234555433 33232 78999998865 7899998877765 577999999999999999999999876
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
+.. ..+++ ++|++++|++|++.|+. ||++++++ ++.+++.
T Consensus 186 ~~~-----~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~------~li~~l~ 229 (391)
T TIGR01328 186 PML-----TNPVALGVDVVVHSATKYIGGHGDVVAGLICGKA------ELLQQIR 229 (391)
T ss_pred hcc-----CCchhcCCCEEEccccccccCCCCceEEEEEcCH------HHHHHHH
Confidence 543 24555 89999999999997653 68887776 5555554
No 72
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.77 E-value=3.5e-17 Score=163.44 Aligned_cols=201 Identities=16% Similarity=0.177 Sum_probs=138.5
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcH---HHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE---YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~---~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
..+...+.+++.. |..|+.++|...|+. +...+++ .++.+++++|++. + +.+.+|+.++..++.++
T Consensus 18 g~~~~~~~~a~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~-~~e~lA~~~g~~~----~-~i~~g~~~a~~~~~~~l 86 (370)
T TIGR02539 18 GVLTEAARKALVE-----FGDGYSVCDFCGGRLDQITKPPIHD-FLEDLAEFLGMDE----A-RVTHGAREGKFAVMHAL 86 (370)
T ss_pred CCCcHHHHHHHHH-----HhhccccccccccccccccchHHHH-HHHHHHHHhCCCc----e-EEECChHHHHHHHHHHh
Confidence 3446666666653 444666666544432 0112332 3445899999986 2 34677888999999999
Q ss_pred ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhh------cCCcEEEEcCCC
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAIL------FRPKLIIAGASA 261 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~------~~pklIi~~~s~ 261 (385)
++|||+|++..++|.+.. ..+...|..+..++ .+. .++.+|++++++.+++ .++++|+++.++
T Consensus 87 ~~~gd~Vl~~~~~h~s~~--------~~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~ 156 (370)
T TIGR02539 87 CKEGDWVVLDGLAHYTSY--------VAAERAGLNVKEVP--HTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVD 156 (370)
T ss_pred hCCCCEEEECCcccHHHH--------HHHHHcCCEEEEEe--cCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCC
Confidence 999999999877543221 13456677665555 432 2468999999998853 257888887655
Q ss_pred --CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCcc-ccEEEEEEeCCCCchhHHH
Q 016668 262 --YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVELE 337 (385)
Q Consensus 262 --~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~~~~~~~~ 337 (385)
++...|+++|.++|+++|+++++|++|+.|... ..... +.|+++.|+||++.+ .+.|++++++ ++.
T Consensus 157 ~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~----~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~------~~i 226 (370)
T TIGR02539 157 GEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP----VSAKEIGADFIVGSGHKSMAASGPCGVLGMSE------EWE 226 (370)
T ss_pred CCCccccCHHHHHHHHHHcCCeEEEECccccCCcC----CCHHHcCCCEEEeeCcccccCCCCEEEEEECH------HHH
Confidence 456789999999999999999999999876321 11112 689999999999853 3569999887 566
Q ss_pred HHHhhc
Q 016668 338 SAINNA 343 (385)
Q Consensus 338 ~~i~~~ 343 (385)
+.+...
T Consensus 227 ~~l~~~ 232 (370)
T TIGR02539 227 DIVLRK 232 (370)
T ss_pred hhhccc
Confidence 665543
No 73
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.77 E-value=1e-16 Score=161.18 Aligned_cols=205 Identities=15% Similarity=0.184 Sum_probs=138.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pG 192 (385)
+++.+.+++...+.+....+|+. ..|.+ ++++..++++.+.+|.+.+ ..-.|.+++| ++|+..++.++++||
T Consensus 49 ~p~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~~~~~~-~~~~i~vt~G~~~al~~~~~~~~~~g 121 (394)
T PRK05942 49 APQPVIEAAIAALADPQNHGYPP---FEGTA---SFRQAITDWYHRRYGVELD-PDSEALPLLGSKEGLTHLALAYVNPG 121 (394)
T ss_pred CCHHHHHHHHHHHhCCCCccCCC---CCCCH---HHHHHHHHHHHHHHCCCcC-CCCeEEEccChHHHHHHHHHHhCCCC
Confidence 46667777665554322234543 23544 6777778888887786421 1113555666 469999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC--
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD-- 267 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d-- 267 (385)
|+|++.+|.|.++.. .+...|..+. +++++.+ ++.+|++++++.+.. ++|+|+++.++|| ...+
T Consensus 122 d~Vlv~~P~y~~~~~--------~~~~~g~~~~--~v~~~~~~~~~~d~~~l~~~~~~-~~k~i~l~~P~NPtG~~~s~~ 190 (394)
T PRK05942 122 DVVLVPSPAYPAHFR--------GPLIAGAQIY--PIILKPENDWLIDLSSIPEEVAQ-QAKILYFNYPSNPTTATAPRE 190 (394)
T ss_pred CEEEEcCCCCcchHH--------HHHHcCCEEE--EeecCCccCCccCHHHHHHhccc-cceEEEEcCCCCCCCCcCCHH
Confidence 999999998765432 2235566444 4445533 347999999998864 7999998877776 3444
Q ss_pred -HHHHHHHHHHcCcEEEEeccccccccccCcccCC---CC---CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHH
Q 016668 268 -YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELES 338 (385)
Q Consensus 268 -l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p---~~---gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~ 338 (385)
+++|.++|+++|+++|+|+++. .+...+..+.+ +. ...+++.|++|.| +|.|.|++++++ ++.+
T Consensus 191 ~~~~i~~~a~~~~~~iI~De~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~------~l~~ 263 (394)
T PRK05942 191 FFEEIVAFARKYEIMLVHDLCYA-ELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR------HIIQ 263 (394)
T ss_pred HHHHHHHHHHHcCeEEEEeccch-hhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH------HHHH
Confidence 7889999999999999999974 34333321112 22 1236789999976 778899999877 5777
Q ss_pred HHhhc
Q 016668 339 AINNA 343 (385)
Q Consensus 339 ~i~~~ 343 (385)
.+...
T Consensus 264 ~l~~~ 268 (394)
T PRK05942 264 GLRTL 268 (394)
T ss_pred HHHHH
Confidence 66543
No 74
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.77 E-value=4.6e-17 Score=161.98 Aligned_cols=233 Identities=20% Similarity=0.221 Sum_probs=150.6
Q ss_pred cccccCCC---CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 105 LELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 105 l~Liasen---~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
|++..+++ .++|.|++++...+. +|..+++..+...|.. .+....++++++++|.+. .+.+++|+.++
T Consensus 42 id~~~~~~~g~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~---~~~~~l~~~la~~~~~~~-----~i~~~~g~~~~ 112 (385)
T PRK05958 42 LNFASNDYLGLARHPRLIAAAQQAAR-RYGAGSGGSRLVTGNS---PAHEALEEELAEWFGAER-----ALLFSSGYAAN 112 (385)
T ss_pred EEeeCCCcccCCCCHHHHHHHHHHHH-hcCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHHHHH
Confidence 45544443 257899999988775 3443344333333332 233345567888998543 46778899988
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA 259 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~ 259 (385)
..++.++++|||+|++.++.|+++.. .+...|..+..++ ..|++.+++.++.. ++++++++.
T Consensus 113 ~~~l~~~~~~gd~V~~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~i~~~~~~~~lvi~~~ 176 (385)
T PRK05958 113 LAVLTALAGKGDLIVSDKLNHASLID--------GARLSRARVRRYP--------HNDVDALEALLAKWRAGRALIVTES 176 (385)
T ss_pred HHHHHHhCCCCCEEEEeCccCHHHHH--------HHHhcCCceEEeC--------CCCHHHHHHHHHhccCCCeEEEEEe
Confidence 88888889999999999887655431 2334555443332 24889999988653 245666665
Q ss_pred CCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccc-cCc-ccC--CCC-CCc-EEEECCCccCccccEEEEEEeCCCC
Q 016668 260 SAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VAD--PFK-YCD-VVTTTTHKSLRGPRGGMIFFKKDPV 331 (385)
Q Consensus 260 s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~-~~~--p~~-gaD-iv~~S~hK~l~GprgG~I~~~~~~~ 331 (385)
..+ |...++++|.++|+++|+++|+|++|..|... .+. ... .++ ..| +++.|+||+| |+.||+++.++
T Consensus 177 ~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~-~~~Gg~~~~~~--- 252 (385)
T PRK05958 177 VFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKAL-GSSGAAVLGSE--- 252 (385)
T ss_pred cccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhc-ccCCcEEEcCH---
Confidence 443 45678999999999999999999999766542 121 111 122 334 7899999998 56788888876
Q ss_pred chhHHHHHHhhccCCCc-cCCChHHHHHHHHHHHHHhhC
Q 016668 332 LGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 332 ~~~~~~~~i~~~~fp~~-qg~p~~~~iaala~Al~e~~~ 369 (385)
++.+.+.....+.. .+++++..+++...+++.+..
T Consensus 253 ---~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~ 288 (385)
T PRK05958 253 ---TLIDYLINRARPFIFTTALPPAQAAAARAALRILRR 288 (385)
T ss_pred ---HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc
Confidence 56666644332222 234556666666677765543
No 75
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=6.2e-18 Score=169.95 Aligned_cols=167 Identities=19% Similarity=0.198 Sum_probs=125.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++.++++|+ .+++++|.+. .+.++||+.|+..++.++++|||+|+++++.|++..... ..+...|
T Consensus 51 ~np~~~~lE~----~lA~l~g~~~-----~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~-----~~~~~~g 116 (385)
T PRK08574 51 ENPTLRPLEE----ALAKLEGGVD-----ALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLL-----KSLEKFG 116 (385)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH-----HHhhccC
Confidence 6677777776 5889999875 366789999999999999999999999998776543210 1112334
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+. . + .+|++++++.+++.++|+|+++.+++| ...|+++|+++|+++|+++++|++|+.|+..
T Consensus 117 ~~v~--~--~-----~~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~----- 182 (385)
T PRK08574 117 VKVV--L--A-----YPSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLY----- 182 (385)
T ss_pred cEEE--E--E-----CCCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccC-----
Confidence 3322 2 1 247899999886547899999887776 4689999999999999999999999777542
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
.+++ ++|++++|+||++.||. ||+++++++ ++.+++.
T Consensus 183 ~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~-----~~~~~~~ 223 (385)
T PRK08574 183 RPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSG-----EFLEELW 223 (385)
T ss_pred ChhhhCCcEEEeeCceeecCCCCceeEEEEECcH-----HHHHHHH
Confidence 3455 89999999999998873 786777654 5666554
No 76
>PRK09082 methionine aminotransferase; Validated
Probab=99.77 E-value=3.7e-17 Score=163.96 Aligned_cols=238 Identities=13% Similarity=0.145 Sum_probs=160.0
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhhcccccc--CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQFKSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~~~l~Lia--sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~ 156 (385)
+++++..+.+.++..+...... ..-++|-. ++..+++.+++++...+.... .+|+. ..|.+ ++++..+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~~a~~ 79 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALAAE-HGAINLSQGFPDFDGPPYLVEALAYAMAAGH-NQYPP---MTGVA---ALREAIAAK 79 (386)
T ss_pred hhhHhhccCccHHHHHHHHHhh-CCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-CCCCC---CCCcH---HHHHHHHHH
Confidence 4556666677777665543322 23355543 333457889998887664322 23433 23444 677778888
Q ss_pred HHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC
Q 016668 157 ALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~ 235 (385)
+.+++|.+.+ ...+|.+++| +.|+..++.++++|||+|++.+|.|.++.. .+...|..+. ++++++++
T Consensus 80 l~~~~~~~~~-~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~~~~--~~~~~~~~ 148 (386)
T PRK09082 80 TARLYGRQYD-ADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAP--------AIELAGGRAV--RVALQPPD 148 (386)
T ss_pred HHHHhCCCCC-CCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhHH--------HHHHcCCEEE--EEecCccc
Confidence 9999998642 1113555555 579999999999999999999987655321 3345666444 44455456
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C---CCHHHHHHHHHHcCcEEEEeccccccccccCc-ccCCC--CC---
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYPR--D---FDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--KY--- 304 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~~--~---~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~--~g--- 304 (385)
+.+|++++++.++. ++|+|+++.++||+ . .++++|.++|+++|+++|+|++| ..+.+.+. .++.. .+
T Consensus 149 ~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y-~~~~~~~~~~~s~~~~~~~~~ 226 (386)
T PRK09082 149 FRVDWQRFAAAISP-RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVY-EHIVFDGAGHASVLRHPELRE 226 (386)
T ss_pred ccCCHHHHHHhcCc-cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhh-hhhccCCCCCCChhhCcCccC
Confidence 78999999999865 78999887777763 2 46889999999999999999997 44554332 22222 12
Q ss_pred CcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
-.+++.|++|++ +|.|.|++++++ ++.+.+...
T Consensus 227 ~~i~~~S~SK~~~~~G~RiG~iv~~~------~l~~~~~~~ 261 (386)
T PRK09082 227 RAFVVSSFGKTYHVTGWKVGYCVAPA------ALSAEFRKV 261 (386)
T ss_pred cEEEEeechhhccchhhhhhhhhCCH------HHHHHHHHH
Confidence 237889999997 688999999986 566655443
No 77
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=1.4e-17 Score=167.50 Aligned_cols=169 Identities=25% Similarity=0.289 Sum_probs=126.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++...+||+ ++++++|.+.. +.+.||+.|+..++.++++|||+|+++++.|++..... . ......|
T Consensus 59 ~~p~~~~Le~----~lA~~~g~~~~-----i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~--~--~~~~~~g 125 (388)
T PRK07811 59 GNPTRTALEE----QLAALEGGAYG-----RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLI--D--KVFTRWG 125 (388)
T ss_pred CCccHHHHHH----HHHHHhCCCce-----EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHH--H--HhCcCCC
Confidence 4455566665 68889999873 56789999999999999999999999998876542110 0 0112234
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
. ++..++ ..|++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|++|++|++++.+.. .
T Consensus 126 i--~~~~~d------~~d~e~l~~~i~~-~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~-----~ 191 (388)
T PRK07811 126 V--EYTPVD------LSDLDAVRAAITP-RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYL-----Q 191 (388)
T ss_pred e--EEEEeC------CCCHHHHHHhcCc-CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCcccc-----C
Confidence 3 333322 2589999999865 7999999887776 578999999999999999999999866532 2
Q ss_pred CCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.|+. ++|++++|++|++.|| +||+++++++ ++.+++..
T Consensus 192 ~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~-----~l~~~~~~ 233 (388)
T PRK07811 192 QPLALGADVVVHSTTKYIGGHSDVVGGALVTNDE-----ELDEAFAF 233 (388)
T ss_pred CchhhCCcEEEecCceeecCCCCcEEEEEEECCH-----HHHHHHHH
Confidence 4555 8999999999999887 4798888765 56665543
No 78
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.76 E-value=1.6e-17 Score=166.61 Aligned_cols=168 Identities=22% Similarity=0.262 Sum_probs=124.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
|++..++||+ ++++++|.+. .+.++||+.|+..++. +++|||+|++.++.|++..... ...+...|
T Consensus 45 ~~p~~~~le~----~la~l~g~~~-----~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~----~~~~~~~G 110 (378)
T TIGR01329 45 GNPTRTALES----LLAKLDKADR-----AFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLL----TQVVPRSG 110 (378)
T ss_pred CChHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHH----HHHHHHcC
Confidence 6676666665 6888999865 4678899988887665 8899999999988776542110 00123456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+..++ . .|++++++.+++ ++|+|+++.++++ ...|+++|+++|+++|+++++|++|..++. .
T Consensus 111 ~~v~~vd--~------~d~~~le~~i~~-~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~-----~ 176 (378)
T TIGR01329 111 VVVVHVD--T------TDLDKVKAALGP-KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLL-----C 176 (378)
T ss_pred cEEEEeC--C------CCHHHHHHhcCc-CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 5444332 2 388999999864 7899998877765 577999999999999999999999866542 3
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.|++ ++|++++|+||++.||. +|+++++++ ++.+++..
T Consensus 177 ~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~-----~~~~~~~~ 218 (378)
T TIGR01329 177 NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGE-----EIAKKVYF 218 (378)
T ss_pred ChhhcCCcEEEEecceeccCCccceeEEEEeCcH-----HHHHHHHH
Confidence 4556 89999999999998864 788888765 55565543
No 79
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.76 E-value=2.1e-16 Score=158.74 Aligned_cols=239 Identities=15% Similarity=0.089 Sum_probs=157.7
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhcccccc--CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Lia--sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
++++....+.++..+.+...+....++|-. +...+++.+.+++...+.+....+|+. ..|.+ ++++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~lr~~~~~~l 78 (389)
T PRK05957 5 TSRMDAVQSPIIPVVGQLIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQA---VQGIP---PLLEAITQKL 78 (389)
T ss_pred hHHHHhcCCcHHHHHHHHHHhCCCeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCCH---HHHHHHHHHH
Confidence 455555566666554443333223355543 334578899999887664332223433 23444 5667778889
Q ss_pred HHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 158 LAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 158 a~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
++.+|.+.+.. .+|.+++|+ .++..++.++++|||+|++.+|.+..|.. .+...|..+..++ .+ +++
T Consensus 79 ~~~~g~~~~~~-~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~~ 146 (389)
T PRK05957 79 QQDNGIELNNE-QAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEM--------AITMAGCQPILVP--TD-DNY 146 (389)
T ss_pred HHHhCCCCCCC-CeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHHH--------HHHhcCCEEEEee--cC-CCC
Confidence 99999752101 245666665 58888888999999999999987655422 2345566544444 44 356
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCc-ccCCC---C-C-C
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF---K-Y-C 305 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~---~-g-a 305 (385)
.+|++++++.++. ++|+|++..++|| ...+ +++|.++|+++|+++++|+++ ..+.+.+. ..++. + . -
T Consensus 147 ~~d~~~l~~~i~~-~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~ 224 (389)
T PRK05957 147 QLQPEAIEQAITP-KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAY-EYFTYDGVKHFSPGSIPGSGNH 224 (389)
T ss_pred CcCHHHHHHhcCc-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccc-hhccCCCCCccChhhCCCccCc
Confidence 7999999998864 7899988877776 3455 889999999999999999997 45544321 11111 2 2 1
Q ss_pred cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhcc
Q 016668 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV 344 (385)
Q Consensus 306 Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~ 344 (385)
-|++.|++|.+ +|.|.|++++++ ++.+++....
T Consensus 225 ~i~~~S~SK~~g~~GlRiG~~~~~~------~~~~~~~~~~ 259 (389)
T PRK05957 225 TISLYSLSKAYGFASWRIGYMVIPI------HLLEAIKKIQ 259 (389)
T ss_pred EEEEecchhhccCccceeEEEecCH------HHHHHHHHHH
Confidence 26789999997 678899999876 5777766543
No 80
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.76 E-value=7.7e-17 Score=161.62 Aligned_cols=163 Identities=18% Similarity=0.171 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccC--CCEEeecCCCCCccccCCccccccccccCc---
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS--- 221 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~p--GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g--- 221 (385)
++.+.+++++++++|++.++ +.+ +.+|+ .++.++..+++++ ||+|+++++.|+++.. .+...+
T Consensus 64 ~~~~~~~~~la~~~g~~~~~--v~~-~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~--------~~~~~~~~~ 132 (398)
T cd00613 64 QALFELQTMLCELTGMDVAN--ASL-QDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPA--------VARTRGEPL 132 (398)
T ss_pred HHHHHHHHHHHHHHCCCccc--eec-cCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHH--------HHHHhcccC
Confidence 67777888999999997532 333 44455 4556666666776 9999999987766532 122233
Q ss_pred -ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCH-HHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 222 -IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDY-PRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 222 -~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl-~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
..+..++ ++ +++.+|++++++.+.+ ++++|+++.++ ++...|+ ++|+++|+++|+++++|++|..|....
T Consensus 133 g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~--- 205 (398)
T cd00613 133 GIEVVEVP--SD-EGGTVDLEALKEEVSE-EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLK--- 205 (398)
T ss_pred CcEEEEec--cC-CCCCcCHHHHHHhcCC-CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEeccccccCCC---
Confidence 5444444 43 2457999999998865 68888776554 3555675 999999999999999999986553211
Q ss_pred cCCCC-CCcEEEECCCccC-----ccccEEEEEEeCC
Q 016668 299 ADPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKD 329 (385)
Q Consensus 299 ~~p~~-gaDiv~~S~hK~l-----~GprgG~I~~~~~ 329 (385)
.+-. ++|++++|+||++ .||++|+++.+++
T Consensus 206 -~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~ 241 (398)
T cd00613 206 -PPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKE 241 (398)
T ss_pred -ChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhh
Confidence 1112 7899999999997 2578889988774
No 81
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.76 E-value=7.9e-17 Score=160.84 Aligned_cols=224 Identities=22% Similarity=0.229 Sum_probs=149.3
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.+++.+.+++...+. ++...+...++..|.. .+.+.+++++++++|.+. .+.+++|++++..++.++++||
T Consensus 47 ~~~~~~~~a~~~~~~-~~~~~~~~~~~~~g~~---~l~~~l~~~l~~~~g~~~-----~i~~~sG~~a~~~a~~~~~~~g 117 (385)
T TIGR01825 47 ADHPRLKEAAAQAIQ-QYGVGAGAVRTIAGTL---RLHEELEEKLAKFKKTEA-----ALVFQSGFNTNQGVLSALLRKG 117 (385)
T ss_pred CCCHHHHHHHHHHHH-HcCCCCCccCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECcHHHHHHHHHHHhCCCC
Confidence 378888888876654 3332233323344543 556667778999999754 4778899999999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc---CCcEEEEcCCCC--CCCCC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIAGASAY--PRDFD 267 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~---~pklIi~~~s~~--~~~~d 267 (385)
|.|++.++.|+++.. .+...|..+. .+ ..+|++++++.+++. ++++|+++...+ |...|
T Consensus 118 d~vi~~~~~~~~~~~--------~~~~~g~~~~--~~------~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~ 181 (385)
T TIGR01825 118 DIVLSDELNHASIID--------GLRLTKATKK--IY------KHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP 181 (385)
T ss_pred CEEEEEccccHHHHH--------HHHhcCCceE--Ee------CCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC
Confidence 999988876654321 2233444322 21 147889998877542 567888775443 45779
Q ss_pred HHHHHHHHHHcCcEEEEeccccccccc-cCc--c-cCCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 268 YPRMRQIADAVGALLMMDMAHISGLVA-ASV--V-ADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 268 l~~I~~ia~~~ga~livD~ah~~Gli~-~g~--~-~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+++|.++|+++|+++++|++|..|... .+. . ...++ +.|+++.|+||+| |..||++++++ ++.+.+..
T Consensus 182 ~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~gG~~~~~~------~~~~~~~~ 254 (385)
T TIGR01825 182 LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAI-GVVGGYAAGHK------ELIEYLKN 254 (385)
T ss_pred HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHh-hcCCCEEecCH------HHHHHHHH
Confidence 999999999999999999999666432 111 0 01222 5678999999998 56789888776 56666654
Q ss_pred ccCCCccC-CChHHHHHHHHHHHHHhh
Q 016668 343 AVFPGLQG-GPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 343 ~~fp~~qg-~p~~~~iaala~Al~e~~ 368 (385)
...+...+ .+++...+++..+++.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~a~~~al~~~~ 281 (385)
T TIGR01825 255 RARPFLFSTAQPPAVVAALAAAVDELQ 281 (385)
T ss_pred hCccccccCCCCHHHHHHHHHHHHHHh
Confidence 43223333 244555667777776543
No 82
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=3.2e-17 Score=165.76 Aligned_cols=169 Identities=24% Similarity=0.273 Sum_probs=126.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..++||+ ++++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|++.... + . ......|
T Consensus 58 ~~p~~~~Le~----~lA~l~g~~~-----~v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~-~-~--~~~~~~g 124 (405)
T PRK08776 58 GNPTRDLLGE----ALAELEGGAG-----GVITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRL-F-N--ALAKKGH 124 (405)
T ss_pred CChHHHHHHH----HHHHHhCCCc-----eEEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHH-H-H--HHHHhcC
Confidence 5666666665 6788999865 47788999999999999999999999998877653210 0 0 0112234
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
. ++..++ ..|++++++.+++ ++|+|+++.++|| ...|+++|.++|+++|+++++|++|..+. ..
T Consensus 125 ~--~v~~v~------~~d~~~l~~~i~~-~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~-----~~ 190 (405)
T PRK08776 125 F--ALITAD------LTDPRSLADALAQ-SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPA-----LQ 190 (405)
T ss_pred c--EEEEEC------CCCHHHHHHhcCc-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccc-----cC
Confidence 3 333322 2488999998864 7899998888776 57899999999999999999999986543 23
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.|++ ++|++++|+||++.|+. ||+++++++ ++.+++..
T Consensus 191 ~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~-----~l~~~l~~ 232 (405)
T PRK08776 191 KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDA-----ELHQQLVW 232 (405)
T ss_pred CcccccCCEEEecCceeecCCCCceEEEEEeCCH-----HHHHHHHH
Confidence 5666 89999999999998874 688888665 66666643
No 83
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.76 E-value=2.2e-17 Score=166.24 Aligned_cols=189 Identities=24% Similarity=0.291 Sum_probs=132.4
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all 189 (385)
+..+..+.+.++....... ..+|.++|+ +++..+++|+ ++++++|.+. .+.++||+.|+..++.+++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~--~~~~~y~r~--~~p~~~~le~----~la~l~g~~~-----~v~~ssG~~Ai~~al~al~ 97 (390)
T PRK08133 31 TSSFVFESAAEAAARFAGE--EPGNIYSRF--TNPTVTMFQE----RLAALEGAEA-----CVATASGMAAILAVVMALL 97 (390)
T ss_pred CCCcccCCHHHHHHhhcCC--cCCceeECC--CChHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHh
Confidence 3344445555544332211 124555554 4666666665 6889999876 3667899999999999999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
+|||+|++.++.|++.... + ...+...|..+. .+++ .|++++++.+++ ++|+|+++.+++| ...|
T Consensus 98 ~~Gd~Vi~~~~~y~~t~~~-~---~~~~~~~G~~v~--~vd~------~d~~~l~~~i~~-~tklV~ie~p~NptG~v~d 164 (390)
T PRK08133 98 QAGDHVVSSRSLFGSTVSL-F---EKIFARFGIETT--FVDL------TDLDAWRAAVRP-NTKLFFLETPSNPLTELAD 164 (390)
T ss_pred CCCCEEEEccCcchhHHHH-H---HHHHHHcCcEEE--EECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCCcCC
Confidence 9999999998877654321 0 011234565443 4333 278999998865 7899998877665 5789
Q ss_pred HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCccc---cEEEEEEeCC
Q 016668 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (385)
Q Consensus 268 l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~ 329 (385)
+++|.++|+++|+++++|+++..+.. ..|++ ++|++++|+||++.|+ -||+|+++++
T Consensus 165 l~~I~~la~~~gi~livD~t~~~~~~-----~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~ 225 (390)
T PRK08133 165 IAALAEIAHAAGALLVVDNCFCTPAL-----QQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKE 225 (390)
T ss_pred HHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEEeecceeecCCcceEeEEEEcCHH
Confidence 99999999999999999999865432 24555 8999999999998664 3588887763
No 84
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.76 E-value=1.7e-17 Score=166.85 Aligned_cols=161 Identities=20% Similarity=0.202 Sum_probs=120.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..++||+ .+++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|++..... . ......|
T Consensus 59 ~~pt~~~Le~----~lA~l~G~~~-----al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~--~--~~~~~~g 125 (386)
T PRK06767 59 GNPTVKLFEE----RMAVLEGGEE-----ALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFL--E--VLEEKFM 125 (386)
T ss_pred CCcchHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHH--H--HHHhhcC
Confidence 5666677776 5889999865 477889999999999999999999999988776543210 0 0011123
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
. +... + ...|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..+.. .
T Consensus 126 i--~~~~--~----~~~d~~~l~~~i~~-~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~-----~ 191 (386)
T PRK06767 126 I--THSF--C----DMETEADIENKIRP-NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL-----Q 191 (386)
T ss_pred e--EEEE--e----CCCCHHHHHHhhCc-CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2 2211 1 13488999998865 7899999888776 568999999999999999999999865432 2
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCC
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~ 329 (385)
.|+. ++|++++|++|++.|+. ||+++++++
T Consensus 192 ~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~ 225 (386)
T PRK06767 192 RPLELGCDAVVHSATKYIGGHGDVVAGVTICKTR 225 (386)
T ss_pred CchhcCCcEEEecCcceecCCCCceeEEEEeChH
Confidence 4455 89999999999997764 799998874
No 85
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.76 E-value=6.4e-17 Score=165.27 Aligned_cols=227 Identities=15% Similarity=0.146 Sum_probs=144.4
Q ss_pred CCCcHHHHHHHhhHhhccCCC-CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc
Q 016668 112 NFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK 190 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~-g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~ 190 (385)
.+.++.|++++...+.+ |.. .|.-.....| ...+. +++.+++++|+++. +.+.||+.|+..++ ..+.
T Consensus 91 s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g-~r~~~----le~~lA~l~gae~a-----lvv~sg~aAi~l~l-~~l~ 158 (454)
T TIGR00474 91 APLAEEAIEAVTDAARG-YSNLEYDLETGKRG-SRYSH----VEGLLCELTGAEDA-----LVVNNNAAAVLLAL-NTLA 158 (454)
T ss_pred CCCCHHHHHHHHHHHhc-ccchhccccccccc-hHHHH----HHHHHHHHhCCCcE-----EEECCHHHHHHHHH-HHhC
Confidence 45699999999877653 321 1110000112 22233 45578999999873 45788999998887 4579
Q ss_pred CCCEEeecCCCC---CccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC----
Q 016668 191 PHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP---- 263 (385)
Q Consensus 191 pGD~Vl~~~~~~---ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~---- 263 (385)
+||+|++.+.+| ||..... ..+...|..+. .++.+ ...|++++++.+++ ++++|++..++++
T Consensus 159 ~GdeVIvs~~e~v~~ggs~~i~-----~~~~~~G~~~~--~v~~~---~~~~l~dle~aI~~-~T~lv~~~h~sN~~~~G 227 (454)
T TIGR00474 159 KGKEVIVSRGELVEIGGSFRIP-----DVMEQSGAKLV--EVGTT---NRTHLKDYEDAITE-NTALLLKVHTSNYRIVG 227 (454)
T ss_pred CcCEEEECCChhhhhcchhhHH-----HHHHHcCCEEE--EeCCC---CCCCHHHHHHhcCc-CCEEEEEEccCcccccC
Confidence 999999988653 3322211 12345666444 33332 34689999999865 6888766544332
Q ss_pred --CCCCHHHHHHHHHHcCcEEEEecccccccccc----C--c---ccCCCC-CCcEEEECCCccCccccEEEEEEeCCCC
Q 016668 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----S--V---VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (385)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~----g--~---~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~ 331 (385)
...|+++|+++|+++|+++++|.+ +|.... + . ...+++ |+|++++|+||+|.||++|++++++
T Consensus 228 ~~~~~dl~~I~~la~~~g~~vivD~~--sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~~G~i~g~~--- 302 (454)
T TIGR00474 228 FTEEVSIAELVALGREHGLPVMEDLG--SGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQAGIIVGKK--- 302 (454)
T ss_pred CCCCCCHHHHHHHHHHcCCeEEEECC--CcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCeEEEEEECH---
Confidence 367999999999999999999975 444311 1 1 113344 8999999999999999999999987
Q ss_pred chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCc
Q 016668 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 332 ~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
++.+++....+.-.. ...-.+++++..++.....+
T Consensus 303 ---~~i~~l~~~~l~r~l-r~~k~~la~l~~~l~~~~~~ 337 (454)
T TIGR00474 303 ---ELIERLKKNPLTRAL-RVDKLTLAALEATLRLYLDP 337 (454)
T ss_pred ---HHHHhhhhchhHHHH-hhChHHHHHHHHHHHHHhCc
Confidence 455555432211000 12334566666677666554
No 86
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.76 E-value=2.3e-17 Score=164.83 Aligned_cols=169 Identities=23% Similarity=0.270 Sum_probs=127.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++.... .. ......|
T Consensus 38 ~~p~~~~le~----~la~l~g~~~-----a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~--~~--~~~~~~g 104 (369)
T cd00614 38 GNPTVDALEK----KLAALEGGEA-----ALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRL--FE--RLLPKLG 104 (369)
T ss_pred CChhHHHHHH----HHHHHHCCCC-----EEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHH--HH--HHHhhcC
Confidence 6777777776 5788999875 36778999999999999999999999998877553210 00 0122445
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+ ..++. -|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..++. .
T Consensus 105 ~~~--~~v~~------~d~~~l~~~i~~-~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~-----~ 170 (369)
T cd00614 105 IEV--TFVDP------DDPEALEAAIKP-ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-----Q 170 (369)
T ss_pred eEE--EEeCC------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhc-----C
Confidence 433 33322 268999998865 7899998877665 577999999999999999999999876543 3
Q ss_pred CCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.+++ ++|++++|++|++.|+ +||+++++++ ++.+++..
T Consensus 171 ~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~-----~l~~~l~~ 212 (369)
T cd00614 171 RPLELGADIVVHSATKYIGGHSDVIAGVVVGSGE-----ALIQRLRF 212 (369)
T ss_pred ChhhhCCcEEEeccceeccCCCCceEEEEEeCcH-----HHHHHHHH
Confidence 4566 8999999999999774 4899999874 45565543
No 87
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.76 E-value=2e-16 Score=158.44 Aligned_cols=237 Identities=17% Similarity=0.128 Sum_probs=152.2
Q ss_pred hhcccCChHHHHHHHHHHHHh---h-hccccccCC--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQ---F-KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~---~-~~l~Liase--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~ 154 (385)
+++....++.+..+.+...+. . ..++|-.++ ..+++.+.+++...+.......|+. ..|.+ ++++.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia 79 (385)
T PRK09276 6 DRIKNLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPS---YEGML---EFRKAVA 79 (385)
T ss_pred hHhhhCCccHHHHHHHHHHHHHhcCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCcH---HHHHHHH
Confidence 445555665554443333222 1 234444333 3457888998887664322223443 23433 6777777
Q ss_pred HHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
+++.+.+|.+.+ ..-+|.+++|+ +|+..++.++++|||+|++++|.+..+.. .....|..+..++ ++.
T Consensus 80 ~~~~~~~g~~~~-~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~~--------~~~~~g~~~~~v~--~~~ 148 (385)
T PRK09276 80 DWYKRRFGVELD-PETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYKI--------GTIFAGGEPYFMP--LKE 148 (385)
T ss_pred HHHHHHhCCCCC-CCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChHH--------HHHHcCCEEEEEe--cCC
Confidence 888877786421 11136666665 69999999999999999999987654321 2345676555444 543
Q ss_pred C-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCc-ccCC--CCC
Q 016668 234 S-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FKY 304 (385)
Q Consensus 234 ~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p--~~g 304 (385)
+ ...+|++++++.+.. ++|+|++++++||+ ..+ +++|.++|+++|+++|+|+++. .+...+. .++. +++
T Consensus 149 ~~g~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~ 226 (385)
T PRK09276 149 ENGFLPDLDAIPEDVAK-KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYS-EIAYDGYKPPSFLEVPG 226 (385)
T ss_pred CCCCcCCHHHHHHhccc-cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchh-heecCCCCCCChhccCC
Confidence 3 346899999888754 78999988778763 444 5788899999999999999974 4443332 2221 222
Q ss_pred ---CcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 305 ---CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 305 ---aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
-.+++.|++|.| +|.|.|++++++ ++.+.+..
T Consensus 227 ~~~~~i~~~S~SK~~g~~GlRiG~~i~~~------~l~~~~~~ 263 (385)
T PRK09276 227 AKDVGIEFHSLSKTYNMTGWRIGFAVGNA------DLIAGLGK 263 (385)
T ss_pred CcCCEEEEecchhhcCCcchhheeeeCCH------HHHHHHHH
Confidence 236789999987 678889999877 56666544
No 88
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.76 E-value=1.9e-16 Score=160.40 Aligned_cols=235 Identities=15% Similarity=0.071 Sum_probs=158.6
Q ss_pred ccCChHHHHHHHHHHHHhh------hccccccCC--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 84 GEADPEVCEIITKEKERQF------KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 84 ~~~dp~~~~~i~~e~~~~~------~~l~Liase--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
+...++.|+.+....++.. .-++|-..+ ..+++.+.+++...+......+|+. .|.+ ++++.+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~----~G~~---~lr~aia~ 92 (410)
T PRK06290 20 KETVIYKFEKIKRAKRAAKEKHPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD----NGIQ---EFKEAAAR 92 (410)
T ss_pred ccCchhHHHHHHHHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC----CCcH---HHHHHHHH
Confidence 4455567777766555432 124554333 3368888888876553322234542 2444 77777888
Q ss_pred HHHHHcCCC-CCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 156 RALAAFNLD-ENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 156 ~la~lfg~~-~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
++.+.+|.+ .+ +..+|..++|+. |+..++.++++|||.|++++|.|.++.. .+...|..+. ++++++
T Consensus 93 ~~~~~~g~~~~~-~~~~I~it~Gs~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~v~--~v~~~~ 161 (410)
T PRK06290 93 YMEKVFGVKDID-PVTEVIHSIGSKPALAMLPSCFINPGDVTLMTVPGYPVTGT--------HTKYYGGEVY--NLPLLE 161 (410)
T ss_pred HHHHHcCCCcCC-CcceEEEccCHHHHHHHHHHHhCCCCCEEEEeCCCCccHHH--------HHHHcCCEEE--EEecCC
Confidence 888888865 21 111477888875 8888999999999999999997655422 2345666444 444654
Q ss_pred C-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCC--CC--
Q 016668 234 S-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK-- 303 (385)
Q Consensus 234 ~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p--~~-- 303 (385)
+ ++.+|++++++.+.. ++|+|+++.|+||+ ..+ +++|.++|+++|++||+|+++. .+...+..++. +.
T Consensus 162 ~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~-~~~~~~~~~s~~~~~~~ 239 (410)
T PRK06290 162 ENNFLPDLDSIPKDIKE-KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYA-ALTFDGKPLSFLSVPGA 239 (410)
T ss_pred CcCCcCCHHHHHHhhcc-cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchh-hceeCCCCcChhcCCCc
Confidence 3 357899999988854 78999998888873 455 6788888999999999999974 44443322221 11
Q ss_pred -CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhcc
Q 016668 304 -YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV 344 (385)
Q Consensus 304 -gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~ 344 (385)
..++++.|++|++ +|.|.|++++++ ++.+.+....
T Consensus 240 ~~~~I~i~SfSK~~g~~GlRiG~ii~~~------~l~~~l~~~~ 277 (410)
T PRK06290 240 KEVGVEIHSLSKAYNMTGWRLAFVVGNE------LIVKAFATVK 277 (410)
T ss_pred cccEEEEeechhhcCCchhheEeEEeCH------HHHHHHHHHH
Confidence 2348899999997 788999999877 5767666544
No 89
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.76 E-value=3.4e-16 Score=157.66 Aligned_cols=238 Identities=16% Similarity=0.101 Sum_probs=155.0
Q ss_pred hhhcccCChHHHHHHHHHHHHhh----hccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQF----KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~----~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~ 153 (385)
++++....+..+..+.....+.+ ..+++-..++ .+++.+.+++...+.+....+|+. .|.+ ++++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~~----~G~~---~lr~ai 78 (399)
T PRK07681 6 ATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYTL----SGIQ---EFHEAV 78 (399)
T ss_pred hHHHhhcCccHHHHHHHHHHHhhhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCCC----CCcH---HHHHHH
Confidence 34455455555555444433221 3355543333 468889998887654321123331 3544 677777
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++++.+.+|.+.+ +..+|.+++|+ +|+..++.++++|||+|++++|.|.++.. .+...|..+ ++++++
T Consensus 79 a~~~~~~~g~~~~-~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~--------~~~~~G~~~--~~v~~~ 147 (399)
T PRK07681 79 TEYYNNTHNVILN-ADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYET--------GIQMAGATS--YYMPLK 147 (399)
T ss_pred HHHHHHHhCCCCC-CCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhcCCEE--EEEecC
Confidence 7788877776432 10146667776 59988999999999999999997765432 234567644 444465
Q ss_pred CCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcc-cCC--CC
Q 016668 233 EST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADP--FK 303 (385)
Q Consensus 233 ~~~-~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p--~~ 303 (385)
+++ +.+|++++++.+.. ++|+|+++.|+|| ...+ +++|.++|+++|++||+|+++ ..+...+.. ++. ++
T Consensus 148 ~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~ 225 (399)
T PRK07681 148 KENDFLPDLELIPEEIAD-KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAY-AEFYFDGNKPISFLSVP 225 (399)
T ss_pred CCCCCcCCHHHHHHhccc-cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhheeCCCCCCChhhCC
Confidence 443 47899999888754 7899998877877 3445 778889999999999999997 455543321 111 12
Q ss_pred C-C--cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 304 Y-C--DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 304 g-a--Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+ . .|++.|++|++ +|.|.|++++++ ++.+++...
T Consensus 226 ~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~------~l~~~~~~~ 264 (399)
T PRK07681 226 GAKEVGVEINSLSKSYSLAGSRIGYMIGNE------EIVRALTQF 264 (399)
T ss_pred CCcccEEEEeecccccCCccceeEEEecCH------HHHHHHHHH
Confidence 2 1 36789999987 688999999876 566666543
No 90
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.75 E-value=1.9e-16 Score=158.65 Aligned_cols=190 Identities=12% Similarity=0.078 Sum_probs=135.7
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHD 193 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pGD 193 (385)
++..++++...+..... ++..+...++| +++++++|.++ .+.+.||+.|+..++.++ ++|||
T Consensus 10 ~~~e~~a~~~~~~~~~~--------~~~g~~~~~~e----~~la~~~g~~~-----~v~~~sgt~aL~~~l~al~~~pGd 72 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL--------SGDGPFSRRCE----TWLENRTGTKK-----ALLTPSCTAALEMAALLLDIQPGD 72 (376)
T ss_pred CHHHHHHHHHHHHcCCc--------cCCcHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCcC
Confidence 45557777666543221 11123344555 46788899876 366778889999888888 89999
Q ss_pred EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHH
Q 016668 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQ 273 (385)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ 273 (385)
+|+++++.|.+.. ..+...|..+. .++++++++.+|++++++.++. ++|+|+... .+|...|+++|.+
T Consensus 73 ~Viv~~~t~~~~~--------~~~~~~G~~~v--~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~~-~~G~~~d~~~I~~ 140 (376)
T TIGR02379 73 EVIMPSYTFVSTA--------NAFVLRGAKIV--FVDIRPDTMNIDETLIESAITH-RTKAIVPVH-YAGVACDMDTIMA 140 (376)
T ss_pred EEEECCCCcHHHH--------HHHHHcCCEEE--EEecCCCcCCCCHHHHHHhcCc-CceEEEEeC-CCCCccCHHHHHH
Confidence 9999988664432 13345676544 4456666678999999999865 789987654 3678889999999
Q ss_pred HHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCcc--C-ccccEEEEEEeCCCCchhHHHHHHh
Q 016668 274 IADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKS--L-RGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 274 ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~--l-~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
+|+++|++||.|++|+.|....+. ++. ..|+.++|+|++ + +|++||+|+++++ ++.+++.
T Consensus 141 la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~-----~~~~~~~ 204 (376)
T TIGR02379 141 LANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQ-----AFIERAE 204 (376)
T ss_pred HHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCH-----HHHHHHH
Confidence 999999999999999877543332 233 458889998854 4 6789999999876 5666554
No 91
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.75 E-value=1.3e-16 Score=158.42 Aligned_cols=241 Identities=16% Similarity=0.136 Sum_probs=153.2
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-- 189 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all-- 189 (385)
..+.+.+.+++...+.. . .+.++ .+.|.. .+++.+++++++++|+++++ .+.+.+|+.++..++.++.
T Consensus 30 ~~~~~~~~~a~~~~~~~-~-~~~~~--~~~~~~---~~~~~~~~~la~~~g~~~~~---~~~~~g~~~~~~~~~~~~~~~ 99 (373)
T TIGR03812 30 TNPHPIAVKAYDMFIET-N-LGDPG--LFPGTK---KIEEEVVGSLGNLLHLPDAY---GYIVSGGTEANIQAVRAAKNL 99 (373)
T ss_pred CCchHHHHHHHHHHhhc-C-CCCcc--cCccHH---HHHHHHHHHHHHHhCCCCCC---eEEeccHHHHHHHHHHHHHHH
Confidence 34566677877655432 2 24443 234433 55666788999999998641 3456677778887776653
Q ss_pred ----cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCC-cEEEEcC-CCCC
Q 016668 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGA-SAYP 263 (385)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~p-klIi~~~-s~~~ 263 (385)
++||+|+++++.|. ++. ..+...|..+..++ ++ +++.+|++++++.+++ ++ +++++.+ +.+|
T Consensus 100 ~~~~~~g~~vl~~~~~h~---~~~-----~~~~~~G~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~vv~~~~~~~tG 167 (373)
T TIGR03812 100 AREEKRTPNIIVPESAHF---SFE-----KAAEMLGLELRYAP--LD-EDYTVDVKDVEDLIDD-NTIGIVGIAGTTELG 167 (373)
T ss_pred HhccCCCcEEEECCcchH---HHH-----HHHHHcCCeEEEEe--eC-CCCCcCHHHHHHHHhh-CcEEEEEECCCCCCC
Confidence 47899999887543 321 13456677665555 44 3578999999999865 44 4555542 2356
Q ss_pred CCCCHHHHHHHHHHcCcEEEEecccccccccc---Ccc--cCCC--CCCcEEEECCCccCccc-cEE-EEEEeCCCCchh
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVV--ADPF--KYCDVVTTTTHKSLRGP-RGG-MIFFKKDPVLGV 334 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~---g~~--~~p~--~gaDiv~~S~hK~l~Gp-rgG-~I~~~~~~~~~~ 334 (385)
...|+++|.++|+++|+++++|++|+.+.... +.. ...+ .++|++++|+||++.+| ++| +++.++
T Consensus 168 ~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~------ 241 (373)
T TIGR03812 168 QIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSK------ 241 (373)
T ss_pred ccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCH------
Confidence 77899999999999999999999997543211 111 1122 27899999999986444 344 444444
Q ss_pred HHHHHHhhccCCC--------ccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhc
Q 016668 335 ELESAINNAVFPG--------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSAC 381 (385)
Q Consensus 335 ~~~~~i~~~~fp~--------~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~ 381 (385)
++.+.+.... +. .+|+++...++++..+++.+..+++++..+++.+
T Consensus 242 ~~~~~l~~~~-~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 242 SYLKYLSVDA-PYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred HHHhhhcccC-cccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4555553211 11 1245666778888888887766666555555443
No 92
>PRK08068 transaminase; Reviewed
Probab=99.75 E-value=2.9e-16 Score=157.55 Aligned_cols=238 Identities=17% Similarity=0.146 Sum_probs=152.1
Q ss_pred hcccCChHHHHHHHHHHHHhh----hcccccc--CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 82 SLGEADPEVCEIITKEKERQF----KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 82 ~l~~~dp~~~~~i~~e~~~~~----~~l~Lia--sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
++.+..+..+..+.+...+.. .-++|-. +...+++.+.+++...+......+|+. ..|.+ +|++.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~---~lr~aia~ 81 (389)
T PRK08068 8 LLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSP---FRGYP---FLKEAAAD 81 (389)
T ss_pred HhhhcCccHHHHHHHHHHHHHhcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCCH---HHHHHHHH
Confidence 344445544444434333321 2244442 233346778888877654332234432 23444 78877778
Q ss_pred HHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC
Q 016668 156 RALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (385)
Q Consensus 156 ~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~ 234 (385)
++.+.+|.+.+ +.-+|..++| ++++..++.++++|||+|++++|.|+.+.. .+...|..+..++ ++++
T Consensus 82 ~~~~~~g~~~~-~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~i~--~~~~ 150 (389)
T PRK08068 82 FYKREYGVTLD-PETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLS--------GVALARAQFETMP--LIAE 150 (389)
T ss_pred HHHHHhCCCCC-CCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCCEEEEee--cccc
Confidence 88777785431 1113445555 568888889999999999999997765432 2346676555444 5544
Q ss_pred -CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCccc-CCCC--C-
Q 016668 235 -TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK--Y- 304 (385)
Q Consensus 235 -~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~p~~--g- 304 (385)
+..+|++++++.+.. ++|+|+++.|+|| ...+ +++|.++|+++|+++|+|+++ ..+.+.+..+ +.+. +
T Consensus 151 ~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay-~~~~~~~~~~~s~~~~~~~ 228 (389)
T PRK08068 151 NNFLPDYTKIPEEVAE-KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAY-GAIGFDGQKPVSFLQTPGA 228 (389)
T ss_pred cCCCCCHHHHHHhccc-cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhh-hhhccCCCCCcChhhCCCc
Confidence 347899999988854 7899988877877 3444 567888999999999999996 3444433211 2122 1
Q ss_pred --CcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhcc
Q 016668 305 --CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV 344 (385)
Q Consensus 305 --aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~ 344 (385)
-.+++.|++|+| +|.|.|+++.++ ++.+.+....
T Consensus 229 ~~~~i~~~S~SK~~g~~GlRiG~~~~~~------~l~~~l~~~~ 266 (389)
T PRK08068 229 KDVGIELYTLSKTFNMAGWRVAFAVGNE------SVIEAINLLQ 266 (389)
T ss_pred cCCEEEEecchhccCCccceeEeEecCH------HHHHHHHHHH
Confidence 227889999997 788999999877 5777665543
No 93
>PRK07550 hypothetical protein; Provisional
Probab=99.75 E-value=5.7e-16 Score=155.22 Aligned_cols=206 Identities=16% Similarity=0.066 Sum_probs=139.5
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKP 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~p 191 (385)
.+++.+.+++.+.+.+.....|+. ..|.+ ++++.+++++.+.+|..... -+|.+++| ++|+..++.++++|
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~ 113 (386)
T PRK07550 42 PPPPELLRALAEAAADPAAHLYGP---VEGLP---ELREAYAAHYSRLYGAAISP--EQVHITSGCNQAFWAAMVTLAGA 113 (386)
T ss_pred CCCHHHHHHHHHHHhCcCCcCCCC---CCCCH---HHHHHHHHHHHHHhCCCCCc--ceEEEecCcHHHHHHHHHHhcCC
Confidence 447788888877653222122322 23555 78888888888888864321 25666666 46999999999999
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC-
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD- 267 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d- 267 (385)
||+|++.+|.+.++.. .+...|..+. +++.+++ ++.+|++++++.++. ++|+|++..++||+ ..+
T Consensus 114 gd~Vlv~~p~y~~~~~--------~~~~~g~~~~--~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~~~~P~NPtG~~~~~ 182 (386)
T PRK07550 114 GDEVILPLPWYFNHKM--------WLDMLGIRPV--YLPCDEGPGLLPDPAAAEALITP-RTRAIALVTPNNPTGVVYPP 182 (386)
T ss_pred CCEEEEcCCCCcchHH--------HHHhcCCEEE--EEecCCCcCCCCCHHHHHHHhcc-cCcEEEEeCCCCCCCcccCH
Confidence 9999999987755422 2345666444 4445533 457899999999865 78887776677763 343
Q ss_pred --HHHHHHHHHHcCcEEEEeccccccccccCccc-CCCC----CCc-EEEECCCccC--ccccEEEEEEeCCCCchhHHH
Q 016668 268 --YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELE 337 (385)
Q Consensus 268 --l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~p~~----gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~ 337 (385)
+++|.++|+++|+++|+|+++. ++...+..+ ..+. +.+ +++.|++|++ +|.|.|++++++ ++.
T Consensus 183 ~~~~~i~~~~~~~~~~iI~Dd~y~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~------~~~ 255 (386)
T PRK07550 183 ELLHELYDLARRHGIALILDETYR-DFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP------ARI 255 (386)
T ss_pred HHHHHHHHHHHHcCeEEEEeccch-hhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH------HHH
Confidence 7899999999999999999973 443322212 1221 122 6789999997 588999999977 566
Q ss_pred HHHhhcc
Q 016668 338 SAINNAV 344 (385)
Q Consensus 338 ~~i~~~~ 344 (385)
+.+....
T Consensus 256 ~~~~~~~ 262 (386)
T PRK07550 256 AEIEKFM 262 (386)
T ss_pred HHHHHHH
Confidence 6555443
No 94
>PRK04311 selenocysteine synthase; Provisional
Probab=99.75 E-value=1.7e-16 Score=162.64 Aligned_cols=227 Identities=16% Similarity=0.153 Sum_probs=145.4
Q ss_pred CCCCcHHHHHHHhhHhhccCCC-CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSE-GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~-g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all 189 (385)
-.+.++.+++++...+.+ |.. .|.-.....| +..+. +++.+++++|+++ .+.++||+.|+..++.+ +
T Consensus 95 ~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g-~r~~~----~e~~lA~l~Gae~-----a~vv~sgtaAl~l~l~~-l 162 (464)
T PRK04311 95 RALLSEAAIEAVTEAARG-YSNLEYDLATGKRG-SRDRA----LAALLCALTGAED-----ALVVNNNAAAVLLALNA-L 162 (464)
T ss_pred CCCCCHHHHHHHHHHHhc-ccccccchhhcccc-hHHHH----HHHHHHHHhCCCe-----EEEECCHHHHHHHHHHH-h
Confidence 345799999999877654 321 1100000112 21233 4567899999986 35678899999888755 6
Q ss_pred cCCCEEeecCCCC---CccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC----
Q 016668 190 KPHDRIMGLDLPH---GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY---- 262 (385)
Q Consensus 190 ~pGD~Vl~~~~~~---ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~---- 262 (385)
.+||+|++++.++ ||..... ..+...|..+. .++.+ +..+++++++.+++ ++++|++..+++
T Consensus 163 ~~GdeVIvs~~e~~~~ggs~~i~-----~~~~~~G~~l~--~v~~~---~~t~~~dle~aI~~-~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 163 AAGKEVIVSRGELVEIGGAFRIP-----DVMRQAGARLV--EVGTT---NRTHLRDYEQAINE-NTALLLKVHTSNYRIE 231 (464)
T ss_pred CCCCEEEEcchhhhhcCcchhhH-----HHHHHCCcEEE--EECCC---CCCCHHHHHHhcCc-cCeEEEEEcCCCcccc
Confidence 8999999987543 2211110 12345566443 33332 34679999999975 688887654443
Q ss_pred --CCCCCHHHHHHHHHHcCcEEEEeccccccccc---------cCcccCCCC-CCcEEEECCCccCccccEEEEEEeCCC
Q 016668 263 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVA---------ASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (385)
Q Consensus 263 --~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~---------~g~~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~ 330 (385)
....|+++|+++|+++|+++++|+++ |... ......+++ |+|++++|+||+|.||++|++++++
T Consensus 232 G~~~~~dl~eI~~lak~~gi~vivD~gs--G~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~-- 307 (464)
T PRK04311 232 GFTKEVSLAELAALGKEHGLPVVYDLGS--GSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKK-- 307 (464)
T ss_pred ccCCcCCHHHHHHHHHHcCCeEEEECCC--cccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcH--
Confidence 24579999999999999999999953 3221 111123444 8999999999999999999999987
Q ss_pred CchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhC
Q 016668 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 331 ~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~ 369 (385)
++.+++.+...--.. ...-.+++++..+|.....
T Consensus 308 ----~li~~l~~~~~~r~l-r~dk~~l~~l~~~l~~~~~ 341 (464)
T PRK04311 308 ----ELIARLKKHPLKRAL-RVDKLTLAALEATLRLYLD 341 (464)
T ss_pred ----HHHHHHhhchhHHHH-hcchHHHHHHHHHHHHHhC
Confidence 566666532111000 1234567777777775544
No 95
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.75 E-value=1.8e-16 Score=160.31 Aligned_cols=208 Identities=13% Similarity=0.102 Sum_probs=143.2
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKP 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~p 191 (385)
.+++.+.+++...+.+....+|+. ..|.+ ++++.+++++++.+|.+.+ +.-+|..++| ++|+..++.++++|
T Consensus 53 ~p~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~l~~~~g~~~~-~~~~I~it~Ga~~al~~~~~~l~~~ 125 (405)
T PRK06207 53 EPTPGAFELFSAGVERGGVQAYTE---YRGDA---DIRELLAARLAAFTGAPVD-AADELIITPGTQGALFLAVAATVAR 125 (405)
T ss_pred CCCHHHHHHHHHHHhcCCCccCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCCEEEeCCcHHHHHHHHHHhcCC
Confidence 356788888877665432335554 23554 6888888899999996421 1013555565 56999999999999
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccc-cC-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DE-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD 267 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~-~~-~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d 267 (385)
||+|++.+|.|.++.. .+...|..+..++++. ++ +++.+|+++|++.++. ++|+|+++.|+||+ ..+
T Consensus 126 Gd~Vlv~~P~y~~~~~--------~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~-~~k~v~l~~P~NPTG~~~s 196 (405)
T PRK06207 126 GDKVAIVQPDYFANRK--------LVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA-GVRVFLFSNPNNPAGVVYS 196 (405)
T ss_pred CCEEEEeCCCchhHHH--------HHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh-cCeEEEECCCCCCCCcCCC
Confidence 9999999997755421 3345666554444321 11 2457999999998865 68988888888873 444
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCc-ccCCC--C-CCc--EEEECCCccC--ccccEEEEEEeCCCCchhHH
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K-YCD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVEL 336 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~--~-gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~ 336 (385)
+++|.++|+++|++||+|+++ ..+.+.+. ++... . ..| +++.|++|++ +|.|.|++++++ ++
T Consensus 197 ~e~l~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~------~l 269 (405)
T PRK06207 197 AEEIAQIAALARRYGATVIVDQLY-SRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP------AI 269 (405)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccc-cccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH------HH
Confidence 778899999999999999996 45554432 22211 2 123 6889999997 699999999887 56
Q ss_pred HHHHhhc
Q 016668 337 ESAINNA 343 (385)
Q Consensus 337 ~~~i~~~ 343 (385)
.+++...
T Consensus 270 ~~~~~~~ 276 (405)
T PRK06207 270 IDRMEKL 276 (405)
T ss_pred HHHHHHH
Confidence 6666543
No 96
>PRK08912 hypothetical protein; Provisional
Probab=99.75 E-value=3.9e-16 Score=156.44 Aligned_cols=237 Identities=14% Similarity=0.107 Sum_probs=155.7
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhccccc--cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELI--ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Li--asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
++++...++.++..+.+.... ...++|- .++...++.+.+++...+.+.. .+|+. ..|.+ ++++..++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~ia~~~ 76 (387)
T PRK08912 5 NPVFADLPTTIFEVMSQLARE-HGAINLGQGFPDDPGPEDVRRAAADALLDGS-NQYPP---MMGLP---ELRQAVAAHY 76 (387)
T ss_pred hHHHhhCCCCHHHHHHHHHhh-CCeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCcH---HHHHHHHHHH
Confidence 445666667666655554332 1334443 2344456778887766554322 23544 23544 6777778888
Q ss_pred HHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 158 LAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 158 a~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
.+.+|.+.+ +..+|..++| +.|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++++++
T Consensus 77 ~~~~g~~~~-~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~ 145 (387)
T PRK08912 77 ARFQGLDLD-PETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLP--------LIRRAGGVPRLVR--LEPPHW 145 (387)
T ss_pred HHHhCCCCC-CcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEe--cCcccC
Confidence 888886432 2113555555 569999999999999999999987654321 3356676555444 554457
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCc-ccCC--CC---CC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK---YC 305 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p--~~---ga 305 (385)
.+|++++++.+.. ++|+|++..++||+ ..+ +++|.++|+++|+++|+|+++. .+.+.+. .+.. +. ..
T Consensus 146 ~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~ 223 (387)
T PRK08912 146 RLPRAALAAAFSP-RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWE-HVVFDGRRHIPLMTLPGMRER 223 (387)
T ss_pred cCCHHHHHHHhCc-cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhh-hcccCCCCCcChhhCCCccCc
Confidence 8999999998864 78988888777763 444 7779999999999999999974 4444331 1111 11 23
Q ss_pred cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 306 Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
++++.|++|.+ +|.|.|++++++ ++.+.+...
T Consensus 224 ~i~~~S~SK~~g~~GlRiG~~~~~~------~~~~~l~~~ 257 (387)
T PRK08912 224 TVKIGSAGKIFSLTGWKVGFVCAAP------PLLRVLAKA 257 (387)
T ss_pred eEEEeechhhccCcCceeEEEecCH------HHHHHHHHH
Confidence 58899999996 678899999987 566665443
No 97
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.75 E-value=1.7e-17 Score=167.39 Aligned_cols=168 Identities=23% Similarity=0.264 Sum_probs=124.9
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|...|| +++..+++|+ ++++++|+++. +.+.||+.|+..++.++++|||+|+++++.|+++.....
T Consensus 56 ~~~y~r~--~~p~~~~Le~----~lA~l~G~~~~-----~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~-- 122 (398)
T PRK07504 56 GFIYSRY--SNPTVDMFEK----RMCALEGAEDA-----RATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVE-- 122 (398)
T ss_pred CceeecC--CCchHHHHHH----HHHHHhCCCee-----eEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHH--
Confidence 3444444 5566667775 68899999873 347799999998888899999999999988776532100
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
......|.. +..+ + .+|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..
T Consensus 123 --~~~~~~G~~--v~~v--d----~~d~e~l~~ai~~-~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~ 191 (398)
T PRK07504 123 --TLLPRYGIE--STLV--D----GLDLDNWEKAVRP-NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFAT 191 (398)
T ss_pred --HHHhhcCeE--EEEE--C----CCCHHHHHHhcCc-CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccc
Confidence 011234543 3332 2 3799999998864 7899999888875 578999999999999999999999876
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCccc--c-EEEEEEeCC
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKD 329 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gp--r-gG~I~~~~~ 329 (385)
++. ..+++ ++|++++|+||++.|+ + ||+++++++
T Consensus 192 ~~~-----~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~ 229 (398)
T PRK07504 192 PLF-----QKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKA 229 (398)
T ss_pred ccc-----CCchhhCCCEEEeeccccccCCccceEEEEEeCcH
Confidence 543 34556 8999999999999664 3 578888774
No 98
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=1.9e-17 Score=166.40 Aligned_cols=166 Identities=14% Similarity=0.053 Sum_probs=126.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
|-+.|. ||++.+.||+ +++++.|.+. .+.+.||+.|+.+++.+++++||+|++.+..|++.....
T Consensus 54 ~~YsR~--~nPt~~~le~----~la~LEg~~~-----a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~---- 118 (395)
T PRK08114 54 LFYGRR--GTLTHFSLQE----AMCELEGGAG-----CALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFC---- 118 (395)
T ss_pred ccccCC--CChhHHHHHH----HHHHHhCCCe-----EEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHH----
Confidence 445543 8999998887 5788889876 366788999999999999999999999877665532110
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcC--cEEEEecccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVG--ALLMMDMAHI 289 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~g--a~livD~ah~ 289 (385)
...+...|..+..+ + ..|.+++++.+++ ++|+|++..+.++ ...|+++|+++||++| +++++|++++
T Consensus 119 ~~~l~~~Gi~v~~v--d------~~d~~~l~~~l~~-~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a 189 (395)
T PRK08114 119 SKILSKLGVTTTWF--D------PLIGADIAKLIQP-NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWA 189 (395)
T ss_pred HHHHHhcCcEEEEE--C------CCCHHHHHHhcCC-CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCc
Confidence 01123346544332 2 2478999999865 7899999888776 5689999999999984 9999999997
Q ss_pred ccccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 290 ~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
.++. ..|++ |+|++++|.||++.|+. +|+++.++
T Consensus 190 ~p~~-----~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~ 227 (395)
T PRK08114 190 AGVL-----FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANA 227 (395)
T ss_pred cccc-----cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCH
Confidence 7654 46777 99999999999999984 57666555
No 99
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.75 E-value=3.5e-17 Score=164.01 Aligned_cols=166 Identities=17% Similarity=0.110 Sum_probs=123.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
|.+.| .|++..+.||+ .++++.|.+. .+.+.||+.|+..++.++++|||+|+++++.|++... ..
T Consensus 42 ~~Y~r--~gnPt~~~lE~----~lA~l~g~~~-----~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~--~~-- 106 (377)
T TIGR01324 42 LTYGR--RGTLTHFALQD----AMCELEGGAG-----CYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRY--FC-- 106 (377)
T ss_pred CcccC--CCCccHHHHHH----HHHHHhCCCc-----EEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHH--HH--
Confidence 33444 38888888886 5788999876 3667899999999999999999999999887654211 00
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
.......|..+. .++.+ +.+.+++.+++ ++|+|+++.++++ ...|+++|+++|+++|+++++|++|..|
T Consensus 107 ~~~~~~~gi~v~--~~d~~------~~e~l~~~i~~-~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g 177 (377)
T TIGR01324 107 DIVLKRMGVDIT--YYDPL------IGEDIATLIQP-NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAG 177 (377)
T ss_pred HHHHHhcCcEEE--EECCC------CHHHHHHhcCC-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccc
Confidence 001223454333 32211 23788888865 7899999877765 5679999999999999999999999877
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
... .|++ ++|++++|+||++.|+. ||++++++
T Consensus 178 ~~~-----~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~ 213 (377)
T TIGR01324 178 LLF-----KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANA 213 (377)
T ss_pred ccc-----CccccCceEEEecCceeccCCCCceEEEEEeCH
Confidence 542 4566 89999999999998874 68888776
No 100
>PRK07777 aminotransferase; Validated
Probab=99.75 E-value=3.5e-16 Score=156.82 Aligned_cols=234 Identities=15% Similarity=0.135 Sum_probs=151.8
Q ss_pred hcccCChHHHHHHHHHHHHhhhccccc--cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHH
Q 016668 82 SLGEADPEVCEIITKEKERQFKSLELI--ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (385)
Q Consensus 82 ~l~~~dp~~~~~i~~e~~~~~~~l~Li--asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~ 159 (385)
++..++++++.-+.+..... ..++|- .++...++.+.+++...+.... .+|+. ..|.+ ++++.+.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~~---~lr~~ia~~~~~ 76 (387)
T PRK07777 5 RLRPFGTTIFAEMSALAVRT-GAVNLGQGFPDEDGPPEMLEAAQEAIAGGV-NQYPP---GPGIP---ELRAAIAAQRRR 76 (387)
T ss_pred hhhhcCccHHHHHHHHHhhC-CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCCH---HHHHHHHHHHHH
Confidence 45566666665554444322 334544 2333445667777666554322 23433 12444 788777788888
Q ss_pred HcCCCCCCCcceeecCC-cHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC--CC
Q 016668 160 AFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TG 236 (385)
Q Consensus 160 lfg~~~~~~~~~V~~~s-Gs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~--~~ 236 (385)
.+|.+.+ +.-+|..++ |+.|+.+++.++++|||+|++..|.|.++. ..+...|..+..++ ++++ ++
T Consensus 77 ~~g~~~~-~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~--------~~~~~~g~~~~~~~--~~~~~~~~ 145 (387)
T PRK07777 77 RYGLEYD-PDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA--------AVIAMAGAHRVPVP--LVPDGRGF 145 (387)
T ss_pred HhCCCCC-CCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH--------HHHHHCCCEEEEee--cCCccCCC
Confidence 8888642 111244455 566999999999999999999988665432 12345566544444 4433 45
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C---CC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YC 305 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~---ga 305 (385)
.+|++++++.+.+ ++|+|+++.++||+ .. ++++|.++|+++|+++|+|+++ .++.+.+....++ . +.
T Consensus 146 ~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y-~~~~~~~~~~~~~~~~~~~~~~ 223 (387)
T PRK07777 146 ALDLDALRAAVTP-RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVY-EHLVFDGARHLPLATLPGMRER 223 (387)
T ss_pred cCCHHHHHHhcCc-ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccc-hhcccCCCCcccHhhCCCCcCc
Confidence 7999999998864 78999888777763 33 4889999999999999999997 4555433211122 1 24
Q ss_pred cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 306 Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
++++.|++|+| +|.|.|++++++ ++.+.+..
T Consensus 224 ~i~~~S~SK~~g~~GlRiG~~~~~~------~l~~~~~~ 256 (387)
T PRK07777 224 TVTISSAAKTFNVTGWKIGWACGPA------PLIAAVRA 256 (387)
T ss_pred EEEEeechhhccCcCceeEEEecCH------HHHHHHHH
Confidence 58899999997 578889999877 56665544
No 101
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.75 E-value=2.4e-17 Score=166.56 Aligned_cols=167 Identities=20% Similarity=0.241 Sum_probs=125.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
|.+.|| |++..+++|+ ++++++|.+. .+.+.||+.|+..++.++++|||+|++.+..|++.... +
T Consensus 62 ~~Y~r~--~~p~~~~le~----~lA~l~g~~~-----al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~-~--- 126 (403)
T PRK07810 62 FVYSRY--GNPTVSMFEE----RLRLIEGAEA-----CFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVV-C--- 126 (403)
T ss_pred cceeCC--CCchHHHHHH----HHHHHhCCCc-----EEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHH-H---
Confidence 334443 6677777776 5889999876 47789999999999999999999999988666543210 0
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
...+...|..+..+ +. .|++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|+++++|++|..+
T Consensus 127 ~~~~~~~G~~v~~v--d~------~d~~~l~~ai~~-~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~ 197 (403)
T PRK07810 127 NEILPRWGVETVFV--DG------EDLSQWEEALSV-PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATP 197 (403)
T ss_pred HHHHHHcCcEEEEE--CC------CCHHHHHHhcCc-CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 01233456544333 22 389999999865 7899999877765 5679999999999999999999998766
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCC
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~ 329 (385)
+. ..+++ ++|++++|+||++.|+- ||+|+++++
T Consensus 198 ~~-----~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~ 234 (403)
T PRK07810 198 LL-----QRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDRE 234 (403)
T ss_pred cc-----CChhhcCCcEEEccCCceecCCcCceeEEEEeChH
Confidence 43 23455 89999999999997643 688888874
No 102
>PRK15029 arginine decarboxylase; Provisional
Probab=99.75 E-value=2.4e-17 Score=176.05 Aligned_cols=200 Identities=16% Similarity=0.102 Sum_probs=146.8
Q ss_pred HHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 152 ~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
.+++.++++||++.. .+.++|| .+|.++++++++|||+|++.. ++|.|.- ..+.+.|....++.-.
T Consensus 209 eAq~~aA~~fgA~~t-----~FlvNGST~gn~a~i~a~~~~gd~Vlv~R---N~HKSv~-----~al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 209 ESEKYAARVFGADRS-----WSVVVGTSGSNRTIMQACMTDNDVVVVDR---NCHKSIE-----QGLILTGAKPVYMVPS 275 (755)
T ss_pred HHHHHHHHHhCCCcE-----EEEeCChhHHHHHHHHHhcCCCCEEEeec---ccHHHHH-----HHHHHcCCeEEEeccc
Confidence 467789999999984 3445666 599999999999999999876 4665532 1456777765555322
Q ss_pred ccCCCC---CCC-----HHHHHHHhhhc---------CCcEEEE-cCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccc
Q 016668 231 LDESTG---LVD-----YDMLEKTAILF---------RPKLIIA-GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGL 292 (385)
Q Consensus 231 ~~~~~~---~iD-----~d~le~~i~~~---------~pklIi~-~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (385)
.+ +.| .++ ++.+++.++.+ +|+++++ +++.+|...|+++|+++|+++|+.|++|+||++.+
T Consensus 276 ~~-~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGah~ 354 (755)
T PRK15029 276 RN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccccc
Confidence 32 233 355 89999888653 2335555 45557899999999999999999999999999887
Q ss_pred cccCccc--CCC-------CCCc-EEEECCCccCccc-cEEEEEEeCC--CCchhHHHHHHhhccCCCccCCChHHHHHH
Q 016668 293 VAASVVA--DPF-------KYCD-VVTTTTHKSLRGP-RGGMIFFKKD--PVLGVELESAINNAVFPGLQGGPHNHTIGG 359 (385)
Q Consensus 293 i~~g~~~--~p~-------~gaD-iv~~S~hK~l~Gp-rgG~I~~~~~--~~~~~~~~~~i~~~~fp~~qg~p~~~~iaa 359 (385)
.+...+| +++ .|+| +++.|+||+|++. ++++|..+.+ .+ + .++++.+......++|++..+|+
T Consensus 355 ~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~i---d-~~r~~~~l~~~qSTSPSY~LmAS 430 (755)
T PRK15029 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAI---N-FSRFNQAYMMHATTSPLYAICAS 430 (755)
T ss_pred ccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCcccc---C-HHHHHHHHHHHcCCCcHHHHHHH
Confidence 7665554 455 3788 8999999999887 5578877554 11 1 24566554444456899999999
Q ss_pred HHHHHHHhhC
Q 016668 360 LAVCLKHAQS 369 (385)
Q Consensus 360 la~Al~e~~~ 369 (385)
+.+|.+.+..
T Consensus 431 LD~ar~~m~~ 440 (755)
T PRK15029 431 NDVAVSMMDG 440 (755)
T ss_pred HHHHHHHHhh
Confidence 9999988765
No 103
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.75 E-value=2.3e-16 Score=155.05 Aligned_cols=236 Identities=17% Similarity=0.148 Sum_probs=154.1
Q ss_pred cccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHH
Q 016668 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (385)
Q Consensus 107 Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~ 186 (385)
+.|....+++.|++++.... +++ ...+. ++.+..++.+++++|+++... ..+.+.+||.++..++.
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~-~~~-----------~~~~~-~~~~~~~~~la~~~~~~~~~~-~i~~~~~gt~~l~~~~~ 68 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDW-CHW-----------DSEFN-DVTDQVRDRLLALAGGDDNHT-CVLLQGSGTFAVEATIG 68 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhc-cCC-----------CHHHH-HHHHHHHHHHHHHhcCCCCCc-EEEEeCCcHHHHHHHHH
Confidence 45778888999999988632 111 11222 333346788999999986321 12346788899999999
Q ss_pred HhccCCCEEeecCCC-CCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-CCcEEEEcCC--CC
Q 016668 187 AILKPHDRIMGLDLP-HGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGAS--AY 262 (385)
Q Consensus 187 all~pGD~Vl~~~~~-~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-~pklIi~~~s--~~ 262 (385)
+++++||++++.++. ++.... ..+...|..+..++ .+ +++.+|++++++.+++. ++++|++..+ .+
T Consensus 69 ~~~~~~~~vi~~~~~~~~~~~~-------~~a~~~g~~~~~i~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~ 138 (355)
T TIGR03301 69 SLVPRDGKLLVLINGAYGERLA-------KICEYLGIPHTDLN--FS-EYEPPDLNRIEEALAADPDITHVATVHHETTT 138 (355)
T ss_pred hccCCCCeEEEECCCchhhHHH-------HHHHHcCCceEEEe--cC-CCCCCCHHHHHHHHHhCCCceEEEEEecCCcc
Confidence 999999987765532 221100 12234566555554 43 24679999999998652 3455554333 34
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
+...|+++|.++|+++|+++++|++|+.|.. +.++. +.|++++|+||++.||.| |+++++++ +.+.
T Consensus 139 G~~~~~~~i~~l~~~~~~~livD~~~s~g~~-----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~------~~~~ 207 (355)
T TIGR03301 139 GILNPLEAIAKVARSHGAVLIVDAMSSFGAI-----PIDIEELDVDALIASANKCLEGVPGFGFVIARRD------LLEA 207 (355)
T ss_pred cchhHHHHHHHHHHHcCCEEEEEeccccCCc-----ccchhhcCccEEEecCCcccccCCceeEEEECHH------HHHH
Confidence 6778999999999999999999998866532 22233 689999999999977766 89988874 4444
Q ss_pred HhhccC----------------CCccCCChHHHHHHHHHHHHHhhCch-HHHHHH
Q 016668 340 INNAVF----------------PGLQGGPHNHTIGGLAVCLKHAQSPE-FKVYQN 377 (385)
Q Consensus 340 i~~~~f----------------p~~qg~p~~~~iaala~Al~e~~~~~-~~~y~~ 377 (385)
+..... .....+++...+.++..+++.+..++ +.+..+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~ 262 (355)
T TIGR03301 208 SAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIA 262 (355)
T ss_pred hhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 331100 01123567778888888888776554 443333
No 104
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.75 E-value=2.7e-17 Score=166.32 Aligned_cols=167 Identities=20% Similarity=0.235 Sum_probs=124.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++|+ .+++++|.++ .+.++||+.|+..++.++++|||+|++..+.|++..... ...+...|
T Consensus 63 ~~p~~~~le~----~lA~l~g~~~-----~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~----~~~~~~~G 129 (403)
T PRK07503 63 SNPTLALLEQ----RMASLEGGEA-----AVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFL----HHGLGEFG 129 (403)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHH----HHHHhhCC
Confidence 4566667765 6889999976 367889999999999999999999999988775432200 01223455
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+. .++. .|++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|++|..+.. .
T Consensus 130 ~~v~--~vd~------~d~~~l~~~i~~-~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~-----~ 195 (403)
T PRK07503 130 VTVR--HVDL------TDPAALKAAISD-KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYL-----Q 195 (403)
T ss_pred EEEE--EeCC------CCHHHHHHhcCc-cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 5433 3222 378999998865 7899998777665 577999999999999999999999865532 2
Q ss_pred CCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~ 341 (385)
.++. ++|++++|++|++.|+ +||+++.++ ++.+++.
T Consensus 196 ~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~------~l~~~l~ 235 (403)
T PRK07503 196 RPLELGADLVVHSATKYLGGHGDITAGLVVGGK------ALADRIR 235 (403)
T ss_pred CchhhCCCEEEccccccccCCCceeEEEEEcCH------HHHHHHH
Confidence 4455 8999999999999775 478888655 5666664
No 105
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.75 E-value=3.4e-17 Score=165.37 Aligned_cols=167 Identities=19% Similarity=0.210 Sum_probs=125.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++...+||+ .+++++|.+. .+.+.||+.|+.+++.++++|||+|+++++.|++..... ...+...|
T Consensus 62 ~~p~~~~Le~----~iA~~~g~~~-----~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~----~~~~~~~G 128 (400)
T PRK06234 62 GNPTSTEVEN----KLALLEGGEA-----AVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALL----NHGLTRYG 128 (400)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH----HHHHhhCC
Confidence 4565667776 5788899764 467889999999999999999999999988776543210 01224456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHc--CcEEEEeccccccccccCc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASV 297 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~ 297 (385)
..+. .++. .|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++ |+++++|++|..+..
T Consensus 129 ~~v~--~vd~------~d~e~l~~~i~~-~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~---- 195 (400)
T PRK06234 129 VEVT--FVDT------SNLEEVRNALKA-NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYI---- 195 (400)
T ss_pred eEEE--EECC------CCHHHHHHHhcc-CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhc----
Confidence 5433 3322 389999998865 7899999888765 578999999999997 999999999866532
Q ss_pred ccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 298 VADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 298 ~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
..+++ ++|++++|++|++.|+. ||++++++ ++.+++.
T Consensus 196 -~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~------~~~~~l~ 236 (400)
T PRK06234 196 -QRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE------EFINQVK 236 (400)
T ss_pred -CCchhhCCcEEEeeccccccCCCCceeEEEEecH------HHHHHHH
Confidence 24555 89999999999997653 69999887 4555554
No 106
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.75 E-value=3.2e-17 Score=164.50 Aligned_cols=174 Identities=22% Similarity=0.306 Sum_probs=126.4
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
+...|| +++..+++|+ ++++++|++. .+.+.||+.|+.+++.++++|||+|++.++.|++.... +
T Consensus 46 ~~y~r~--~~p~~~~le~----~la~l~g~~~-----~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~-~--- 110 (380)
T TIGR01325 46 FVYSRY--ANPTVAAFEE----RIAALEGAER-----AVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGF-I--- 110 (380)
T ss_pred cceecC--CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHH-H---
Confidence 444444 4565666765 6888999975 35688999999999999999999999988766653210 0
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
...+...|..+..++ . .|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..+
T Consensus 111 ~~~~~~~g~~v~~v~--~------~d~~~l~~~i~~-~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~ 181 (380)
T TIGR01325 111 SEILPRFGIEVSFVD--P------TDLNAWEAAVKP-NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATP 181 (380)
T ss_pred HHHHHHhCCEEEEEC--C------CCHHHHHHhcCC-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCccc
Confidence 012234555443332 2 278999988864 7899999877765 5779999999999999999999998654
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.. ..|++ ++|++++|+||++.|+ .||++++++ ++.+++..
T Consensus 182 ~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~------~~~~~l~~ 225 (380)
T TIGR01325 182 VL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSE------ELMAEVAV 225 (380)
T ss_pred cc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCH------HHHHHHHH
Confidence 32 24566 8999999999999775 368888877 45555543
No 107
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=3.8e-17 Score=164.44 Aligned_cols=160 Identities=16% Similarity=0.119 Sum_probs=119.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
|++....||+ +++++.|.+. .+.+.||+.|+..++.++++|||+|+++++.|++..... ...+...|
T Consensus 59 ~npt~~~Le~----~iA~le~~~~-----~~~~~sG~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~----~~~l~~~G 125 (394)
T PRK09028 59 GTPTHFAFQA----AIVELEGGAG-----TALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLC----DKILKGFG 125 (394)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHhhhhcc
Confidence 5666667775 5677777754 356788999999999999999999999998775543210 01122345
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+. .++. -|.+.+++.+++ ++|+|+++.++|| ...|+++|+++|+++|+++++|++|..++ ..
T Consensus 126 i~v~--~v~~------~~~e~l~~~l~~-~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~-----~~ 191 (394)
T PRK09028 126 IETT--YYDP------MIGEGIRELIRP-NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPI-----NS 191 (394)
T ss_pred eEEE--EECC------CCHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccccc-----cC
Confidence 4333 2221 256788888864 7999999988887 46799999999999999999999997654 24
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
.|++ |+|+++.|.|||+.|+. +|+++.++
T Consensus 192 ~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~ 224 (394)
T PRK09028 192 RPFEMGVDISIQAATKYIVGHSDVMLGTATANE 224 (394)
T ss_pred CccccCceEEEEeCCeEecCCCCEEEEEEECCH
Confidence 6777 89999999999999984 57665554
No 108
>PRK07324 transaminase; Validated
Probab=99.74 E-value=1.4e-16 Score=159.22 Aligned_cols=198 Identities=20% Similarity=0.209 Sum_probs=132.8
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCCcceeecCCc-HHHHHHHHHHhcc
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSG-SPANFEVYTAILK 190 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lf-g~~~~~~~~~V~~~sG-s~A~~~a~~all~ 190 (385)
.+++.+ +++...+.+.. .+|.. ..|.+ ++++. +++++ +++++ +|.+++| +.|+..++.++++
T Consensus 39 ~~~~~~-~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~----ia~~~~~~~~~----~vi~t~G~~~al~~~~~~l~~ 102 (373)
T PRK07324 39 LAGKNP-EAFYQELGQKK-LTYGW---IEGSP---EFKEA----VASLYQNVKPE----NILQTNGATGANFLVLYALVE 102 (373)
T ss_pred ccCcch-HHHHHHHhcCC-ccCCC---CCCCH---HHHHH----HHHHhcCCChh----hEEEcCChHHHHHHHHHHhCC
Confidence 345555 55544443321 23433 23554 56654 45555 35553 4555555 5699999999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
|||+|++..|.+.++.. .+...|..+..++ +++++ +.+|++++++.+.. ++|+|+++.++|| ...+
T Consensus 103 ~gd~Vl~~~P~y~~~~~--------~~~~~g~~v~~v~--~~~~~~~~~d~~~l~~~~~~-~~kli~i~~p~NPtG~~~~ 171 (373)
T PRK07324 103 PGDHVISVYPTYQQLYD--------IPESLGAEVDYWQ--LKEENGWLPDLDELRRLVRP-NTKLICINNANNPTGALMD 171 (373)
T ss_pred CCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--cccccCCCCCHHHHHHhCCC-CCcEEEEeCCCCCCCCCCC
Confidence 99999999886544321 2345676555444 55433 46899999998864 7899999888876 4556
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCC--cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHH
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYC--DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~ga--Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i 340 (385)
+++|+++|+++|+++++|+++ .++...+..++..+.. .+++.|++|++ +|+|.|++++++ ++.+.+
T Consensus 172 ~~~l~~i~~~a~~~~~~ii~De~y-~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~------~li~~~ 244 (373)
T PRK07324 172 RAYLEEIVEIARSVDAYVLSDEVY-RPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANE------EVIDIL 244 (373)
T ss_pred HHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCH------HHHHHH
Confidence 889999999999999999996 5665544333333322 37889999986 689999999965 677777
Q ss_pred hhcc
Q 016668 341 NNAV 344 (385)
Q Consensus 341 ~~~~ 344 (385)
....
T Consensus 245 ~~~~ 248 (373)
T PRK07324 245 RKYR 248 (373)
T ss_pred HHHh
Confidence 6544
No 109
>PLN02656 tyrosine transaminase
Probab=99.74 E-value=3.1e-16 Score=158.63 Aligned_cols=232 Identities=15% Similarity=0.046 Sum_probs=148.1
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhcc
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILK 190 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~ 190 (385)
..+++.+++++.+.+......+|.. ..|.+ ++++...+++.+.+|.+.+ + .+|..++| ++|+..++.++++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~-~-~~i~~t~G~~~al~~~~~~l~~ 118 (409)
T PLN02656 47 FHTTHVAQEAVVDALQSNKFNGYAP---TVGLP---QARRAIAEYLSRDLPYKLS-L-DDVFITSGCTQAIDVALSMLAR 118 (409)
T ss_pred CCCCHHHHHHHHHHHhcCCCCCCCC---CCCCH---HHHHHHHHHHHHhcCCCCC-c-ccEEEeCChHHHHHHHHHHHhC
Confidence 4668999999987766543334533 12444 6777667777776665421 1 14555555 5699999999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C--
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--D-- 265 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~-- 265 (385)
|||+|++++|.|..+.. .....|..+..++ ++++ ++.+|++++++.++. ++++|++..++||+ .
T Consensus 119 ~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~i~--~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~s 187 (409)
T PLN02656 119 PGANILLPRPGFPIYEL--------CAAFRHLEVRYVD--LLPEKGWEVDLDAVEALADQ-NTVALVIINPGNPCGNVYS 187 (409)
T ss_pred CCCeEEEeCCCCCcHHH--------HHHHcCCEEEEEe--CCCcCCCCCCHHHHHHHhcc-CceEEEEECCCCCCCCCCC
Confidence 99999999987654311 2345666555554 4433 457999999998854 67888777777764 3
Q ss_pred -CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCCc--EEEECCCccC--ccccEEEEEEeCCCCc--hhH
Q 016668 266 -FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCD--VVTTTTHKSL--RGPRGGMIFFKKDPVL--GVE 335 (385)
Q Consensus 266 -~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~--~~~ 335 (385)
.++++|.++|+++|++||+|+++ .++.+.+....++ +..+ +++.|++|+| +|+|.|++++.++... -.+
T Consensus 188 ~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~ 266 (409)
T PLN02656 188 YQHLKKIAETAEKLKILVIADEVY-GHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPK 266 (409)
T ss_pred HHHHHHHHHHHHHcCCEEEEehhh-hhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHH
Confidence 35889999999999999999996 4666544221222 2222 5789999984 8899999998521000 014
Q ss_pred HHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 336 LESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 336 ~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+.+++...... .++++.....+++.+++
T Consensus 267 ~~~~~~~~~~~--~~~~s~~~q~a~~~~l~ 294 (409)
T PLN02656 267 IVERIKKYFDI--LGGPATFIQAAVPTILE 294 (409)
T ss_pred HHHHHHHHHhh--hcCCCHHHHHHHHHHHh
Confidence 65655543222 12333334444455554
No 110
>PRK05968 hypothetical protein; Provisional
Probab=99.74 E-value=2.9e-17 Score=165.34 Aligned_cols=173 Identities=18% Similarity=0.152 Sum_probs=126.5
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
+.+.|+ +++..+++|+ ++++++|.++ .+.++||+.|+..++.++++|||+|++..+.|++...- + .
T Consensus 55 ~~Y~r~--~~p~~~~le~----~lA~l~g~~~-----av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~-~-~- 120 (389)
T PRK05968 55 PIYSRG--DNPTVRAFEE----MLAKLEGAED-----ARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRL-F-E- 120 (389)
T ss_pred ccccCC--CChhHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHH-H-H-
Confidence 444443 5676777776 5889999986 36678999999999999999999999998877654220 0 0
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
..+...|..+..+ +. .|++++++.+ . ++|+|+++.+.++ ...|+++|.++|+++|+++++|++|..+
T Consensus 121 -~~~~~~G~~v~~v--d~------~d~~~l~~~i-~-~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 121 -TILKRMGVEVDYV--DG------RDEEAVAKAL-P-GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred -HHHHHcCceEEEe--CC------CCHHHHHHhc-c-cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcch
Confidence 1233456544332 22 3889999887 3 6899988776654 4578999999999999999999998665
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.. ..|+. ++|++++|+||++.|| .||+++.++ ++.+++..
T Consensus 190 ~~-----~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~------~~~~~l~~ 233 (389)
T PRK05968 190 VF-----QRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK------EHIARINA 233 (389)
T ss_pred hc-----cCchhcCCcEEEeeccccccCCCCeEEEEEEECH------HHHHHHHH
Confidence 42 23455 8999999999999886 578888766 56666654
No 111
>PLN02242 methionine gamma-lyase
Probab=99.74 E-value=4.5e-17 Score=165.32 Aligned_cols=169 Identities=18% Similarity=0.174 Sum_probs=124.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..++||+ ++++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|+++.... .. ......|
T Consensus 74 ~~Pt~~~LE~----~lA~l~g~~~-----~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~--~~-~~~~~~G 141 (418)
T PLN02242 74 FNPTVLNLGR----QMAALEGTEA-----AYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALL--AH-FLPRKCN 141 (418)
T ss_pred CChhHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHH--HH-hhhhccC
Confidence 6787888876 5889999987 356789999999999999999999999988776542200 00 0012245
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
.. +..++ ..|++++++.+++.++|+|+++.++|| ...|+++|.++|+++|++|++|++|. .+..
T Consensus 142 ~~--~~~~d------~~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~-~~~~----- 207 (418)
T PLN02242 142 IT--TTFVD------ITDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFA-PMVL----- 207 (418)
T ss_pred ce--EEEcC------CCCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCC-ccCC-----
Confidence 43 33322 238999999886535899999888776 56799999999999999999999984 3221
Q ss_pred CCCC-CCcEEEECCCccCccc--c-EEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gp--r-gG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.+.+ ++|++++|++|++.|+ + ||++++++ ++.+++..
T Consensus 208 ~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~------~li~~l~~ 248 (418)
T PLN02242 208 SPARLGADVVVHSISKFISGGADIIAGAVCGPA------ELVNSMMD 248 (418)
T ss_pred CHHHcCCcEEEEeCccccCCCCCceEEEEEcCH------HHHHHHHH
Confidence 3334 7899999999998654 3 79998876 46555543
No 112
>PLN02483 serine palmitoyltransferase
Probab=99.74 E-value=1.7e-16 Score=164.10 Aligned_cols=232 Identities=21% Similarity=0.194 Sum_probs=145.6
Q ss_pred hccccccCCCCC-----cHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC
Q 016668 103 KSLELIASENFT-----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (385)
Q Consensus 103 ~~l~Liasen~~-----s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s 176 (385)
..+++ +|.||. ++.+.++....+ .+|.-+..++|...| .+.++++| +.+++++|.+. .|.+++
T Consensus 101 ~~~n~-~s~~YLgl~~~~~~~~~~~~~ai-~~~g~~~~~sr~~~g~~~~~~ele----~~lA~~~g~~~-----ai~~~~ 169 (489)
T PLN02483 101 RCLNL-GSYNYLGFAAADEYCTPRVIESL-KKYSASTCSSRVDGGTTKLHRELE----ELVARFVGKPA-----AIVFGM 169 (489)
T ss_pred eEEEe-ecCCccCcCCCCHHHHHHHHHHH-HHhCCCCCccccccCCcHHHHHHH----HHHHHHhCCCc-----EEEECC
Confidence 34544 566664 233333333332 234444556664334 45455555 46889999765 467789
Q ss_pred cHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh------c
Q 016668 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------F 250 (385)
Q Consensus 177 Gs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~------~ 250 (385)
|+.+|..++.++++|||.|++.++.|.+... .+...|..+..++ . .|++++++.+++ .
T Consensus 170 G~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~--------~~~~~Ga~v~~~~--~------~d~~~le~~l~~~i~~~~p 233 (489)
T PLN02483 170 GYATNSTIIPALIGKGGLIISDSLNHNSIVN--------GARGSGATIRVFQ--H------NTPSHLEEVLREQIAEGQP 233 (489)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcchhhHHHHH--------HHHHcCCeEEEEe--C------CCHHHHHHHHHhhhhcccc
Confidence 9999999999999999999999887655321 3456676555443 3 255666665532 1
Q ss_pred C---C--cEEEEcCCC---CCCCCCHHHHHHHHHHcCcEEEEeccccccccc-cCc--cc-CCC--CCCcEEEECCCccC
Q 016668 251 R---P--KLIIAGASA---YPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV--VA-DPF--KYCDVVTTTTHKSL 316 (385)
Q Consensus 251 ~---p--klIi~~~s~---~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~--~~-~p~--~gaDiv~~S~hK~l 316 (385)
+ | |++++..+. .|...++++|.++|+++|++|++|++|..|... .|. .. ..+ .+.||+++|+||+|
T Consensus 234 ~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~ 313 (489)
T PLN02483 234 RTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSF 313 (489)
T ss_pred ccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhc
Confidence 1 1 544443332 345679999999999999999999999765432 111 10 111 25789999999998
Q ss_pred ccccEEEEEEeCCCCchhHHHHHHhhccCCCcc-CCChHHHHHHHHHHHHHhh
Q 016668 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 317 ~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~q-g~p~~~~iaala~Al~e~~ 368 (385)
|+.||++++++ ++.+.+......... ++..+..+++...+++.+.
T Consensus 314 -g~~GG~i~~~~------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~ 359 (489)
T PLN02483 314 -GSCGGYIAGSK------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVIL 359 (489)
T ss_pred -ccCceEEEcCH------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHH
Confidence 56889999887 677777654322222 2344455555566676544
No 113
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=5.2e-17 Score=163.32 Aligned_cols=174 Identities=21% Similarity=0.247 Sum_probs=127.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
|.+.|| +++..+.||+ ++++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++..... .
T Consensus 44 ~~Y~R~--~~pt~~~L~~----~lA~l~g~~~-----~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~--~- 109 (386)
T PRK08045 44 HDYSRR--GNPTRDVVQR----ALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLF--D- 109 (386)
T ss_pred ceeeCC--CCccHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHH--H-
Confidence 444444 5666667765 6888898653 466788889999999999999999999998876532210 0
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
......+. ++.. ++ ..|++++++.+++ ++|+|+++.++|| ...|+++|.++|+++|+++++|+++..+
T Consensus 110 -~~~~~~gi--~v~~--vd----~~d~e~l~~~l~~-~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~ 179 (386)
T PRK08045 110 -SLAKRGCY--RVLF--VD----QGDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSP 179 (386)
T ss_pred -HHHhhCCe--EEEE--eC----CCCHHHHHHhccc-CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 01111222 2222 22 3689999998865 7899999888876 5789999999999999999999998655
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
.. +.|++ ++|+++.|+||++.|+. +|+++++++ ++.+++.
T Consensus 180 ~~-----~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~-----~~~~~l~ 223 (386)
T PRK08045 180 AL-----QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDP-----DVVTELA 223 (386)
T ss_pred cc-----CCchhhCCCEEEeecceeccCCCCceeEEEEeCcH-----HHHHHHH
Confidence 32 35666 89999999999998886 688877654 5666554
No 114
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.74 E-value=1.6e-16 Score=160.33 Aligned_cols=215 Identities=18% Similarity=0.219 Sum_probs=146.7
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccccccccc
Q 016668 140 YGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 140 ~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
|.|.+...+||+ .++++||.++ .|.++||+.|+..++...++|||+| +++. |+... ...+..
T Consensus 67 yag~~s~~~lE~----~va~~~G~~~-----av~v~sGT~Al~ll~~l~l~pGDeV--psn~---~f~Tt----~ahIe~ 128 (450)
T TIGR02618 67 YAGSRNFYHLER----TVRELYGFKY-----VVPTHQGRGAENLLSQIAIKPGDYV--PGNM---YFTTT----RYHQEK 128 (450)
T ss_pred hcCCCcHHHHHH----HHHHHHCCCe-----EEEcCCHHHHHHHHHHhCCCCcCEE--CCce---eHHHH----HHHHHh
Confidence 566666778886 5788999997 4778899999777766669999988 3332 21110 011344
Q ss_pred CcceEEEEecc------c-cCCCCCCCHHHHHHHhhhcC---CcEEEEcCCCC---CCC---CCHHHHHHHHHHcCcEEE
Q 016668 220 TSIYFESMPYR------L-DESTGLVDYDMLEKTAILFR---PKLIIAGASAY---PRD---FDYPRMRQIADAVGALLM 283 (385)
Q Consensus 220 ~g~~~~~i~~~------~-~~~~~~iD~d~le~~i~~~~---pklIi~~~s~~---~~~---~dl~~I~~ia~~~ga~li 283 (385)
.|..+.-++.+ + ++.++.+|+++|++.+++.. .++|.+..+++ |.+ .++++|.++|+++|+.|+
T Consensus 129 ~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi 208 (450)
T TIGR02618 129 NGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVF 208 (450)
T ss_pred CCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEE
Confidence 55422222111 1 24568999999999997532 23443332322 444 468999999999999999
Q ss_pred Eeccccccc---c---ccCcccCC--------CCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhc--cCCC
Q 016668 284 MDMAHISGL---V---AASVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA--VFPG 347 (385)
Q Consensus 284 vD~ah~~Gl---i---~~g~~~~p--------~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~--~fp~ 347 (385)
.|+||..|- + ..|....+ +.++|.+++|+||...+|.||+|+.+++ ++.++++.. .+.|
T Consensus 209 ~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~-----~l~~k~r~~~~~~eG 283 (450)
T TIGR02618 209 YDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDD-----EMFQSAKELVVVFEG 283 (450)
T ss_pred EEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCH-----HHHHHHHHHhhhcCC
Confidence 999998752 2 01222222 2389999999999999999999998887 888888766 4555
Q ss_pred c--cCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 348 L--QGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 348 ~--qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
+ .|+..-..+.|++++|.|+..+.|.+|+.
T Consensus 284 ~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~ 315 (450)
T TIGR02618 284 MPSYGGLAGRDMEAMAIGIREAVDYEYIEHRV 315 (450)
T ss_pred ccccCchhhhhHHHHHHHHHHhhhHHHHHHHH
Confidence 3 24445568899999999998876655543
No 115
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=3.9e-17 Score=166.47 Aligned_cols=191 Identities=17% Similarity=0.145 Sum_probs=133.4
Q ss_pred ccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHH
Q 016668 108 IASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA 187 (385)
Q Consensus 108 iasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~a 187 (385)
..+.++..+.+.++.... ... ..+|-..|+ +++..+.+|+ ++++++|.++ .|.++||+.|+.+++.+
T Consensus 37 ~~sstf~~~~~~~~~~~~-~~~-~~~~~Y~r~--~~pt~~~le~----~la~l~g~~~-----~v~fsSG~~Ai~~al~~ 103 (437)
T PRK05613 37 YQTTSYVFDSAEHAKQRF-ALE-DLGPIYSRL--TNPTVEALEN----RIASLEGGVH-----AVAFASGQAAETAAILN 103 (437)
T ss_pred eCCCCcccCCHHHHHHhh-ccc-cCCceeeCc--cChHHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHHHH
Confidence 344555555555543311 111 123444443 6777777765 6889999865 57899999999999999
Q ss_pred hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CC
Q 016668 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (385)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~ 265 (385)
++++||+|++++..|++..... ...+...|..+.+++ ++ .|++++++.+++ ++|+|++..+.++ ..
T Consensus 104 ll~~Gd~VI~~~~~y~~t~~~~----~~~l~~~Gi~v~~vd---~~----~d~e~l~~~l~~-~tk~V~~e~~~Np~~~v 171 (437)
T PRK05613 104 LAGAGDHIVTSPRLYGGTETLF----LVTLNRLGIEVTFVE---NP----DDPESWQAAVQP-NTKAFFGETFANPQADV 171 (437)
T ss_pred hcCCCCEEEECCCccHHHHHHH----HHHHHhcCeEEEEEC---CC----CCHHHHHHhCCc-cCeEEEEECCCCCCCcc
Confidence 9999999999988887652110 012234565444332 21 288999999865 6888887655544 57
Q ss_pred CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
.|+++|+++|+++|+++++|++|+.|.. ..+++ |+|++++|+||++.|+. ||+++.++
T Consensus 172 ~di~~I~~la~~~gi~livD~t~a~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~ 233 (437)
T PRK05613 172 LDIPAVAEVAHRNQVPLIVDNTIATAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLIDGG 233 (437)
T ss_pred cCHHHHHHHHHHcCCeEEEECCCccccc-----cChHHhCCCEEEeeccceecCCCcceeEEEEecC
Confidence 8999999999999999999999976543 34566 89999999999987753 57777543
No 116
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.74 E-value=4e-17 Score=162.90 Aligned_cols=172 Identities=19% Similarity=0.254 Sum_probs=126.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|.+.|+ +++..++||+ ++++++|.++ .+.+.||+.|+.+++ .+++|||+|+++.+.+|+... ++.
T Consensus 45 ~~~Y~R~--~~p~~~~le~----~lA~leg~~~-----~v~~~sG~aAi~~~l-~~l~~GD~VI~~~~~yg~~~~--~~~ 110 (364)
T PRK07269 45 GFDYTRT--KNPTRAKLEE----TLAAIESADY-----ALATSSGMSAIVLAF-SVFPVGSKVVAVRDLYGGSFR--WFN 110 (364)
T ss_pred CcceeCC--CCccHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHH-HHhCCCCEEEEecCCcCchHH--HHH
Confidence 4445554 6677778876 5788888876 366788999999888 578999999999887765432 100
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
.....+ .+. + ++.+|++++++.+++ ++|+|+++.++|| ...|+++|+++|+++|+++++|++++.
T Consensus 111 ---~~~~~~-~~~-----~---~~~~d~~~l~~~i~~-~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~ 177 (364)
T PRK07269 111 ---QQEKEG-RFH-----F---TYANTEEELIAAIEE-DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS 177 (364)
T ss_pred ---HHHhcC-cEE-----E---EecCCHHHHHHhcCc-CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 000011 111 1 124689999999865 7899999988886 457999999999999999999999765
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
++. ..|++ ++|++++|+||++.|+- ||+|+++++ ++.+++.
T Consensus 178 ~~~-----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~-----~l~~~~~ 222 (364)
T PRK07269 178 PIY-----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDL-----ELYEKLF 222 (364)
T ss_pred ccc-----CCchhhCCcEEEecCceeccCCCcccceEEEeCcH-----HHHHHHH
Confidence 532 35677 89999999999998864 799888775 6666664
No 117
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=6.4e-17 Score=163.08 Aligned_cols=176 Identities=19% Similarity=0.112 Sum_probs=130.4
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|.+.|+ |++..++||+ ++++++|.+. .+.+.||+.|+..++.++++|||+|+++++.|++......
T Consensus 56 ~~~Y~r~--~~pt~~~Le~----~lA~l~g~~~-----~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~-- 122 (394)
T PRK07050 56 QWRYGLH--ATPTSLALAQ----RLAEIEGGRH-----ALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGE-- 122 (394)
T ss_pred CcccCCC--CCHHHHHHHH----HHHHHhCCCe-----EEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHH--
Confidence 3445554 7787777776 5888999865 3567888999999999999999999999988765432100
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
......|..+. .++. .|.+++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..
T Consensus 123 --~~~~~~Gi~v~--~vd~------~~~~~l~~~i~~-~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~ 191 (394)
T PRK07050 123 --WLARDFGITVR--FYDP------LIGAGIADLIQP-NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSA 191 (394)
T ss_pred --HHHHhcCeEEE--EECC------CCHHHHHHhcCC-CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccc
Confidence 01234565433 3322 145788888865 7899999888776 567999999999999999999999977
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
|.. ..|++ |+|+++.|++|++.|. .||+++++++ ++.+++..
T Consensus 192 ~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~-----~~~~~~~~ 237 (394)
T PRK07050 192 GLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADA-----ELHAKLKL 237 (394)
T ss_pred ccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCH-----HHHHHHHH
Confidence 653 34555 8999999999999654 3788888765 67676654
No 118
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.74 E-value=4.6e-17 Score=163.36 Aligned_cols=174 Identities=18% Similarity=0.197 Sum_probs=127.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|...|+ |++..+.||+ ++++++|.+. .+.++||+.|+.+++ ++++|||+|+++++.|++.....
T Consensus 41 ~~~y~r~--~~p~~~~Le~----~la~l~g~~~-----al~~~SG~~Al~~~l-~~l~pGd~Vi~~~~~y~~t~~~~--- 105 (380)
T PRK06176 41 GYEYSRS--GNPTRFALEE----LIADLEGGVK-----GFAFASGLAGIHAVF-SLFQSGDHVLLGDDVYGGTFRLF--- 105 (380)
T ss_pred CCcccCC--CChhHHHHHH----HHHHHhCCCC-----EEEECCHHHHHHHHH-HHcCCCCEEEEcCCChhHHHHHH---
Confidence 4555554 6777777776 5888999876 367899999988655 67899999999998776543210
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
...+...|. ++..++ ..|++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|+++..
T Consensus 106 -~~~~~~~gi--~v~~vd------~~d~e~l~~ai~~-~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~ 175 (380)
T PRK06176 106 -DKVLVKNGL--SCTIID------TSDLSQIKKAIKP-NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT 175 (380)
T ss_pred -HHHHHhcCe--EEEEcC------CCCHHHHHHhcCc-CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc
Confidence 011233454 333322 2489999998865 7899998877766 578999999999999999999999865
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
+.. ..|++ ++|++++|+||++.||. ||+++++++ ++.+++.
T Consensus 176 ~~~-----~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~-----~~~~~~~ 220 (380)
T PRK06176 176 PYY-----QNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNE-----ALAQEIA 220 (380)
T ss_pred ccc-----CCccccCCCEEEecCceeccCCccceeeEEEecHH-----HHHHHHH
Confidence 432 24556 89999999999998874 788888765 5555543
No 119
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.73 E-value=8.3e-16 Score=154.12 Aligned_cols=242 Identities=13% Similarity=0.099 Sum_probs=154.1
Q ss_pred cchhhhhcccCChHHHHHHHHHHHHhhhccccccC--CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHH
Q 016668 76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (385)
Q Consensus 76 ~~~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Lias--en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~ 153 (385)
++++++++......++..+.+........++|-.+ +-.+++.+++++...+.+.. ..|+. ..|.+ ++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~G~~---~lr~~i 75 (384)
T PRK06348 3 NKFLAKKYQQMEVNIMAEIATLAKKFPDIIDLSLGDPDLITDESIINAAFEDAKKGH-TRYTD---SGGDV---ELIEEI 75 (384)
T ss_pred chHHHHHHhcCCccHHHHHHHHHHhcCCcEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCcH---HHHHHH
Confidence 34556667666666665554433222233555432 33345677665544433221 23443 22443 677777
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++++.+.+|...+ . -+|..++|+ .|+..++.++++|||+|++.+|.|.++.. .+...|..+ ++++.+
T Consensus 76 a~~~~~~~~~~~~-~-~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~--~~~~~~ 143 (384)
T PRK06348 76 IKYYSKNYDLSFK-R-NEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKD--------QIEMVGGKP--IILETY 143 (384)
T ss_pred HHHHHHHhCCCCC-h-hhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCEE--EEecCC
Confidence 7788777765421 1 245566665 59999999999999999999987765432 234556543 444443
Q ss_pred C-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCCC
Q 016668 233 E-STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFKY 304 (385)
Q Consensus 233 ~-~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~g 304 (385)
+ +++.+|++++++.++. ++|+|+++.++||+ .. ++++|.++|+++|++|++|+++ .++...+..+. .+.+
T Consensus 144 ~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~ 221 (384)
T PRK06348 144 EEDGFQINVKKLEALITS-KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVY-DGFSFYEDFVPMATLAG 221 (384)
T ss_pred cCcCCcCCHHHHHHhhCc-CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEeccc-ccceeCCCccchhhcCC
Confidence 2 3457999999998854 78999888788774 33 4788899999999999999996 55554332211 1221
Q ss_pred -C--cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhcc
Q 016668 305 -C--DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV 344 (385)
Q Consensus 305 -a--Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~ 344 (385)
. .+++.|++|++ +|.|.|++++++ ++.+.+....
T Consensus 222 ~~~~vi~~~SfSK~~~l~GlRiG~~v~~~------~~~~~~~~~~ 260 (384)
T PRK06348 222 MPERTITFGSFSKDFAMTGWRIGYVIAPD------YIIETAKIIN 260 (384)
T ss_pred CcCcEEEEecchhccCCccccceeeecCH------HHHHHHHHHH
Confidence 2 26789999996 688999999986 5766665443
No 120
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=7.1e-17 Score=162.96 Aligned_cols=167 Identities=22% Similarity=0.279 Sum_probs=125.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++.... + . ..+...|
T Consensus 62 ~~p~~~~le~----~lA~l~g~~~-----~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~-~-~--~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFEE----KVRILEGAEA-----ATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKI-F-T--EFLPRMG 128 (398)
T ss_pred CChHHHHHHH----HHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH-H-H--HHHhhCC
Confidence 6677777775 6888999876 47789999999999999999999999999877653210 0 0 0123445
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
.. +..+ + ..|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..++. .
T Consensus 129 i~--v~~v--d----~~d~e~l~~~i~~-~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~-----~ 194 (398)
T PRK08249 129 VD--VTLC--E----TGDHEQIEAEIAK-GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPIN-----Q 194 (398)
T ss_pred eE--EEEc--C----CCCHHHHHHhcCC-CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 43 3332 2 3689999999865 7899999877766 578999999999999999999999865432 2
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
.++. ++|+++.|+||++.|+. ||++++++ ++.+++.
T Consensus 195 ~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~------~l~~~l~ 234 (398)
T PRK08249 195 NPLALGADLVIHSATKFLSGHADALGGVVCGSK------ELMEQVY 234 (398)
T ss_pred CchhhCCCEEeccCceecCCCCCceEEEEECCH------HHHHHHH
Confidence 3445 89999999999997753 57777755 5666554
No 121
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.73 E-value=5.6e-16 Score=157.94 Aligned_cols=196 Identities=14% Similarity=0.042 Sum_probs=135.0
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhcc
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILK 190 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~ 190 (385)
-.+++.+.+++...+......+|+. ..|.+ ++++.+++++.+.+|.+.+ + -+|..++| ++|+..++.++++
T Consensus 68 ~~~~~~~~~a~~~al~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~~~~~~-~-~~v~it~G~~~al~l~~~~l~~ 139 (430)
T PLN00145 68 FRTAPEAEDAVAAALRSGKYNSYST---CVGLL---PARRAIAEYLSRDLPYELS-T-DDIYLTAGCAQAIEIIMSVLAQ 139 (430)
T ss_pred CCCCHHHHHHHHHHHHcCcCCCCCC---CccCH---HHHHHHHHHHhhccCCCCC-h-hhEEEeCCHHHHHHHHHHHhcC
Confidence 4568899999988775433334543 22444 6777777777666565432 1 24555665 5699999999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
|||+|++++|.|..+.. ...+.|..+..++ +.+ +++.+|++++++++++ ++++|++.+++|| ...+
T Consensus 140 ~Gd~Vlv~~P~y~~y~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~P~NPtG~v~~ 208 (430)
T PLN00145 140 PGANILLPRPGYPLYEA--------RAVFSGLEVRHFD--LLPERGWEVDLEGVEALADE-NTVAMVIINPNNPCGSVYS 208 (430)
T ss_pred CCCEEEEcCCCCccHHH--------HHHHcCCEEEEee--CCcccCCcCCHHHHHHHhCc-CceEEEEeCCCCCCCCCCC
Confidence 99999999986654321 2345566554444 332 3568999999998865 6788888777876 3454
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCC-c-EEEECCCccC--ccccEEEEEEe
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC-D-VVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~ga-D-iv~~S~hK~l--~GprgG~I~~~ 327 (385)
+++|.++|+++|+++|+|+++ ..+.+.+....++ ... . +++.|++|++ +|+|.||++..
T Consensus 209 ~~~l~~i~~~a~~~~i~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~ 277 (430)
T PLN00145 209 YEHLAKIAETARKLGILVIADEVY-DHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIATC 277 (430)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccc-hhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEEEe
Confidence 788889999999999999996 5565543211222 222 2 6789999994 89999999974
No 122
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.73 E-value=1.3e-15 Score=153.20 Aligned_cols=208 Identities=21% Similarity=0.188 Sum_probs=141.0
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAIL 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all 189 (385)
+..+++.+.+++...+...+. .|+. ..|. .++++.+++++.+.+|...... .+|..++| ++|+..++.+++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~Y~~---~~g~---~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~~ 112 (391)
T PRK07309 41 DFTTPDHVKEAAKRAIDANQS-HYTG---MAGL---LELRQAAADFVKEKYNLDYAPE-NEILVTIGATEALSASLTAIL 112 (391)
T ss_pred CCCCCHHHHHHHHHHHhcCCC-CCCC---CCCc---HHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHhc
Confidence 334477888888766543221 2332 2243 3788888888887777642110 13555555 579999999999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--C
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--D 265 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~~--~ 265 (385)
+|||+|++.+|.|+++.. .+...|..+. .++.+++++.+|++++++.++.. ++|+|+++.++||+ .
T Consensus 113 ~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~--~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~ 182 (391)
T PRK07309 113 EPGDKVLLPAPAYPGYEP--------IVNLVGAEIV--EIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVT 182 (391)
T ss_pred CCCCEEEEeCCCCcchHH--------HHHHcCCEEE--EEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcC
Confidence 999999999987765421 2345666544 44455445579999999988642 57899887777763 3
Q ss_pred C---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCC-C-CCc--EEEECCCccC--ccccEEEEEEeCCCCchhHH
Q 016668 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVEL 336 (385)
Q Consensus 266 ~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~-~-gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~ 336 (385)
. ++++|.++|+++|+++++|+++ ..+...+....++ . ..+ +++.|++|++ +|.|.|++++++ ++
T Consensus 183 ~s~~~~~~l~~~~~~~~~~ii~D~~y-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~------~~ 255 (391)
T PRK07309 183 YSREQIKALADVLKKYDIFVISDEVY-SELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA------EF 255 (391)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEEccc-cceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCH------HH
Confidence 3 4889999999999999999997 4555433221122 1 123 7889999997 788999999987 56
Q ss_pred HHHHhhc
Q 016668 337 ESAINNA 343 (385)
Q Consensus 337 ~~~i~~~ 343 (385)
.+++...
T Consensus 256 ~~~~~~~ 262 (391)
T PRK07309 256 TAQLIKS 262 (391)
T ss_pred HHHHHHH
Confidence 6666543
No 123
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.73 E-value=7e-16 Score=160.73 Aligned_cols=225 Identities=19% Similarity=0.103 Sum_probs=151.8
Q ss_pred hhhhcccCChHHHHHHHHHHHHhh-hc---cccccC-C----CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQF-KS---LELIAS-E----NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDEL 149 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~-~~---l~Lias-e----n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~l 149 (385)
.++++..+.+++...+.++..+.. .+ ++|-.+ + -.+|+.+++++...+.. ..+|+. ..|.+ ++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~--~~~Y~~---~~G~~---~l 190 (517)
T PRK13355 119 KSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD--TEGYSD---SKGLF---SA 190 (517)
T ss_pred hhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc--CCCCCC---CcChH---HH
Confidence 578888888887765555444432 33 444331 2 23588899998776542 234554 23443 67
Q ss_pred HHHHHHHHHHHcC--CCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEE
Q 016668 150 ETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (385)
Q Consensus 150 e~~~~~~la~lfg--~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (385)
++.+.+++.+..+ ++.+ +|.+++|+ +++..++.++++|||+|++++|.|..+.. .+...|..+
T Consensus 191 Reaia~~~~~~~~~~~~~~----~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~--------~~~~~g~~~-- 256 (517)
T PRK13355 191 RKAIMQYAQLKGLPNVDVD----DIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTA--------CVNLAGGTA-- 256 (517)
T ss_pred HHHHHHHHHhcCCCCCChh----HEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHH--------HHHHCCCEE--
Confidence 7666666655443 4443 56777776 58889999999999999999987654321 234566644
Q ss_pred EeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCc-cc
Q 016668 227 MPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VA 299 (385)
Q Consensus 227 i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~ 299 (385)
++++++++ ++.+|++++++.+.. ++|+|+++.|+||+ ..+ +++|.++|+++|++||+|+++ ..+++.+. ++
T Consensus 257 v~~~~~~~~~~~~d~~~l~~~~~~-~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y-~~~~~~~~~~~ 334 (517)
T PRK13355 257 VHYRCDEQSEWYPDIDDIRSKITS-RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIY-DRLVMDGLEHT 334 (517)
T ss_pred EEeecCcccCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhh-hhhcCCCCCcc
Confidence 44445544 468999999998864 78999888888873 455 788999999999999999996 45655442 22
Q ss_pred CCCC-CCc---EEEECCCccC--ccccEEEEEEe
Q 016668 300 DPFK-YCD---VVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 300 ~p~~-gaD---iv~~S~hK~l--~GprgG~I~~~ 327 (385)
+... ..| +++.|++|++ +|+|.||++..
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~ 368 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILS 368 (517)
T ss_pred cHHHhCCCCeEEEEecchhhccCcccceEEEEee
Confidence 2222 223 3358999995 89999999864
No 124
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.73 E-value=5.7e-17 Score=165.20 Aligned_cols=165 Identities=21% Similarity=0.238 Sum_probs=123.6
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|.++|+ +++.++++|+ ++++++|.++ .+.+.||+.|+..++.+++++||+|++++.+|++.... +
T Consensus 55 ~~~y~R~--~~p~~~~le~----~lA~l~g~~~-----av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~--~- 120 (433)
T PRK08134 55 GHVYSRI--SNPTVAVLEE----RVAALEGGVG-----AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNL--L- 120 (433)
T ss_pred CceeecC--cChHHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHH--H-
Confidence 3444443 6677777775 5889999887 37789999999999999999999999998877653210 0
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
. ..+...|.. +..++++ |++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|++|..
T Consensus 121 ~-~~l~~~Gi~--v~~vd~~------d~~~l~~~i~~-~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~ 190 (433)
T PRK08134 121 H-YTLRRFGIE--TTFVKPG------DIDGWRAAIRP-NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTT 190 (433)
T ss_pred H-HHHhhCCeE--EEEECCC------CHHHHHHhcCC-CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcc
Confidence 0 012234554 3343232 89999999975 7899988776665 678999999999999999999999977
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEE
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~ 326 (385)
+.. +.|++ |+|++++|.||++.|+. ||+++.
T Consensus 191 ~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 191 PYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred ccc-----CCchhcCCCEEEeccccccCCCCCceEEEEEe
Confidence 754 34667 89999999999987664 355553
No 125
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.73 E-value=1.9e-16 Score=159.99 Aligned_cols=245 Identities=15% Similarity=0.096 Sum_probs=149.3
Q ss_pred cccc-cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 105 LELI-ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 105 l~Li-asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
+.|- ++-.++++.|.+++...+.. +..+....++.+..... .+.+..+ .+ +++|+++++ .+++.|+|.++..
T Consensus 29 iyld~~a~g~~p~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~-~~-~l~g~~~~~---v~~~~~~t~~l~~ 101 (406)
T TIGR01814 29 IYLDGNSLGLMPKAARNALKEELDK-WAKIAIRGHNTGKAPWF-TLDESLL-KL-RLVGAKEDE---VVVMNTLTINLHL 101 (406)
T ss_pred EEecCCCcCcCcHHHHHHHHHHHHH-HHHhhhccCccCCCChh-hhhhhhc-cc-cccCCCCCc---EEEeCCchHHHHH
Confidence 4444 45557799999998866543 32221111111111111 2222222 34 899998752 2445556778888
Q ss_pred HHHHhccCCC---EEeecCCCCCccccCCccccccccccCcceEE--EEeccccCCCCCCCHHHHHHHhhh--cCCcEEE
Q 016668 184 VYTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--SMPYRLDESTGLVDYDMLEKTAIL--FRPKLII 256 (385)
Q Consensus 184 a~~all~pGD---~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~--~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi 256 (385)
++.++++||| .|++.+.+|++.. +.+. ..+...|..+. .+.++.+ +++.+|++++++.++. .++++|+
T Consensus 102 ~~~~~~~~~~~~~~i~~~~~~~~s~~-~~~~---~~~~~~g~~~~~~~~~~~~~-~~g~~~~~~l~~~~~~~~~~t~lv~ 176 (406)
T TIGR01814 102 LLASFYKPTPKRYKILLEAKAFPSDH-YAIE---SQLQLHGLTVEESMVQIEPR-EEETLRLEDILDTIEKNGDDIAVIL 176 (406)
T ss_pred HHHHhcCCcCCccEEEecCCCCChHH-HHHH---HHHHhcCCCcccceEEeccC-CCCccCHHHHHHHHHhcCCCeEEEE
Confidence 8888887753 5776666554321 1110 01233455441 1232232 3467899999988752 3678887
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccEEEEEEeCCCCc
Q 016668 257 AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPVL 332 (385)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~GprgG~I~~~~~~~~ 332 (385)
+...+ +|...|+++|.++|+++|+++++|++|+.|.+ +-.++ ++|++++|+||||.||.||+++..++
T Consensus 177 ~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~-----~id~~~~gvD~~~~s~hK~l~g~pG~~l~v~~~--- 248 (406)
T TIGR01814 177 LSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNV-----PLDLHDWGVDFACWCTYKYLNAGPGAGAFVHEK--- 248 (406)
T ss_pred EeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCc-----ccccccCCCCEEEEcCccccCCCCCeEEEEehh---
Confidence 76543 46888999999999999999999999988754 22232 79999999999997666766665543
Q ss_pred hhHHHHHHhhc-----------cC-----------CCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 333 GVELESAINNA-----------VF-----------PGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 333 ~~~~~~~i~~~-----------~f-----------p~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
.+. .+... .| ....|+|+...++++..|++.+...+.
T Consensus 249 --~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~ 307 (406)
T TIGR01814 249 --HAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGM 307 (406)
T ss_pred --hhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCH
Confidence 111 11000 00 001367899999999999988765443
No 126
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.73 E-value=1.8e-16 Score=161.62 Aligned_cols=236 Identities=19% Similarity=0.171 Sum_probs=161.8
Q ss_pred cccccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH
Q 016668 105 LELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (385)
Q Consensus 105 l~Liasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G~~-~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~ 179 (385)
+-.++|++|+ +|.++++....+ .+|..|..++|...|+. ..+++|+ .+++++|.+. .+.++||..
T Consensus 104 ~l~FsSndYLGL~~~p~v~~a~~~ai-~~yG~g~~gSrl~~G~~~~h~~LE~----~LA~f~g~e~-----all~sSGy~ 173 (476)
T PLN02955 104 LLLFSGNDYLGLSSHPTISNAAANAA-KEYGMGPKGSALICGYTTYHRLLES----SLADLKKKED-----CLVCPTGFA 173 (476)
T ss_pred EEEeeccCccCCCCCHHHHHHHHHHH-HHcCCCCCCcCccccChHHHHHHHH----HHHHHHCCCc-----EEEECChHH
Confidence 4446899997 899999988765 57877888888888864 4455665 6899999987 367899999
Q ss_pred HHHHHHHHhc--------------cCCCEEeecCCCCCccccCCccccccccccCcc--eEEEEeccccCCCCCCCHHHH
Q 016668 180 ANFEVYTAIL--------------KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--YFESMPYRLDESTGLVDYDML 243 (385)
Q Consensus 180 A~~~a~~all--------------~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~--~~~~i~~~~~~~~~~iD~d~l 243 (385)
||..++.+|. +++|.|+.....|.+-. ..+.+... ..+++.|+ +.|+++|
T Consensus 174 AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~--------dG~~ls~~~~~a~~~~f~------HND~~~L 239 (476)
T PLN02955 174 ANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASII--------DGVRLAERQGNVEVFVYR------HCDMYHL 239 (476)
T ss_pred HHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHH--------HHHHhccccCCceEEEeC------CCCHHHH
Confidence 9999998873 45667776655443211 12222210 12344443 4599999
Q ss_pred HHHhhhcC--CcEEEEcC--CCCCCCCCHHHHHHHHHHcCcEEEEecccccccccc---Cccc-CCC-CCCcEEEECCCc
Q 016668 244 EKTAILFR--PKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SVVA-DPF-KYCDVVTTTTHK 314 (385)
Q Consensus 244 e~~i~~~~--pklIi~~~--s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~---g~~~-~p~-~gaDiv~~S~hK 314 (385)
+++++..+ .++|+++. +..+...|+++|.++|+++|++|++|++|+.|.... |... ..+ ...|++++|+.|
T Consensus 240 e~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 240 NSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred HHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 99886432 34666653 334667889999999999999999999998887653 2111 111 256799999999
Q ss_pred cCccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCC-hHHHHHHHHHHHHHhhCch
Q 016668 315 SLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGP-HNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 315 ~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p-~~~~iaala~Al~e~~~~~ 371 (385)
.+ |-+||+|++++ ++.+.+.....+.+.++. .+...++...+++.+..+.
T Consensus 320 A~-G~~GGfi~gs~------~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~ 370 (476)
T PLN02955 320 AA-GCHGGFIACSK------KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEK 370 (476)
T ss_pred ch-hccCceeecHH------HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCH
Confidence 86 67899999988 577777654444444443 3445555566776665543
No 127
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.73 E-value=7.1e-16 Score=154.87 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=150.9
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
++++..+....+..+.+........++|-..++ .+++.+++++...+.... .+|.. ..|.+ ++++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~---~~g~~---~lr~~ia~~~ 83 (391)
T PRK08361 11 AGRINLIQRSKIRELFERASKMENVISLGIGEPDFDTPKNIKEAAKRALDEGW-THYTP---NAGIP---ELREAIAEYY 83 (391)
T ss_pred hHHHHhCCccHHHHHHHHHHhhcCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCcH---HHHHHHHHHH
Confidence 455555555444443333222223455553333 346888888877654322 12322 12444 7877777788
Q ss_pred HHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-C
Q 016668 158 LAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-T 235 (385)
Q Consensus 158 a~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~ 235 (385)
.+.+|...+. -+|.+++| ++|+..++.++++|||+|++++|.|.++.. .+...|..+..++ ++++ +
T Consensus 84 ~~~~g~~~~~--~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~ 151 (391)
T PRK08361 84 KKFYGVDVDV--DNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVE--------DAKIAEAKPIRIP--LREENE 151 (391)
T ss_pred HHHhCCCCCc--ccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHHcCCEEEEEe--cCCccC
Confidence 7777753211 13445555 569999999999999999999987654321 3345666544444 5543 4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCc-ccCCC--C-CCc
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPF--K-YCD 306 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~--~-gaD 306 (385)
+.+|++++++.++. ++++|++..++|| ...+ +++|.++|+++++++++|+++. .+...+. .+... + ..+
T Consensus 152 ~~~d~~~l~~~i~~-~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~ 229 (391)
T PRK08361 152 FQPDPDELLELITK-RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYE-HFLYEGAKHYPMIKYAPDNT 229 (391)
T ss_pred CCCCHHHHHHhccc-ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccc-cceeCCCCCCCHhhcCCCCE
Confidence 57999999998865 6888888777765 5566 7889999999999999999974 4443321 11111 1 235
Q ss_pred EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 307 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+++.|++|++ +|.|.|++++++ ++.+.+..
T Consensus 230 i~~~s~SK~~~~~GlRiG~~~~~~------~~~~~~~~ 261 (391)
T PRK08361 230 ILANSFSKTFAMTGWRLGFVIAPE------QVIKDMIK 261 (391)
T ss_pred EEEecCchhcCCcHhhhhhhccCH------HHHHHHHH
Confidence 7889999997 567889999976 46555543
No 128
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=6.8e-17 Score=163.02 Aligned_cols=157 Identities=17% Similarity=0.179 Sum_probs=122.2
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|.+.|+ |+++++.||+ +++++.|.++ .+.++||+.|+..++.++++|||+|++.++.|++|....
T Consensus 38 ~~~Y~r~--g~p~~~~lE~----~la~leg~~~-----~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~--- 103 (397)
T PRK05939 38 GFTYARQ--GTPTTAALEA----KITKMEGGVG-----TVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLF--- 103 (397)
T ss_pred CCCcCCC--CCHHHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHH---
Confidence 3444443 8898888886 5788999987 467889999999999999999999999998887764321
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
..+...|..+..++ . .|++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|+++++|++|..
T Consensus 104 --~~l~~~G~~v~~v~--~------~d~e~l~~~l~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 104 --GTLRGLGVEVTMVD--A------TDVQNVAAAIRP-NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred --HHHHhcCCEEEEEC--C------CCHHHHHHhCCC-CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccc
Confidence 12334565444332 2 489999999865 7999998877665 567999999999999999999999876
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCccc
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP 319 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gp 319 (385)
+.. ..+.+ ++|+++.|+||++.|+
T Consensus 173 ~~~-----~~~~~~gaDivv~S~sK~~~g~ 197 (397)
T PRK05939 173 PWL-----FRPKDVGASLVINSLSKYIAGH 197 (397)
T ss_pred ccc-----cCccccCCEEEEecCeecccCC
Confidence 643 24555 8999999999999764
No 129
>PLN02187 rooty/superroot1
Probab=99.73 E-value=7.6e-16 Score=158.34 Aligned_cols=195 Identities=11% Similarity=0.061 Sum_probs=133.6
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceeecCCcH-HHHHHHHHHhc
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS-PANFEVYTAIL 189 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~~~sGs-~A~~~a~~all 189 (385)
.+++.+.+++...+......+|.. ..|.+ ++++.+++++.+.+|. +++ +|..++|+ +|+..++.+++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lR~aiA~~~~~~~~~~~~~~----~I~it~G~~~al~~~~~~l~ 152 (462)
T PLN02187 83 RTCIEAEDAVVDVLRSGKGNSYGP---GAGIL---PARRAVADYMNRDLPHKLTPE----DIFLTAGCNQGIEIVFESLA 152 (462)
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCC---CCChH---HHHHHHHHHHHHhcCCCCCcc----cEEEeCCHHHHHHHHHHHhc
Confidence 346788888887665332223322 22433 6777777777666654 443 46666665 69999999999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
+|||+|++++|.|.++.. .+...|..+..+++. ..+++.+|++++++.++. ++++|+++.|+|| ..++
T Consensus 153 ~pGd~Vlv~~P~y~~y~~--------~~~~~g~~~~~~~l~-~~~~~~~d~~~l~~~~~~-~~~~v~i~nP~NPTG~v~s 222 (462)
T PLN02187 153 RPNANILLPRPGFPHYDA--------RAAYSGLEVRKFDLL-PEKEWEIDLEGIEAIADE-NTVAMVVINPNNPCGNVYS 222 (462)
T ss_pred CCCCEEEEeCCCCccHHH--------HHHHcCCEEEEEeCc-cccCCccCHHHHHHhcCC-CcEEEEEeCCCCCCCCccC
Confidence 999999999997765421 234567655555432 123568999999998854 6788888777777 3444
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCc-EEEECCCccC--ccccEEEEEEeC
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaD-iv~~S~hK~l--~GprgG~I~~~~ 328 (385)
+++|.++|+++|++||+|++| ..+++.+....++. ... +++.|++|++ +|+|.||+++.+
T Consensus 223 ~e~l~~i~~~a~~~~i~iI~DE~Y-~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~ 292 (462)
T PLN02187 223 HDHLKKVAETARKLGIMVISDEVY-DRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALND 292 (462)
T ss_pred HHHHHHHHHHHHHCCCEEEEeccc-cccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecC
Confidence 788999999999999999996 56665442222222 112 5789999995 899999999854
No 130
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.73 E-value=1.4e-16 Score=159.97 Aligned_cols=169 Identities=23% Similarity=0.269 Sum_probs=124.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++|+ ++++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|++...... ......+
T Consensus 49 ~~p~~~~le~----~lA~l~g~~~-----v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~----~~~~~~~ 115 (382)
T TIGR02080 49 GNPTRDLLQQ----ALAELEGGAG-----AVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLN----ALAKKGC 115 (382)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHH----HHHhhcC
Confidence 6676777776 5788888643 3566778889999999999999999999988875432100 0011222
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
. ++.. ++ ..|++++++.+++ ++|+|+++.++|| ...|+++|.++|+++|+++++|++|..+.. .
T Consensus 116 ~--~v~~--~d----~~d~~~l~~ai~~-~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 181 (382)
T TIGR02080 116 F--RVLF--VD----QGDEQALRAALAQ-KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPAL-----Q 181 (382)
T ss_pred e--EEEE--EC----CCCHHHHHHhcCc-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 2 2222 12 2488999999865 7899999888776 568999999999999999999999866542 2
Q ss_pred CCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.|+. ++|++++|+||++.|+ ++|+++++++ ++.+++..
T Consensus 182 ~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~-----~~~~~l~~ 223 (382)
T TIGR02080 182 NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDP-----QVAEELAW 223 (382)
T ss_pred CchhhCCCEEEeecceeccCCCCceeEEEEeCCH-----HHHHHHHH
Confidence 4555 8999999999999775 4788888765 66666643
No 131
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=5e-16 Score=153.86 Aligned_cols=200 Identities=14% Similarity=0.120 Sum_probs=138.1
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAIL 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all 189 (385)
+-.+|+.+++++.+.+......+|+. +...+++ +.++++++++.+ +|.+++|+. ++..++.+++
T Consensus 33 ~~~~p~~~~~a~~~~~~~~~~~~y~~-------~~~~~lr----~~ia~~~~~~~~----~i~it~G~~~~l~~~~~~l~ 97 (351)
T PRK14807 33 PFELPEEVIKNIQEIVKSSQVNIYPD-------PTAEKLR----EELARYCSVVPT----NIFVGNGSDEIIHLIMLAFI 97 (351)
T ss_pred CCCCCHHHHHHHHHHhhcCcccCCCC-------ccHHHHH----HHHHHHhCCCcc----cEEEecCHHHHHHHHHHHhc
Confidence 33468999999876654222223332 1122444 457778898764 566777765 7888889999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
+|||+|++.+|.+.++.. .....|..+. +++++ +++.+|++++++.++..++|+|+++.++|| ...+
T Consensus 98 ~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~--~v~~~-~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~ 166 (351)
T PRK14807 98 NKGDVVIYPHPSFAMYSV--------YSKIAGAVEI--PVKLK-EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIE 166 (351)
T ss_pred CCCCEEEEeCCChHHHHH--------HHHHcCCeEE--EeecC-CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCC
Confidence 999999999887654321 2345666444 44454 346799999999986557899988877775 5788
Q ss_pred HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CC-cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC-DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 268 l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-ga-Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
.+++.++|++++.++++|++|. ++. +...+..++ .. -+++.|++|++ +|.|.|++++++ ++.+.+...
T Consensus 167 ~~~l~~l~~~~~~~~ivDe~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~------~~~~~~~~~ 238 (351)
T PRK14807 167 REDIIKIIEKSRGIVVVDEAYF-EFY-GNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANE------NILKYLNLV 238 (351)
T ss_pred HHHHHHHHHhCCCEEEEeCcch-hhc-ccchHHHhhhCCCEEEEecchHhcccchhceeeeecCH------HHHHHHHHc
Confidence 9999999999899999999973 442 221222222 22 27889999997 788999999876 677777654
Q ss_pred c
Q 016668 344 V 344 (385)
Q Consensus 344 ~ 344 (385)
.
T Consensus 239 ~ 239 (351)
T PRK14807 239 K 239 (351)
T ss_pred c
Confidence 3
No 132
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.1e-16 Score=161.23 Aligned_cols=169 Identities=20% Similarity=0.237 Sum_probs=126.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++|+ ++++++|.+. .+.++||+.|+..++. ++++||+|+++++.|++...... ..+...|
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~----~~~~~~G 117 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK-----GFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMIT----EVLSRFG 117 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC-----eEEECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHH----HHHHHcC
Confidence 5676777775 6889999885 3667999999887775 88999999999988875432100 1223456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+..++ + .|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|+++..+.. .
T Consensus 118 ~~v~~v~--~------~d~~~l~~~l~~-~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~-----~ 183 (390)
T PRK08064 118 IEHTFVD--M------TNLEEVAQNIKP-NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLL-----Q 183 (390)
T ss_pred CEEEEEC--C------CCHHHHHHhcCC-CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccc-----c
Confidence 6544443 2 278999998865 7899999888765 678999999999999999999999865432 2
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhhc
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
.+++ ++|+++.|+||++.|+. +|+++++++ ++.+++...
T Consensus 184 ~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~-----~~~~~l~~~ 226 (390)
T PRK08064 184 KPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDE-----ELAQKLYFL 226 (390)
T ss_pred CchhhCCcEEEeecceeccCCccceeEEEEeCCH-----HHHHHHHHH
Confidence 3455 89999999999998876 488887764 566666544
No 133
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.72 E-value=6.3e-16 Score=159.68 Aligned_cols=198 Identities=19% Similarity=0.202 Sum_probs=136.2
Q ss_pred cCCCCCcHHHHHHHhhHhh-ccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHH--
Q 016668 109 ASENFTSRAVMEAVGSCLT-NKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY-- 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~-~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~-- 185 (385)
.+++.++|.+.+++.+... ..| +.|.......|. .++....++++++++|++. +.+..++|+.+....+
T Consensus 77 ~~~~~~~p~i~~~~~~~~~~~~~-tpYq~e~~sqG~---lel~~~~~~~la~l~G~~~----~~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 77 SCTMKYNPKINEKVARLPGFAEL-HPLQPEETVQGA---LELMYELQEWLKEITGMDA----VTLQPAAGAHGELTGLLM 148 (481)
T ss_pred ccCCCCCHHHHHHHHhCcchhcC-CCCCChhhhhHH---HHHHHHHHHHHHHHhCCCc----eEEEeCcHHHHHHHHHHH
Confidence 5778889999999876411 112 123211112233 2566668899999999985 4677777876555432
Q ss_pred -H-HhccCCC----EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 186 -T-AILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 186 -~-all~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
. .++++|| +|+++++.|+.+.. .+...|..+..++ ++ +++.+|++++++.+.+ ++++|++.+
T Consensus 149 ~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~--------~~~~~G~~vv~v~--~~-~~~~~D~e~L~~~i~~-~t~~V~v~~ 216 (481)
T PRK04366 149 IRAYHEARGDTKRTEVIVPDSAHGTNPA--------SAAMAGFKVVEIP--SN-EDGLVDLEALKAAVGE-DTAALMLTN 216 (481)
T ss_pred HHHHhhccCcCCCCEEEEcCCccHhHHH--------HHHHcCCEEEEee--cC-CCCCcCHHHHHhhccc-CCeEEEEeC
Confidence 2 3467887 99999887655432 2345676655555 44 3578999999999865 688887766
Q ss_pred CC-CCCC-CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCcccc------EEEEEEeCC
Q 016668 260 SA-YPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR------GGMIFFKKD 329 (385)
Q Consensus 260 s~-~~~~-~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr------gG~I~~~~~ 329 (385)
++ +|.. .|+++|+++|+++|+++++|++|..++. +.. .+-+ |+|++++++||+|.+|. +|+++++++
T Consensus 217 Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~--g~~-~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~ 292 (481)
T PRK04366 217 PNTLGLFERNILEIAEIVHEAGGLLYYDGANLNAIL--GKA-RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE 292 (481)
T ss_pred CCCccccchHHHHHHHHHHHcCCEEEEEecChhhhc--ccC-CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh
Confidence 65 3444 4899999999999999999999976643 222 3444 89999999999986553 467888764
No 134
>PRK08363 alanine aminotransferase; Validated
Probab=99.72 E-value=9e-16 Score=154.48 Aligned_cols=193 Identities=18% Similarity=0.122 Sum_probs=130.8
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKP 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~p 191 (385)
.+++.+.+++.+.+.... ..|+. ..|.+ ++++...+++.+.+|..-+. -+|.+++| +.|+..++.++++|
T Consensus 46 ~p~~~~~~~~~~~~~~~~-~~Y~~---~~g~~---~lr~~ia~~~~~~~g~~~~~--~~i~it~G~~~al~~~~~~~~~~ 116 (398)
T PRK08363 46 QPPEHMKEAYCRAIKEGH-NYYGP---SEGLP---ELREAIVKREKRKNGVDITP--DDVRVTAAVTEALQLIFGALLDP 116 (398)
T ss_pred CCCHHHHHHHHHHHHcCC-CCCCC---CCCcH---HHHHHHHHHHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHhCCC
Confidence 478899999887664321 12322 12333 67777777777766743211 14556666 56999999999999
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEec-cccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC-
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD- 267 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d- 267 (385)
||+|++.+|.|.++.. .+...|.. .+.+ ..+++++.+|++++++.+.. ++|+|++..++||+ ..+
T Consensus 117 gd~Vl~~~p~y~~~~~--------~~~~~g~~--~v~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~p~NPtG~~~~~ 185 (398)
T PRK08363 117 GDEILIPGPSYPPYTG--------LVKFYGGV--PVEYRTIEEEGWQPDIDDIRKKITE-KTKAIAVINPNNPTGALYEK 185 (398)
T ss_pred CCEEEEcCCCCcchHH--------HHHHcCCE--EEEeccccccCCcCCHHHHHhhCCc-ceEEEEEECCCCCCCcCcCH
Confidence 9999999987765432 23345543 3333 34444557999999998864 68988887777763 444
Q ss_pred --HHHHHHHHHHcCcEEEEeccccccccccCcccCC--CCCC-c-EEEECCCccC--ccccEEEEEE
Q 016668 268 --YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FKYC-D-VVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 268 --l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p--~~ga-D-iv~~S~hK~l--~GprgG~I~~ 326 (385)
+++|.++|+++|+++++|+++. .+.+.+...+. +... . +++.|++|++ +|.|.|++++
T Consensus 186 ~~~~~l~~~a~~~~~~li~Deay~-~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 186 KTLKEILDIAGEHDLPVISDEIYD-LMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred HHHHHHHHHHHHcCeEEEEhhhhh-hhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEE
Confidence 8899999999999999999974 44443322211 1222 2 5688999995 7889999997
No 135
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.72 E-value=3.1e-16 Score=171.06 Aligned_cols=242 Identities=17% Similarity=0.132 Sum_probs=152.9
Q ss_pred cCCCCCcH-HHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC-cHHHHHHHHH
Q 016668 109 ASENFTSR-AVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYT 186 (385)
Q Consensus 109 asen~~s~-~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~ 186 (385)
++..+.++ .|.+++...+.+.+ ++|++.+..+....+.+++ ++++++++||+++.++ +|.+++ +|.|+..+..
T Consensus 41 Aatt~~~~~~V~~~~~~~~~~~~--~np~s~~~~s~~~~~~~e~-aR~~ia~~lga~~~~~--~VvFtsnaT~alnlva~ 115 (805)
T PLN02724 41 AGATLYSESQLEAALADFSSNVY--GNPHSQSDSSMRSSDTIES-ARQQVLEYFNAPPSDY--ACVFTSGATAALKLVGE 115 (805)
T ss_pred CCCCCCCHHHHHHHHHHHHhhcc--CCCCcCcchhhhHHHHHHH-HHHHHHHHhCCCccce--EEEEeCChHHHHHHHHH
Confidence 44445455 44554444444333 4555434445444555554 8999999999976432 345554 5679998888
Q ss_pred Hh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-----CCCCCCH--HHHHHHhh---------h
Q 016668 187 AI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-----STGLVDY--DMLEKTAI---------L 249 (385)
Q Consensus 187 al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-----~~~~iD~--d~le~~i~---------~ 249 (385)
++ +++||+|++...+|.+.+. + +..+...|..+..++.+.+. +.+.+|. +++++.++ .
T Consensus 116 ~l~~~~gd~Iv~t~~eH~svl~--~---~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~ 190 (805)
T PLN02724 116 TFPWSSESHFCYTLENHNSVLG--I---REYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDG 190 (805)
T ss_pred HCCCCCCCeEEEeeccccchHH--H---HHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccC
Confidence 88 8999999998777655431 1 11223456666665543111 2234444 66766531 1
Q ss_pred cCCcEEEEcCC--CCCCCCCHHHHHHHHHHc--------CcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCc
Q 016668 250 FRPKLIIAGAS--AYPRDFDYPRMRQIADAV--------GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLR 317 (385)
Q Consensus 250 ~~pklIi~~~s--~~~~~~dl~~I~~ia~~~--------ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~ 317 (385)
.++++|++... .+|...|++.|.++++.. ++++++|++|++|.. +-.+. ++|++++|+||++.
T Consensus 191 ~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~-----piDv~~~~~Dfl~~S~HK~~G 265 (805)
T PLN02724 191 EAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTS-----PPDLSRYPADFVVVSFYKIFG 265 (805)
T ss_pred CCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCC-----CCChhhcCCCEEEEecceecc
Confidence 24578877543 357889999876665543 368999999988754 22333 79999999999987
Q ss_pred cccE-EEEEEeCCCCchhHHHHHHhhccC-----------------------CCccCCChHHHHHHHHHHHHHhhCch
Q 016668 318 GPRG-GMIFFKKDPVLGVELESAINNAVF-----------------------PGLQGGPHNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 318 Gprg-G~I~~~~~~~~~~~~~~~i~~~~f-----------------------p~~qg~p~~~~iaala~Al~e~~~~~ 371 (385)
||.| |+++.+++ +.+.+....+ -...|+++...+++++.|++.+..-+
T Consensus 266 gP~G~G~L~vr~~------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig 337 (805)
T PLN02724 266 YPTGLGALLVRRD------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLT 337 (805)
T ss_pred CCCCceEEEEehh------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhC
Confidence 7997 88888874 3333321111 11346888999999999998775533
No 136
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.72 E-value=1.3e-16 Score=159.35 Aligned_cols=174 Identities=21% Similarity=0.253 Sum_probs=128.2
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
||...|| +++..++||+ .+++++|.+. .+.+.||+.|+..++ ++++|||+|++.++.|++.... +
T Consensus 43 ~~~y~r~--~~pt~~~le~----~la~l~g~~~-----~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~-~-- 107 (366)
T PRK08247 43 GFDYSRT--GNPTRGVLEQ----AIADLEGGDQ-----GFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRL-F-- 107 (366)
T ss_pred CccccCC--CCchHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHH-H--
Confidence 4555554 6777777776 5889999986 367889999988765 6889999999999877653211 0
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
...+...|..+. .++. .|++++++.+++ ++|+|+++.|++|. ..|+++|.++|+++|+++++|+++..
T Consensus 108 -~~~~~~~G~~v~--~vd~------~d~~~l~~~i~~-~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~ 177 (366)
T PRK08247 108 -EEHWKKWNVRFV--YVNT------ASLKAIEQAITP-NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYT 177 (366)
T ss_pred -HHHhhccCceEE--EECC------CCHHHHHHhccc-CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc
Confidence 012234565433 3222 489999998865 78999998888873 46899999999999999999999855
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~ 341 (385)
++. ..|++ ++|++++|++|++.|+ .+|+++++++ ++.+++.
T Consensus 178 ~~~-----~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-----~l~~~~~ 222 (366)
T PRK08247 178 PVL-----QRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQ-----ELCERLA 222 (366)
T ss_pred ccc-----cCchhcCCcEEEeecceeccCCCceeeeEEecChH-----HHHHHHH
Confidence 432 23455 7999999999999876 6798888754 5656554
No 137
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.72 E-value=8e-16 Score=156.54 Aligned_cols=200 Identities=10% Similarity=0.043 Sum_probs=138.9
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC-C-CCCcceeecCCcHHHHHHHHHHh
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-E-NKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~-~-~~~~~~V~~~sGs~A~~~a~~al 188 (385)
.+++.|.+.+.+.+.+...+ ++|.+ .|.. . ++|+.+++|+++++|++ . ++. ..+.+++||+||+.++.+.
T Consensus 50 tt~~~p~~~~~~~~~l~~~~--~np~s---~~~~-~-~le~~~~~~la~llg~~~~~~~~-~g~~TsGgTEAn~~al~~a 121 (431)
T TIGR01788 50 TTWMEPEARKLMDETINKNM--IDKDE---YPQT-A-EIENRCVNMLADLWHAPAKDAEA-VGTSTIGSSEAIMLGGLAM 121 (431)
T ss_pred CCCCCHHHHHHHHHHHhcCC--CCccc---CccH-H-HHHHHHHHHHHHHhCCCCCCCCC-eEEEechHHHHHHHHHHHH
Confidence 46678889999988875433 45543 2333 2 78889999999999998 2 222 2234577889999888665
Q ss_pred cc--------CC-----CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEE
Q 016668 189 LK--------PH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (385)
Q Consensus 189 l~--------pG-----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklI 255 (385)
.+ .| -+|++++.+| .+.. +.+...|..+..++ ++++++.+|+++|++.+++ ++.+|
T Consensus 122 r~~~~~~~~~~g~~~~~~~ii~s~~~H---~sv~-----ka~~~lg~~v~~i~--~d~~~~~vd~~~L~~~i~~-~t~lV 190 (431)
T TIGR01788 122 KWRWRKRMEAAGKPTDKPNLVMGSNVQ---VCWE-----KFARYFDVELREVP--MDPGRYVIDPEQVVEAVDE-NTIGV 190 (431)
T ss_pred HHHHHHHHHhcCCCCCCcEEEEcCcch---HHHH-----HHHHHcCceeEEEe--cCCCceeeCHHHHHHHHhh-CCeEE
Confidence 31 12 2577766544 2211 23345565555555 6643458999999999965 57777
Q ss_pred EEc--CCCCCCCCCHHHHHHHHHHc------CcEEEEeccccccccc--cCcccCCC--CCCcEEEECCCccCccccE-E
Q 016668 256 IAG--ASAYPRDFDYPRMRQIADAV------GALLMMDMAHISGLVA--ASVVADPF--KYCDVVTTTTHKSLRGPRG-G 322 (385)
Q Consensus 256 i~~--~s~~~~~~dl~~I~~ia~~~------ga~livD~ah~~Gli~--~g~~~~p~--~gaDiv~~S~hK~l~Gprg-G 322 (385)
++. .+.++...|+++|+++|+++ |+++++|++|+.+... .+..+..+ .++|.++.|.||++.||.| |
T Consensus 191 ~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G 270 (431)
T TIGR01788 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLVYPGVG 270 (431)
T ss_pred EEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCCCCCcE
Confidence 654 44567889999999999999 9999999999744321 12223333 3899999999999889998 8
Q ss_pred EEEEeCC
Q 016668 323 MIFFKKD 329 (385)
Q Consensus 323 ~I~~~~~ 329 (385)
+++.+++
T Consensus 271 ~l~~r~~ 277 (431)
T TIGR01788 271 WVIWRDE 277 (431)
T ss_pred EEEEeCh
Confidence 8888874
No 138
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.72 E-value=5.7e-16 Score=156.11 Aligned_cols=231 Identities=23% Similarity=0.245 Sum_probs=151.6
Q ss_pred cccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 107 Liasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
...|++|. +|.|++++...+ ++|..+..++|...| .+...++| +.+++++|.+. .+.++||+.||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~-~~~~~~~~~s~~~~g~~~~~~~Le----~~la~~~g~~~-----~l~~~sG~~an 118 (402)
T TIGR01821 49 VWCSNDYLGMGQHPEVLQAMHETL-DKYGAGAGGTRNISGTNIPHVELE----AELADLHGKES-----ALVFTSGYVAN 118 (402)
T ss_pred EeEccCcCCCCCCHHHHHHHHHHH-HHcCCCCcchhhhhCCcHHHHHHH----HHHHHHhCCCe-----EEEECchHHHH
Confidence 45788886 899999998776 456556555654444 34344454 46889999754 47789999999
Q ss_pred HHHHHHhcc--CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEE
Q 016668 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (385)
Q Consensus 182 ~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi 256 (385)
..++..+.+ +||.|+.....|++... .+...|..+. .++ ..|++++++.++. .++++|+
T Consensus 119 ~~ai~~l~~~~~~~~v~~~~~~h~s~~~--------~~~~~g~~~~--~~~------~~d~~~l~~~l~~~~~~~~~~v~ 182 (402)
T TIGR01821 119 DATLATLAKIIPGCVIFSDELNHASMIE--------GIRHSGAEKF--IFR------HNDVAHLEKLLQSVDPNRPKIIA 182 (402)
T ss_pred HHHHHHhhCCCCCCEEEEcchHhHHHHH--------HHHHcCCeEE--EEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 999988865 78888776554432211 2234454322 222 2477888887753 2568888
Q ss_pred EcCCCC--CCCCCHHHHHHHHHHcCcEEEEecccccccccc-Cc-ccC--CC-CCCcEEEECCCccCccccEEEEEEeCC
Q 016668 257 AGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 257 ~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~~--p~-~gaDiv~~S~hK~l~GprgG~I~~~~~ 329 (385)
++++++ |...|+++|.++|+++|++|++|++|+.|+... |. ... .+ +..|+++.|++|.|+ ..||++++++
T Consensus 183 ~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g-~~GG~i~~~~- 260 (402)
T TIGR01821 183 FESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFG-VVGGYIAASR- 260 (402)
T ss_pred EcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhc-cCCceeecCH-
Confidence 877654 567899999999999999999999998776431 11 111 11 246889999999984 4668888876
Q ss_pred CCchhHHHHHHhhccCCC-ccCCChHHHHHHHHHHHHHhhCc
Q 016668 330 PVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 330 ~~~~~~~~~~i~~~~fp~-~qg~p~~~~iaala~Al~e~~~~ 370 (385)
++.+.+.....+. ..++.++..+++...+++.+.+.
T Consensus 261 -----~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~ 297 (402)
T TIGR01821 261 -----KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES 297 (402)
T ss_pred -----HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC
Confidence 5666665432221 22334444555656677665443
No 139
>PLN02368 alanine transaminase
Probab=99.72 E-value=5.1e-16 Score=157.15 Aligned_cols=177 Identities=12% Similarity=0.076 Sum_probs=124.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhc-cCCCEEeecCCCCCccccCCccccccccccCcceEE
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (385)
+|++.+.+++.+.+|.+.+ + -+|..++|+. |+..++.+++ +|||+|++++|.|..+.. .+...|..+
T Consensus 111 ~LR~aia~~~~~~~g~~~~-~-~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~--------~~~~~g~~~- 179 (407)
T PLN02368 111 GVRKEVAEFIERRDGYPSD-P-ELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSA--------TISLLGGTL- 179 (407)
T ss_pred HHHHHHHHHHHHhcCCCCC-h-hhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHH--------HHHHcCCEE-
Confidence 6888788888888885421 1 2566777765 9988999987 799999999997755432 345666644
Q ss_pred EEeccccCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccc
Q 016668 226 SMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVA 294 (385)
Q Consensus 226 ~i~~~~~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~ 294 (385)
++++++++ ++.+|++++++.++.. ++|+|+++.|+||+ .. .+++|.++|+++|++||+|+++ ..+++
T Consensus 180 -v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y-~~l~y 257 (407)
T PLN02368 180 -VPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVY-QQNIY 257 (407)
T ss_pred -EEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccc-ccccc
Confidence 44445543 4589999999988531 57888887788773 34 3678888999999999999996 56665
Q ss_pred cCc--ccCC------C----C-CCc-EEEECCCccC---ccccEEEEEE---eCCCCchhHHHHHHhhc
Q 016668 295 ASV--VADP------F----K-YCD-VVTTTTHKSL---RGPRGGMIFF---KKDPVLGVELESAINNA 343 (385)
Q Consensus 295 ~g~--~~~p------~----~-gaD-iv~~S~hK~l---~GprgG~I~~---~~~~~~~~~~~~~i~~~ 343 (385)
.+. +++. + + +.. |++.|++|+| +|+|.|+++. ++ ++.+.+...
T Consensus 258 ~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~------~li~~~~~~ 320 (407)
T PLN02368 258 QDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPP------KTVEEIYKV 320 (407)
T ss_pred CCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCH------HHHHHHHHH
Confidence 442 2221 1 1 112 5789999986 6999999985 44 566666554
No 140
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.72 E-value=8.3e-16 Score=155.10 Aligned_cols=230 Identities=22% Similarity=0.243 Sum_probs=148.2
Q ss_pred cccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 107 Liasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
.++|.||. +|.|++++...+. ++..+..++|.+.| .+...++| +.+++++|.+. .+.++||+.||
T Consensus 50 ~~~s~dylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~g~~~~~~~l~----~~la~~~g~~~-----~~~~~sG~~an 119 (407)
T PRK09064 50 VWCSNDYLGMGQHPKVIEAMIEALD-RCGAGAGGTRNISGTNHYHVELE----RELADLHGKEA-----ALVFTSGYVSN 119 (407)
T ss_pred EEECCCCcCCCCCHHHHHHHHHHHH-HcCCCCCCcCcCccCHHHHHHHH----HHHHHHhCCCc-----EEEECcHHHHH
Confidence 45788775 8999999987764 45545555554434 44444555 46788898643 47789999999
Q ss_pred HHHHHHhcc--CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEE
Q 016668 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (385)
Q Consensus 182 ~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi 256 (385)
..++..+.. ++|.|+.....|++.. ..+...+..+. .++ ..|++++++.++. .++++|+
T Consensus 120 ~~ai~~l~~~~~~~~i~~~~~~h~s~~--------~~~~~~~~~~~--~~~------~~d~~~le~~l~~~~~~~~~~v~ 183 (407)
T PRK09064 120 DATLSTLAKLIPDCVIFSDELNHASMI--------EGIRRSRCEKH--IFR------HNDVAHLEELLAAADPDRPKLIA 183 (407)
T ss_pred HHHHHHHhCCCCCCEEEEeCcchHHHH--------HHHHHcCCcEE--EEC------CCCHHHHHHHHHhccCCCCeEEE
Confidence 998888754 7877776654443221 12233443322 222 2478888888753 3578888
Q ss_pred EcCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccc-cCc-cc--CCC-CCCcEEEECCCccCccccEEEEEEeCC
Q 016668 257 AGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VA--DPF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 257 ~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~-~~--~p~-~gaDiv~~S~hK~l~GprgG~I~~~~~ 329 (385)
++++.+ |...|+++|.++|+++|++|++|++|+.|+.. .|. .. ..+ +..|+++.|++|.| |..||++++++
T Consensus 184 ~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~-g~~GG~~~~~~- 261 (407)
T PRK09064 184 FESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAF-GVMGGYIAGSA- 261 (407)
T ss_pred EeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhh-hccCceEecCH-
Confidence 876654 45679999999999999999999999877542 121 11 111 24589999999987 56789998876
Q ss_pred CCchhHHHHHHhhccCCCc-cCCChHHHHHHHHHHHHHhhC
Q 016668 330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 330 ~~~~~~~~~~i~~~~fp~~-qg~p~~~~iaala~Al~e~~~ 369 (385)
++.+.+.....+.. ..+.++...++...+++.+..
T Consensus 262 -----~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~ 297 (407)
T PRK09064 262 -----ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE 297 (407)
T ss_pred -----HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc
Confidence 56666644322221 223334445555567766544
No 141
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.72 E-value=2.1e-15 Score=152.28 Aligned_cols=207 Identities=19% Similarity=0.173 Sum_probs=136.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pG 192 (385)
+++.+.+++...+......+|+. ..|.+ .+++..++++.+.+|.+.+ +.-+|..++|+ +|+..++.++++||
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lR~~ia~~l~~~~~~~~~-~~~~I~it~G~~~al~~~~~~l~~~g 119 (403)
T PRK08636 47 TPQHIIDKLCESAQKPKTHGYSV---SKGIY---KLRLAICNWYKRKYNVDLD-PETEVVATMGSKEGYVHLVQAITNPG 119 (403)
T ss_pred CCHHHHHHHHHHhcCCccCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCeEEECCChHHHHHHHHHHhCCCC
Confidence 46667777655443222234544 23554 6777788888888886532 11146677776 49999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHH----HHHhhh--cCCcEEEEcCCCCCC--
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML----EKTAIL--FRPKLIIAGASAYPR-- 264 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~l----e~~i~~--~~pklIi~~~s~~~~-- 264 (385)
|.|++.+|.|.++.. .+...|..+..++.+.+ +++.+|++.+ ++.++. .++++|+++.|+||+
T Consensus 120 d~Vlv~~P~y~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~ 190 (403)
T PRK08636 120 DVAIVPDPAYPIHSQ--------AFILAGGNVHKMPLEYN-EDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTA 190 (403)
T ss_pred CEEEEcCCCCcchHH--------HHHhcCCEEEEEecccc-ccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCc
Confidence 999999997765432 23456765544443222 2357887754 555543 357888888778773
Q ss_pred CC---CHHHHHHHHHHcCcEEEEeccccccccccCc-ccCC--CCC-Cc--EEEECCCccC--ccccEEEEEEeCCCCch
Q 016668 265 DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FKY-CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 265 ~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p--~~g-aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~ 333 (385)
.. .+++|.++|++++++||+|+++ ..+.+.+. .++. ++. .| +++.|++|++ +|.|.|++++++
T Consensus 191 ~~s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~----- 264 (403)
T PRK08636 191 TVEKSFYERLVALAKKERFYIISDIAY-ADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNK----- 264 (403)
T ss_pred cCCHHHHHHHHHHHHHcCcEEEEeccc-hhhccCCCCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCH-----
Confidence 33 3678889999999999999996 45554432 1211 222 24 4578999997 789999999877
Q ss_pred hHHHHHHhhc
Q 016668 334 VELESAINNA 343 (385)
Q Consensus 334 ~~~~~~i~~~ 343 (385)
++.+.+...
T Consensus 265 -~li~~~~~~ 273 (403)
T PRK08636 265 -KLVGALKKI 273 (403)
T ss_pred -HHHHHHHHH
Confidence 566655443
No 142
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.72 E-value=1.6e-15 Score=150.21 Aligned_cols=206 Identities=14% Similarity=0.094 Sum_probs=139.7
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAIL 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all 189 (385)
+..+++.+.+++...... ...|+. ..|.+ ++++...+++.+.+|.+-+ ...+|.+++|+. |+..++.+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~-~~~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 11 KEPTPPFIRKALIDAVPE--VSQYPS---ALGTK---ALREAISGWFERRFGVKLD-PDAQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred CCCCCHHHHHHHHHHHhc--cCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCcEEEcCChHHHHHHHHHHHc
Confidence 334578888888765432 223443 23444 7788788888887785431 111567778764 9999999999
Q ss_pred cCC---CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-
Q 016668 190 KPH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR- 264 (385)
Q Consensus 190 ~pG---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~- 264 (385)
++| |+|++.+|.|.++.. .+...|..+ ++++++++ ...+|++++++++.+ ++|+|+++.++||+
T Consensus 82 ~~g~~~d~Vl~~~p~y~~~~~--------~~~~~g~~~--~~v~~~~~~~~~~d~~~l~~~~~~-~~~~i~i~~p~NPtG 150 (350)
T TIGR03537 82 DPEEDRRRVIFGTPGYPVYER--------GALFAGGEP--TAVKLKKEDGFLLRLEKVEKSILE-ETKIVWINYPHNPTG 150 (350)
T ss_pred CCCCCCceEEEcCCCCcchHH--------HHHhcCCEE--EEcccCcccCCccCHHHHHHhhhh-ccEEEEEeCCCCCcC
Confidence 988 699999986654432 345667654 44445533 346899999998865 78999888787763
Q ss_pred -CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc--EEEECCCccC--ccccEEEEEEeCCCCchhH
Q 016668 265 -DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 265 -~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~ 335 (385)
..+ +++|.++|+++|+++|+|+++. .+...+..++... ..| +++.|++|++ +|.|.|+++.++ +
T Consensus 151 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~------~ 223 (350)
T TIGR03537 151 ATAPRSYLKETIAMCREHGIILCSDECYT-EIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDE------K 223 (350)
T ss_pred cccCHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCH------H
Confidence 456 8889999999999999999974 3333322222122 223 6788999986 688999998766 5
Q ss_pred HHHHHhhc
Q 016668 336 LESAINNA 343 (385)
Q Consensus 336 ~~~~i~~~ 343 (385)
+.+++...
T Consensus 224 ~~~~~~~~ 231 (350)
T TIGR03537 224 LISFLRKL 231 (350)
T ss_pred HHHHHHHH
Confidence 66666543
No 143
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=2.1e-16 Score=158.45 Aligned_cols=174 Identities=19% Similarity=0.187 Sum_probs=126.3
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
|...|+ +++..++||+ .+++++|.+. .+.+.||+.|+..++ ++++|||+|+++++.|++.....
T Consensus 42 ~~y~r~--~~p~~~~Le~----~lA~l~g~~~-----~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~---- 105 (377)
T PRK07671 42 YEYSRT--GNPTRAALEE----LIAVLEGGHA-----GFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVM---- 105 (377)
T ss_pred CCcCCC--CChHHHHHHH----HHHHHhCCCc-----eEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHH----
Confidence 444444 6777777776 5889999876 366889998877654 68899999999998776432110
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
...+...|..+. .++ ..|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|+++..+
T Consensus 106 ~~~~~~~G~~v~--~v~------~~d~~~l~~ai~~-~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~ 176 (377)
T PRK07671 106 TKVLNRFGIEHT--FVD------TSNLEEVEEAIRP-NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTP 176 (377)
T ss_pred HHHHhcCCeEEE--EEC------CCCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCcc
Confidence 011233455433 322 2489999999865 7899999888776 5689999999999999999999998543
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhh
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.. ..|++ ++|++++|++|++.||. +|+++++++ ++.+++..
T Consensus 177 ~~-----~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~-----~l~~~~~~ 221 (377)
T PRK07671 177 YW-----QSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSP-----ELAEDLHF 221 (377)
T ss_pred cc-----CChhhhCCeEEEecCcccccCCccceeEEEEeCcH-----HHHHHHHH
Confidence 22 24556 88999999999998884 687877665 56665543
No 144
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.71 E-value=8.5e-16 Score=153.80 Aligned_cols=164 Identities=12% Similarity=0.074 Sum_probs=121.8
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
.++++++++|.+. .+.++||+.|+..++.++ ++|||+|+++++.|.+.. ..+...|.. ++.+++
T Consensus 36 ~e~~la~~~g~~~-----~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~--------~~~~~~G~~--~v~~d~ 100 (375)
T PRK11706 36 CQQWLEQRFGSAK-----VLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA--------NAFVLRGAK--IVFVDI 100 (375)
T ss_pred HHHHHHHHhCCCe-----EEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHH--------HHHHHcCCE--EEEEec
Confidence 3346888899975 356778888988877766 799999999998665432 134456764 445557
Q ss_pred cCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEE
Q 016668 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (385)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~ 310 (385)
+++++.+|++++++.+++ ++|+|++.. .++...|+++|.++|+++|+++|+|++|+.|....+. ++. ..|+.++
T Consensus 101 d~~~~~~d~~~le~~i~~-~tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~---~~g~~~~~~~~ 175 (375)
T PRK11706 101 RPDTMNIDETLIEAAITP-KTRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGR---ALGTIGHIGCF 175 (375)
T ss_pred CCCcCCcCHHHHHHhcCC-CCeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECccccccccCCe---eeecCcCEEEE
Confidence 766678999999999865 789887654 3677789999999999999999999999877543332 222 4688889
Q ss_pred CCC--ccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 311 TTH--KSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 311 S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
|+| |++....||+++++++ ++.+++.
T Consensus 176 Sf~~~K~l~~g~gG~~~~~~~-----~~~~~~~ 203 (375)
T PRK11706 176 SFHETKNYTAGEGGALLINDP-----ALIERAE 203 (375)
T ss_pred eCCCCccccccCCeEEEECCH-----HHHHHHH
Confidence 999 9986566777777765 5655443
No 145
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.71 E-value=1.9e-15 Score=151.98 Aligned_cols=233 Identities=15% Similarity=0.126 Sum_probs=150.6
Q ss_pred cccCChHHHHHHHHHHHHh-----hhccccccC--CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 83 LGEADPEVCEIITKEKERQ-----FKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 83 l~~~dp~~~~~i~~e~~~~-----~~~l~Lias--en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
+..+.++++..+.+..... +..++|-.+ +..+++.+.+++...+.. ...|+. ..|.+ ++++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~~Y~~---~~G~~---~lr~~ia~ 76 (396)
T PRK09147 5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFIKDALAANLDG--LASYPT---TAGLP---ALREAIAA 76 (396)
T ss_pred hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCCCCCCHHHHHHHHHHhhh--hcCCCC---CCCCH---HHHHHHHH
Confidence 3444554444444433322 233444333 334578888888766532 123443 23444 67777788
Q ss_pred HHHHHcCCC-CCCCcceeecCCcH-HHHHHHHHHhccC---CCEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 156 RALAAFNLD-ENKWGVNVQPLSGS-PANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 156 ~la~lfg~~-~~~~~~~V~~~sGs-~A~~~a~~all~p---GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
++.+.+|.+ .+ ...+|..++|+ +|+..++.++++| ||.|++++|.+.++.. .....|..+..++
T Consensus 77 ~~~~~~g~~~~~-~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~vp-- 145 (396)
T PRK09147 77 WLERRYGLPALD-PATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEG--------AALLAGAEPYFLN-- 145 (396)
T ss_pred HHHHHhCCCcCC-ccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHH--------HHHhcCCEEEEec--
Confidence 888888854 21 10146666765 5999999999999 9999999987654321 2345676544444
Q ss_pred ccCCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCccc--CCC
Q 016668 231 LDEST-GLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF 302 (385)
Q Consensus 231 ~~~~~-~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~ 302 (385)
+++++ +.+|++++++.+.. ++|+|+++.++||+ .+ ++++|.++|++++++||+|+++ ..+.+.+..+ ..+
T Consensus 146 ~~~~~~~~~d~~~l~~~~~~-~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~ 223 (396)
T PRK09147 146 CDPANNFAPDFDAVPAEVWA-RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECY-SEIYFDEAAPPLGLL 223 (396)
T ss_pred cCccccCccCHHHHHHHHhh-ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccc-cccccCCCCCCchhh
Confidence 55443 47999999887754 78999988888873 33 4788889999999999999997 4444433211 111
Q ss_pred ----C-C---Cc--EEEECCCcc--CccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 303 ----K-Y---CD--VVTTTTHKS--LRGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 303 ----~-g---aD--iv~~S~hK~--l~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
. + .| +++.|++|. ++|.|.|++++++ ++.+++..
T Consensus 224 ~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~------~l~~~~~~ 269 (396)
T PRK09147 224 EAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA------ALLKKFLL 269 (396)
T ss_pred hhccccCccccccEEEEeccccccCCccceeeeecCCH------HHHHHHHH
Confidence 0 1 13 788999996 5889999999887 56666654
No 146
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.71 E-value=2e-15 Score=150.98 Aligned_cols=230 Identities=16% Similarity=0.134 Sum_probs=144.9
Q ss_pred ccCChHHHHHHHHHHHHhh---hccccccCC--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 84 GEADPEVCEIITKEKERQF---KSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 84 ~~~dp~~~~~i~~e~~~~~---~~l~Liase--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
+.++|..|..++.-..++. +.++|-..+ ..+++.+++++...+.......|+. ..|. .++ +++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g~---~~l----r~~ia 76 (380)
T PRK06225 7 AKVPPSGFKTSNEFFDYVFKDKEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPP---PEGF---PEL----RELIL 76 (380)
T ss_pred cccCcchhhhHHHHHHHHhhcCCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCC---Ccch---HHH----HHHHH
Confidence 3455555555555333332 334444333 3568999999887765432223332 1122 233 45678
Q ss_pred HHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCC
Q 016668 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~i 238 (385)
+++|+++++ .+.+.+++.|+..++.+++++||+|++.+|.+..+. ..+...|..+..++...+++++.+
T Consensus 77 ~~l~~~~~~---v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~--------~~~~~~g~~~~~v~~~~~~~~~~~ 145 (380)
T PRK06225 77 KDLGLDDDE---ALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID--------NFASRFGAEVIEVPIYSEECNYKL 145 (380)
T ss_pred HhcCCCCCc---EEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH--------HHHHHhCceEEeeccccccCCccC
Confidence 889998741 234445567999999999999999999987653221 123456665444442212223579
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCccc-CCCC-CCcEEEEC
Q 016668 239 DYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK-YCDVVTTT 311 (385)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~p~~-gaDiv~~S 311 (385)
|++++++.+.. ++|+|++..++||+ .. ++++|.++|+++|+++|+|+++. ++.. +..+ ..++ ...+++.|
T Consensus 146 d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~-~~~~~~~~~~~~~i~~~s 222 (380)
T PRK06225 146 TPELVKENMDE-NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYR-DFAR-EHTLAAEYAPEHTVTSYS 222 (380)
T ss_pred CHHHHHhhcCC-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHH-HHhc-cCCchhhcCCCCEEEEee
Confidence 99999998865 68888776676653 33 58899999999999999999863 3321 1111 1112 23477889
Q ss_pred CCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 312 THKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 312 ~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
++|+| +|.|.|++++++ ++.+.+...
T Consensus 223 ~SK~~g~~G~RiG~i~~~~------~l~~~~~~~ 250 (380)
T PRK06225 223 FSKIFGMAGLRIGAVVATP------DLIEVVKSI 250 (380)
T ss_pred chhhcCCccceeEEEecCH------HHHHHHHHH
Confidence 99998 467889999976 566666543
No 147
>PRK06460 hypothetical protein; Provisional
Probab=99.71 E-value=2.9e-16 Score=157.38 Aligned_cols=169 Identities=19% Similarity=0.245 Sum_probs=120.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++|+ .+++++|.+. .+.++||+.|+..++.++++|||+|++.++.+++.... + ...+...|
T Consensus 43 ~~p~~~~L~~----~lA~l~g~~~-----~v~~~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~-~---~~~~~~~G 109 (376)
T PRK06460 43 ANPTVLELTK----KIVELENAEM-----GVAFSSGMGAISTTALALLKPGNSVLVHRDMFGRSYRF-F---TDYLKNWG 109 (376)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHH-H---HHHHHhhC
Confidence 5565666665 6889999976 35678999999999999999999999987665432210 0 01234556
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+..++ .+ |.+.+++.++ .++|+|+++.++|| ...|+++|.++|+++|+++++|++|..++. .
T Consensus 110 ~~v~~~~--~~------~~~~l~~~~~-~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~-----~ 175 (376)
T PRK06460 110 VNVDASN--PG------SDNIIEKAKS-KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPIN-----Q 175 (376)
T ss_pred cEEEEEC--CC------CHHHHHHhcC-CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCcccc-----C
Confidence 5544333 22 2344555443 47899999888876 578999999999999999999999864421 1
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhhc
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
.+++ ++|+++.|+||+|.|++ +|++++++ ++.+++...
T Consensus 176 ~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~------~l~~~l~~~ 217 (376)
T PRK06460 176 KPLELGADIVVHSASKFLAGHNDVIAGLAAGYG------KLLNVIDQM 217 (376)
T ss_pred ChhhcCCCEEEeecceeccCCCCceEEEEecCH------HHHHHHHHH
Confidence 3344 78999999999998875 79888876 566666543
No 148
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.71 E-value=3.3e-15 Score=149.74 Aligned_cols=238 Identities=17% Similarity=0.129 Sum_probs=151.4
Q ss_pred hhhcccCChHHHHHHHHHHHH-h---hhcccccc--CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKER-Q---FKSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~-~---~~~l~Lia--sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~ 153 (385)
++++..+++..+..+.+...+ + ..-++|-. +...+++.+.+++...+.+.. ..|+.. .| ...+++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~---~g---~~~lr~~i 77 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPDFDTPEHIKEAAIEALDDGK-TKYTPA---AG---IPELREAI 77 (393)
T ss_pred hhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCC-CCcCCC---CC---hHHHHHHH
Confidence 556666666654433322221 1 12233332 233446888888877765422 234331 23 34777777
Q ss_pred HHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++++.+.+|...+ . .++.+++| ++|+..++.+++++||+|++.+|.|+++.. .+...|..+..++ .+
T Consensus 78 a~~~~~~~~~~~~-~-~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~ 145 (393)
T PRK05764 78 AAKLKRDNGLDYD-P-SQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPE--------MVKLAGGVPVFVP--TG 145 (393)
T ss_pred HHHHHHHhCCCCC-H-HHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHH--------HHHHcCCEEEEEe--cC
Confidence 7777777665321 1 13445555 579999999999999999999987655421 2345566544444 54
Q ss_pred CC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcc-cC--CC-
Q 016668 233 ES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV-AD--PF- 302 (385)
Q Consensus 233 ~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~--p~- 302 (385)
++ ++.+|++++++.++. ++++|++..++||. .. ++++|.++|+++|+++++|++|. .+...+.. +. .+
T Consensus 146 ~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~ 223 (393)
T PRK05764 146 EENGFKLTVEQLEAAITP-KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYE-KLVYDGAEFTSIASLS 223 (393)
T ss_pred cccCCcCCHHHHHHhhCc-cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEecccc-ceeeCCCCcccHHHcC
Confidence 33 457999999998854 68888887777663 33 48899999999999999999974 44443321 11 11
Q ss_pred -C--CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhcc
Q 016668 303 -K--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAV 344 (385)
Q Consensus 303 -~--gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~ 344 (385)
+ +.++++.|++|++ +|+|.|++++++ ++.+.+....
T Consensus 224 ~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~------~~~~~~~~~~ 264 (393)
T PRK05764 224 PELRDRTITVNGFSKAYAMTGWRLGYAAGPK------ELIKAMSKLQ 264 (393)
T ss_pred CCCcCCEEEEecCcccccCccceeEEEecCH------HHHHHHHHHH
Confidence 2 2458899999986 677889999876 5666665443
No 149
>PLN02509 cystathionine beta-lyase
Probab=99.71 E-value=2.3e-16 Score=161.65 Aligned_cols=160 Identities=22% Similarity=0.249 Sum_probs=119.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
|++..+.+|+ ++++++|.+. .+.++||+.|+.+ +..+++|||+|+++++.|+++..... ..+...|
T Consensus 131 gnpt~~aLE~----~lA~leg~e~-----ai~~~SG~aAi~~-il~ll~~GD~VI~~~~~y~~t~~ll~----~~l~~~G 196 (464)
T PLN02509 131 GNPTRDALES----LLAKLDKADR-----AFCFTSGMAALSA-VTHLIKNGEEIVAGDDVYGGSDRLLS----QVVPRSG 196 (464)
T ss_pred CCHHHHHHHH----HHHHHhCCCE-----EEEeCcHHHHHHH-HHHHhCCCCEEEEcCCchhhHHHHHH----HHHHHCC
Confidence 7887777775 6788888765 3667889888754 44689999999999988766421000 0123445
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+. .++ ..|++++++.+.+ ++|+|+++.+++| ...|+++|+++|+++|+++++|++|+.++. .
T Consensus 197 ~~v~--~vd------~~d~e~l~~ai~~-~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-----~ 262 (464)
T PLN02509 197 VVVK--RVN------TTNLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVL-----S 262 (464)
T ss_pred eEEE--EeC------CCCHHHHHHhCCc-CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 5433 322 2478999998864 7899999887765 577999999999999999999999977653 2
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCC
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~ 329 (385)
.|++ ++|++++|++|++.|+. ||+++++++
T Consensus 263 ~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~ 296 (464)
T PLN02509 263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 296 (464)
T ss_pred ChhhcCCcEEEecCcccccCCCccceeEEEeccH
Confidence 4555 89999999999998864 688887765
No 150
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.71 E-value=6.4e-16 Score=156.25 Aligned_cols=229 Identities=20% Similarity=0.186 Sum_probs=148.4
Q ss_pred ccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHH
Q 016668 108 IASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (385)
Q Consensus 108 iasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G~-~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~ 182 (385)
..+++|. +|.|++++...+. ++..+..++|.+.|. +...+|| +++++++|.+. .+.++||+.||.
T Consensus 51 ~~sn~yl~l~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~Le----~~la~~~g~~~-----~i~~~sG~~a~~ 120 (410)
T PRK13392 51 WCSNDYLGMGQHPDVIGAMVDALD-RYGAGAGGTRNISGTSHPHVLLE----RELADLHGKES-----ALLFTSGYVSND 120 (410)
T ss_pred EECCCccCCCCCHHHHHHHHHHHH-HcCCCCchhhhcccChHHHHHHH----HHHHHHhCCCC-----EEEECcHHHHHH
Confidence 3566664 8999999987664 455454455544454 2344455 46889999754 577899999999
Q ss_pred HHHHHhc--cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEEE
Q 016668 183 EVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIA 257 (385)
Q Consensus 183 ~a~~all--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi~ 257 (385)
.++..+. .|||.|+.....|++.. ..+...|..+..++ . .|.+.+++.++. .++|+|++
T Consensus 121 ~~i~~l~~~~~g~~vi~~~~~h~s~~--------~~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~t~~v~i 184 (410)
T PRK13392 121 AALSTLGKLLPGCVILSDALNHASMI--------EGIRRSGAEKQVFR--H------NDLADLEEQLASVDPDRPKLIAF 184 (410)
T ss_pred HHHHHHhcCCCCCEEEEehhhhHHHH--------HHHHHcCCeEEEEe--C------CCHHHHHHHHHhccCCCCEEEEE
Confidence 9888775 48998887665554321 12345565443332 1 255566665532 36789988
Q ss_pred cCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccccccc-Cc-cc---CCCCCCcEEEECCCccCccccEEEEEEeCCC
Q 016668 258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA---DPFKYCDVVTTTTHKSLRGPRGGMIFFKKDP 330 (385)
Q Consensus 258 ~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~---~p~~gaDiv~~S~hK~l~GprgG~I~~~~~~ 330 (385)
++++++ ...|+++|.++|+++|+++++|++|..|+... |. .. ...+..|+++.|++|+|++ .||++++++
T Consensus 185 ~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~-~GG~~~~~~-- 261 (410)
T PRK13392 185 ESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGC-LGGYIAASA-- 261 (410)
T ss_pred eCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhc-ccchhhcCH--
Confidence 877654 57899999999999999999999998776421 11 11 1123568999999999854 468888776
Q ss_pred CchhHHHHHHhhccCCC-ccCCChHHHHHHHHHHHHHhhC
Q 016668 331 VLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 331 ~~~~~~~~~i~~~~fp~-~qg~p~~~~iaala~Al~e~~~ 369 (385)
++.+.+.+...+. ...+..+...++...+|+....
T Consensus 262 ----~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~ 297 (410)
T PRK13392 262 ----DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKT 297 (410)
T ss_pred ----HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhc
Confidence 5666655433221 1222333456666677876543
No 151
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.71 E-value=3.2e-16 Score=136.76 Aligned_cols=163 Identities=25% Similarity=0.266 Sum_probs=113.3
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++++++++|+.+.. + + ++..+||.|+..++.++.++||+|++.++.|.++.. . .....|..+..++ .+
T Consensus 5 ~~~~l~~~~~~~~~-~-~-~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~--~-----~~~~~g~~~~~v~--~~ 72 (170)
T cd01494 5 LEEKLARLLQPGND-K-A-VFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW--V-----AAELAGAKPVPVP--VD 72 (170)
T ss_pred HHHHHHHHcCCCCC-c-E-EEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh--h-----HHHhcCCEEEEec--cC
Confidence 45678999964432 2 3 345588899999999999999999999987766531 1 2334565444444 43
Q ss_pred CCCC-CCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEE
Q 016668 233 ESTG-LVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVT 309 (385)
Q Consensus 233 ~~~~-~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~ 309 (385)
..+. ..|.+.+++.....+|+++++..++++ ...|+++|.++|+++|+++++|++|..+....+.......++|+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~ 152 (170)
T cd01494 73 DAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVT 152 (170)
T ss_pred CCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEE
Confidence 2222 233346655554457889988776554 4568899999999999999999999766543221111223799999
Q ss_pred ECCCccCccccEEEEEEe
Q 016668 310 TTTHKSLRGPRGGMIFFK 327 (385)
Q Consensus 310 ~S~hK~l~GprgG~I~~~ 327 (385)
.|+||+|.+|++|+++++
T Consensus 153 ~s~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 153 FSLHKNLGGEGGGVVIVK 170 (170)
T ss_pred EEcccccCCCceEEEEeC
Confidence 999999988899999874
No 152
>PRK09148 aminotransferase; Validated
Probab=99.71 E-value=3e-15 Score=151.32 Aligned_cols=237 Identities=17% Similarity=0.132 Sum_probs=146.6
Q ss_pred hcccCChHHHHHHHHHHHHh----hhccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 82 SLGEADPEVCEIITKEKERQ----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 82 ~l~~~dp~~~~~i~~e~~~~----~~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
++..+.++++..+.+..... ...++|-.++. .+++.+.+++.+.+.+....+|+. ..|.+ ++++..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~ 79 (405)
T PRK09148 6 RIRRLPPYVFEQVNRLKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSA---SKGIP---GLRRAQAA 79 (405)
T ss_pred hhhcCCccHHHHHHHHHHHHHhcCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCC---CCCCH---HHHHHHHH
Confidence 44555666565554433322 12345543332 346888888776654322234543 23544 67777777
Q ss_pred HHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC
Q 016668 156 RALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (385)
Q Consensus 156 ~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~ 234 (385)
++.+.+|.+-+ +.-+|..++|+ +|+..++.++++|||+|++.+|.|.++.. .....|..+..++ ++.+
T Consensus 80 ~~~~~~g~~~~-~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~~--------~~~~~g~~v~~v~--~~~~ 148 (405)
T PRK09148 80 YYARRFGVKLN-PDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHAF--------GFIMAGGVIRSVP--AEPD 148 (405)
T ss_pred HHHHHhCCCCC-CCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHH--------HHHhcCCEEEEEe--CCCC
Confidence 88777786421 11146667776 59999999999999999999997765422 2245576554444 4433
Q ss_pred C-CCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCc-ccCC--CCC-
Q 016668 235 T-GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FKY- 304 (385)
Q Consensus 235 ~-~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p--~~g- 304 (385)
+ +..+++++.+... .++++|+++.|+|| ...+ +++|.++|+++|+++|+|+++ ..+.+.+. .++. +++
T Consensus 149 ~~~~~~l~~~~~~~~-~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~s~~~~~~~ 226 (405)
T PRK09148 149 EEFFPALERAVRHSI-PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAY-SEIYFDGNPPPSVLQVPGA 226 (405)
T ss_pred CCCccCHHHHHhhcc-ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccc-hhhhcCCCCCCChhhCCCc
Confidence 2 3344444333222 36788888887776 3445 467889999999999999997 44444332 2222 222
Q ss_pred Cc--EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 305 CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 305 aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
.+ +++.|++|++ +|.|.|++++++ ++.+.+...
T Consensus 227 ~~~~i~~~SfSK~~~~pGlR~G~~v~~~------~~i~~l~~~ 263 (405)
T PRK09148 227 KDVTVEFTSMSKTFSMAGWRMGFAVGNE------RLIAALTRV 263 (405)
T ss_pred cCcEEEEeccccccCCcchheeeeeCCH------HHHHHHHHH
Confidence 23 5689999987 788999999877 566666543
No 153
>PRK07682 hypothetical protein; Validated
Probab=99.70 E-value=1.3e-15 Score=152.22 Aligned_cols=214 Identities=17% Similarity=0.098 Sum_probs=143.0
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPA 180 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A 180 (385)
.++|-.+++ .+++.+.+++...+.+. ..+|+. ..|.+ ++++.+++++.+.+|.+.+ ..-+|.+++| +.|
T Consensus 22 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~---~~g~~---~lr~~ia~~~~~~~g~~~~-~~~~i~~t~G~~~a 93 (378)
T PRK07682 22 VISLGVGEPDFVTPWNVREASIRSLEQG-YTSYTA---NAGLL---ELRQEIAKYLKKRFAVSYD-PNDEIIVTVGASQA 93 (378)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC---CCCcH---HHHHHHHHHHHHHhCCCCC-CCCcEEEeCChHHH
Confidence 356654444 34667788877665432 223443 12443 7888888888888887431 1013556665 569
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+..++.++++|||+|++.+|.|..+.. .+...|..+. +++++. +++.+|++++++.+.+ ++|+|++..
T Consensus 94 l~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~--~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~ 162 (378)
T PRK07682 94 LDVAMRAIINPGDEVLIVEPSFVSYAP--------LVTLAGGVPV--PVATTLENEFKVQPAQIEAAITA-KTKAILLCS 162 (378)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhhHH--------HHHHcCCEEE--EeecCCccCCCCCHHHHHhhcCc-ccEEEEEEC
Confidence 999999999999999999987654321 2344565443 443442 2468999999998865 789888877
Q ss_pred CCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCCC---CcEEEECCCccC--ccccEEEEEEe
Q 016668 260 SAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFKY---CDVVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 260 s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~g---aDiv~~S~hK~l--~GprgG~I~~~ 327 (385)
++||+ .. ++++|.++|+++|+++++|+++ .++...+...+ .+.+ -.+++.|++|+| +|.|.|+++++
T Consensus 163 p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 241 (378)
T PRK07682 163 PNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIY-AELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP 241 (378)
T ss_pred CCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhh-hhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC
Confidence 77773 33 4889999999999999999997 45554432111 1111 237899999997 58889999998
Q ss_pred CCCCchhHHHHHHhhc
Q 016668 328 KDPVLGVELESAINNA 343 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~~ 343 (385)
+ ++.+++...
T Consensus 242 ~------~~i~~l~~~ 251 (378)
T PRK07682 242 V------YFSEAMLKI 251 (378)
T ss_pred H------HHHHHHHHH
Confidence 7 566666443
No 154
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=2.7e-16 Score=159.81 Aligned_cols=159 Identities=16% Similarity=0.210 Sum_probs=122.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
|+++++.||+ .++++.|.++ .+.+.||+.|+.+++.++++|||+|+++.+.|++.... . ...+...|
T Consensus 59 ~nPtv~~lE~----~la~leg~~~-----av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~--~--~~~l~~~G 125 (432)
T PRK06702 59 GNPTLAAFEQ----KLAELEGGVG-----AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNL--F--GVSLRKLG 125 (432)
T ss_pred CCcHHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH--H--HHHHHHCC
Confidence 6788888886 5888999987 36789999999999999999999999999877654221 0 01134556
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+.++ | ..+|++++++++++ ++|+|++..+.+| ...|+++|+++|+++|+++++|++.... ...
T Consensus 126 i~v~~v----d---~~~d~~~l~~~I~~-~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP-----~~~ 192 (432)
T PRK06702 126 IDVTFF----N---PNLTADEIVALAND-KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATP-----YLC 192 (432)
T ss_pred CEEEEE----C---CCCCHHHHHHhCCc-CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCch-----hhC
Confidence 644333 2 24799999999976 7999998877776 4679999999999999999999997433 234
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEE
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~ 326 (385)
.|++ ||||++.|++|++.|+- ||.++.
T Consensus 193 ~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~ 223 (432)
T PRK06702 193 QAFEHGANIIVHSTTKYIDGHASSLGGIVID 223 (432)
T ss_pred ChhhcCCCEEEEccccccCCCcceeceEEEe
Confidence 6777 89999999999998865 365654
No 155
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.70 E-value=9e-17 Score=170.33 Aligned_cols=204 Identities=19% Similarity=0.162 Sum_probs=141.8
Q ss_pred HHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 152 ~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
.+++.++++||++.. .+.++|| .+|.++++++++|||+||+.. ++|.|--. ..+.+.|+...++.-.
T Consensus 178 eAq~~AA~~fgAd~t-----yFlvNGTS~gn~a~i~a~~~~Gd~VLvdR---N~HKSv~h----gaLiLsGa~PVYl~P~ 245 (720)
T PRK13578 178 DAQKHAAKVFNADKT-----YFVLNGTSASNKVVTNALLTPGDLVLFDR---NNHKSNHH----GALIQAGATPVYLETA 245 (720)
T ss_pred HHHHHHHHHhCCCce-----EEEeCChhHHHHHHHHHhcCCCCEEEeec---ccHHHHHH----HHHHHcCCeEEEeecc
Confidence 467889999999984 3445666 599999999999999999876 46655110 0245777755544322
Q ss_pred ccCCCC---CCCHHH-----HHHHhhhc--------CC-cEEEEc-CCCCCCCCCHHHHHHH-HHHcCcEEEEecccccc
Q 016668 231 LDESTG---LVDYDM-----LEKTAILF--------RP-KLIIAG-ASAYPRDFDYPRMRQI-ADAVGALLMMDMAHISG 291 (385)
Q Consensus 231 ~~~~~~---~iD~d~-----le~~i~~~--------~p-klIi~~-~s~~~~~~dl~~I~~i-a~~~ga~livD~ah~~G 291 (385)
.+ ..| .|+.++ |++.++++ +| |++++. ++.+|...|+++|.++ ++.++ +|++|+||++.
T Consensus 246 ~n-~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RN-PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred cc-ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 22 222 356555 88888664 23 666554 5556899999999998 78888 99999999887
Q ss_pred ccccCc---c-cCCCC-CCc----EEEECCCccCccc-cEEEEEEeCCCCc---hhHHHHHHhhccCCCccCCChHHHHH
Q 016668 292 LVAASV---V-ADPFK-YCD----VVTTTTHKSLRGP-RGGMIFFKKDPVL---GVELESAINNAVFPGLQGGPHNHTIG 358 (385)
Q Consensus 292 li~~g~---~-~~p~~-gaD----iv~~S~hK~l~Gp-rgG~I~~~~~~~~---~~~~~~~i~~~~fp~~qg~p~~~~ia 358 (385)
+.+... + +..++ |+| +++.|+||+|++. ++.+|..+++.+. -+--.++++.+.......+|+...+|
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTSPsY~LmA 403 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTSPFYPLFA 403 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCChHHHHHH
Confidence 765442 2 23345 899 9999999999987 5577777653110 00002566666544455689999999
Q ss_pred HHHHHHHHhhC
Q 016668 359 GLAVCLKHAQS 369 (385)
Q Consensus 359 ala~Al~e~~~ 369 (385)
++.+|.+.+..
T Consensus 404 SLDva~~~m~~ 414 (720)
T PRK13578 404 ALDVNAKMHEG 414 (720)
T ss_pred HHHHHHHHHHH
Confidence 99998887765
No 156
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.70 E-value=2e-15 Score=151.66 Aligned_cols=215 Identities=18% Similarity=0.148 Sum_probs=142.2
Q ss_pred hcccccc--CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC-CCCcceeecCCcH-
Q 016668 103 KSLELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGS- 178 (385)
Q Consensus 103 ~~l~Lia--sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~-~~~~~~V~~~sGs- 178 (385)
..++|-. ++..+++.+++++.+.+.. ...|+. ..|.+ ++++.+++++.+.+|.+. -++.-+|..++|+
T Consensus 29 ~~i~l~~~~p~~~~~~~~~~a~~~~~~~--~~~Y~~---~~G~~---~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~ 100 (393)
T TIGR03538 29 PPIALSIGEPKHPTPAFVLEALRENLHG--LSTYPT---TKGLP---ELRQAIARWLERRFDLPTGVDPERHVLPVNGTR 100 (393)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHhhc--cCCCCC---CCCCH---HHHHHHHHHHHHhhCCcccCCCCceEEECCCcH
Confidence 3444442 3444688899998876542 223443 23444 677777788888777541 1111146666765
Q ss_pred HHHHHHHHHhccCCCE--EeecCCCCCccccCCccccccccccCcceEEEEeccccCCC-CCCCHHHHHHHhhhcCCcEE
Q 016668 179 PANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLI 255 (385)
Q Consensus 179 ~A~~~a~~all~pGD~--Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~iD~d~le~~i~~~~pklI 255 (385)
+|+..++.++++|||. |++++|.+.++.. .+...|..+. ++++++++ +.+|++++++.+.+ ++|+|
T Consensus 101 ~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~--------~~~~~g~~~~--~v~~~~~~~~~~d~~~l~~~~~~-~~k~i 169 (393)
T TIGR03538 101 EALFAFAQAVINPGQAPLVVMPNPFYQIYEG--------AALLAGAEPY--FLNCTAENGFLPDFDAVPESVWR-RCQLL 169 (393)
T ss_pred HHHHHHHHHHcCCCCcceEEecCCCCcchHH--------HHHhcCCeEE--EeeccccCCCCCCHHHHHHHHhh-cceEE
Confidence 5999999999999996 8888886654321 2345666444 44455443 47899999988755 78999
Q ss_pred EEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCc--ccCCC----C-C---Cc--EEEECCCcc--C
Q 016668 256 IAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV--VADPF----K-Y---CD--VVTTTTHKS--L 316 (385)
Q Consensus 256 i~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~--~~~p~----~-g---aD--iv~~S~hK~--l 316 (385)
+++.++||+ ..+ +++|.++|+++|++||+|+++. .+...+. .++.+ . + .| +++.|++|. +
T Consensus 170 ~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~ 248 (393)
T TIGR03538 170 FVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYS-ELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL 248 (393)
T ss_pred EEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchh-hcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCC
Confidence 888888873 344 7888999999999999999973 4443321 11111 0 1 12 678999996 4
Q ss_pred ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 317 RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 317 ~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+|.|.|++++++ ++.+++...
T Consensus 249 ~GlRvG~~i~~~------~l~~~~~~~ 269 (393)
T TIGR03538 249 PGLRSGFVAGDA------EILKAFLRY 269 (393)
T ss_pred cccceEEEecCH------HHHHHHHHH
Confidence 899999999887 566666543
No 157
>PRK06855 aminotransferase; Validated
Probab=99.70 E-value=3e-15 Score=152.72 Aligned_cols=197 Identities=18% Similarity=0.148 Sum_probs=132.9
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhcc
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILK 190 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~ 190 (385)
-.+|+.+.+++...+.+....+|+. ..|.+ ++++...+++.+.+|.+.+ + -+|..++|+. |+..++ .+++
T Consensus 47 ~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~LReaia~~~~~~~g~~~~-~-~~I~it~G~~~al~~~~-~l~~ 117 (433)
T PRK06855 47 EKIPDWMKEIVAELVMDDKSYGYCP---TKGVL---ETREFLAELNNKRGGAQIT-P-DDIIFFNGLGDAIAKIY-GLLR 117 (433)
T ss_pred CCCCHHHHHHHHHHhhcCCCCCCCC---CCCCH---HHHHHHHHHHHhccCCCCC-H-hHEEEcCcHHHHHHHHH-HhcC
Confidence 4678888888877654322223433 23554 7777778888887776431 2 2566777764 887776 4899
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhh-cCCcEEEEcCCCCCC--CC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL-FRPKLIIAGASAYPR--DF 266 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~-~~pklIi~~~s~~~~--~~ 266 (385)
|||.|++.+|.|.++... .....|. +.++++++++ ++.+|+++|++.++. .++|+++++.++||+ ..
T Consensus 118 ~Gd~Vlv~~P~Y~~~~~~-------~~~~~g~--~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~ 188 (433)
T PRK06855 118 REARVIGPSPAYSTHSSA-------EAAHAGY--PPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVY 188 (433)
T ss_pred CCCeEEEeCCCCchHHHH-------HHHhcCC--eEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCC
Confidence 999999999977654210 1112343 4445556543 347999999999864 256888877788873 44
Q ss_pred C---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC-C---C-CcEEEECCCccC--ccccEEEEEEe
Q 016668 267 D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K---Y-CDVVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 267 d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~-~---g-aDiv~~S~hK~l--~GprgG~I~~~ 327 (385)
+ +++|.++|+++|++||+|+++ ..+.+.+..+.++ . . --|++.|++|++ +|+|.||++..
T Consensus 189 s~~~~~~l~~~a~~~~~~II~De~Y-~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p 258 (433)
T PRK06855 189 PKEILREIVDIAREYDLFIICDEIY-NNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVY 258 (433)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccc-cccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEe
Confidence 4 677888899999999999996 5666544222122 1 1 127889999997 78999999984
No 158
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.70 E-value=3e-15 Score=151.25 Aligned_cols=229 Identities=19% Similarity=0.200 Sum_probs=152.0
Q ss_pred cccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 107 LIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 107 Liasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G~-~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
...|++|+ +|.|++++...+. ++..+..++|...|. +...++| +++++++|.+. .+.++||+.||
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~-~~~~~~~~s~~~~~~~~~~~~le----~~la~~~g~~~-----~~~~~SG~~An 118 (406)
T PRK13393 49 VWCSNDYLGMGQHPAVLAAMHEALD-TCGAGAGGTRNISGTNHYHVLLE----AELADLHGKEA-----ALLFTSGYVSN 118 (406)
T ss_pred EeecccccCCCCCHHHHHHHHHHHH-HcCCCCcccccccCChHHHHHHH----HHHHHHhCCCc-----EEEeCCcHHHH
Confidence 35788886 8899999988764 565555555544443 3334444 57889999754 47789999999
Q ss_pred HHHHHHhcc--CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEE
Q 016668 182 FEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLII 256 (385)
Q Consensus 182 ~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi 256 (385)
..++.++.. +||.|+..+..|++.+. .+...|..+..++ ..|++++++.++. .++++|+
T Consensus 119 ~~ai~~l~~~~~g~~I~~~~~~H~s~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~l~~~~~~~~~~v~ 182 (406)
T PRK13393 119 WAALSTLGSRLPGCVILSDELNHASMIE--------GIRHSRAEKRIFR--------HNDPADLERKLSDLDPHRPKLVA 182 (406)
T ss_pred HHHHHHhhcCCCCCEEEEccchhHHHHH--------HHHHcCCeEEEeC--------CCCHHHHHHHHHhccCCCCEEEE
Confidence 999998765 88888877666543321 2234454332222 2477888877753 2467888
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHcCcEEEEecccccccccc-Cc-ccC--CC-CCCcEEEECCCccCccccEEEEEEeCC
Q 016668 257 AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PF-KYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~~--p~-~gaDiv~~S~hK~l~GprgG~I~~~~~ 329 (385)
++..+ .|...|+++|.++|+++|+++++|++|+.|+... |. ... .+ +..|+++.|++|.++ ..||++++++
T Consensus 183 ~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g-~~GG~~~~~~- 260 (406)
T PRK13393 183 FESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFG-VMGGYITGSA- 260 (406)
T ss_pred EcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhc-ccCceeeCCH-
Confidence 76554 4577899999999999999999999998787431 21 101 11 135888899999985 4578888776
Q ss_pred CCchhHHHHHHhhccCCCc-cCCChHHHHHHHHHHHHHhh
Q 016668 330 PVLGVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 330 ~~~~~~~~~~i~~~~fp~~-qg~p~~~~iaala~Al~e~~ 368 (385)
++.+.+.....+.. .++.++...++...+++.+.
T Consensus 261 -----~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~ 295 (406)
T PRK13393 261 -----ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLK 295 (406)
T ss_pred -----HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHh
Confidence 56666654433322 33455555666666776553
No 159
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.70 E-value=1.6e-15 Score=153.57 Aligned_cols=193 Identities=19% Similarity=0.177 Sum_probs=134.5
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--------CCCCCCcceeecCCcH-HHHH
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--------LDENKWGVNVQPLSGS-PANF 182 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--------~~~~~~~~~V~~~sGs-~A~~ 182 (385)
..+++.+.+++.+.+......+|+. ..|.+ ++++.+.+++.+.++ ++.+ +|..++|+ +|+.
T Consensus 49 ~~p~~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~Lr~aia~~~~~~~~~~~~~~~~~~~~----~i~it~G~~~al~ 118 (412)
T PTZ00433 49 LLTPAIQTKALVEAVDSQECNGYPP---TVGSP---EAREAVATYWRNSFVHKESLKSTIKKD----NVVLCSGVSHAIL 118 (412)
T ss_pred CCCCHHHHHHHHHHhhcCCCCCCCC---CCCcH---HHHHHHHHHHHhhccccccccCCCChh----hEEEeCChHHHHH
Confidence 3678999999887665322234554 12443 677777777776654 4443 45566664 6999
Q ss_pred HHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.++.++++|||+|++.+|.|..+.. .+...|..+..++ +++ +++.+|++++++.++. ++|+|+++.++
T Consensus 119 ~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~i~--~~~~~~~~~d~~~l~~~~~~-~~~~i~~~~p~ 187 (412)
T PTZ00433 119 MALTALCDEGDNILVPAPGFPHYET--------VCKAYGIEMRFYN--CRPEKDWEADLDEIRRLVDD-RTKALIMTNPS 187 (412)
T ss_pred HHHHHhcCCCCEEEEccCCcccHHH--------HHHHcCCEEEEEe--cCccccCcCCHHHHHHHhcc-CceEEEEeCCC
Confidence 9999999999999999987654422 2345676555555 443 3458999999988865 78999888888
Q ss_pred CCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCc-ccCC--CC-CCc-EEEECCCccC--ccccEEEEEE
Q 016668 262 YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK-YCD-VVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 262 ~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p--~~-gaD-iv~~S~hK~l--~GprgG~I~~ 326 (385)
||+ .. ++++|.++|+++|++|++|+++ ..+.+.+. +++. +. ..+ +++.|++|+| +|.|.|++++
T Consensus 188 NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 188 NPCGSNFSRKHVEDIIRLCEELRLPLISDEIY-AGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred CCCCcccCHHHHHHHHHHHHHcCCeEEEeccc-cccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEE
Confidence 774 23 4788899999999999999997 46655432 1211 12 123 6789999986 7889999997
No 160
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.70 E-value=2.3e-15 Score=150.37 Aligned_cols=230 Identities=17% Similarity=0.131 Sum_probs=144.3
Q ss_pred ccCCCCC----cHHHHHHHhhHhhccC------CCCCCCCCCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceeecCC
Q 016668 108 IASENFT----SRAVMEAVGSCLTNKY------SEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLS 176 (385)
Q Consensus 108 iasen~~----s~~V~~al~s~l~~~y------~~g~p~~r~~~G~~-~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s 176 (385)
.+|++|. ++.+.+++...+.... ..|..++|...|.. .+++ +++.+++++|.+. .+.++|
T Consensus 9 ~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~----~e~~la~~~~~~~-----~l~~~s 79 (370)
T PRK05937 9 FVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDD----LEHKIAHFHGAPE-----AFIVPS 79 (370)
T ss_pred eECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHH----HHHHHHHHhCCCe-----EEEECC
Confidence 3676765 6777777665554321 23455566555543 3333 4567999999975 367889
Q ss_pred cHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----C
Q 016668 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----R 251 (385)
Q Consensus 177 Gs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~ 251 (385)
|+.||..+...+.++||.|+.....|++... .+..... ..+.+ ..+|++++++.++.. +
T Consensus 80 G~~a~~~~~~~~~~~~d~ii~d~~~H~sv~~--------~~~~~~~--~~~~~------~~~d~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 80 GYMANLGLCAHLSSVTDYVLWDEQVHISVVY--------SLSVISG--WHQSF------RHNDLDHLESLLESCRQRSFG 143 (370)
T ss_pred hHHHHHHHHHHhCCCCCEEEEEhhhhHHHHH--------HHHHcCC--ceEEe------cCCCHHHHHHHHHhhhccCCC
Confidence 9999987777777889988887766543321 1122211 12233 247899999988642 2
Q ss_pred CcEEEEcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcc----cCCCCCCcEEEECCCccCccccEEEEE
Q 016668 252 PKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV----ADPFKYCDVVTTTTHKSLRGPRGGMIF 325 (385)
Q Consensus 252 pklIi~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~----~~p~~gaDiv~~S~hK~l~GprgG~I~ 325 (385)
+++|++...+ .|...|+++|.++|+++|+++++|++|+.|....... ...+...++++.|++|.+ ||.|+.++
T Consensus 144 ~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl 222 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALL 222 (370)
T ss_pred cEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEE
Confidence 3455565443 4678899999999999999999999998885432110 011112346778999976 77887777
Q ss_pred EeCCCCchhHHHHHHhhccCCC-ccCCChHHHHHHHHHHHHHhhC
Q 016668 326 FKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~fp~-~qg~p~~~~iaala~Al~e~~~ 369 (385)
+.+ ++...+.....|. ..++.++..++++..+++.+..
T Consensus 223 ~~~------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~ 261 (370)
T PRK05937 223 SSS------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQ 261 (370)
T ss_pred cCH------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHh
Confidence 765 4444433221122 2334566678888888876643
No 161
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=2.6e-16 Score=158.32 Aligned_cols=161 Identities=18% Similarity=0.109 Sum_probs=121.6
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccC
Q 016668 141 GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (385)
Q Consensus 141 ~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (385)
.|++..+.||+ +++.+.|.+. .+.++||+.|+.+++.++++|||+|+++++.|+++.... ...+...
T Consensus 61 ~gnPt~~~Le~----~la~le~~~~-----~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~----~~~l~~~ 127 (395)
T PRK05967 61 RGTPTTDALCK----AIDALEGSAG-----TILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFC----DTMLKRL 127 (395)
T ss_pred CCChHHHHHHH----HHHHHhCCCC-----EEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHH----HHHHHhc
Confidence 47888888876 5667777654 477889999999999999999999999998877643200 0123455
Q ss_pred cceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 221 SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 221 g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
|..+..+. .+ +.+.+++.+++ ++|+|+++.+++| ...|+++|+++|+++|+++++|+++..++ .
T Consensus 128 Gi~v~~vd--~~------~~e~l~~al~~-~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~-----~ 193 (395)
T PRK05967 128 GVEVEYYD--PE------IGAGIAKLMRP-NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPL-----Y 193 (395)
T ss_pred CeEEEEeC--CC------CHHHHHHhcCc-CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCce-----e
Confidence 65544432 21 45779998865 7999999987776 56789999999999999999999985443 3
Q ss_pred cCCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 299 ~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
..|++ |+|+++.|.+|++.|.. +|+++.++
T Consensus 194 ~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~ 227 (395)
T PRK05967 194 FRPLDFGVDISIHAATKYPSGHSDILLGTVSANE 227 (395)
T ss_pred cChhHcCCCEEEEecccccCCCCCeeEEEEEcCH
Confidence 46777 99999999999987753 57666554
No 162
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.69 E-value=5.5e-15 Score=150.96 Aligned_cols=168 Identities=18% Similarity=0.271 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh---------ccCCCEEeecCCCCCccccCCcccccc
Q 016668 145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---------LKPHDRIMGLDLPHGGHLSHGFMTPKR 215 (385)
Q Consensus 145 ~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al---------l~pGD~Vl~~~~~~ggh~s~~~~~~~~ 215 (385)
...++|+ .+++++|.++ .+.++|||.|+..++.++ ++|||+|+++++.|.+...
T Consensus 64 ~~~~fe~----~lA~~~g~~~-----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~-------- 126 (438)
T PRK15407 64 FNDAFEK----KLAEFLGVRY-----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVN-------- 126 (438)
T ss_pred hHHHHHH----HHHHHhCCCe-----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHH--------
Confidence 3456665 5888999875 366788999999998876 4899999999986654321
Q ss_pred ccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEecccccccccc
Q 016668 216 RVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA 295 (385)
Q Consensus 216 ~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~ 295 (385)
.+...|.. ++.++++++++.+|++.+++.+.. ++|+|++..+ ++...|+++|.++|+++|++||+|++|+.|....
T Consensus 127 ~v~~~G~~--pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~ 202 (438)
T PRK15407 127 PIIQNGLV--PVFVDVELPTYNIDASLLEAAVSP-KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYD 202 (438)
T ss_pred HHHHcCCE--EEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccchhhhcC
Confidence 33455654 445556656788999999999865 7898887643 5566799999999999999999999999887665
Q ss_pred CcccCCCCCCcEEEECCC--ccCccccEEEEEEeCCCCchhHHHHHH
Q 016668 296 SVVADPFKYCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 296 g~~~~p~~gaDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i 340 (385)
|.... ...|+.++|+| |.+....||+|+++++ ++.+++
T Consensus 203 g~~~G--~~gd~~~fSf~~~k~~~~geGG~l~t~d~-----~l~~~~ 242 (438)
T PRK15407 203 GRMTG--TFGDIATLSFYPAHHITMGEGGAVFTNDP-----LLKKII 242 (438)
T ss_pred Ceeee--ccCceEEEeCCCCCCccccCceEEEECCH-----HHHHHH
Confidence 53211 13598888888 6575556999999987 555544
No 163
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.69 E-value=3.3e-15 Score=150.71 Aligned_cols=204 Identities=15% Similarity=0.059 Sum_probs=138.4
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKP 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~p 191 (385)
.+++.+.+++...+... ..+|+. ..|.+ ++++.+++++++.+|.+... .+|.+++|+ .|+..++.++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~-~~~Y~~---~~G~~---~lr~~ia~~l~~~~g~~~~~--~~i~~t~G~~~al~~~~~~~~~~ 116 (402)
T PRK06107 46 DTPDHIKQAAVAAIERG-ETKYTL---VNGTP---ALRKAIIAKLERRNGLHYAD--NEITVGGGAKQAIFLALMATLEA 116 (402)
T ss_pred CCCHHHHHHHHHHHHcC-CCCCCC---CCCCH---HHHHHHHHHHHHhcCCCCCh--hhEEEeCCHHHHHHHHHHHhcCC
Confidence 34788889888776532 223443 23554 67777788888888985421 256677775 6999999999999
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CC--
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DF-- 266 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~-- 266 (385)
||+|++++|.+.+|.. .+...+.. .++++.+.+ ++.+|++++++.+.. ++++|++..++||+ ..
T Consensus 117 gd~vl~~~p~y~~y~~--------~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~p~NPtG~~~s~ 185 (402)
T PRK06107 117 GDEVIIPAPYWVSYPD--------MVLANDGT--PVIVACPEEQGFKLTPEALEAAITP-RTRWLILNAPSNPTGAVYSR 185 (402)
T ss_pred CCEEEEecCCCcCHHH--------HHHHcCCE--EEEecCCcccCCCCCHHHHHhhcCc-CceEEEEECCCCCCCcCcCH
Confidence 9999999987655432 22334433 334444432 357999999998854 68888877777663 44
Q ss_pred -CHHHHHHHHHHc-CcEEEEeccccccccccCc-ccCCC---CC--Cc-EEEECCCccC--ccccEEEEEEeCCCCchhH
Q 016668 267 -DYPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPF---KY--CD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 267 -dl~~I~~ia~~~-ga~livD~ah~~Gli~~g~-~~~p~---~g--aD-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~ 335 (385)
++++|+++|+++ |+++|+|+++. .+.+.+. .++.. .+ .. +++.|++|+| +|.|.|++++++ +
T Consensus 186 ~~~~~l~~~a~~~~~~~iI~De~y~-~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~------~ 258 (402)
T PRK06107 186 AELRALADVLLRHPHVLVLTDDIYD-HIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA------D 258 (402)
T ss_pred HHHHHHHHHHHHcCCeEEEEehhcc-ccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH------H
Confidence 467888889998 99999999974 4444332 22211 11 22 6789999997 678999999887 5
Q ss_pred HHHHHhhc
Q 016668 336 LESAINNA 343 (385)
Q Consensus 336 ~~~~i~~~ 343 (385)
+.+.+...
T Consensus 259 ~~~~~~~~ 266 (402)
T PRK06107 259 LIAAINKL 266 (402)
T ss_pred HHHHHHHH
Confidence 66666554
No 164
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=7.6e-16 Score=154.42 Aligned_cols=206 Identities=18% Similarity=0.147 Sum_probs=139.7
Q ss_pred hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-
Q 016668 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP- 179 (385)
Q Consensus 103 ~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~- 179 (385)
.-++|-..+|+ ++|.+++++... . ....||.. + ..++ ++.+++++|++.+ +|.+++|+.
T Consensus 53 ~~i~l~~n~~p~~~~~~v~~a~~~~-~--~~~~Yp~~----~---~~~l----r~~ia~~~~~~~~----~I~~t~Ga~~ 114 (380)
T PLN03026 53 DIVKLDANENPYGPPPEVLEALGNM-K--FPYVYPDP----E---SRRL----RAALAEDSGLESE----NILVGCGADE 114 (380)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHhh-H--hhccCCCC----C---HHHH----HHHHHHHhCcChh----hEEEcCCHHH
Confidence 33666655554 588899987642 1 11123321 1 1234 4567888998874 566777765
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
++..++.++++|||+|++++|.++.+.. .....|..+..++ .+ +++.+|++++++.++..++|+|+++.
T Consensus 115 ~i~~~~~~~~~~gd~Vlv~~P~y~~y~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 183 (380)
T PLN03026 115 LIDLLMRCVLDPGDKIIDCPPTFGMYVF--------DAAVNGAEVIKVP--RT-PDFSLDVPRIVEAVETHKPKLLFLTS 183 (380)
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEee--cC-CCCCcCHHHHHHHHhccCCcEEEEeC
Confidence 8888888999999999999987653321 2345676554444 44 34679999999988445799999888
Q ss_pred CCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCC--CcEEEECCCccC--ccccEEEEEEeCCCCch
Q 016668 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY--CDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 260 s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~g--aDiv~~S~hK~l--~GprgG~I~~~~~~~~~ 333 (385)
++|| ...+.+++.++++.. +++++|+++ ..+...+.....++. -.+++.|++|.+ +|.|.|++++++
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY-~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~----- 256 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLDEAY-IEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL----- 256 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEECcc-hhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCH-----
Confidence 8876 577899999999865 899999997 344432211111222 237889999996 788999999987
Q ss_pred hHHHHHHhhccC
Q 016668 334 VELESAINNAVF 345 (385)
Q Consensus 334 ~~~~~~i~~~~f 345 (385)
++.+.+.....
T Consensus 257 -~~i~~l~~~~~ 267 (380)
T PLN03026 257 -SIIEYLWRAKQ 267 (380)
T ss_pred -HHHHHHHHhcC
Confidence 57777765443
No 165
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=1.7e-15 Score=150.86 Aligned_cols=212 Identities=17% Similarity=0.150 Sum_probs=146.1
Q ss_pred cccccCC--CCCcHHHHHHHhhHhhcc--CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-
Q 016668 105 LELIASE--NFTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP- 179 (385)
Q Consensus 105 l~Liase--n~~s~~V~~al~s~l~~~--y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~- 179 (385)
++|-..+ -.+++.+++++...+... ...+||. .|. ..+++.+++++.+.+|.+-+ + .+|.+++|+.
T Consensus 29 i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~----~g~---~~lr~aia~~~~~~~~~~~~-~-~~I~it~G~~~ 99 (368)
T PRK03317 29 VRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD----RDA---VALRADLAAYLTAQTGVGLT-V-ENVWAANGSNE 99 (368)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC----Cch---HHHHHHHHHHhhhhccCCCC-h-hhEEECCCHHH
Confidence 4554444 346888999988765421 1234543 132 36777777788777765421 1 2577788865
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
++..++.++++|||.|++..|.|.++.. .....|. +.++++.+ +++.+|++++++.++..++|+|+++.
T Consensus 100 ~l~~~~~~~~~~gd~v~v~~P~y~~~~~--------~~~~~g~--~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~i~l~~ 168 (368)
T PRK03317 100 ILQQLLQAFGGPGRTALGFVPSYSMHPI--------IARGTHT--EWVEGPRA-ADFTLDVDAAVAAIAEHRPDVVFLTS 168 (368)
T ss_pred HHHHHHHHhcCCCCEEEEeCCChHHHHH--------HHHhcCC--eeEEcccC-CCCCCCHHHHHHHHhccCCCEEEEeC
Confidence 9999999999999999999987755422 2234444 44454443 34679999999998756789988888
Q ss_pred CCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCc-EEEECCCccC--ccccEEEEEEeCCC
Q 016668 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 260 s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaD-iv~~S~hK~l--~GprgG~I~~~~~~ 330 (385)
++|| ...+.+++.++++.++++||+|++|. ++...+. +..+. .-+ +++.|++|++ +|.|.|++++++
T Consensus 169 p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~-~~~~~~~-~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~-- 244 (368)
T PRK03317 169 PNNPTGTALPLDDVEAILDAAPGIVVVDEAYA-EFRRSGT-PSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP-- 244 (368)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCceEEEeCCch-hhcccCC-cCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--
Confidence 8775 67889999999999999999999984 4433332 12121 224 6788999987 588889999877
Q ss_pred CchhHHHHHHhhcc
Q 016668 331 VLGVELESAINNAV 344 (385)
Q Consensus 331 ~~~~~~~~~i~~~~ 344 (385)
++.+.+....
T Consensus 245 ----~~~~~l~~~~ 254 (368)
T PRK03317 245 ----AVVDALRLVR 254 (368)
T ss_pred ----HHHHHHHhcC
Confidence 6777776543
No 166
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.69 E-value=5.5e-15 Score=149.59 Aligned_cols=196 Identities=13% Similarity=0.037 Sum_probs=134.4
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhcc
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILK 190 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~ 190 (385)
..+++.+++++...+......+|+. ..|.+ ++++..++++.+.+|.+.+ + -+|..++|+ +|+..++.++++
T Consensus 48 ~~~p~~~~~a~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~-~-~~I~it~G~~~al~~~~~~l~~ 119 (409)
T PLN00143 48 FRTTNIAEDAIVEAVRSAKFNSYAP---TGGIL---PARRAIADYLSNDLPYQLS-P-DDVYLTLGCKHAAEIIIKVLAR 119 (409)
T ss_pred CCCCHHHHHHHHHHHhCcCCCCCCC---CCCCH---HHHHHHHHHHHhhcCCCCC-H-hhEEEecChHHHHHHHHHHHcC
Confidence 5778999999887665432233432 13544 6777777777777664321 1 245666665 599999999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
|||.|++.+|.|.++.. .+...|..+..++ +++ +++.+|+++++++++. +++++++..|+|| ...+
T Consensus 120 ~gd~v~v~~P~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~~~~~nP~NPTG~~~s 188 (409)
T PLN00143 120 PEANILLPRPGFPDVET--------YAIFHHLEIRHFD--LLPEKGWEVDLDAVEAIADE-NTIAMVIINPGNPCGSVYS 188 (409)
T ss_pred CCCEEEEcCCCCcCHHH--------HHHHcCCEEEEEe--ccCCCCCcCCHHHHHHhccc-CCEEEEEECCCCCCCCccC
Confidence 99999999997755422 2345565444444 432 3457999999988754 6777777777876 3444
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCCc--EEEECCCccC--ccccEEEEEEe
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCD--VVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~gaD--iv~~S~hK~l--~GprgG~I~~~ 327 (385)
+++|.++|+++++++|+|+++ ..+.+.+....++ +..+ +++.|++|++ +|+|.|++++.
T Consensus 189 ~~~~~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~ 257 (409)
T PLN00143 189 YEHLNKIAETARKLGILVIADEVY-GHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWLVTC 257 (409)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccc-cccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEEEee
Confidence 678889999999999999996 5666544321222 2222 6789999994 88999999984
No 167
>PRK07683 aminotransferase A; Validated
Probab=99.69 E-value=5.2e-15 Score=148.55 Aligned_cols=235 Identities=14% Similarity=0.090 Sum_probs=150.6
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccCC--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Liase--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
.+++++.+..+..+..........++|-.++ ...++.+.+++...+.+.. .+|+. ..|.+ ++++..++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-~~Y~~---~~g~~---~lr~~ia~~l~ 79 (387)
T PRK07683 7 PRVKDIQISGIRQFSNMVQNYDNLISLTIGQPDFPTPSHVKEAAKRAITENY-TSYTH---NAGLL---ELRKAACNFVK 79 (387)
T ss_pred HHHHhCCccHHHHHHHHHHhcCCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCC---CCCCH---HHHHHHHHHHH
Confidence 3444444444443333322112334554332 2346788898888776432 23432 12443 78877777777
Q ss_pred HHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCC
Q 016668 159 AAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~ 237 (385)
+.+|...+ ...+|..++| +.|+..++.+++++||+|++++|.+.++.. .+...|..+ ++++.++++..
T Consensus 80 ~~~g~~~~-~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~~~~~~~~~~ 148 (387)
T PRK07683 80 DKYDLHYS-PESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEP--------IIRLCGAKP--VFIDTRSTGFR 148 (387)
T ss_pred HHhCCCCC-CCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHH--------HHHHcCCEE--EEeecCcccCC
Confidence 77676321 1113555555 569999999999999999999986654321 234566644 45556545567
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-C-----Cc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-Y-----CD 306 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-g-----aD 306 (385)
+|.+++++.++. ++|+|++..++||+ .. ++++|.++|+++|+++++|+++. .+.+.+... ++. . -.
T Consensus 149 ~~~~~l~~~~~~-~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~~~~~v 225 (387)
T PRK07683 149 LTAEALENAITE-KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYS-ELVYEQPHT-SIAHFPEMREKT 225 (387)
T ss_pred CCHHHHHHhcCc-CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccc-cceeCCCcC-ChhhccCCcCCe
Confidence 899999998864 78999888777763 33 48889999999999999999974 444333221 221 1 23
Q ss_pred EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 307 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+++.|++|.+ +|.|.|++++++ ++.+++..
T Consensus 226 i~~~s~SK~~~~pGlRiG~i~~~~------~l~~~~~~ 257 (387)
T PRK07683 226 IVINGLSKSHSMTGWRIGFLFAPS------YLAKHILK 257 (387)
T ss_pred EEEeeccccccCccceeEEEEcCH------HHHHHHHH
Confidence 7899999997 688999999987 56665543
No 168
>PLN02822 serine palmitoyltransferase
Probab=99.69 E-value=2.9e-15 Score=154.68 Aligned_cols=220 Identities=14% Similarity=0.120 Sum_probs=142.8
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.+|.+.+++...+. +|..|+.+.|.+.| ++...++ ++++++++|.+. .|.+++|..++..++.+++++|
T Consensus 124 ~~~~i~ea~~~al~-~~G~g~~g~r~~yg~~~~~~~L----ee~La~~~~~~~-----~i~~s~G~~a~~sai~a~~~~g 193 (481)
T PLN02822 124 GNEKIKESCTSALE-KYGVGSCGPRGFYGTIDVHLDC----ETKIAKFLGTPD-----SILYSYGLSTIFSVIPAFCKKG 193 (481)
T ss_pred CCHHHHHHHHHHHH-HhCCCCcccCccccCHHHHHHH----HHHHHHHhCCCC-----EEEECCHHHHHHHHHHHhCCCC
Confidence 58999999987764 56667777665434 3433344 457899999765 4667788778999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh--------cCC-cEEEEcCC--C
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--------FRP-KLIIAGAS--A 261 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~--------~~p-klIi~~~s--~ 261 (385)
|.|++....| .+.. ..+.+.+..+. .++.+ |.++++..+++ .++ ++|++++. +
T Consensus 194 d~Ii~d~~~H---~s~~-----~~~~ls~~~~~--~~~~n------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~ 257 (481)
T PLN02822 194 DIIVADEGVH---WGIQ-----NGLYLSRSTIV--YFKHN------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQN 257 (481)
T ss_pred CEEEEeCCcc---HHHH-----HHHHHcCCeEE--EECCC------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCC
Confidence 9999765433 2211 13345555433 33332 44444444421 124 67887654 3
Q ss_pred CCCCCCHHHHHHHHHHcCcEEEEecccccccccc-Cc----ccCC-CCCCcEEEECCCccCccccEEEEEEeCCCCchhH
Q 016668 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV----VADP-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 262 ~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~----~~~p-~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~ 335 (385)
.|...|+++|+++|++||++|++|++|..|.... |. +... .+..|++++|++|+| |..||++++++ +
T Consensus 258 ~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKal-g~~GG~i~g~~------~ 330 (481)
T PLN02822 258 SGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHAL-ATEGGFCTGSA------R 330 (481)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhh-hhCCeEEEcCH------H
Confidence 5678899999999999999999999998775431 21 1111 125689999999998 56779999887 5
Q ss_pred HHHHHhhccCCCccCC--ChHHHHHHHHHHHHHh
Q 016668 336 LESAINNAVFPGLQGG--PHNHTIGGLAVCLKHA 367 (385)
Q Consensus 336 ~~~~i~~~~fp~~qg~--p~~~~iaala~Al~e~ 367 (385)
+.+.+.........++ |.....|++ .||+.+
T Consensus 331 ii~~~~~~~~~~~fsa~lPp~~~~Aa~-~aL~~l 363 (481)
T PLN02822 331 VVDHQRLSSSGYVFSASLPPYLASAAI-TAIDVL 363 (481)
T ss_pred HHHHHHhcCCceeeccccCHHHHHHHH-HHHHHH
Confidence 6666654333334443 233344443 367554
No 169
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.69 E-value=4.8e-16 Score=155.93 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=127.8
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcc
Q 016668 132 EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFM 211 (385)
Q Consensus 132 ~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~ 211 (385)
.+|-+.|+ |+++.+.+|+ +++++.|.+. .+.+.||+.|+.+++.+++++||+|++.+..|++-.. ..
T Consensus 45 ~~~~Y~R~--gnPt~~~le~----~la~Le~g~~-----a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~--~~ 111 (386)
T PF01053_consen 45 KGYIYSRY--GNPTVRALEQ----RLAALEGGED-----ALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYR--LL 111 (386)
T ss_dssp SSCSBTTT--C-HHHHHHHH----HHHHHHT-SE-----EEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHH--HH
T ss_pred CCcceecc--ccccHHHHHH----HHHHhhcccc-----eeeccchHHHHHHHHHhhcccCCceEecCCccCcchh--hh
Confidence 45666665 8998888887 5788999876 3667899999999999999999999999877765322 10
Q ss_pred ccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcC-cEEEEeccc
Q 016668 212 TPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVG-ALLMMDMAH 288 (385)
Q Consensus 212 ~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~g-a~livD~ah 288 (385)
. ......|..+ ..+ | .-|++++++.+++ ++++|++..+.|| ...|+++|+++|+++| +++++|++.
T Consensus 112 ~--~~l~~~gv~v--~~~--d----~~d~~~l~~~l~~-~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 112 E--ELLPRFGVEV--TFV--D----PTDLEALEAALRP-NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp H--HCHHHTTSEE--EEE--S----TTSHHHHHHHHCT-TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTT
T ss_pred h--hhhcccCcEE--EEe--C----chhHHHHHhhccc-cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccc
Confidence 0 1123345543 332 2 2489999999976 7999999998887 4679999999999999 999999997
Q ss_pred cccccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeC-CCCchhHHHHHHh
Q 016668 289 ISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK-DPVLGVELESAIN 341 (385)
Q Consensus 289 ~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~-~~~~~~~~~~~i~ 341 (385)
+.++ ...|++ |+|+++.|..|.+.|.. +|.|++++ . ++.+++.
T Consensus 181 atp~-----~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~-----~~~~~l~ 228 (386)
T PF01053_consen 181 ATPY-----NQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSS-----ELYDRLR 228 (386)
T ss_dssp THTT-----TC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHH-----HHHHHHH
T ss_pred ccee-----eeccCcCCceEEEeeccccccCCcceeeEEEEECchh-----hhhhhhc
Confidence 6543 346788 89999999999998876 78888876 3 5555554
No 170
>PLN02721 threonine aldolase
Probab=99.68 E-value=2.8e-15 Score=147.53 Aligned_cols=191 Identities=19% Similarity=0.140 Sum_probs=124.2
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc-C
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~-p 191 (385)
++++.+++++.....+ . ...+| .+..+++|+ .+++++|.+. .+.+++|+.++.+++.++++ |
T Consensus 17 ~~~~~~~~a~~~~~~~-----~-~~~~~--~~~~~~l~~----~la~~~~~~~-----~~~~~~Gs~a~~~~l~~~~~~~ 79 (353)
T PLN02721 17 KPTDAMRAAMANAEVD-----D-DVLGY--DPTALRLEE----EMAKIFGKEA-----ALFVPSGTMGNLISVLVHCDVR 79 (353)
T ss_pred CCCHHHHHHHHhccCC-----C-cccCC--CHHHHHHHH----HHHHHhCCce-----eEEecCccHHHHHHHHHHccCC
Confidence 4678888887642011 1 11122 233455554 5788999875 35677899998888888887 9
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh------cCCcEEEEcC-CCCC-
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKLIIAGA-SAYP- 263 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~------~~pklIi~~~-s~~~- 263 (385)
||+|++.++.|-+....+ ......|..+.. ++.+ +++.+|+|++++.+++ .++|+|+++. ++++
T Consensus 80 gd~Vl~~~~~~~~~~~~~-----~~~~~~g~~~~~--v~~~-~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~ 151 (353)
T PLN02721 80 GSEVILGDNSHIHLYENG-----GISTLGGVHPRT--VKNN-EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCG 151 (353)
T ss_pred CCeEEEcCccceehhccc-----chhhhcCceeEe--cCCC-cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccC
Confidence 999999987542111000 012345654443 3344 3567999999999863 2688888755 3443
Q ss_pred -CCCC---HHHHHHHHHHcCcEEEEeccccccccc-cCcccCCC-CCCcEEEECCCccCccccEEEEEEeC
Q 016668 264 -RDFD---YPRMRQIADAVGALLMMDMAHISGLVA-ASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKK 328 (385)
Q Consensus 264 -~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~-~g~~~~p~-~gaDiv~~S~hK~l~GprgG~I~~~~ 328 (385)
...| +++|.++|+++|+++++|++|..+... .+..+..+ .++|.++.|+||+|++|.|++++.++
T Consensus 152 G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~ 222 (353)
T PLN02721 152 GRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSK 222 (353)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCH
Confidence 3444 789999999999999999998644211 12212222 27888888999999888777666665
No 171
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.68 E-value=9.1e-16 Score=152.96 Aligned_cols=240 Identities=14% Similarity=0.107 Sum_probs=156.1
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
+.++|....+|+.|++++...+.+..+.|.... ..+...++.+.++ .+++.++++||++.+ +.+.+...||+.|+.+
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~-~~~~~l~~l~~~~~~-~~v~~~~gsgt~~~Ea 82 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAE-EAEADLRELLNIPDN-YKVLFLQGGASLQFAM 82 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCC-cEEEEEcCCchHHHHH
Confidence 457799999999999999877643211111100 1122344545555 478999999998432 2255555678889999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHH-HhhhcCCcEEEEcC--C
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLIIAGA--S 260 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~-~i~~~~pklIi~~~--s 260 (385)
++..++.+||++++.. .|.++|.+. +.+...|.. ..+. .++..+..+..++++ .+++ ++++|.+.. +
T Consensus 83 ~~~nl~~~g~~~l~i~---~G~fg~r~~---~~a~~~g~~-~~~~--~~~~~g~~~~~~~~~~~l~~-~~~~V~~th~eT 152 (360)
T PRK05355 83 VPMNLLGGGKKADYVD---TGSWSKKAI---KEAKKYGEV-NVAA--SSEDDGFTYIPPLDEWQLSD-DAAYVHYTSNET 152 (360)
T ss_pred HHHhcCCCCCeEEEEE---CCHHHHHHH---HHHHHhCCc-eEEe--cccccCCCCCCChhhccCCC-CCCEEEEccCCC
Confidence 9999999999998875 355555542 233445642 3333 222234455445544 5544 688887643 4
Q ss_pred CCCCCC-CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 261 AYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 261 ~~~~~~-dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
++|... |+++| +|+++++|+++++|.. +-+++..|++++|.||+| ||.| |+++.+++ +.+
T Consensus 153 stGv~~~~i~~i------~g~l~vVDavss~g~~-----~idv~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~l~ 214 (360)
T PRK05355 153 IDGTEFHELPDT------GDVPLVADMSSDILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTIVIVRED------LLG 214 (360)
T ss_pred cceEecCccccc------CCCcEEEEcCccccCc-----cCCHHHccEEEEeccccc-cCCceEEEEECHH------HHh
Confidence 456665 66665 8999999999987743 233335679999999987 6998 88888774 222
Q ss_pred HHhh-----------ccCCCccCCChHHHHHHHHHHHHHhhCc-hHHH
Q 016668 339 AINN-----------AVFPGLQGGPHNHTIGGLAVCLKHAQSP-EFKV 374 (385)
Q Consensus 339 ~i~~-----------~~fp~~qg~p~~~~iaala~Al~e~~~~-~~~~ 374 (385)
+++. .......++|+.+.+.|+..||+.+.++ ++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~ 262 (360)
T PRK05355 215 RALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAA 262 (360)
T ss_pred hcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHH
Confidence 2211 1111123689999999999999999877 5643
No 172
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=5.8e-16 Score=157.56 Aligned_cols=166 Identities=22% Similarity=0.206 Sum_probs=121.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
|.+.|+ +++..++||+ .+++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|++... ...
T Consensus 50 ~~y~r~--~~pt~~~Le~----~lA~l~g~~~-----~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~--~~~- 115 (425)
T PRK06084 50 NIYTRI--MNPTNDVLEQ----RVAALEGGVG-----ALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYN--LLA- 115 (425)
T ss_pred ccccCC--CCchHHHHHH----HHHHHhCCCc-----eeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHH--HHH-
Confidence 444443 5666667765 5888999765 3668899999999999999999999999887765321 100
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
..+...|. ++..+ + ..|++++++.+++ ++|+|+++.+++| ...|+++|.++|+++|+++++|++|..+
T Consensus 116 -~~l~~~gi--~v~~~--d----~~d~e~le~ai~~-~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~ 185 (425)
T PRK06084 116 -HTLPRIGI--ETRFA--A----HDDIAALEALIDE-RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATP 185 (425)
T ss_pred -Hhccccee--EEEEE--C----CCCHHHHHHHhcc-CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc
Confidence 01122333 32232 2 2489999999865 7899999877665 5789999999999999999999999765
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
+. ..|++ ++|++++|+||++.|+. ||+++.++
T Consensus 186 ~~-----~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~ 221 (425)
T PRK06084 186 VL-----CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSG 221 (425)
T ss_pred cc-----CChhhcCCCEEEECchhcccccccceeEEEEeCC
Confidence 43 34566 89999999999998763 57676543
No 173
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.68 E-value=1.2e-15 Score=152.15 Aligned_cols=175 Identities=25% Similarity=0.300 Sum_probs=132.7
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|.+.|+ ||++.+.+|+ .++++-|.+. .+.+.||+.|+..++.+++++||+|+..+..||+... ...
T Consensus 54 ~~~Y~R~--~nPT~~~lE~----~~a~LEg~~~-----~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~--~~~ 120 (396)
T COG0626 54 GYDYSRT--GNPTRDALEE----ALAELEGGED-----AFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYR--LFE 120 (396)
T ss_pred CcccccC--CCccHHHHHH----HHHHhhCCCc-----EEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHH--HHH
Confidence 4556554 7898999887 4778888887 3678999999999999999999999999887876432 111
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
......|. ++..+ + .-|.+++++.+.+.++|+|++..|.|| ...|+++|+++|+++|+++++|++.+.
T Consensus 121 --~~l~~~gi--~~~~~--d----~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfat 190 (396)
T COG0626 121 --KILQKFGV--EVTFV--D----PGDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFAT 190 (396)
T ss_pred --HHHHhcCe--EEEEE--C----CCChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccc
Confidence 12233454 33332 2 124456666665447999999999888 578999999999999999999999765
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHH
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i 340 (385)
+ .++.|++ |+||++.|..|.+.|.. +|+++++++ ++.+.+
T Consensus 191 P-----~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~-----~~~~~~ 234 (396)
T COG0626 191 P-----VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNE-----ELYELL 234 (396)
T ss_pred c-----cccChhhcCCCEEEEeccccccCCcceeeeEEecChH-----HHHHHH
Confidence 4 3467888 89999999999998874 587777776 566655
No 174
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.68 E-value=7.3e-16 Score=157.03 Aligned_cols=160 Identities=22% Similarity=0.189 Sum_probs=120.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+.||+ .++++.|.++ .+.+.||+.|+..++.++++|||+|++.++.|++...- + ...+...|
T Consensus 62 ~~p~~~~Le~----~lA~leg~~~-----al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~-~---~~~~~~~G 128 (431)
T PRK08248 62 MNPTTDVFEK----RIAALEGGIG-----ALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNL-F---AHTLPKLG 128 (431)
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHH-H---HHHHHhCC
Confidence 5676777776 5888999876 47789999999999999999999999998877653210 0 01223456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
.. +..++. .|++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|+++..+. ..
T Consensus 129 v~--v~~vd~------~d~e~l~~ai~~-~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~-----~~ 194 (431)
T PRK08248 129 IT--VKFVDP------SDPENFEAAITD-KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPY-----LL 194 (431)
T ss_pred EE--EEEECC------CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccc-----cC
Confidence 54 444322 489999999865 7899988776665 67899999999999999999999986443 23
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
.|++ ++|+++.|+||++.|+. ||+++.+.
T Consensus 195 ~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~ 227 (431)
T PRK08248 195 RPIEHGADIVVHSATKFIGGHGTSIGGVIVDSG 227 (431)
T ss_pred ChhHcCCCEEEEcCccccCCCCCceEEEEEeCC
Confidence 4566 89999999999998763 46666544
No 175
>PRK08175 aminotransferase; Validated
Probab=99.68 E-value=1.4e-14 Score=145.78 Aligned_cols=204 Identities=19% Similarity=0.157 Sum_probs=134.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pG 192 (385)
+++.+.+++...+.+....+|+. ..|.+ ++++..++++.+.+|..-+ ...++..++|+ .++..++.++++||
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~lr~aia~~~~~~~g~~~~-~~~~i~~t~G~~~~l~~~~~~~~~~g 115 (395)
T PRK08175 43 TPPHIVEKLCEVAQRPDTHGYST---SRGIP---RLRRAISRWYQDRYDVDID-PESEAIVTIGSKEGLAHLMLATLDHG 115 (395)
T ss_pred CCHHHHHHHHHHHhCCCcCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCC-CCCcEEEccCcHHHHHHHHHHhCCCC
Confidence 45667777766554332233443 23554 7777777888877776421 11145567776 58888888999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCC--CCCCH
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYP--RDFDY 268 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~~--~~~dl 268 (385)
|+|++.+|.|..+.. .....|..+. +++++++ ..+.+++++.++. .++|+|+++.++|| ...+.
T Consensus 116 d~Vlv~~P~y~~~~~--------~~~~~g~~~~--~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~ 183 (395)
T PRK08175 116 DTVLVPNPSYPIHIY--------GAVIAGAQVR--SVPLVEG--VDFFNELERAIRESYPKPKMMILGFPSNPTAQCVEL 183 (395)
T ss_pred CEEEEcCCCCcchHH--------HHHHcCCeEE--EEecccC--CCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCH
Confidence 999999987654321 2235565444 4445432 3357888888764 26789888877766 44555
Q ss_pred ---HHHHHHHHHcCcEEEEeccccccccccCcc-cCC--CCC-Cc--EEEECCCccC--ccccEEEEEEeCCCCchhHHH
Q 016668 269 ---PRMRQIADAVGALLMMDMAHISGLVAASVV-ADP--FKY-CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELE 337 (385)
Q Consensus 269 ---~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p--~~g-aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~ 337 (385)
++|.++|+++|+++|+|+++ ..+...+.. ++. +++ .| +++.|++|+| +|.|.|+++.++ ++.
T Consensus 184 ~~~~~i~~~a~~~~i~ii~De~y-~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~------~l~ 256 (395)
T PRK08175 184 EFFEKVVALAKRYDVLVVHDLAY-ADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP------ELV 256 (395)
T ss_pred HHHHHHHHHHHHcCcEEEEecch-HhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH------HHH
Confidence 78899999999999999997 345443322 221 122 34 5689999997 678899999876 566
Q ss_pred HHHhhc
Q 016668 338 SAINNA 343 (385)
Q Consensus 338 ~~i~~~ 343 (385)
+++.+.
T Consensus 257 ~~~~~~ 262 (395)
T PRK08175 257 SALARI 262 (395)
T ss_pred HHHHHH
Confidence 666543
No 176
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.67 E-value=8.8e-15 Score=147.46 Aligned_cols=194 Identities=16% Similarity=0.101 Sum_probs=129.8
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCCc-HHHHHHHHHHh
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAI 188 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~sG-s~A~~~a~~al 188 (385)
..+++.+++++...+......+|.. ..|.+ ++++.+++++.+. | ++.+ +|..++| ++|+..++.++
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~---~lr~aia~~~~~~-~~~~~~~----~i~~t~G~~~al~~~~~~l 115 (401)
T TIGR01264 47 LPTDPEVMQAMKDSLDSGKYNGYAP---TVGAL---SAREAIASYYHNP-DGPIEAD----DVVLCSGCSHAIEMCIAAL 115 (401)
T ss_pred CCCCHHHHHHHHHHHhccCCCCCCC---CCCCH---HHHHHHHHHHhhc-CCCCCHH----HEEECcChHHHHHHHHHHh
Confidence 4578899999887665432223422 12443 5665555544432 2 3332 3555555 56999999999
Q ss_pred ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~ 265 (385)
++|||+|++.+|.+..+. ..+...|..+..++ ++.+ ++.+|++.+++.++. ++++|+++.++||+ .
T Consensus 116 ~~~gd~v~i~~P~y~~~~--------~~~~~~g~~v~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~ 184 (401)
T TIGR01264 116 ANAGQNILVPRPGFPLYE--------TLAESMGIEVKLYN--LLPDKSWEIDLKQLESLIDE-KTAALIVNNPSNPCGSV 184 (401)
T ss_pred CCCCCEEEEeCCCChhHH--------HHHHHcCCEEEEee--cCCccCCCCCHHHHHHHhcc-CceEEEEcCCCCCCCCC
Confidence 999999999998664432 13345666544444 4433 468999999998864 67999888888774 3
Q ss_pred C---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CC-Cc-EEEECCCcc--CccccEEEEEEeC
Q 016668 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-CD-VVTTTTHKS--LRGPRGGMIFFKK 328 (385)
Q Consensus 266 ~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~g-aD-iv~~S~hK~--l~GprgG~I~~~~ 328 (385)
. ++++|.++|+++|+++++|+++ .++...+....++ .. .. |++.|++|+ ++|.|.|++++.+
T Consensus 185 ~~~~~~~~l~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 185 FSRQHLEEILAVAERQCLPIIADEIY-GDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHD 256 (401)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEhhh-hhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecC
Confidence 3 4888999999999999999996 5665444211122 11 22 678999997 4889999999875
No 177
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.67 E-value=1.9e-14 Score=145.28 Aligned_cols=198 Identities=17% Similarity=0.065 Sum_probs=128.9
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC-cHHHHHHHHHHhc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAIL 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~all 189 (385)
+-++++.+++++...+......+|+. ..|.+ ++++.+++++...+|.+.+ . -+|.+++ +++|+..++.+++
T Consensus 46 ~~~~~~~~~~~~~~~l~~~~~~~Y~~---~~g~~---~lr~~ia~~l~~~~~~~~~-~-~~ii~t~G~t~al~~~~~~l~ 117 (403)
T TIGR01265 46 NLRTDPEAEEAVKDALRSGKFNGYAP---SVGAL---AAREAVAEYLSSDLPGKLT-A-DDVVLTSGCSQAIEICIEALA 117 (403)
T ss_pred CCCCCHHHHHHHHHHHhcCCCCCCCC---CCCCH---HHHHHHHHHHHhhcCCCCC-H-HHEEEecChHHHHHHHHHHhC
Confidence 45678999999987765443334432 22433 4555444444433333211 1 1344555 4679999999999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF 266 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~ 266 (385)
++||+|++.+|.+.++.. .....|..+..++ +++ +++.+|++++++.+.. +++++++..++|| ...
T Consensus 118 ~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v~i~~p~NPtG~~~ 186 (403)
T TIGR01265 118 NPGANILVPRPGFPLYDT--------RAAFSGLEVRLYD--LLPEKDWEIDLDGLEALADE-KTVAIVVINPSNPCGSVF 186 (403)
T ss_pred CCCCEEEEeCCCchhHHH--------HHHHcCCEEEEec--CCcccCCccCHHHHHHHhCc-CccEEEEecCCCCCCCCC
Confidence 999999999987643311 2345565544444 433 3457999999998854 6788888777766 344
Q ss_pred C---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C-CCc-EEEECCCccC--ccccEEEEEEeC
Q 016668 267 D---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 267 d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~-gaD-iv~~S~hK~l--~GprgG~I~~~~ 328 (385)
+ +++|.++|+++|+++++|+++ ..+...+....++ . ... +++.|++|++ +|.|.|++++.+
T Consensus 187 ~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~ 257 (403)
T TIGR01265 187 SRDHLQKIAEVARKLGIPIIADEIY-GHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWIIIHD 257 (403)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEccc-cccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEEEEeC
Confidence 4 789999999999999999996 4555443211122 1 223 5789999984 788999999854
No 178
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.67 E-value=9.9e-15 Score=150.81 Aligned_cols=206 Identities=15% Similarity=0.096 Sum_probs=138.3
Q ss_pred CcHHHHHHHhhHhhccC--CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhc-
Q 016668 114 TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y--~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all- 189 (385)
.|..+++++...+.... ...|+. ..|.+ ++++..++++.+..|.+.+ + -+|..++|+ +|+..++.+++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~~~~~~g~~~~-~-~~I~it~Ga~~al~~~~~~l~~ 160 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGGTGAYTD---SAGYP---FVRKAVAAFIERRDGVPKD-P-SDIFLTDGASSGIKLLLQLLIG 160 (481)
T ss_pred CCHHHHHHHHHHHHhCCCcccCcCc---ccCCH---HHHHHHHHHHHHhcCCCCC-h-hhEEEcCCHHHHHHHHHHHhcc
Confidence 46677887765443321 122433 23444 7888788888887776542 1 256677776 59999999998
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYP 263 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~~ 263 (385)
+|||.|++.+|.|.++.. .+...|..+. +++++++ ++.+|++++++.++.. ++|+|++..++||
T Consensus 161 ~~gD~Vlv~~P~y~~y~~--------~~~~~g~~~v--~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NP 230 (481)
T PTZ00377 161 DPSDGVMIPIPQYPLYSA--------AITLLGGKQV--PYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNP 230 (481)
T ss_pred CCCCEEEECCCCchhHHH--------HHHHcCCEEE--EEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 799999999997755432 3456666544 4445544 3489999999988542 6888877777776
Q ss_pred --CCCC---HHHHHHHHHHcCcEEEEeccccccccccC--cccCC------CC-C---C-c-EEEECCCccC---ccccE
Q 016668 264 --RDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS--VVADP------FK-Y---C-D-VVTTTTHKSL---RGPRG 321 (385)
Q Consensus 264 --~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g--~~~~p------~~-g---a-D-iv~~S~hK~l---~Gprg 321 (385)
...+ +++|+++|+++|++||+|+++ ..+++.+ .+++. +. . . . +++.|++|++ +|+|.
T Consensus 231 TG~~~s~e~~~~i~~~a~~~~~~iI~De~Y-~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 231 TGQVLTRDVMEEIIKFCYEKGIVLMADEVY-QENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhh-HhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 3444 788999999999999999997 4555422 12221 11 1 1 2 5678999974 69999
Q ss_pred EEEEE---eCCCCchhHHHHHHhhcc
Q 016668 322 GMIFF---KKDPVLGVELESAINNAV 344 (385)
Q Consensus 322 G~I~~---~~~~~~~~~~~~~i~~~~ 344 (385)
||+++ ++ ++.+++....
T Consensus 310 G~~~~~~~p~------~li~~l~~~~ 329 (481)
T PTZ00377 310 GYFELTNIPP------EVREQIYKLA 329 (481)
T ss_pred EEEEEeCCCH------HHHHHHHHHh
Confidence 99987 44 6777776544
No 179
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.67 E-value=6.7e-16 Score=156.84 Aligned_cols=160 Identities=21% Similarity=0.169 Sum_probs=118.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..++||+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++..... ...+...|
T Consensus 55 ~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~----~~~~~~~G 121 (418)
T TIGR01326 55 MNPTTDVLEQ----RIAALEGGVA-----ALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLF----KHTLKRLG 121 (418)
T ss_pred CChhHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHH----HHHHHHcC
Confidence 5566666665 6889999865 477899999999999999999999999988776532210 01223456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+. .++. .|++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|+++++|++++.+. ..
T Consensus 122 ~~v~--~v~~------~d~~~l~~~l~~-~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~-----~~ 187 (418)
T TIGR01326 122 IEVR--FVDP------DDPEEFEKAIDE-NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPY-----LC 187 (418)
T ss_pred cEEE--EECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhh-----cC
Confidence 5443 3322 289999999865 7899999877776 56799999999999999999999987553 23
Q ss_pred CCCC-CCcEEEECCCccCcc--ccEEEEEEeC
Q 016668 300 DPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~G--prgG~I~~~~ 328 (385)
.+++ ++|++++|+||++.| .+.|+++.++
T Consensus 188 ~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 188 RPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred CchhcCCeEEEECccccccCCccceEEEEEec
Confidence 4555 799999999999865 4445555543
No 180
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.67 E-value=1.3e-15 Score=152.83 Aligned_cols=226 Identities=15% Similarity=0.065 Sum_probs=146.8
Q ss_pred ccccccCCCCCcHH-HHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeec-CCcHHHH
Q 016668 104 SLELIASENFTSRA-VMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPAN 181 (385)
Q Consensus 104 ~l~Liasen~~s~~-V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~-~sGs~A~ 181 (385)
.+.++++...+++. |++++...+.. .. +.+.++.+.++ .+++.++++||++.. +.+ +++ .|||.++
T Consensus 13 ~~~f~~Gp~~~~~~~v~~a~~~~~~~------~~---hr~~~f~~~~~-~~r~~l~~l~~~~~~-~~v-~~~~gs~T~~~ 80 (378)
T PRK03080 13 DPRFSSGPCKKRPGWQLEALADALLG------RS---HRQKPVKALLK-RVIEGTRELLSLPEG-YEV-GIVPGSDTGAW 80 (378)
T ss_pred CCCcCCCCcCCChHHHHHHHHhhhcc------cC---cCCHHHHHHHH-HHHHHHHHHhCCCCC-ceE-EEECCchHHHH
Confidence 46677777788888 99998754321 11 11335554454 589999999998532 213 334 4788999
Q ss_pred HHHHHHhccC-CCEEeecCCCCCccccCCccccccccccCcc-eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc-
Q 016668 182 FEVYTAILKP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG- 258 (385)
Q Consensus 182 ~~a~~all~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~- 258 (385)
.+++.+++++ ++.|+. +-+|+. .+.. ...+..|. .++.++. + .++.+|+++++. +|+|.+.
T Consensus 81 ~~~~~~l~~~~~~~vi~-~g~f~~----~~~~--~~~~~~g~~~v~~~~~--~-~g~~~d~~~i~~------~~~V~~~h 144 (378)
T PRK03080 81 EMALWSLLGARRVDHLA-WESFGS----KWAT--DVVKQLKLEDPRVLEA--D-YGSLPDLSAVDF------DRDVVFTW 144 (378)
T ss_pred HHHHHhcCCCCcceEEE-eCHHHH----HHHH--HHHhhcCCCCceEecc--C-CCCCCCHhhcCC------CCCEEEEe
Confidence 9999999885 455554 434433 2210 01123455 5555553 3 345788777432 4555543
Q ss_pred -CCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHH
Q 016668 259 -ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (385)
Q Consensus 259 -~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~ 336 (385)
.+.+|...|+++|++ +++|+++++|++|+.|.. +-.++.+|++++|.||||.||.| |+++.+++ .
T Consensus 145 ~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~-----pidv~~iD~~~~s~~K~l~~P~G~g~l~v~~~------~ 211 (378)
T PRK03080 145 NGTTTGVRVPVARWIG--ADREGLTICDATSAAFAL-----PLDWSKLDVYTFSWQKVLGGEGGHGMAILSPR------A 211 (378)
T ss_pred cCCccceeccchhhcc--ccCCCeEEEecccccccC-----CCCHHHCcEEEEehhhhCCCCCceEEEEECHH------H
Confidence 345688899999999 889999999999988754 22333689999999999999988 88888874 3
Q ss_pred HHHHhhc---------------------cC-CCccCCChHHHHHHHHHHHHHhhCc
Q 016668 337 ESAINNA---------------------VF-PGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 337 ~~~i~~~---------------------~f-p~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
.+++... .| .+..++|....+.++..|++.+.+.
T Consensus 212 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~ 267 (378)
T PRK03080 212 VERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSI 267 (378)
T ss_pred HHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHc
Confidence 3332210 01 1233457777888889999988775
No 181
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.67 E-value=7.5e-16 Score=154.62 Aligned_cols=172 Identities=17% Similarity=0.155 Sum_probs=122.8
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|-+.|. |++.+++||+ +++++.|.++ .|.+.||+.|+.+++.++++|||+|+++...||+.....
T Consensus 55 ~~~Y~r~--~~P~~~~lE~----~la~leg~~~-----av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~--- 120 (384)
T PRK06434 55 PYIYTRW--GNPTVQAFEE----KYAVLENAEH-----ALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFF--- 120 (384)
T ss_pred CcceeCC--CChhHHHHHH----HHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHH---
Confidence 3444444 7898899887 5888999987 478899999999999999999999999876666543210
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
...+...|..+. .+++++. ..++ +...++|+|++..+.+| ...|+++|.++|+++| +++|+++++
T Consensus 121 -~~~~~~~Gi~v~--fvd~~~~-~~~~-------l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s 187 (384)
T PRK06434 121 -NKVLKTLGIHVD--YIDTDRL-NSLD-------FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFAS 187 (384)
T ss_pred -HHHHHhcCcEEE--EECCCCh-hhee-------ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCC
Confidence 012344565444 4334321 1122 22236899999877665 5789999999999999 467999854
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
++ ...|++ ++|++++|.||++.|+. ||+|+++++ ++.+++.
T Consensus 188 ~~-----~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~-----~~~~~~~ 232 (384)
T PRK06434 188 PY-----NQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNK-----SIFNNLV 232 (384)
T ss_pred cc-----cCCchhcCCCEEEeecccccCCCCCceEEEEecCcH-----HHHHHHH
Confidence 42 235677 89999999999998865 788888775 5666554
No 182
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.2e-15 Score=155.35 Aligned_cols=158 Identities=24% Similarity=0.272 Sum_probs=119.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+.||+ .+++++|.+. .+.+.||+.|+.+++.++++|||+|++.++.|++.... + . ..+...|
T Consensus 61 ~~p~~~~le~----~lA~l~g~~~-----al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~-~-~--~~~~~~G 127 (427)
T PRK05994 61 TNPTNAVLEE----RVAALEGGTA-----ALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQ-F-G--HAFKSFG 127 (427)
T ss_pred CCccHHHHHH----HHHHHhCCCc-----EEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHH-H-H--HHHHhcC
Confidence 4455566665 6889999886 46789999999999999999999999998877664220 0 0 0123345
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+ ..++. .|++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|++|+.++. .
T Consensus 128 ~~v--~~vd~------~d~~~l~~ai~~-~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~-----~ 193 (427)
T PRK05994 128 WQV--RWADA------DDPASFERAITP-RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYL-----I 193 (427)
T ss_pred cEE--EEECC------CCHHHHHHhcCc-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcccccc-----C
Confidence 533 33222 388999998865 7899999877665 578999999999999999999999976543 3
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEE
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFF 326 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~ 326 (385)
.|++ ++|+++.|+||++.|+. ||+++.
T Consensus 194 ~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~ 224 (427)
T PRK05994 194 RPIEHGADIVVHSLTKFLGGHGNSMGGIIVD 224 (427)
T ss_pred CccccCCcEEEEcCccccCCCCCcEEEEEEe
Confidence 5666 89999999999997764 566654
No 183
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.67 E-value=6.3e-15 Score=150.03 Aligned_cols=195 Identities=11% Similarity=0.064 Sum_probs=127.6
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHD 193 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD 193 (385)
.|.+.+++....... ..|+. ..|.+ ++++...+++.+..+.+. +|..++|+ +|+..++.++++|||
T Consensus 100 ~p~~~~~~~~~~~~~--~~Y~~---~~g~~---~lr~~ia~~~~~~~~~~~-----~Iiit~G~~~al~~~~~~l~~pgd 166 (431)
T PRK15481 100 LPDLSRYFARLSRTP--RLYGD---APVSP---ELHAWAARWLRDDCPVAF-----EIDLTSGAIDAIERLLCAHLLPGD 166 (431)
T ss_pred hHHHHHHHHHhhhhh--hhcCC---cCCCH---HHHHHHHHHHhhccCCcC-----eEEEecCcHHHHHHHHHHhCCCCC
Confidence 455666665433221 12333 12433 565554455443332221 46666665 599999999999999
Q ss_pred EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCC--CCCCH--
Q 016668 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYP--RDFDY-- 268 (385)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~-~s~~~--~~~dl-- 268 (385)
.|++.+|.|.++.. .+...|..+..+ ++++ + .+|++++++.++. ++|+|++. .++|| ..++.
T Consensus 167 ~Vlv~~P~y~~~~~--------~~~~~g~~~~~v--~~~~-~-g~~~~~l~~~~~~-~~k~i~~~p~p~NPTG~~~s~~~ 233 (431)
T PRK15481 167 SVAVEDPCFLSSIN--------MLRYAGFSASPV--SVDA-E-GMQPEKLERALAQ-GARAVILTPRAHNPTGCSLSARR 233 (431)
T ss_pred EEEEeCCCcHHHHH--------HHHHcCCeEEee--ccCC-C-CCCHHHHHHHHhc-CCCEEEECCCCCCCCCccCCHHH
Confidence 99999997765432 345667654444 4553 2 4899999998865 78988876 67777 45554
Q ss_pred -HHHHHHHHHc-CcEEEEeccccccccccCcccCCCC-CCc--EEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 269 -PRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YCD--VVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 269 -~~I~~ia~~~-ga~livD~ah~~Gli~~g~~~~p~~-gaD--iv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
++|.++|+++ +++|++|+++ ..+...+ .+.++. ..+ +++.|++|+| +|.|.|+++.++ ++.+.+..
T Consensus 234 ~~~l~~la~~~~~~~ii~De~Y-~~~~~~~-~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~------~~~~~~~~ 305 (431)
T PRK15481 234 AAALRNLLARYPQVLVIIDDHF-ALLSSSP-YHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDS------ATSARLRL 305 (431)
T ss_pred HHHHHHHHHhcCCceEEecCch-hhhccCC-CCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCH------HHHHHHHH
Confidence 4899999999 9999999986 4444322 223333 122 7889999998 778999999887 56676654
Q ss_pred c
Q 016668 343 A 343 (385)
Q Consensus 343 ~ 343 (385)
.
T Consensus 306 ~ 306 (431)
T PRK15481 306 R 306 (431)
T ss_pred H
Confidence 3
No 184
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1e-15 Score=156.08 Aligned_cols=160 Identities=21% Similarity=0.208 Sum_probs=118.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+.||+ ++++++|.+. .+.+.||+.|+.+++.++++|||+|++.+..|++... .. ...+...|
T Consensus 67 ~~p~~~~Le~----~lA~l~g~~~-----av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~--~~--~~~l~~~G 133 (436)
T PRK07812 67 MNPTQDVVEQ----RIAALEGGVA-----ALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYN--LF--HYTLPKLG 133 (436)
T ss_pred CCchHHHHHH----HHHHHhCCCe-----EEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHH--HH--HHHhhcCe
Confidence 5676777775 6889999987 3778899999999999999999999998877765321 00 00122334
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
. ++..++ + ..|++++++.+++ ++|+|++..+++| ...|+++|.++|+++|+++++|++|..++. +
T Consensus 134 i--~v~~vd-d----~~d~e~l~~ai~~-~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~-----~ 200 (436)
T PRK07812 134 I--EVSFVE-D----PDDLDAWRAAVRP-NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYL-----I 200 (436)
T ss_pred E--EEEEEC-C----CCCHHHHHHhCCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 3 333322 2 1389999998864 7899988776654 678999999999999999999999976543 3
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEe
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 327 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~ 327 (385)
.+++ |+|+++.|+||++.|+. +|.++.+
T Consensus 201 ~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 201 RPLEHGADIVVHSATKYLGGHGTAIAGVIVDG 232 (436)
T ss_pred CchhcCCCEEEEecccccCCCCCeEEEEEEcC
Confidence 5666 89999999999997764 3555543
No 185
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.67 E-value=2.8e-15 Score=147.68 Aligned_cols=197 Identities=18% Similarity=0.152 Sum_probs=133.2
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhc
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all 189 (385)
+..+++.+++++....... ..|+.. .+ .++ ++.+++++|++.+ +|.+++|+ .++..++.+++
T Consensus 30 ~~~~~~~~~~a~~~~~~~~--~~y~~~---~~----~~l----r~~ia~~~~~~~~----~i~~~~G~~~~l~~~~~~l~ 92 (346)
T TIGR01141 30 PFGPPPKAKEALRAEADKL--HRYPDP---DP----AEL----KQALADYYGVDPE----QILLGNGSDEIIELLIRAFL 92 (346)
T ss_pred CCCCCHHHHHHHHHhHHHh--hcCCCC---CH----HHH----HHHHHHHhCcChH----HEEEcCCHHHHHHHHHHHhc
Confidence 3446888999988764321 233321 11 244 4467888898764 45566665 58888889999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
++||+|++++|.++.+. ......|.++.. +++++ ++.+|++++++.+.. ++++|+++.+++| ...+
T Consensus 93 ~~gd~v~~~~p~y~~~~--------~~~~~~g~~~~~--~~~~~-~~~~d~~~l~~~~~~-~~~~v~l~~p~NptG~~~~ 160 (346)
T TIGR01141 93 EPGDAVLVPPPTYSMYE--------ISAKIHGAEVVK--VPLDE-DGQLDLEDILVAIDD-KPKLVFLCSPNNPTGNLLS 160 (346)
T ss_pred CCCCEEEEcCCCHHHHH--------HHHHHcCCeEEE--eccCC-CCCCCHHHHHHhcCC-CCCEEEEeCCCCCCCCCCC
Confidence 99999999998654321 123455665444 44553 478999999998744 7899988777765 5789
Q ss_pred HHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC-C-CcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHh
Q 016668 268 YPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 268 l~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~-g-aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
.+++.++|+.+ |+++++|++|. ++...+.....+. . .++++.|+||++ +|+|.|++++++ ++.+++.
T Consensus 161 ~~~~~~l~~~~~~~~~ii~D~~y~-~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~ 233 (346)
T TIGR01141 161 RSDIEAVLERTPEDALVVVDEAYG-EFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA------EIIDALN 233 (346)
T ss_pred HHHHHHHHHhCCCCcEEEEECchh-hhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH------HHHHHHH
Confidence 99999999887 99999999985 4332211111111 2 237789999997 577889999876 6777776
Q ss_pred hc
Q 016668 342 NA 343 (385)
Q Consensus 342 ~~ 343 (385)
..
T Consensus 234 ~~ 235 (346)
T TIGR01141 234 KV 235 (346)
T ss_pred hc
Confidence 54
No 186
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.66 E-value=1.2e-15 Score=149.93 Aligned_cols=171 Identities=19% Similarity=0.139 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcHHHHHHHHHHhcc------------CC--CEEeecCCCCCccccC
Q 016668 144 EYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK------------PH--DRIMGLDLPHGGHLSH 208 (385)
Q Consensus 144 ~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs~A~~~a~~all~------------pG--D~Vl~~~~~~ggh~s~ 208 (385)
+...++|+.+++++++++|.+ ... ..+++++||.||+.++.++.. +| +.|+++++.|.++.
T Consensus 34 ~~~~~le~~~~~~~~~~~g~~~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~-- 109 (345)
T cd06450 34 PAATEMEAEVVNWLAKLFGLPSEDA--DGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVE-- 109 (345)
T ss_pred chhHHHHHHHHHHHHHHhCCCCCCC--CEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHH--
Confidence 345689999999999999997 222 245677788899999888743 33 36777776543321
Q ss_pred CccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCC--CCCCCCHHHHHHHHHHcCcE
Q 016668 209 GFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASA--YPRDFDYPRMRQIADAVGAL 281 (385)
Q Consensus 209 ~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~--~~~~~dl~~I~~ia~~~ga~ 281 (385)
..+...|..+..++ +++ ++.+|+++|++.+++. ++++|++..++ ++...|+++|.++|+++|++
T Consensus 110 ------~~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~ 180 (345)
T cd06450 110 ------KAAAYLDVKVRLVP--VDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLW 180 (345)
T ss_pred ------HHHHHHhcCeEEee--eCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCe
Confidence 12334465544444 553 4589999999998641 57777665443 46778999999999999999
Q ss_pred EEEeccccccccccCccc---CCCCCCcEEEECCCccCccccE-EEEEEe
Q 016668 282 LMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFK 327 (385)
Q Consensus 282 livD~ah~~Gli~~g~~~---~p~~gaDiv~~S~hK~l~Gprg-G~I~~~ 327 (385)
+++|++|..+........ ..+.++|++++|+||++.+|.| |+++.+
T Consensus 181 l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~ 230 (345)
T cd06450 181 LHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR 230 (345)
T ss_pred EEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH
Confidence 999999976653211111 1123689999999999877754 655433
No 187
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.66 E-value=2.6e-14 Score=145.43 Aligned_cols=183 Identities=14% Similarity=0.083 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhc--c-CCCEEeecCCCCCccccCCccccccccccCc
Q 016668 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAIL--K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 146 ~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all--~-pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
.-.+.+...+++++++|++.... .+.+.+|| .++..++.++- + +||+|+++... |.+. .+.+.+.|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~--a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t---h~S~-----~kAi~~~G 172 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKS--AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID---QKSC-----IKAISTAG 172 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCE--EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC---hHHH-----HHHHHHcC
Confidence 44566677788999999983211 34556777 47777766653 2 69999988753 3332 14567888
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCC-C--CCCCHHHHHHHHHHcCcEEEEeccccccccccC
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAY-P--RDFDYPRMRQIADAVGALLMMDMAHISGLVAAS 296 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~-~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g 296 (385)
.....++..++++++.+|+++|++.+++. +.++++++.+++ + ...|+++|.++|+++|+++++|+||+.+.....
T Consensus 173 ~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~ 252 (444)
T TIGR03531 173 FEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYM 252 (444)
T ss_pred CeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhh
Confidence 86666553345567899999999999752 334555554443 2 467999999999999999999999975432211
Q ss_pred ccc-CCCC--CCcEEEECCCccCccc-cEEEEEEeCCCCchhHHHHHHhhc
Q 016668 297 VVA-DPFK--YCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 297 ~~~-~p~~--gaDiv~~S~hK~l~Gp-rgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
... ..++ .+|++++|+||++..| .||+|+++++ ++.+.+...
T Consensus 253 ~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~-----el~~~i~~~ 298 (444)
T TIGR03531 253 ELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDE-----NFIQEISKS 298 (444)
T ss_pred hhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCH-----HHHHHHHHh
Confidence 111 1222 3799999999998765 3677878776 777777653
No 188
>PRK09265 aminotransferase AlaT; Validated
Probab=99.66 E-value=2.6e-14 Score=144.22 Aligned_cols=190 Identities=15% Similarity=0.077 Sum_probs=126.6
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc--CCCCCCCcceeecCCcHH-HHHHHHHHhcc
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF--NLDENKWGVNVQPLSGSP-ANFEVYTAILK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lf--g~~~~~~~~~V~~~sGs~-A~~~a~~all~ 190 (385)
+++.+.+++...+.. ..+|+. ..|.+ ++++..++++.... +++.+ +|.+++|+. ++..++.++++
T Consensus 50 ~~~~i~~~~~~~~~~--~~~Y~~---~~G~~---~lr~~ia~~~~~~~~~~~~~~----~i~~t~G~~~~l~~~~~~~~~ 117 (404)
T PRK09265 50 APDEILRDVIRNLPT--AQGYSD---SKGLF---SARKAIMQYYQQKGIPDVDVD----DIYIGNGVSELIVMAMQALLN 117 (404)
T ss_pred CCHHHHHHHHHHhhc--CCCCCC---CCCcH---HHHHHHHHHHhccCCCCCCcc----cEEEeCChHHHHHHHHHHhCC
Confidence 678888888765542 234554 23443 56555444443322 45553 566677765 78888999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
|||+|++.+|.|..+.. .+...|.....++ .+.+ ++.+|++++++.+.. ++|+|++..++|| ...+
T Consensus 118 ~gd~Vlv~~p~y~~~~~--------~~~~~g~~~v~~~--~~~~~~~~~d~~~l~~~~~~-~~~~v~l~~P~NPtG~~~~ 186 (404)
T PRK09265 118 NGDEVLVPAPDYPLWTA--------AVSLSGGKPVHYL--CDEEAGWFPDLDDIRSKITP-RTKAIVIINPNNPTGAVYS 186 (404)
T ss_pred CCCEEEEeCCCCcChHH--------HHHHcCCEEEEEe--cccccCCCCCHHHHHHhccc-cceEEEEECCCCCCCcCCC
Confidence 99999999987754321 2234555433333 4432 457999999998854 7898887777766 4566
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C-CCc-EEEECCCccC--ccccEEEEEEe
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~-gaD-iv~~S~hK~l--~GprgG~I~~~ 327 (385)
+++|.++|+++|+++++|+++ .++.+.+....++ . ... +++.|++|++ +|.|.|+++..
T Consensus 187 ~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~ 255 (404)
T PRK09265 187 KELLEEIVEIARQHNLIIFADEIY-DKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLS 255 (404)
T ss_pred HHHHHHHHHHHHHCCCEEEEehhh-hhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEe
Confidence 888999999999999999997 4555443221122 1 223 4678999997 68899999864
No 189
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.66 E-value=2e-14 Score=139.97 Aligned_cols=213 Identities=17% Similarity=0.126 Sum_probs=134.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEE
Q 016668 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (385)
Q Consensus 146 ~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (385)
.+++++..++++...+|...... ..+.+.+|+.++..++.++.++||+|+++++.|.++.. .+...|..+.
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~--------~~~~~~~~~~ 108 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPE-EIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYEA--------AARLAGAEVV 108 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc-eEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEE
Confidence 34777777777777666321111 13445566789999999999999999999876654421 3345555444
Q ss_pred EEeccccCCCCCCCH--HHHHHHhhhcCCcEEEEcCCCC--CCCCCHH---HHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 226 SMPYRLDESTGLVDY--DMLEKTAILFRPKLIIAGASAY--PRDFDYP---RMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 226 ~i~~~~~~~~~~iD~--d~le~~i~~~~pklIi~~~s~~--~~~~dl~---~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
.++ .++ ++..+. +.+++... .++++|++..+++ |...|++ +|.++|+++|+++++|++|+.+. ..+..
T Consensus 109 ~i~--~~~-~~~~~~~~~~~~~~~~-~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~-~~~~~ 183 (350)
T cd00609 109 PVP--LDE-EGGFLLDLELLEAAKT-PKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELV-YDGEP 183 (350)
T ss_pred EEe--ccc-ccCCccCHHHHHhhcC-ccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhce-eCCcc
Confidence 444 442 333333 55655543 4788888866654 4556654 55589999999999999985443 22222
Q ss_pred c----CCCC-CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCch
Q 016668 299 A----DPFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 299 ~----~p~~-gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~ 371 (385)
+ ..-. +.|+++.|+||++ +|++.|+++++++ ++.+.+...... ..++++.....++..+++... .+
T Consensus 184 ~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~ 256 (350)
T cd00609 184 PPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-----ELLERLKKLLPY-TTSGPSTLSQAAAAAALDDGE-EH 256 (350)
T ss_pred cccccCcCccCcEEEEeecccccCCcccceEEEecCHH-----HHHHHHHHHHHh-cccCCChHHHHHHHHHHhCcH-HH
Confidence 1 1112 5789999999998 4678899999884 466666554322 234566677777777776543 33
Q ss_pred HHHHHHHH
Q 016668 372 FKVYQNKS 379 (385)
Q Consensus 372 ~~~y~~~v 379 (385)
+++.++++
T Consensus 257 ~~~~~~~~ 264 (350)
T cd00609 257 LEELRERY 264 (350)
T ss_pred HHHHHHHH
Confidence 44444443
No 190
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.66 E-value=9.4e-15 Score=138.33 Aligned_cols=238 Identities=17% Similarity=0.132 Sum_probs=169.6
Q ss_pred ccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHH
Q 016668 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (385)
Q Consensus 106 ~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~ 185 (385)
-++|.+.-+|+.|++|+... ..|+.. +..-+|-+...+-++..|....+. ..++..+|+.|+.+++
T Consensus 20 L~gPGPsnl~~~V~~A~~~~-----~lgh~s-------Pe~~qIm~~v~egikyVFkT~n~~--tf~isgsGh~g~E~al 85 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRP-----SLGHMS-------PEFVQIMDEVLEGIKYVFKTANAQ--TFVISGSGHSGWEAAL 85 (385)
T ss_pred eecCCCcCCCHHHHHhhcCC-----ccccCC-------HHHHHHHHHHHHHHHHHhccCCCc--eEEEecCCcchHHHHH
Confidence 56788889999999998633 334333 222245555667788999988754 4678889999999999
Q ss_pred HHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEE--cCCCCC
Q 016668 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIA--GASAYP 263 (385)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~--~~s~~~ 263 (385)
..++.|||+|++... |..++.+. ...+..|..+.+++.+. .....++++++.+..++|++|.+ +.++++
T Consensus 86 ~N~lePgd~vLv~~~---G~wg~ra~---D~~~r~ga~V~~v~~~~---G~~~~le~i~~~lsqh~p~~vfv~hgdsSTg 156 (385)
T KOG2862|consen 86 VNLLEPGDNVLVVST---GTWGQRAA---DCARRYGAEVDVVEADI---GQAVPLEEITEKLSQHKPKAVFVTHGDSSTG 156 (385)
T ss_pred HhhcCCCCeEEEEEe---chHHHHHH---HHHHhhCceeeEEecCc---ccCccHHHHHHHHHhcCCceEEEEecCcccc
Confidence 999999999998753 55554431 23467788777776332 45789999999998899999866 456788
Q ss_pred CCCC-HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHH---
Q 016668 264 RDFD-YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL--- 336 (385)
Q Consensus 264 ~~~d-l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~--- 336 (385)
...| ++.+.++|++|++++++|..-+.|-. +--++ ++|+..+..+|.|.+|.| +.|...+.. ++.+
T Consensus 157 V~q~~~~~~g~lc~k~~~lllVD~VaSlggt-----~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka--~~~~~~r 229 (385)
T KOG2862|consen 157 VLQDLLAISGELCHKHEALLLVDTVASLGGT-----EFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKA--LEAIRDR 229 (385)
T ss_pred ccchHHHHHHHHhhcCCeEEEEechhhcCCc-----cceehhhcccEEEecchhhcCCCCCcceeecCHHH--HHHHhhc
Confidence 8888 67788999999999999987655421 22233 899999999999999999 666555431 0111
Q ss_pred --------HHHHhhccCCCc-------cCCChHHHHHHHHHHHHHhhCchHH
Q 016668 337 --------ESAINNAVFPGL-------QGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 337 --------~~~i~~~~fp~~-------qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.+.++...|.+. .-+|....+.+|-+||+++.+++.+
T Consensus 230 K~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~ 281 (385)
T KOG2862|consen 230 KTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLE 281 (385)
T ss_pred cCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 111222223222 2357788999999999999877764
No 191
>PRK10534 L-threonine aldolase; Provisional
Probab=99.66 E-value=3.7e-15 Score=146.15 Aligned_cols=200 Identities=16% Similarity=0.164 Sum_probs=128.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD 193 (385)
+||.+++++....... .+ |+..+...+||+ .+++++|.+. .+.+.+|+.++..++.++++|||
T Consensus 12 p~~~~~~a~~~~~~~~-------~~-Y~~~~~~~~L~~----~la~~~g~~~-----~~v~~~g~~a~~~~l~~~~~~gd 74 (333)
T PRK10534 12 PSRAMLEAMMAAPVGD-------DV-YGDDPTVNALQD----YAAELSGKEA-----ALFLPTGTQANLVALLSHCERGE 74 (333)
T ss_pred CCHHHHHHHHhccCCC-------cc-cCCCHHHHHHHH----HHHHHhCCCe-----EEEeCchHHHHHHHHHHhcCCCC
Confidence 6899999986433221 11 323344456665 5788899977 25677888899989999999999
Q ss_pred EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCCCCCH
Q 016668 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPRDFDY 268 (385)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~~~~~dl 268 (385)
+|+++.+.|... +.. ......+ ..+.++++++ +++.+|+++|++.+.+. ++|+|+++++++|...+.
T Consensus 75 ~vi~~~~~~~~~--~~~----~~~~~~~-~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~ 146 (333)
T PRK10534 75 EYIVGQAAHNYL--YEA----GGAAVLG-SIQPQPIDAA-ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPR 146 (333)
T ss_pred eeEEechhhhhH--hcC----CchHHhc-CceEEeecCC-CCCCCCHHHHHHhhcccCcCcccceEEEEecCCCCeecCH
Confidence 999876644211 100 0011222 1234444454 35789999999988542 578998888888877765
Q ss_pred H---HHHHHHHHcCcEEEEecccccccccc-CcccCCC-CCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 269 P---RMRQIADAVGALLMMDMAHISGLVAA-SVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 269 ~---~I~~ia~~~ga~livD~ah~~Gli~~-g~~~~p~-~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+ +|.++|+++|++|++|+||..+-... +.....+ .+.|.++.|+||.++.+.||++++++ ++.+.+...
T Consensus 147 ~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~~G~~~~~~~------~~i~~~~~~ 220 (333)
T PRK10534 147 EYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNR------DYIKRARRW 220 (333)
T ss_pred HHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCcccceEEcCH------HHHHHHHHH
Confidence 5 55678899999999999975321110 1111111 24576667899988766666787776 566766554
Q ss_pred c
Q 016668 344 V 344 (385)
Q Consensus 344 ~ 344 (385)
.
T Consensus 221 ~ 221 (333)
T PRK10534 221 R 221 (333)
T ss_pred H
Confidence 3
No 192
>PRK07049 methionine gamma-lyase; Validated
Probab=99.66 E-value=3.6e-15 Score=151.84 Aligned_cols=170 Identities=18% Similarity=0.188 Sum_probs=123.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++....||+ .+++++|.+. .+.+.||+.|+..++.++++|||+|++.+|.|+++.... ...+...|
T Consensus 81 ~~Pt~~~Le~----~lA~leg~~~-----~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~----~~~l~~~G 147 (427)
T PRK07049 81 NHPNSEIVED----RLAVYEGAES-----AALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLL----AKTFRNFG 147 (427)
T ss_pred CCcCHHHHHH----HHHHHhCCCc-----EEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHH----HHHHHhcC
Confidence 4565667775 5788999775 467889999999999999999999999999887753210 00123345
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhh----hcCCcEEEEcCCCCC--CCCCHHHHHHHHHH------cCcEEEEecccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAI----LFRPKLIIAGASAYP--RDFDYPRMRQIADA------VGALLMMDMAHI 289 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~----~~~pklIi~~~s~~~--~~~dl~~I~~ia~~------~ga~livD~ah~ 289 (385)
.. .+.+. + ..|++++++.+. ..++|+|+++.++|| ...|+++|.+++++ +++++++|+++.
T Consensus 148 i~--~v~~~-~----~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~ 220 (427)
T PRK07049 148 VG--AVGFA-D----GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLL 220 (427)
T ss_pred cE--EEEEe-C----CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcc
Confidence 43 33332 1 257778876664 236899999988887 56899999999988 799999999964
Q ss_pred ccccccCcccCCCC-CCcEEEECCCccCcc---ccEEEEEEeCCCCchhHHHHHHhh
Q 016668 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 290 ~Gli~~g~~~~p~~-gaDiv~~S~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
..+ ...|++ ++|+++.|++|++.| .++|+++.++ ++.+++..
T Consensus 221 ~~~-----~~~pl~~g~divv~S~SK~~gG~~glr~G~vv~~~------~l~~~l~~ 266 (427)
T PRK07049 221 GPV-----FQKPLEHGADLSVYSLTKYVGGHSDLVAGAVLGRK------ALIRQVRA 266 (427)
T ss_pred ccc-----cCCccccCCCEEEEcCceeecCCCCcEEEEEECCH------HHHHHHHH
Confidence 322 234556 789999999999874 4889998876 56666654
No 193
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.65 E-value=4.3e-15 Score=147.24 Aligned_cols=209 Identities=18% Similarity=0.150 Sum_probs=142.4
Q ss_pred hccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-
Q 016668 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP- 179 (385)
Q Consensus 103 ~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~- 179 (385)
.-++|-..+| .+++.+++++.+.+......+|+.. |. .+++ +.+++++|.+.. .+|.+++|+.
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----~~---~~lr----~~ia~~~~~~~~---~~I~~t~G~~~ 92 (356)
T PRK04870 27 GMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP----RA---AALK----AALRAAMGVPAG---ADVLLGNGSDE 92 (356)
T ss_pred CceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC----CH---HHHH----HHHHHHhCcCCC---CcEEEcCCHHH
Confidence 3455555555 4689999999877643222345531 22 2444 457778887642 2567788875
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
++..++.++++|||+|++.+|.+.++.. .+...|..+. +++++ +++.+|++++++.+...++|+|+++.
T Consensus 93 ~i~~~~~~~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~--~i~~~-~~~~~d~~~l~~~~~~~~~~~v~l~~ 161 (356)
T PRK04870 93 LIQLLALACAKPGATVLAPEPGFVMYRM--------SAKLAGLEFV--GVPLT-ADFTLDLPAMLAAIAEHRPALVFLAY 161 (356)
T ss_pred HHHHHHHHhcCCCCEEEECCCCHHHHHH--------HHHHcCCEEE--EecCC-CCCCCCHHHHHHHhhcCCCCEEEEcC
Confidence 8888888889999999999986654321 3346676544 44455 35789999999998655789998887
Q ss_pred CCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc-EEEECCCcc-CccccEEEEEEeCCCCchh
Q 016668 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKS-LRGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 260 s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD-iv~~S~hK~-l~GprgG~I~~~~~~~~~~ 334 (385)
++|| ...+.+++.++++..+.++|+|+++. .+......+ .+. ... +++.|++|. ++|.|.|++++++
T Consensus 162 p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~-~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~GlRiG~~i~~~------ 233 (356)
T PRK04870 162 PNNPTGNLFDDADVERIIEAAPGLVVVDEAYQ-PFAGDSWLP-RLARFPNLLVMRTVSKLGLAGLRLGYLAGHP------ 233 (356)
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCEEEEECCch-hhcCcchHH-HHhhCCCEEEEecchhhhhHHHhhhhhhCCH------
Confidence 7776 57788888888887799999999973 333211111 122 223 689999993 3788999999877
Q ss_pred HHHHHHhhcc
Q 016668 335 ELESAINNAV 344 (385)
Q Consensus 335 ~~~~~i~~~~ 344 (385)
++.+++....
T Consensus 234 ~~i~~~~~~~ 243 (356)
T PRK04870 234 AWIAELDKVR 243 (356)
T ss_pred HHHHHHHHcc
Confidence 5777776543
No 194
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.65 E-value=2.6e-15 Score=164.54 Aligned_cols=164 Identities=20% Similarity=0.173 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHH---HHHHHHHHhccC-CC----EEeecCCCCCccccCCcccccccccc
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP---ANFEVYTAILKP-HD----RIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~---A~~~a~~all~p-GD----~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
++-..+++++++++|.+. +.+++.+|++ |++.++.+++++ || +|+++..+|+.++. .+.+
T Consensus 568 ~~~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a--------~a~~ 635 (993)
T PLN02414 568 EMFEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA--------SAAM 635 (993)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH--------HHHH
Confidence 444458899999999965 5677777754 888888999876 88 89999988876643 3345
Q ss_pred CcceEEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCCC-C-CCCCCHHHHHHHHHHcCcEEEEecccccccccc
Q 016668 220 TSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASA-Y-PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA 295 (385)
Q Consensus 220 ~g~~~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s~-~-~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~ 295 (385)
.|.++..++ .+ ++|.+|+++|++++++ .++++|++..++ . +...|+++|+++||++|+++++|++|..++..
T Consensus 636 ~G~~vv~v~--~d-~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~- 711 (993)
T PLN02414 636 CGMKIVVVG--TD-AKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVG- 711 (993)
T ss_pred CCCEEEEec--cC-CCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccC-
Confidence 677666666 44 4689999999999975 246777765544 3 35667999999999999999999999877632
Q ss_pred CcccCCCC-CCcEEEECCCccCccccE------EEEEEeCC
Q 016668 296 SVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKD 329 (385)
Q Consensus 296 g~~~~p~~-gaDiv~~S~hK~l~Gprg------G~I~~~~~ 329 (385)
...|.+ |+||+++|.||+|.||.| |++.+++.
T Consensus 712 --l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~ 750 (993)
T PLN02414 712 --LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH 750 (993)
T ss_pred --cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh
Confidence 224555 899999999999987763 78888774
No 195
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.64 E-value=2.8e-15 Score=149.08 Aligned_cols=236 Identities=14% Similarity=0.115 Sum_probs=143.1
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCC-CCCC---cHHHHHHHHHHHHHHHHHcCCCCCCCcceeec-CCcHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSP 179 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r-~~~G---~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~-~sGs~ 179 (385)
+++.|....+|+.|++++..++.+ +. ++++. +..+ .++.+.++ .+++.++++||++.+ +.+ |++ .|||.
T Consensus 1 ~~~~pGp~~~p~~V~~a~~~~~~~-~~--~~~rg~~~~~~r~~~~~~~~~-~~r~~l~~l~~~~~~-~~v-vf~~gs~T~ 74 (355)
T cd00611 1 INFSAGPAALPEEVLEQAQKELLD-FN--GLGMSVMEMSHRSKDFEAIVN-EAESDLRELLNIPDN-YKV-LFLQGGATG 74 (355)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHhh-cc--cCCccccccCCCCHHHHHHHH-HHHHHHHHHhCCCCC-ceE-EEEcCCchH
Confidence 467889999999999999988754 32 33321 1122 34444555 489999999998432 213 333 44888
Q ss_pred HHHHHHHHhcc---CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCH-HHHHHHhhhcCCcEE
Q 016668 180 ANFEVYTAILK---PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY-DMLEKTAILFRPKLI 255 (385)
Q Consensus 180 A~~~a~~all~---pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~-d~le~~i~~~~pklI 255 (385)
|+.+++.++++ +||.|++. .+.|.+. +.....|..++.++. +++....|. +..+..+. .++|+|
T Consensus 75 a~~~~~~~l~~~~~~~~~i~~g------~~~~~~~---~~a~~~g~~~~~~~~--~~~g~~~~~~~~~~~~~~-~~~~lV 142 (355)
T cd00611 75 QFAAVPLNLLGDKGTADYVVTG------AWSAKAA---KEAKRYGGVVVIVAA--KEEGKYTKIPDVETWDLA-PDAAYV 142 (355)
T ss_pred HHHHHHHhcCCCCCeEEEEECC------HHHHHHH---HHHHhcCCCcEEEec--ccccCCCCCCCHhhcCCC-CCCCEE
Confidence 99999999987 56666542 2222221 112344665666653 211112132 22222233 378988
Q ss_pred EEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchh
Q 016668 256 IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGV 334 (385)
Q Consensus 256 i~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~ 334 (385)
.+....+..-..+ .++++.+|+++++|++|++|.. +-.++..|++++|.||+| ||.| |+++.+++
T Consensus 143 ~~~h~~t~tG~~~---~~i~~~~g~~~~VDa~qs~g~~-----~idv~~~~~~~ss~~K~l-GP~G~g~l~~~~~----- 208 (355)
T cd00611 143 HYCSNETIHGVEF---DEVPDTGGVPLVADMSSNILSR-----PIDVSKFGVIYAGAQKNL-GPAGVTVVIVRKD----- 208 (355)
T ss_pred EEeCCcccccEEc---ceecccCCCeEEEEccccccCC-----CCCHHHhCEEEeeccccc-CCCceEEEEECHH-----
Confidence 7755443321122 2456669999999999988754 223334567778899976 7998 88888774
Q ss_pred HHHHHHhhc-----------cCCCccCCChHHHHHHHHHHHHHhhCc-hHH
Q 016668 335 ELESAINNA-----------VFPGLQGGPHNHTIGGLAVCLKHAQSP-EFK 373 (385)
Q Consensus 335 ~~~~~i~~~-----------~fp~~qg~p~~~~iaala~Al~e~~~~-~~~ 373 (385)
+.+++... ......++|+.+.+.++..|++.+.+. +..
T Consensus 209 -~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e 258 (355)
T cd00611 209 -LLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVE 258 (355)
T ss_pred -HHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHH
Confidence 22221110 001124689999999999999988776 453
No 196
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.64 E-value=7.2e-14 Score=140.29 Aligned_cols=199 Identities=18% Similarity=0.172 Sum_probs=128.6
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCCc-HHHHHHHHHHhc
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAIL 189 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~sG-s~A~~~a~~all 189 (385)
.+++.+.+++..... ...+|+. ..|.+ ++++..++++. ..| ++.+ +|.+++| +.|+..++.+++
T Consensus 43 ~~~~~~~~a~~~~~~--~~~~Y~~---~~g~~---~lr~~ia~~~~-~~~~~~~~~----~i~~t~G~~~al~~~~~~l~ 109 (397)
T PRK07568 43 KTPEVFFEAIKNYDE--EVLAYSH---SQGIP---ELREAFAKYYK-KWGIDVEPD----EILITNGGSEAILFAMMAIC 109 (397)
T ss_pred CCCHHHHHHHHHHhc--CCcCcCC---CCCCH---HHHHHHHHHHH-HhCCCCCcc----eEEEcCChHHHHHHHHHHhc
Confidence 457888888865432 1223443 23443 56655555544 233 3443 4445554 569999999999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC-C-CCHHHHHHHhhhcCCcEEEEcCCCCCC--C
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-L-VDYDMLEKTAILFRPKLIIAGASAYPR--D 265 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~-~-iD~d~le~~i~~~~pklIi~~~s~~~~--~ 265 (385)
+|||+|++++|.+..+.. .....|..+..++ ++.+++ . .|++++++.++. ++|+|++..+++|+ .
T Consensus 110 ~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~g~~~~~~~~l~~~~~~-~~~~v~i~~p~NPtG~~ 178 (397)
T PRK07568 110 DPGDEILVPEPFYANYNG--------FATSAGVKIVPVT--TKIEEGFHLPSKEEIEKLITP-KTKAILISNPGNPTGVV 178 (397)
T ss_pred CCCCEEEEecCCCccHHH--------HHHHcCCEEEEee--cCcccCCCCCCHHHHHHhcCc-cceEEEEECCCCCCCcc
Confidence 999999999886543321 2245566544444 443333 3 478999998864 68888877777663 3
Q ss_pred C---CHHHHHHHHHHcCcEEEEeccccccccccCc-ccCCCC--C-Cc--EEEECCCccC--ccccEEEEEEeCCCCchh
Q 016668 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--Y-CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 266 ~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~~--g-aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~ 334 (385)
. ++++|.++|+++|+++++|+++ .++...+. .++... + .+ +++.|++|++ +|.|.|++++.++
T Consensus 179 ~~~~~~~~i~~~~~~~~~~ii~De~y-~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~----- 252 (397)
T PRK07568 179 YTKEELEMLAEIAKKHDLFLISDEVY-REFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNK----- 252 (397)
T ss_pred CCHHHHHHHHHHHHHCCcEEEEeccc-hhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCH-----
Confidence 3 4789999999999999999996 45554432 222222 2 23 6789999997 5889999998643
Q ss_pred HHHHHHh
Q 016668 335 ELESAIN 341 (385)
Q Consensus 335 ~~~~~i~ 341 (385)
++.+.+.
T Consensus 253 ~~~~~~~ 259 (397)
T PRK07568 253 ELIAAAM 259 (397)
T ss_pred HHHHHHH
Confidence 5655543
No 197
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.64 E-value=1.2e-14 Score=148.80 Aligned_cols=251 Identities=18% Similarity=0.142 Sum_probs=164.1
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
..+..+++.+.+++...+...- +.++ .+. ...++|+.+..++++++|.+... .-+++++||+||+.++.+.
T Consensus 69 ~~~~~~~~~a~~~~~~~~~~nl--~d~~--~~p---~a~~~E~~~v~~l~~l~~~~~~~--~G~~t~GgTean~lal~aa 139 (460)
T COG0076 69 FCPTRVPPVAAELLVSALNKNL--GDPD--ESP---AAAELEERVVNMLSDLLGAPEEA--SGTFTSGGTEANLLALLAA 139 (460)
T ss_pred cCCCCCHHHHHHHHHHHHhhcC--CCcc--cCh---hHHHHHHHHHHHHHHHhCCCCCC--ceEEEcChHHHHHHHHHHH
Confidence 4566667777777776664322 3333 122 34489999999999999996433 3456788899999777654
Q ss_pred cc-----C---CC------EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCc-
Q 016668 189 LK-----P---HD------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK- 253 (385)
Q Consensus 189 l~-----p---GD------~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pk- 253 (385)
-+ . +. +|+++.- +|++. .|.+.+.|.+.+.++ .++.+..+|++++++.+.+.+..
T Consensus 140 r~~~~~~~~~~~~~~~~~P~ii~s~~---aH~s~-----~Kaa~~lG~~~~~v~--~~~~~~~id~~~l~~~i~~~t~~g 209 (460)
T COG0076 140 RERWRKRALAESGKPGGKPNIVCSET---AHFSF-----EKAARYLGLGLRRVP--TVPTDYRIDVDALEEAIDENTIGG 209 (460)
T ss_pred HHHHHHHhhhcccccCCCCeEEecCc---chhHH-----HHHHHHhCCCceeEE--eccCccccCHHHHHHHHHhhccCc
Confidence 11 1 11 5776553 56553 246678888777777 33336799999999999876665
Q ss_pred -EE-EEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCc--cc--CCCCCCcEEEECCCccCccccE-EEEEE
Q 016668 254 -LI-IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV--VA--DPFKYCDVVTTTTHKSLRGPRG-GMIFF 326 (385)
Q Consensus 254 -lI-i~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~--~~--~p~~gaDiv~~S~hK~l~Gprg-G~I~~ 326 (385)
+| +++.+.++..-|+++|.+||+++|+++++|+|.+..+..... .. .-++++|-++.++||++..|.+ |+++.
T Consensus 210 ~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~ 289 (460)
T COG0076 210 VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLF 289 (460)
T ss_pred eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEE
Confidence 44 346667788889999999999999999999996433331111 11 1223789999999999877765 88888
Q ss_pred eCCCCchhHHHHHHhhccCCC---------ccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 327 KKDPVLGVELESAINNAVFPG---------LQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~fp~---------~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
+++. .+.+.+....++. +.++..-...++.-..++.+-.++|++-.++.+++
T Consensus 290 rd~e----~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~ 350 (460)
T COG0076 290 RDEE----ALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLEL 350 (460)
T ss_pred ECHH----HhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHH
Confidence 8861 2333332222111 11222233555555567666667777777766654
No 198
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=7.3e-15 Score=145.13 Aligned_cols=200 Identities=22% Similarity=0.205 Sum_probs=134.5
Q ss_pred ccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HH
Q 016668 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (385)
Q Consensus 104 ~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A 180 (385)
-++|-.+++. +++.+++++.+.+.+.. ..||.. |. .++ ++.++++++++.+ +|..++|+ +|
T Consensus 26 ~i~l~~~~~~~~~~~~~~~a~~~~~~~~~-~~y~~~----~~---~~l----r~aia~~~~~~~~----~I~it~G~~~a 89 (353)
T PRK05387 26 LIKLNTNENPYPPSPKVLEAIRAALGDDL-RLYPDP----NA---DAL----RQAIAAYYGLDPE----QVFVGNGSDEV 89 (353)
T ss_pred eeeccCCCCCCCCCHHHHHHHHHHhhhhh-hcCCCC----cH---HHH----HHHHHHHhCCCHH----HEEEcCCHHHH
Confidence 3666655554 47889999886654322 234431 21 234 4467778888774 56677776 59
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.++++|||+|++++|.|..+.. .....|..+..++ ++ +++.+|++++++ ..++|++..+
T Consensus 90 l~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~-----~~~~v~~~~P 153 (353)
T PRK05387 90 LAHAFLAFFNHDRPLLFPDITYSFYPV--------YAGLYGIPYEEIP--LD-DDFSIDVEDYLR-----PNGGIIFPNP 153 (353)
T ss_pred HHHHHHHhcCCCCEEEEeCCCHHHHHH--------HHHHcCCEEEEee--cC-CCCCCCHHHHHh-----cCCEEEEeCC
Confidence 999999999999999999986643321 2345676554444 54 356799998863 3467777777
Q ss_pred CCC--CCCCHHHHHHHHHHc-CcEEEEeccccccccccCcccCCCC--CCcEEEECCCccC--ccccEEEEEEeCCCCch
Q 016668 261 AYP--RDFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 261 ~~~--~~~dl~~I~~ia~~~-ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~ 333 (385)
+|| ...+.+++.++++.+ ++++++|++|. .+. .......++ .-.+++.|++|++ +|+|.|++++++
T Consensus 154 ~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~-~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~----- 226 (353)
T PRK05387 154 NAPTGIALPLAEIERILAANPDSVVVIDEAYV-DFG-GESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP----- 226 (353)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCcEEEEeCccc-ccC-CcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCH-----
Confidence 776 577899999999876 99999999973 321 111111112 2247899999986 789999999876
Q ss_pred hHHHHHHhhc
Q 016668 334 VELESAINNA 343 (385)
Q Consensus 334 ~~~~~~i~~~ 343 (385)
++.+++...
T Consensus 227 -~~~~~l~~~ 235 (353)
T PRK05387 227 -ELIEALNRV 235 (353)
T ss_pred -HHHHHHHHh
Confidence 677776554
No 199
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.64 E-value=8.9e-15 Score=145.34 Aligned_cols=203 Identities=20% Similarity=0.182 Sum_probs=136.9
Q ss_pred ccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-H
Q 016668 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-A 180 (385)
Q Consensus 104 ~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A 180 (385)
-+++-..+|+ +++.+++++...+.. . ..|+.. + ..+++ +.+++++|++.+ +|.+++|+. +
T Consensus 34 ~i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~y~~~----~---~~~lr----~~ia~~~~~~~~----~i~~t~G~~~~ 96 (367)
T PRK02731 34 IIKLASNENPLGPSPKAIEAIRAAADE-L-HRYPDG----S---GFELK----AALAEKFGVDPE----RIILGNGSDEI 96 (367)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC----c---HHHHH----HHHHHHhCcCHH----HEEEcCCHHHH
Confidence 3555444444 578899988776532 2 234431 1 12444 457778898763 566777765 6
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.+++++||+|++.+|.|..+.. .....|..+..++ . +++.+|++++++.++. ++|+|+++.+
T Consensus 97 l~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~--~~~~~~~~~l~~~~~~-~~~~v~l~~p 163 (367)
T PRK02731 97 LELLARAYLGPGDEVIYSEHGFAVYPI--------AAQAVGAKPVEVP--A--KDYGHDLDAMLAAVTP-RTRLVFIANP 163 (367)
T ss_pred HHHHHHHhcCCCCEEEEecCCHHHHHH--------HHHHcCCeEEEec--c--cCCCCCHHHHHHHhCC-CCcEEEEeCC
Confidence 777788889999999999886643321 1234566544443 4 3568999999998864 7899988877
Q ss_pred CCC--CCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCC---C-CCc-EEEECCCccC--ccccEEEEEEeCC
Q 016668 261 AYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPF---K-YCD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 261 ~~~--~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~---~-gaD-iv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
+|| ...+.+++.++++.+ |+++++|++|. .+...+....++ + ..+ +++.|++|++ +|.|.|++++++
T Consensus 164 ~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~- 241 (367)
T PRK02731 164 NNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYA-EYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP- 241 (367)
T ss_pred CCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHH-HhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH-
Confidence 765 678899999999875 99999999974 333322111112 1 223 6788999985 688899999987
Q ss_pred CCchhHHHHHHhhc
Q 016668 330 PVLGVELESAINNA 343 (385)
Q Consensus 330 ~~~~~~~~~~i~~~ 343 (385)
++.+.+...
T Consensus 242 -----~~~~~l~~~ 250 (367)
T PRK02731 242 -----EIIDALNRV 250 (367)
T ss_pred -----HHHHHHHHc
Confidence 577777654
No 200
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.63 E-value=7.3e-15 Score=145.86 Aligned_cols=232 Identities=14% Similarity=0.105 Sum_probs=150.4
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~-~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~p 191 (385)
.+|..|++++...+.+..+.+... ...+...++.+.+++ +++.++++||++. ++.+.+...|||.|+.+++.+++++
T Consensus 2 ~~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~-~~~~l~~l~~~~~-~~~v~~~~gsgT~a~ea~~~nl~~~ 79 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANE-AESDLRELLNIPD-NYEVLFLQGGATGQFAAVPLNLLAE 79 (349)
T ss_pred CCCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHH-HHHHHHHHhCCCC-CceEEEEcCCchHHHHHHHHhcCCC
Confidence 468899999998876533212111 112224455555554 7899999999843 2334455566899999999999999
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEecccc-CCCCCCCHHHHHHHhhhcCCcEEEEcC--CCCCCCCCH
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGA--SAYPRDFDY 268 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~-~~~~~iD~d~le~~i~~~~pklIi~~~--s~~~~~~dl 268 (385)
||++++.. .|.++|.+. +.+...|. +..+..+-. +....+|+++++. + .++++|.+.. +++|...+
T Consensus 80 ~~~~l~i~---~G~fg~r~~---~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~th~ETstGv~~~- 148 (349)
T TIGR01364 80 GKVADYIV---TGAWSKKAA---KEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI--S-EDAAYVHYCANETIHGVEFR- 148 (349)
T ss_pred CCeEEEEE---CCHHHHHHH---HHHHHhCC-cEEEeccccCCCCCCCCHHhcCC--C-CCCCEEEEcCCCCcccEecc-
Confidence 99998875 355666542 23445566 555442211 1123577776662 2 3678886643 44555444
Q ss_pred HHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhhc----
Q 016668 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNA---- 343 (385)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~~---- 343 (385)
++++.+|+++++|+++++|.. +-.++..|++++|.||+| ||.| |+++.+++ +.++++..
T Consensus 149 ----~l~~~~~~l~iVDavss~g~~-----~id~~~~d~~~~ssqK~l-gP~Glg~l~~s~~------~~~~~~~~~~~~ 212 (349)
T TIGR01364 149 ----ELPDVKNAPLVADMSSNILSR-----PIDVSKFGLIYAGAQKNI-GPAGLTVVIVRKD------LLGRASRITPSM 212 (349)
T ss_pred ----eecccCCCeEEEEccccccCc-----cCCHHHccEEEEeccccc-CCCceEEEEECHH------HHhhcccCCCCc
Confidence 677778999999999987743 233335679999999987 6997 78887774 32222110
Q ss_pred ------c-CCCccCCChHHHHHHHHHHHHHhhCc-hHH
Q 016668 344 ------V-FPGLQGGPHNHTIGGLAVCLKHAQSP-EFK 373 (385)
Q Consensus 344 ------~-fp~~qg~p~~~~iaala~Al~e~~~~-~~~ 373 (385)
. .....++|+.+.+.|+..||+.+.++ ++.
T Consensus 213 ~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e 250 (349)
T TIGR01364 213 LNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVK 250 (349)
T ss_pred chHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 0 01123689999999999999998877 464
No 201
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.63 E-value=7.1e-15 Score=152.34 Aligned_cols=174 Identities=15% Similarity=0.097 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccc-cCc
Q 016668 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTS 221 (385)
Q Consensus 148 ~le~~~~~~la~lfg----~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g 221 (385)
++++.+++++.+.+| ++++ +|..++|+ .|+..++.++++|||.|++++|.|+++.. .+. ..|
T Consensus 98 ~LR~aiA~~l~~~~g~~v~v~pe----~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~--------~~~~~~G 165 (496)
T PLN02376 98 KFRQAIAHFMGKARGGKVTFDPE----RVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR--------DLRWRTG 165 (496)
T ss_pred HHHHHHHHHHHHHhCCCCcCChh----hEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH--------HHHhhCC
Confidence 788888888888887 5553 45666666 59999999999999999999998766532 122 356
Q ss_pred ceEEEEeccccC-CCCCCCHHHHHHHhh-----hcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccc
Q 016668 222 IYFESMPYRLDE-STGLVDYDMLEKTAI-----LFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 222 ~~~~~i~~~~~~-~~~~iD~d~le~~i~-----~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~ 290 (385)
..+. +++++. +++.+|++.+++.++ ..++|+|+++.|+|| ...+ +++|.++|+++|++||+|++| .
T Consensus 166 ~~vv--~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY-~ 242 (496)
T PLN02376 166 VEII--PVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIY-A 242 (496)
T ss_pred CEEE--EEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCc-c
Confidence 5444 444543 345799999976532 136898888888877 3444 677888999999999999997 4
Q ss_pred cccccCc-ccCC--C----C--C--Cc--EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHh
Q 016668 291 GLVAASV-VADP--F----K--Y--CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 291 Gli~~g~-~~~p--~----~--g--aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
.+++.+. +++. + + + .| +++.|++|.| +|.|.|++++.++ .+.+.+.
T Consensus 243 ~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-----~l~~~~~ 303 (496)
T PLN02376 243 ATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-----SVVSCAR 303 (496)
T ss_pred ccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-----HHHHHHH
Confidence 5554332 2221 1 1 1 13 3578999987 7899999999654 5555443
No 202
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.63 E-value=3.2e-14 Score=147.90 Aligned_cols=220 Identities=21% Similarity=0.210 Sum_probs=139.7
Q ss_pred cHHHHHHHHHHHHHHHHHcCCC------------CCCCcceeecCCcHHHHHHHHHHh----cc----------------
Q 016668 143 NEYIDELETLCQKRALAAFNLD------------ENKWGVNVQPLSGSPANFEVYTAI----LK---------------- 190 (385)
Q Consensus 143 ~~~~~~le~~~~~~la~lfg~~------------~~~~~~~V~~~sGs~A~~~a~~al----l~---------------- 190 (385)
.+...++|+.+.+|++++++.. ...+ -+++++||.||+.++.+. ++
T Consensus 124 spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~--G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~ 201 (522)
T TIGR03799 124 SKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSL--GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAA 201 (522)
T ss_pred CcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCC--eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhh
Confidence 3445689999999999998531 1123 345678899999887553 11
Q ss_pred ------CCCEEeecCCCCCccccCCccccccccccCcc---eEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEE--E
Q 016668 191 ------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI---YFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLI--I 256 (385)
Q Consensus 191 ------pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~---~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklI--i 256 (385)
+++.|++.+. +|.+.. +.+...|. .+..++ +| +++.+|+++|++.+++ .+.+.+ +
T Consensus 202 ~~~~~~~~~~v~~S~~---~H~S~~-----kaa~~lglg~~~v~~vp--~d-~~g~~d~~~L~~~i~~~~~~g~~~~~vv 270 (522)
T TIGR03799 202 LKHYGYDGLAILVSER---GHYSLG-----KAADVLGIGRDNLIAIK--TD-ANNRIDVDALRDKCAELAEQNIKPLAIV 270 (522)
T ss_pred hhhccCCceEEEECCC---chHHHH-----HHHHHcCCCcccEEEEE--eC-CCCcCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 1345666654 343321 23345554 344444 55 4689999999998853 233333 3
Q ss_pred --EcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc---CCCCCCcEEEECCCccCccccE-EEEEEeCCC
Q 016668 257 --AGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDP 330 (385)
Q Consensus 257 --~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~---~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~ 330 (385)
.+.+.++...|+++|+++|+++|+|+++|+||+.+......+. ..++++|.+++++|||+.+|.| |+++++++
T Consensus 271 ataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~- 349 (522)
T TIGR03799 271 GVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDP- 349 (522)
T ss_pred EEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCH-
Confidence 2344578889999999999999999999999865543222111 1123789999999999999987 88888875
Q ss_pred CchhHHHHHHhhc-c-----------CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhc
Q 016668 331 VLGVELESAINNA-V-----------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSAC 381 (385)
Q Consensus 331 ~~~~~~~~~i~~~-~-----------fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~ 381 (385)
++.+.+... . ...++++.....+ .+-.+++.+-..+|++..++.++
T Consensus 350 ----~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al-~lw~aL~~lG~~G~~~ii~~~~~ 407 (522)
T TIGR03799 350 ----ALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAM-LVYAGLHIIGRKGYELLIDQSIE 407 (522)
T ss_pred ----HHHHHhccCcchhcCCCCCccccceeecCcchHHH-HHHHHHHHHhHHHHHHHHHHHHH
Confidence 333333221 0 1124455444433 46677777766677655555443
No 203
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.63 E-value=4.8e-15 Score=148.09 Aligned_cols=164 Identities=21% Similarity=0.210 Sum_probs=113.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++...+||+ .+++++ .+. .+.+.||+.|+..++.++++|||+|++.++.|+++.... ...+...|
T Consensus 49 ~~p~~~~Le~----~lA~l~-~~~-----~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~----~~~l~~~G 114 (366)
T PRK07582 49 SNPTWRALEA----ALGELE-GAE-----ALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALA----REYLAPLG 114 (366)
T ss_pred CCccHHHHHH----HHHHHc-CCC-----EEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHH----HHHHhcCe
Confidence 4555667776 466777 222 577899999999999999999999999987665432110 01122346
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+..++ .++ +.+ ... .++|+|+++.+++| ...|+++|.++|+++|+++++|++|.... + .
T Consensus 115 ~~v~~v~--~~~-----~~~---~~~--~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~---~--~ 177 (366)
T PRK07582 115 VTVREAP--TAG-----MAE---AAL--AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL---G--Q 177 (366)
T ss_pred EEEEEEC--CCC-----hHH---Hhc--cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc---c--c
Confidence 5444433 321 111 222 36899999888876 46799999999999999999999985332 1 2
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~ 341 (385)
.|++ ++|++++|+||++.||. +|+++++++ ++.+++.
T Consensus 178 ~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~-----~l~~~l~ 218 (366)
T PRK07582 178 RPLELGADLVVASDTKALTGHSDLLLGYVAGRDP-----ELMAAVE 218 (366)
T ss_pred CchhcCCcEEEecccccccCCCCeeEEEEEcCcH-----HHHHHHH
Confidence 4556 88999999999998865 588888654 5666554
No 204
>PRK03321 putative aminotransferase; Provisional
Probab=99.63 E-value=8.2e-15 Score=144.89 Aligned_cols=203 Identities=19% Similarity=0.155 Sum_probs=137.0
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
++|-..++ .+++.+++++...+.. ...||. .|. ++++ +.+++++|++++ +|.+++|+. ++
T Consensus 25 i~l~~~~~~~~~~~~~~~a~~~~~~~--~~~y~~----~g~---~~lr----~~ia~~~~~~~~----~I~~~~G~~~~l 87 (352)
T PRK03321 25 IKLSSNETPFGPLPSVRAAIARAAAG--VNRYPD----MGA---VELR----AALAEHLGVPPE----HVAVGCGSVALC 87 (352)
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHh--cCcCCC----CcH---HHHH----HHHHHHhCcCHH----HEEECCCHHHHH
Confidence 44443333 2577899998876542 223442 132 2444 457788888763 466778876 67
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++++|||+|+++.|.+..+.. .+...|..+. ++++++ ++.+|++++++.++. ++|+|++..++
T Consensus 88 ~~~~~~~~~~gd~Vli~~p~y~~~~~--------~~~~~g~~~~--~v~~~~-~~~~~~~~l~~~~~~-~~~~v~l~~p~ 155 (352)
T PRK03321 88 QQLVQATAGPGDEVIFAWRSFEAYPI--------LVQVAGATPV--QVPLTP-DHTHDLDAMAAAITD-RTRLIFVCNPN 155 (352)
T ss_pred HHHHHHhcCCCCEEEeCCCCHHHHHH--------HHHHcCCEEE--EccCCC-CCCCCHHHHHHhhcc-CCCEEEEeCCC
Confidence 77778889999999998876543211 2234565444 444543 367899999998865 78998887777
Q ss_pred CC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCCC----CCc-EEEECCCccC--ccccEEEEEEeCCC
Q 016668 262 YP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~----gaD-iv~~S~hK~l--~GprgG~I~~~~~~ 330 (385)
|| ...+.++|.++|++ +|+++++|++|. ++...+..+.++. ..+ +++.|++|+| +|.|.|++++++
T Consensus 156 NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~-- 232 (352)
T PRK03321 156 NPTGTVVTPAELARFLDAVPADVLVVLDEAYV-EYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP-- 232 (352)
T ss_pred CCcCCCcCHHHHHHHHHhCCCCeEEEEechHH-HhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--
Confidence 65 57889999999987 599999999973 4444332222222 223 5788999997 578899999976
Q ss_pred CchhHHHHHHhhc
Q 016668 331 VLGVELESAINNA 343 (385)
Q Consensus 331 ~~~~~~~~~i~~~ 343 (385)
++.+.+...
T Consensus 233 ----~~~~~~~~~ 241 (352)
T PRK03321 233 ----EVIAALRKV 241 (352)
T ss_pred ----HHHHHHHHh
Confidence 677777654
No 205
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.63 E-value=8.9e-15 Score=144.92 Aligned_cols=203 Identities=17% Similarity=0.107 Sum_probs=135.4
Q ss_pred cccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeec-CCcHH-H
Q 016668 105 LELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSP-A 180 (385)
Q Consensus 105 l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~-~sGs~-A 180 (385)
++|-..+|+ ++|.+.+++...+.. . .+|+.. . ..+++ +.+++++|++++ +|.+ ++|+. +
T Consensus 37 i~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~y~~~----~---~~~lr----~~ia~~~~~~~~----~i~~~~~Ga~~~ 99 (361)
T PRK00950 37 IKLGSNENPLGPSPKAVEAIEKELSK-I-HRYPEP----D---APELR----EALSKYTGVPVE----NIIVGGDGMDEV 99 (361)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHh-h-cCCCCC----C---HHHHH----HHHHHHhCCCHH----HEEEeCCCHHHH
Confidence 555444443 578888888765542 1 234431 1 12444 457788898764 4555 67765 7
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.++++|||+|++.+|.+..+.. .+...|..+..++ .+ +++.+|++++++.+.. ++++|++..+
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~~~--~~-~~~~~~~~~l~~~~~~-~~~~v~~~~p 167 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEI--------SAKAHGAKPVYAK--RE-EDFSLDVDSVLNAITE-KTKVIFLCTP 167 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEee--cC-CCCCcCHHHHHHHhcc-CCCEEEEeCC
Confidence 777888889999999999886543211 2345566544444 33 3458999999998854 7888888777
Q ss_pred CCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCc--EEEECCCccC--ccccEEEEEEeCCCCchh
Q 016668 261 AYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 261 ~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~ 334 (385)
++| ...+.+++.++|+++|+++++|++|. ++. .+.....++..| +++.|++|++ +|.|.|++++++
T Consensus 168 ~nptG~~~~~~~l~~l~~~~~~~li~De~y~-~~~-~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~------ 239 (361)
T PRK00950 168 NNPTGNLIPEEDIRKILESTDALVFVDEAYV-EFA-EYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE------ 239 (361)
T ss_pred CCCCCCCcCHHHHHHHHHHCCcEEEEECchh-hhC-ccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCH------
Confidence 665 67899999999999999999999984 433 111111112223 6788999987 577889999877
Q ss_pred HHHHHHhhcc
Q 016668 335 ELESAINNAV 344 (385)
Q Consensus 335 ~~~~~i~~~~ 344 (385)
++.+.+....
T Consensus 240 ~~~~~~~~~~ 249 (361)
T PRK00950 240 WLIDYYMRAK 249 (361)
T ss_pred HHHHHHHHhc
Confidence 5666665443
No 206
>PRK09105 putative aminotransferase; Provisional
Probab=99.63 E-value=2.4e-14 Score=143.12 Aligned_cols=199 Identities=19% Similarity=0.137 Sum_probs=134.3
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 181 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~ 181 (385)
+.|-..+| .+++.+++++...+.. . ..|+. ....++++ .+++++|++++ +|.+++|+ +++
T Consensus 46 i~l~~~~~~~~~~~~~~~a~~~~~~~-~-~~Y~~-------~~~~~Lr~----aia~~~~v~~e----~I~it~Gs~~ai 108 (370)
T PRK09105 46 VFLNANECPLGPSPAARDAAARSAAL-S-GRYDL-------ELEDDLRT----LFAAQEGLPAD----HVMAYAGSSEPL 108 (370)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHH-h-cCCCC-------chHHHHHH----HHHHHhCcChh----hEEEcCChHHHH
Confidence 34443444 4688999998766532 1 12332 11234444 56778899874 46666665 599
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++++|||+|++++|.|.++.. .+...|..+..++ .++ ++.+|++++++.. .++|+|+++.++
T Consensus 109 ~~~~~~l~~~gd~Vli~~P~y~~~~~--------~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~~--~~~~~v~l~nP~ 175 (370)
T PRK09105 109 NYAVLAFTSPTAGLVTADPTYEAGWR--------AADAQGAPVAKVP--LRA-DGAHDVKAMLAAD--PNAGLIYICNPN 175 (370)
T ss_pred HHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCeEEEec--CCC-CCCCCHHHHHhcC--CCCCEEEEeCCC
Confidence 99999999999999999997765422 3345676555444 442 4679999998763 368899888888
Q ss_pred CC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCCC----CCc-EEEECCCccC--ccccEEEEEEeCCC
Q 016668 262 YP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~----gaD-iv~~S~hK~l--~GprgG~I~~~~~~ 330 (385)
|| ...+.++|.++++. +|+++|+|++|. .+.. .++..+ +.+ +++.|++|++ +|+|.|++++++
T Consensus 176 NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~-~f~~---~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-- 249 (370)
T PRK09105 176 NPTGTVTPRADIEWLLANKPAGSVLLVDEAYI-HFSD---APSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP-- 249 (370)
T ss_pred CCCCcCcCHHHHHHHHHhCCCCcEEEEECchH-Hhcc---CcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--
Confidence 76 56777888777654 489999999973 3321 122221 345 5678999997 788999999887
Q ss_pred CchhHHHHHHhhc
Q 016668 331 VLGVELESAINNA 343 (385)
Q Consensus 331 ~~~~~~~~~i~~~ 343 (385)
++.+.+...
T Consensus 250 ----~~i~~l~~~ 258 (370)
T PRK09105 250 ----DLLAKLARF 258 (370)
T ss_pred ----HHHHHHHhc
Confidence 577777654
No 207
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=3.3e-14 Score=141.95 Aligned_cols=220 Identities=16% Similarity=0.079 Sum_probs=141.8
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
++|-..++ .+++.+.+++...+... .+|+.. + ..++++ .++++++++.+ +|.+++|+. ++
T Consensus 35 ~~l~~~~~~~~~~~~~~~a~~~~~~~~--~~Y~~~----~---~~~Lr~----~ia~~~~~~~~----~I~it~G~~~~l 97 (369)
T PRK08153 35 ARIGANESGFGPSPSVIAAMREAAAEI--WKYGDP----E---NHDLRH----ALAAHHGVAPE----NIMVGEGIDGLL 97 (369)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCCC----c---cHHHHH----HHHHHhCCCHH----HEEEcCCHHHHH
Confidence 35544443 45889999987654321 234431 1 124554 56677888764 577788876 77
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++++|||.|++.+|.|.++.. .+...|..+..++ ++ +..+|++++++.+...++|+|+++.++
T Consensus 98 ~~~~~~~~~~gd~vlv~~p~y~~~~~--------~~~~~g~~~~~vp--~~--~~~~~~~~l~~~~~~~~~~~i~l~~P~ 165 (369)
T PRK08153 98 GLIVRLYVEPGDPVVTSLGAYPTFNY--------HVAGFGGRLVTVP--YR--DDREDLDALLDAARRENAPLVYLANPD 165 (369)
T ss_pred HHHHHHhcCCCCEEEECCCcchHHHH--------HHHHcCCeEEEee--CC--CCCCCHHHHHHHhcccCCcEEEEeCCC
Confidence 77788889999999999986654322 2234566555455 43 235899999887755578999887777
Q ss_pred CC--CCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC--CCc-EEEECCCccC--ccccEEEEEEeCCCCc
Q 016668 262 YP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~--gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~ 332 (385)
|| ...+.+++.++++.. |++||+|+++. .+...+... ++. .-+ +++.|++|++ +|.|.|++++++
T Consensus 166 NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~-~~~~~~~~~-~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~---- 239 (369)
T PRK08153 166 NPMGSWHPAADIVAFIEALPETTLLVLDEAYC-ETAPAGAAP-PIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAP---- 239 (369)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEeCchh-hhcCcccch-hhhhcCCCEEEEecchHhccCcchheeeeecCH----
Confidence 76 567777777776654 89999999974 444333222 222 223 6799999997 688999999976
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHH
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCL 364 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al 364 (385)
++.+.+.....+. +.+....++...++
T Consensus 240 --~~~~~l~~~~~~~---~~s~~~q~~~~~~l 266 (369)
T PRK08153 240 --GTIKAFDKVRNHF---GMNRIAQAAALAAL 266 (369)
T ss_pred --HHHHHHHHhhcCC---CCCHHHHHHHHHHh
Confidence 5666665543221 23444444444444
No 208
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=1.5e-14 Score=143.45 Aligned_cols=203 Identities=20% Similarity=0.180 Sum_probs=136.8
Q ss_pred cccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHH
Q 016668 105 LELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 181 (385)
Q Consensus 105 l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~ 181 (385)
++|-..++. +++.+++++...+.. . ..||. .|. .+++ +.++++++++.+ +|.+++|+ +++
T Consensus 32 i~l~~n~~~~~~~~~v~~a~~~~~~~-~-~~~p~----~g~---~~lr----~~ia~~~~~~~~----~i~~t~G~~~~l 94 (359)
T PRK03158 32 VKLASNENPYGPSPKVKEAIAAHLDE-L-ALYPD----GYA---PELR----TKVAKHLGVDEE----QLLFGAGLDEVI 94 (359)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHH-h-hcCCC----CcH---HHHH----HHHHHHhCCCHH----HEEECCCHHHHH
Confidence 455433332 588899988765532 1 12332 122 2444 457777888763 46667766 588
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.+++++||+|++.+|.++++.. .....|..+..++ ++ ++.+|++++++.+++ ++|+|+++.++
T Consensus 95 ~~~~~~~~~~gd~v~~~~p~y~~~~~--------~~~~~g~~~~~~~--~~--~~~~d~~~l~~~~~~-~~~~v~i~~p~ 161 (359)
T PRK03158 95 QMISRALLNPGTNTVMAEPTFSQYRH--------NAIIEGAEVREVP--LK--DGGHDLEAMLKAIDE-QTKIVWICNPN 161 (359)
T ss_pred HHHHHHHhCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEEe--cC--CCCcCHHHHHHhcCC-CCCEEEEeCCC
Confidence 88888999999999999987755321 2234566555555 43 457899999988754 78998887777
Q ss_pred CC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCC---C--CCcEEEECCCccC--ccccEEEEEEeCCC
Q 016668 262 YP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~---~--gaDiv~~S~hK~l--~GprgG~I~~~~~~ 330 (385)
|| ...+.++|.++++. +|+++|+|++|. .+...+..+.++ + .-.+++.|++|++ +|.|.|++++++
T Consensus 162 NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~-- 238 (359)
T PRK03158 162 NPTGTYVNHEELLSFLESVPSHVLVVLDEAYY-EYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE-- 238 (359)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECchH-hhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--
Confidence 76 56788999998887 599999999974 343333222222 1 2237789999997 588999999887
Q ss_pred CchhHHHHHHhhcc
Q 016668 331 VLGVELESAINNAV 344 (385)
Q Consensus 331 ~~~~~~~~~i~~~~ 344 (385)
++.+.+....
T Consensus 239 ----~~~~~~~~~~ 248 (359)
T PRK03158 239 ----ELIEKLNIAR 248 (359)
T ss_pred ----HHHHHHHHhc
Confidence 5777776544
No 209
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.62 E-value=2.7e-14 Score=142.80 Aligned_cols=204 Identities=13% Similarity=0.073 Sum_probs=134.4
Q ss_pred CCCcHHHHHHHhhHhhccC-CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC----CCCCCCcceeecCCcHH-HHHHHH
Q 016668 112 NFTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENKWGVNVQPLSGSP-ANFEVY 185 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y-~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg----~~~~~~~~~V~~~sGs~-A~~~a~ 185 (385)
-.+++.+++++.+.+.... ..+||. .|.+ +|++..++++.+.+| ++.+ +|.+++|+. ++..++
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~Y~~----~G~~---~Lr~aia~~~~~~~~~~~~v~~~----~I~it~Ga~~al~~~~ 108 (374)
T PRK02610 40 YDLPPDLKQKLAWLYQQGIESNRYPD----GGHE---ALKQAIAEYVNESAAGSSQITPA----NISVGNGSDELIRSLL 108 (374)
T ss_pred CCCCHHHHHHHHHHHhhcccccCCCC----CchH---HHHHHHHHHhCccccccCCCCHH----HEEEcCChHHHHHHHH
Confidence 3468899999887655422 224543 2433 666655555555442 4443 577788875 877778
Q ss_pred HHhccCCC-EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEEEcCCC
Q 016668 186 TAILKPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASA 261 (385)
Q Consensus 186 ~all~pGD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi~~~s~ 261 (385)
.+++.+|| +|++.+|.|.++.. .+...|..+. +++++++++.+|++++++.++. .++|+|++++++
T Consensus 109 ~~~~~~g~~~Vlv~~P~y~~~~~--------~~~~~g~~~~--~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~ 178 (374)
T PRK02610 109 IATCLGGEGSILVAEPTFSMYGI--------LAQTLGIPVV--RVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPN 178 (374)
T ss_pred HHHcCCCCCeEEEcCCChHHHHH--------HHHHcCCEEE--EecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCC
Confidence 88888886 89999987755422 3356676544 4445544578999999998864 578999888888
Q ss_pred CC--CCCCHHHHHHHHHH-cCcEEEEeccccccccccCcccCCCC-CCc-EEEECCCccC--ccccEEEEEEeCCCCchh
Q 016668 262 YP--RDFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~-~ga~livD~ah~~Gli~~g~~~~p~~-gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~~~ 334 (385)
|| ...+.+++.++++- ++++||+|+++. .+.... ....+. .-. +++.|++|++ +|.|.|++++++
T Consensus 179 NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~-~~~~~~-~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~------ 250 (374)
T PRK02610 179 SPTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQTT-LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP------ 250 (374)
T ss_pred CCCCCCCCHHHHHHHHhccCCcEEEEecccc-ccCccc-hHHHHhcCCCEEEEEecchhccCcccceeeeecCH------
Confidence 87 45565565555432 489999999973 332211 111122 222 6789999997 789999999876
Q ss_pred HHHHHHhhcc
Q 016668 335 ELESAINNAV 344 (385)
Q Consensus 335 ~~~~~i~~~~ 344 (385)
++.+.+....
T Consensus 251 ~l~~~l~~~~ 260 (374)
T PRK02610 251 ELIAVLEKVR 260 (374)
T ss_pred HHHHHHHHhc
Confidence 6777776544
No 210
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.62 E-value=1.7e-14 Score=144.09 Aligned_cols=203 Identities=18% Similarity=0.177 Sum_probs=136.8
Q ss_pred ccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HH
Q 016668 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (385)
Q Consensus 104 ~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A 180 (385)
.+.|-..||. +++.+++++.+.+.+. ..||. .|.+ +++ +.+++++|++.+ +|.+++|+ ++
T Consensus 31 ~i~l~~nen~~~~~~~v~~a~~~~~~~~--~~Yp~----~g~~---~Lr----~aia~~~~~~~~----~I~vt~Gs~e~ 93 (366)
T PRK01533 31 FVKLASNENPFGCSPRVLDELQKSWLDH--ALYPD----GGAT---TLR----QTIANKLHVKME----QVLCGSGLDEV 93 (366)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHHhc--CcCCC----CCHH---HHH----HHHHHHhCCCcc----eEEECCCHHHH
Confidence 3566555555 6889999988765432 12443 1322 444 456777899874 56677776 58
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.++++|||+|++.+|.+.++.. .+...|..+..++ ++ ++.+|++++++.+++ ++|+|+++.+
T Consensus 94 i~~~~~~l~~~gd~vlv~~P~y~~~~~--------~~~~~g~~v~~v~--~~--~~~~d~~~l~~~~~~-~~~~v~i~~P 160 (366)
T PRK01533 94 IQIISRAVLKAGDNIVTAGATFPQYRH--------HAIIEGCEVKEVA--LN--NGVYDLDEISSVVDN-DTKIVWICNP 160 (366)
T ss_pred HHHHHHHhcCCCCEEEEcCCcHHHHHH--------HHHHcCCEEEEee--cC--CCCcCHHHHHHHhCc-CCcEEEEeCC
Confidence 899999999999999999987655432 2345676555554 43 356999999998854 7899988888
Q ss_pred CCC--CCCCHHHHHHHH---HHcCcEEEEeccccccccccCcccCCC---CCCc--EEEECCCccC--ccccEEEEEEeC
Q 016668 261 AYP--RDFDYPRMRQIA---DAVGALLMMDMAHISGLVAASVVADPF---KYCD--VVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 261 ~~~--~~~dl~~I~~ia---~~~ga~livD~ah~~Gli~~g~~~~p~---~gaD--iv~~S~hK~l--~GprgG~I~~~~ 328 (385)
+|| ...+.+++.+++ ++++ ++++|+++. .+...+..++.+ +..+ +++.|++|++ +|.|.|++++++
T Consensus 161 ~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~-~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~ 238 (366)
T PRK01533 161 NNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYY-EYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238 (366)
T ss_pred CCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHH-HhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH
Confidence 876 456666555555 4444 677899974 554332222222 2122 7889999996 788999999876
Q ss_pred CCCchhHHHHHHhhcc
Q 016668 329 DPVLGVELESAINNAV 344 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~ 344 (385)
++.+.+....
T Consensus 239 ------~~~~~l~~~~ 248 (366)
T PRK01533 239 ------ELIEKLNVVR 248 (366)
T ss_pred ------HHHHHHHHhc
Confidence 6777776544
No 211
>PLN02231 alanine transaminase
Probab=99.62 E-value=3.6e-14 Score=148.26 Aligned_cols=215 Identities=15% Similarity=0.106 Sum_probs=139.6
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccC---CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y---~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A 180 (385)
|++-+.+...|..+++.....+.+.. ..+|.. ..|.+ ++++..++++.+..|.+.+ + -+|..++|+ +|
T Consensus 132 i~~~~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~---s~G~~---~lReaIA~~~~~r~g~~~~-p-e~I~iT~Ga~~a 203 (534)
T PLN02231 132 LDKSETHGLFSADAIERAWQILDQIPGRATGAYSH---SQGIK---GLRDAIAAGIEARDGFPAD-P-NDIFLTDGASPA 203 (534)
T ss_pred CCCCCccccCCHHHHHHHHHHHHhcCCccccCcCC---CCCcH---HHHHHHHHHHHhccCCCCC-c-ccEEEeCCHHHH
Confidence 34433333345566666555554422 122433 23544 7888888888887776431 2 256667765 59
Q ss_pred HHHHHHHhcc-CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhc-----CCc
Q 016668 181 NFEVYTAILK-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPK 253 (385)
Q Consensus 181 ~~~a~~all~-pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~-----~pk 253 (385)
+..++.++++ +||.|+++.|.|..+.. .+...|.. .++++++++ ++.+|+++|++.++.. ++|
T Consensus 204 i~~~~~~l~~~~gd~Vli~~P~Y~~y~~--------~~~~~g~~--~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k 273 (534)
T PLN02231 204 VHMMMQLLIRSEKDGILCPIPQYPLYSA--------SIALHGGT--LVPYYLDEATGWGLEISELKKQLEDARSKGITVR 273 (534)
T ss_pred HHHHHHHhccCCCCEEEEeCCCChhHHH--------HHHHcCCE--EEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeE
Confidence 9999999984 89999999998765532 33456654 445556644 3589999999988642 578
Q ss_pred EEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEecccccccccc-Cc-ccCC--C------CCCc---EEEECCCcc
Q 016668 254 LIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VADP--F------KYCD---VVTTTTHKS 315 (385)
Q Consensus 254 lIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~~p--~------~gaD---iv~~S~hK~ 315 (385)
+|++..++||+ .. .+++|.++|+++|++||+|+++ ..+++. +. +++. + ..-| +++.|++|.
T Consensus 274 ~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY-~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~ 352 (534)
T PLN02231 274 ALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVY-QENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKG 352 (534)
T ss_pred EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc-hhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcc
Confidence 88777777773 33 4788999999999999999996 455553 22 2111 1 0112 457899997
Q ss_pred C---ccccEEEEEEe--CCCCchhHHHHHHhhc
Q 016668 316 L---RGPRGGMIFFK--KDPVLGVELESAINNA 343 (385)
Q Consensus 316 l---~GprgG~I~~~--~~~~~~~~~~~~i~~~ 343 (385)
+ +|+|+||+... ++ ++.+.+...
T Consensus 353 ~~g~pGlRiGy~~~~~~~~-----~l~~~l~k~ 380 (534)
T PLN02231 353 YYGECGKRGGYMEVTGFTS-----DVREQIYKV 380 (534)
T ss_pred cccCCccceEEEEEecCCH-----HHHHHHHHH
Confidence 5 59999999763 32 566666443
No 212
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.62 E-value=3.7e-14 Score=141.03 Aligned_cols=225 Identities=16% Similarity=0.097 Sum_probs=142.1
Q ss_pred hhhhcccCChHHHHHHHHHHHHh-hhccccccCC--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQ-FKSLELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~-~~~l~Liase--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
+++++...++..+..+....... ...++|-.++ ...++.+++++...... .+|+. ..|.+ ++++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~---~~Y~~---~~G~~---~lr~~ia~ 73 (364)
T PRK07865 3 VSARLPDFPWDTLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA---PGYPT---TAGTP---ELREAIVG 73 (364)
T ss_pred ccccCCCccHHHHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh---CCCCC---ccCCH---HHHHHHHH
Confidence 35677788887776665443332 2335554332 33367888887654321 13443 23444 67777788
Q ss_pred HHHHHcCCC-CCCCcceeecCCcHH-HHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 156 RALAAFNLD-ENKWGVNVQPLSGSP-ANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 156 ~la~lfg~~-~~~~~~~V~~~sGs~-A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++.+.+|.+ .+ . -+|.+++|+. |+..++..+ ++|||+|++.+|.|.++.. .+...|.. ++.++
T Consensus 74 ~l~~~~~~~~~~-~-~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~--~~~~~-- 139 (364)
T PRK07865 74 WLARRRGVTGLD-P-AAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYEV--------GARLAGAT--VVRAD-- 139 (364)
T ss_pred HHHHHcCCCCCC-c-ccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHHH--------HHHhcCCE--EEecC--
Confidence 888887754 21 1 2567777765 777777777 7999999999987655422 23445653 33321
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----
Q 016668 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---- 303 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~---- 303 (385)
+++++++ .++|+|+++.++||+ .++ +++|.++|+++|++||+|++|. .+...+.....+.
T Consensus 140 ------~~~~l~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~ 208 (364)
T PRK07865 140 ------SLTELGP----QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYL-ELGWDAEPVSILDPRVC 208 (364)
T ss_pred ------ChhhCCc----ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-hhccCCCCCcccccccc
Confidence 2233322 468999888777773 334 6788899999999999999974 4444332222221
Q ss_pred C--Cc--EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 304 Y--CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 304 g--aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+ .+ +++.|++|.+ +|.|.|++++++ ++.+++...
T Consensus 209 ~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------~~~~~~~~~ 248 (364)
T PRK07865 209 GGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------ALVAELLEV 248 (364)
T ss_pred CCccceEEEEeechhccCCCceeeEEEecCH------HHHHHHHHH
Confidence 1 12 7899999986 688999999876 566666543
No 213
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.62 E-value=2.9e-15 Score=158.78 Aligned_cols=197 Identities=16% Similarity=0.091 Sum_probs=140.5
Q ss_pred HHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 152 ~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
.+++.++++||++.. .+.++|| .+|.++++++++|||+||+.. ++|.|.- ..+.+.|+...++.-.
T Consensus 199 eAe~~AA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdR---N~HKSv~-----haLilsga~PVYl~P~ 265 (714)
T PRK15400 199 EAEEYIARVFNADRS-----YMVTNGTSTANKIVGMYSAPAGSTVLIDR---NCHKSLT-----HLMMMSDVTPIYFRPT 265 (714)
T ss_pred HHHHHHHHHhCCCcE-----EEEeCchHHHHHHHHHHhcCCCCEEEeec---ccHHHHH-----HHHHHcCCeEEEeccc
Confidence 467789999999984 3456675 599999999999999999876 4665521 1455777754444322
Q ss_pred ccCCCC---CCC-----HHHHHHHhhhc----CCc-EEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCc
Q 016668 231 LDESTG---LVD-----YDMLEKTAILF----RPK-LIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (385)
Q Consensus 231 ~~~~~~---~iD-----~d~le~~i~~~----~pk-lIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~ 297 (385)
.+ ..| .|+ .+.+++.++++ +|+ +|+++++.+|...|+++|.++|+.++ |++|+||+..+.+...
T Consensus 266 rn-~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 266 RN-AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred cc-ccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 22 222 345 89999988653 232 44555666789999999999999887 7899999877665544
Q ss_pred cc--CCCC-CC---c--EEEECCCccCccc-cEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhh
Q 016668 298 VA--DPFK-YC---D--VVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 298 ~~--~p~~-ga---D--iv~~S~hK~l~Gp-rgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
++ +++. ++ | +++.|+||+|++. ++++|..+.. + + .++++.+.......+|+...+|++.+|.+.+.
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-v---d-~~~~n~a~~m~~STSPsY~l~ASLD~a~~~m~ 417 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-V---N-EETFNEAYMMHTTTSPHYGIVASTETAAAMMK 417 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-C---C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 43 5554 66 5 8999999999987 4567766553 1 2 35666654444457899999999999998776
Q ss_pred C
Q 016668 369 S 369 (385)
Q Consensus 369 ~ 369 (385)
.
T Consensus 418 ~ 418 (714)
T PRK15400 418 G 418 (714)
T ss_pred h
Confidence 4
No 214
>PRK05839 hypothetical protein; Provisional
Probab=99.62 E-value=9.6e-14 Score=138.85 Aligned_cols=198 Identities=15% Similarity=0.090 Sum_probs=129.7
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceeecCCcHH-HHHHHHHHhc
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGSP-ANFEVYTAIL 189 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~~~sGs~-A~~~a~~all 189 (385)
.+++.+.+++..... . ...|+. ..|.. ++++..++++.+.+|. +.+ +|..++|+. |+..++.+++
T Consensus 37 ~~~~~~~~a~~~~~~-~-~~~Y~~---~~G~~---~lr~aia~~l~~~~g~~~~~~----~I~it~G~~~al~~~~~~~~ 104 (374)
T PRK05839 37 ETPKFIQDALKNNAH-L-LNKYPK---SAGEE---SLREAQRGFFKRRFKIELKEN----ELIPTFGTREVLFNFPQFVL 104 (374)
T ss_pred CCCHHHHHHHHHHhh-c-cCCCCC---CCCCH---HHHHHHHHHHHHHhCCCCCcc----eEEEecCcHHHHHHHHHHHh
Confidence 457888888775432 1 224543 22443 6777777888888884 443 677888875 7777777764
Q ss_pred --cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--
Q 016668 190 --KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYPR-- 264 (385)
Q Consensus 190 --~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~~-- 264 (385)
++||.|++++|.+..+.. .+...|..+. +++.+.+ .+.+|.++.+ + .++|+|+++.++||+
T Consensus 105 ~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~v~--~v~~~~~~~~~~d~~~~~--~--~~~k~v~i~nP~NPTG~ 170 (374)
T PRK05839 105 FDKQNPTIAYPNPFYQIYEG--------AAIASRAKVL--LMPLTKENDFTPSLNEKE--L--QEVDLVILNSPNNPTGR 170 (374)
T ss_pred cCCCCCEEEECCCCchhhHH--------HHHhcCCEEE--EeecccccCCcCCcchhh--h--ccccEEEEeCCCCCcCc
Confidence 589999999987654422 2345666444 4445533 3466665432 2 268999888888873
Q ss_pred CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--------CCc--EEEECCCccC--ccccEEEEEEeCC
Q 016668 265 DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--------YCD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 265 ~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--------gaD--iv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
.. .+++|.++|+++|++||+|+++. .+...+..++.+. ..| +++.|++|++ +|.|.|++++++
T Consensus 171 ~~s~~~l~~i~~~~~~~~~~ii~DE~Y~-~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~- 248 (374)
T PRK05839 171 TLSLEELIEWVKLALKHDFILINDECYS-EIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDA- 248 (374)
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeccchh-hcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecCH-
Confidence 33 46778888999999999999964 4432222222111 112 6789999974 889999999976
Q ss_pred CCchhHHHHHHhhc
Q 016668 330 PVLGVELESAINNA 343 (385)
Q Consensus 330 ~~~~~~~~~~i~~~ 343 (385)
++.+++...
T Consensus 249 -----~~~~~~~~~ 257 (374)
T PRK05839 249 -----SILKKYKAY 257 (374)
T ss_pred -----HHHHHHHHH
Confidence 576766544
No 215
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.61 E-value=2.7e-14 Score=147.08 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=137.0
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhc----cC--------CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC----CCCCC
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTN----KY--------SEGLPGKRYYGGNEYIDELETLCQKRALAAFN----LDENK 167 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~----~y--------~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg----~~~~~ 167 (385)
.|+|-..||..+..+++.......+ .+ ...|+. +.|.+ +|++.+++++.+.+| ++++
T Consensus 40 ~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~---~~G~~---~LR~aiA~~l~~~~~~~~~v~~~- 112 (468)
T PLN02450 40 IIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQD---YHGLP---AFKNALAEFMSEIRGNKVTFDPN- 112 (468)
T ss_pred eEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCC---CCChH---HHHHHHHHHHHHhhCCCCCcChH-
Confidence 3677778887766655554433211 00 011332 33544 688878888888777 3442
Q ss_pred CcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccc-cCcceEEEEeccccC-CCCCCCHHHHH
Q 016668 168 WGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSIYFESMPYRLDE-STGLVDYDMLE 244 (385)
Q Consensus 168 ~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g~~~~~i~~~~~~-~~~~iD~d~le 244 (385)
+|.+++|+. ++..++.++++|||.|++++|.|.++.. .+. ..|.. +++++.++ +...+|+++++
T Consensus 113 ---~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~--------~~~~~~g~~--~v~v~~~~~~~~~~~~~~le 179 (468)
T PLN02450 113 ---KLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR--------DLKWRTGVE--IVPIHCSSSNGFQITESALE 179 (468)
T ss_pred ---HeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH--------HHhhcCCcE--EEEEecCCccCCcCCHHHHH
Confidence 567778765 9999999999999999999997765421 222 35654 44544543 34578999999
Q ss_pred HHhhh-----cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCc-ccCCCC----------
Q 016668 245 KTAIL-----FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK---------- 303 (385)
Q Consensus 245 ~~i~~-----~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~~---------- 303 (385)
+.++. .++|+|+++.|+||+ .. .+++|.++|+++|++||+|+++ .++.+.+. +.+.+.
T Consensus 180 ~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y-~~~~f~~~~~~s~l~~~~~~~~~~~ 258 (468)
T PLN02450 180 EAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIY-SGTVFDSPGFVSVMEVLKDRKLENT 258 (468)
T ss_pred HHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccc-cccccCCCCcccHHHHhhhcccccC
Confidence 88754 368988888888874 33 3678889999999999999996 45444332 222111
Q ss_pred -CCc--EEEECCCccC--ccccEEEEEEeCC
Q 016668 304 -YCD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 304 -gaD--iv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
..+ +++.|++|.| +|.|.|+++++++
T Consensus 259 ~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 259 DVSNRVHIVYSLSKDLGLPGFRVGAIYSNDE 289 (468)
T ss_pred CCCCcEEEEEeccccCCCCCccEEEEEECCH
Confidence 112 5789999986 7999999999864
No 216
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.60 E-value=2.4e-14 Score=148.52 Aligned_cols=199 Identities=15% Similarity=0.077 Sum_probs=129.1
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH-HHHHHcCCCCCCC-cceeecCCcH-HHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK-RALAAFNLDENKW-GVNVQPLSGS-PANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~-~la~lfg~~~~~~-~~~V~~~sGs-~A~~~a~ 185 (385)
-++..+++.|.++......+ .||.. .|.. ++.+.+.+ .+.+.++...... ..+|..++|+ +|+..++
T Consensus 109 ~p~~~~~~~v~e~~~~~~~~----~Y~~~---~g~~---~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~ 178 (527)
T PRK09275 109 QLGFDADEFVYELVDGIIGD----NYPVP---DRML---KHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIF 178 (527)
T ss_pred CCCCCCCHHHHHHHHHHhcC----CCCCC---CCCH---HHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHH
Confidence 44556678888855444322 25542 2443 45544444 4444333321100 0256667765 5888888
Q ss_pred HH-----hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 186 TA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 186 ~a-----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
.+ +++|||+|++++|.+..+.. .+.+.|..++.++++.+++ ++.+|.++++++++. ++|+|++++
T Consensus 179 ~aL~~~~ll~pGD~Vlv~~P~y~~Y~~--------~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~-~tkai~l~n 249 (527)
T PRK09275 179 DSLKENGLLKAGDKIALMTPIFTPYLE--------IPELPRYDLEVVHINADEENEWQYPDSELEKLRDP-SIKALFLVN 249 (527)
T ss_pred HHHhhhhcCCCCCEEEEeCCChHHHHH--------HHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCC-CCCEEEEeC
Confidence 76 68999999999997655432 2334555556667666543 468999999998754 799999888
Q ss_pred CCCCC--CCC---HHHHHHHHHH--cCcEEEEeccccccccccCcccCCCC-CCc--EEEECCCccC--ccccEEEEEEe
Q 016668 260 SAYPR--DFD---YPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCD--VVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 260 s~~~~--~~d---l~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~-gaD--iv~~S~hK~l--~GprgG~I~~~ 327 (385)
|+||+ ..+ +++|+++|++ ++++||+|+++. .+.. .+.+.+. ..+ +++.|++|++ +|+|.|+++++
T Consensus 250 P~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~-~f~~--~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~ 326 (527)
T PRK09275 250 PSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG-TFVD--DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALH 326 (527)
T ss_pred CcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh-hhcc--cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence 88873 444 7788888964 599999999974 3432 1222222 122 7889999997 89999999998
Q ss_pred CC
Q 016668 328 KD 329 (385)
Q Consensus 328 ~~ 329 (385)
++
T Consensus 327 ~~ 328 (527)
T PRK09275 327 ED 328 (527)
T ss_pred ch
Confidence 75
No 217
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.60 E-value=4.4e-14 Score=142.22 Aligned_cols=193 Identities=17% Similarity=0.222 Sum_probs=123.8
Q ss_pred HHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceeecCCcH-HHHHHHHHHh--cc
Q 016668 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGS-PANFEVYTAI--LK 190 (385)
Q Consensus 116 ~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~~~sGs-~A~~~a~~al--l~ 190 (385)
+.+.+++...+......+|+. ..|.+ ++++..++++.+..+. +.++ +.|..|+|+ +|+..++.++ ++
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~---~~G~~---~lR~aia~~~~~~~~~~~~~~~--i~v~iT~Ga~~al~~~~~~l~~~~ 118 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLP---IEGLA---AYRQAVQELLFGADSPALAAGR--VATVQTPGGTGALRVGADFLKRAF 118 (396)
T ss_pred HHHHHHHHHhcccccCCCcCC---CCCCH---HHHHHHHHHhcCCCCcccccCe--EEEEecCCccHHHHHHHHHHHHhC
Confidence 678888776543322223443 34655 6777667776554432 3321 123566665 5888887655 58
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCC--cEEEEcCCCCCC--CC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGASAYPR--DF 266 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~p--klIi~~~s~~~~--~~ 266 (385)
|||+|++.+|.|.++.. .+...|..+..+++. +++++.+|++++++.++..++ +++++++++||+ ..
T Consensus 119 pGd~Vlv~~P~y~~~~~--------~~~~~g~~~v~v~~~-~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~ 189 (396)
T PRK09257 119 PDAKVWVSDPTWPNHRA--------IFEAAGLEVKTYPYY-DAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADL 189 (396)
T ss_pred CCCeEEECCCCcccHHH--------HHHHcCCcEEEEecc-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCC
Confidence 99999999997765532 345667655555431 334568999999988764333 455567778874 33
Q ss_pred ---CHHHHHHHHHHcCcEEEEecccccccccc-Cc-ccC--CCC-CC-c-EEEECCCccC--ccccEEEEEE
Q 016668 267 ---DYPRMRQIADAVGALLMMDMAHISGLVAA-SV-VAD--PFK-YC-D-VVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 267 ---dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~~--p~~-ga-D-iv~~S~hK~l--~GprgG~I~~ 326 (385)
.+++|.++|+++|+++|+|+++ .++... +. .+. .+. .. . +++.|++|++ +|+|.||++.
T Consensus 190 s~~~~~~l~~~a~~~~~~ii~De~Y-~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 190 TPEQWDELAELLKERGLIPFLDIAY-QGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred CHHHHHHHHHHHHhCCcEEEEeccc-cccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEE
Confidence 3788899999999999999996 455432 11 111 111 12 2 6789999997 4899999874
No 218
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.60 E-value=1.7e-14 Score=152.99 Aligned_cols=196 Identities=13% Similarity=0.082 Sum_probs=137.4
Q ss_pred HHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 152 LCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 152 ~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
.+++.++++||++.. .+.++|| .+|.++++++++|||+|++.. ++|.|.- ..+.+.|+...+++-.
T Consensus 199 eAe~~aA~~fgAd~t-----yfvvNGTS~~n~av~~a~~~~Gd~VLvdR---N~HKSv~-----~aLilsga~PVYl~P~ 265 (713)
T PRK15399 199 EAEEYIARTFGAEQS-----YIVTNGTSTSNKIVGMYAAPAGSTLLIDR---NCHKSLA-----HLLMMSDVVPIWLKPT 265 (713)
T ss_pred HHHHHHHHHhCCCcE-----EEEeCChHHHHHHHHHHhcCCCCEEEeec---ccHHHHH-----HHHHHcCCeeEEeccc
Confidence 467789999999984 3456675 599999999999999999876 4665521 1455777754444322
Q ss_pred ccCCCC---CCCH-----HHHHHHhhhc----CCcEEEE-cCCCCCCCCCHHHHHHHHHHcCcEE-EEeccccccccccC
Q 016668 231 LDESTG---LVDY-----DMLEKTAILF----RPKLIIA-GASAYPRDFDYPRMRQIADAVGALL-MMDMAHISGLVAAS 296 (385)
Q Consensus 231 ~~~~~~---~iD~-----d~le~~i~~~----~pklIi~-~~s~~~~~~dl~~I~~ia~~~ga~l-ivD~ah~~Gli~~g 296 (385)
.+ ..| .|+. +.+++.++++ +|+.+++ +++.+|...|+++|.++| |+.+ ++|+||++...+..
T Consensus 266 ~n-~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 266 RN-ALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cc-ccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 22 222 3555 8888888642 3455555 455568899999999998 6666 69999987665544
Q ss_pred ccc--CCCC---CCcEE---EECCCccCccc-cEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 297 VVA--DPFK---YCDVV---TTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 297 ~~~--~p~~---gaDiv---~~S~hK~l~Gp-rgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
.++ +++. ++|.+ +.|+||+|++. ++.+|..+.. + + .++++.+.......+|+...+|++.+|.+.|
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-v---d-~~~~n~a~~m~~STSPsY~LmASLD~a~~~m 416 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-Y---D-EETFNEAFMMHTSTSPSYPIVASVETAAAML 416 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-C---C-HHHHHHHHHHHcCCCcHHHHHHHHHHHHHHH
Confidence 332 4443 47866 99999999997 5678877653 1 2 3566665444445789999999999999887
Q ss_pred hC
Q 016668 368 QS 369 (385)
Q Consensus 368 ~~ 369 (385)
..
T Consensus 417 ~~ 418 (713)
T PRK15399 417 RG 418 (713)
T ss_pred Hh
Confidence 64
No 219
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.60 E-value=8.1e-14 Score=142.49 Aligned_cols=158 Identities=18% Similarity=0.197 Sum_probs=111.5
Q ss_pred HHHHHHHHcCCCCCCCcceeecCC-cHHHHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
.++++++++|++.+ ++.+++ |+.++.+++.++ +++||+|+++++.|+++..... ......|..+..++
T Consensus 117 ~~~~la~l~g~~~~----~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~G~~~~~v~-- 186 (447)
T PRK00451 117 YQTMICELTGMDVA----NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLK----TYLKGQGIEVVEVP-- 186 (447)
T ss_pred HHHHHHHHhCCCcc----eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHH----HHHHhCCcEEEEec--
Confidence 45688999999874 454455 555777888887 4899999999876654422100 01122465555444
Q ss_pred ccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEE--eccccccccccCcccCCCC-CCc
Q 016668 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMM--DMAHISGLVAASVVADPFK-YCD 306 (385)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~liv--D~ah~~Gli~~g~~~~p~~-gaD 306 (385)
+++ + .+|++++++.+++ ++++|+++.++ +|...|+++|.++|+++|+++++ |.. ..|.. ..+.+ ++|
T Consensus 187 ~~~-~-~~d~~~l~~~i~~-~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~-----~~~~~~~~D 257 (447)
T PRK00451 187 YED-G-VTDLEALEAAVDD-DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLL-----KPPGEYGAD 257 (447)
T ss_pred CCC-C-CCCHHHHHHhcCC-CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccC-----CCcccCCCC
Confidence 553 3 8999999999865 68888776553 46778999999999999999998 533 23322 22334 899
Q ss_pred EEEECCCcc-----CccccEEEEEEeCC
Q 016668 307 VVTTTTHKS-----LRGPRGGMIFFKKD 329 (385)
Q Consensus 307 iv~~S~hK~-----l~GprgG~I~~~~~ 329 (385)
++++|.||+ ++||+.|+++++++
T Consensus 258 ~~~~s~~k~~~~~~~~Gpg~G~l~~~~~ 285 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGPYLGFFATRKK 285 (447)
T ss_pred EEEECCCcCCCCCCCCCCCchHHHhhHH
Confidence 999999986 68898899988774
No 220
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.60 E-value=8.2e-15 Score=141.88 Aligned_cols=167 Identities=22% Similarity=0.205 Sum_probs=128.0
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcc
Q 016668 132 EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFM 211 (385)
Q Consensus 132 ~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~ 211 (385)
.||.+.|. +|+..+.+|+ |++.+-|--. .+.+.||..|...++..++++||.|+..+--|||... .+
T Consensus 52 ~G~iYsRi--~NPT~~vlE~----RiAaLEGG~a-----a~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~--lf 118 (426)
T COG2873 52 PGNIYTRI--MNPTTDVLEE----RIAALEGGVA-----ALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYN--LF 118 (426)
T ss_pred CCceeeec--cCchHHHHHH----HHHHhhcchh-----hhhhccchHHHHHHHHHhccCCCeeEeeccccCchHH--HH
Confidence 37777765 7888898886 6788877654 3567899999999999999999999999888887532 11
Q ss_pred ccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccc
Q 016668 212 TPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHI 289 (385)
Q Consensus 212 ~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~ 289 (385)
. ..+...|..+.++ | ..|++.+++.+++ ++|+|++..-.|| ...|+++|.++||++|+.+++|++-+
T Consensus 119 ~--~tl~~~Gi~v~fv----d----~~d~~~~~~aI~~-nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~a 187 (426)
T COG2873 119 S--HTLKRLGIEVRFV----D----PDDPENFEAAIDE-NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFA 187 (426)
T ss_pred H--HHHHhcCcEEEEe----C----CCCHHHHHHHhCc-ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCC
Confidence 1 1234566644433 2 2479999999976 8999999877777 46799999999999999999999854
Q ss_pred ccccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEe
Q 016668 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 327 (385)
Q Consensus 290 ~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~ 327 (385)
.. .+..|++ |+|||+.|++|++.|.- ||+|+-.
T Consensus 188 tp-----yl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~ 224 (426)
T COG2873 188 TP-----YLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDG 224 (426)
T ss_pred cc-----eecchhhcCCCEEEEeecccccCCccccceEEEeC
Confidence 33 3447888 99999999999997742 4555543
No 221
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.60 E-value=4.9e-14 Score=140.65 Aligned_cols=204 Identities=20% Similarity=0.185 Sum_probs=134.9
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
++|-..+| .+++.+.+++...... ...|+. ..| +.++ +.+++++|++.+ +|.+++|+. ++
T Consensus 39 i~l~~~~~~~~~~~~~~~al~~~~~~--~~~Y~~---~~g----~~lr----~~ia~~~~~~~~----~i~~t~G~~~~l 101 (371)
T PRK05166 39 AKLGSNENPLGPSPAVRRAFADIAEL--LRLYPD---PQG----RALR----EAIAARTGVPAD----RIILGNGSEDLI 101 (371)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHH--hhcCCC---CcH----HHHH----HHHHHHhCcCHH----HEEEcCCHHHHH
Confidence 44544433 4688888888754322 123443 112 1343 456778898763 566777764 88
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++ +++.+|++++++.++. ++|+|++..++
T Consensus 102 ~~~~~~~~~~gd~vli~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~~~~~l~~~~~~-~~~~v~l~~p~ 169 (371)
T PRK05166 102 AVICRAVLRPGDRVVTLYPSFPLHED--------YPTMMGARVERVT--VT-PDLGFDLDALCAAVAR-APRMLMFSNPS 169 (371)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCeEEEee--cC-CCCCCCHHHHHHhhhc-CCCEEEEeCCC
Confidence 88888999999999999887654321 2345676555444 54 2468999999998865 78999888777
Q ss_pred CC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCC---C--CCc-EEEECCCccC--ccccEEEEEEeCC
Q 016668 262 YP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF---K--YCD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~---~--gaD-iv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
|| ..++.+++.++++. .++++++|+++ ..+...+..++.+ . +.. |++.|++|+| +|.|.|+++..++
T Consensus 170 NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~ 248 (371)
T PRK05166 170 NPVGSWLTADQLARVLDATPPETLIVVDEAY-AEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP 248 (371)
T ss_pred CCCCCCCCHHHHHHHHHhCCCCcEEEEECcH-HHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH
Confidence 76 56777777777664 37899999996 4444333233322 1 112 6789999996 7899999887544
Q ss_pred CCchhHHHHHHhhc
Q 016668 330 PVLGVELESAINNA 343 (385)
Q Consensus 330 ~~~~~~~~~~i~~~ 343 (385)
++.+.+...
T Consensus 249 -----~l~~~~~~~ 257 (371)
T PRK05166 249 -----ELVGLLDRV 257 (371)
T ss_pred -----HHHHHHHHh
Confidence 677766543
No 222
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.59 E-value=1.2e-13 Score=139.75 Aligned_cols=201 Identities=13% Similarity=0.064 Sum_probs=126.2
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhcc----CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNK----YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~----y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG 177 (385)
.++|-..++ .+++.+.+++...+... ...+|+. ..|.+ ++++.+++++.+..|.+.+ + -+|..++|
T Consensus 36 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~---~~G~~---~LR~aia~~~~~~~g~~~~-~-~~I~it~G 107 (409)
T PRK07590 36 IIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGP---EQGYD---FLREKIAENDYQARGCDIS-A-DEIFISDG 107 (409)
T ss_pred eEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCC---CCCCH---HHHHHHHHHHHHhcCCcCC-h-hhEEECCC
Confidence 345543333 35788889888776532 1123422 23544 6777777777666655321 1 25777888
Q ss_pred HH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcce---------EEEEeccccCCC-CCCCHHHHHHH
Q 016668 178 SP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------FESMPYRLDEST-GLVDYDMLEKT 246 (385)
Q Consensus 178 s~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~---------~~~i~~~~~~~~-~~iD~d~le~~ 246 (385)
+. |+.. +..+++|||+|++.+|.|.++.. .+...|.. .+++++++++++ ..+|++
T Consensus 108 a~~al~~-l~~~~~~gd~V~v~~P~Y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~----- 173 (409)
T PRK07590 108 AKCDTGN-ILDIFGPDNTIAVTDPVYPVYVD--------TNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP----- 173 (409)
T ss_pred HHHHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCcccccccccccceeEeecccccCCcccCc-----
Confidence 75 6665 45678999999999997765432 22334432 114444455332 344432
Q ss_pred hhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCC-c--EEEECCCcc
Q 016668 247 AILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYC-D--VVTTTTHKS 315 (385)
Q Consensus 247 i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~ga-D--iv~~S~hK~ 315 (385)
..++|+|+++.++||+ .++ +++|.++|+++|++||+|++| ..+...+..+.++ ++. + |++.|++|+
T Consensus 174 --~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~ 250 (409)
T PRK07590 174 --EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY-EAFISDPSLPHSIYEIEGARECAIEFRSFSKT 250 (409)
T ss_pred --ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc-hhhccCCCCCcchhhCCCcccceEEEecCccc
Confidence 2478999888888873 343 677888899999999999997 4454433222222 222 3 568999998
Q ss_pred C--ccccEEEEEEeCC
Q 016668 316 L--RGPRGGMIFFKKD 329 (385)
Q Consensus 316 l--~GprgG~I~~~~~ 329 (385)
+ +|.|.|+++++++
T Consensus 251 ~~~pGlRiG~~i~~~~ 266 (409)
T PRK07590 251 AGFTGTRCAYTVVPKE 266 (409)
T ss_pred cCCcCceeEEEEcCHH
Confidence 7 7899999999873
No 223
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.59 E-value=1.5e-14 Score=143.16 Aligned_cols=175 Identities=21% Similarity=0.212 Sum_probs=130.6
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccc
Q 016668 134 LPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTP 213 (385)
Q Consensus 134 ~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~ 213 (385)
|-.+|. |++..+.+|. .++++.|++. .+.+.||..|+..++..|+++||+|+..+..|+|... ++.
T Consensus 69 ~~Ysr~--~nPt~~~le~----~iaal~ga~~-----~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~--~l~- 134 (409)
T KOG0053|consen 69 YDYSRS--GNPTRDVLES----GIAALEGAAH-----ALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLR--ILR- 134 (409)
T ss_pred cccccC--CCCchHHHHH----HHHHHhCCce-----EEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHH--HHH-
Confidence 444454 7888888886 5788999987 3678899999999999999999999999988887532 111
Q ss_pred ccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 214 KRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 214 ~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
+.....|.... .++ .-|++++++.+++ ++++|++..|.|| ...|+++|+++||++|+++++|++.+.+
T Consensus 135 -~~~~~~gie~~--~vd------~~~~~~~~~~i~~-~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p 204 (409)
T KOG0053|consen 135 -KFLPKFGGEGD--FVD------VDDLKKILKAIKE-NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSP 204 (409)
T ss_pred -HHHHHhCceee--eec------hhhHHHHHHhhcc-CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcc
Confidence 11223343222 211 1256777777765 7899999999998 4679999999999999999999986443
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhh
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~ 342 (385)
....|+. |||||+.|..|++.|.. +|.++.+.+ ++.+++..
T Consensus 205 -----~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~-----~~~~~l~~ 249 (409)
T KOG0053|consen 205 -----YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSE-----ELASRLKF 249 (409)
T ss_pred -----cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcH-----HHHHHHHH
Confidence 2356777 89999999999998874 588888754 66665543
No 224
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.59 E-value=3.4e-14 Score=137.92 Aligned_cols=201 Identities=20% Similarity=0.328 Sum_probs=117.3
Q ss_pred HHHHHHHhhH-hhc---cCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccC
Q 016668 116 RAVMEAVGSC-LTN---KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP 191 (385)
Q Consensus 116 ~~V~~al~s~-l~~---~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~p 191 (385)
..|++|+... +.. ..+.||.. +..-.|.||+ -+++.||++.+- |..++.|||.|+..++.++|+|
T Consensus 27 ~KVL~Af~~~~vs~~hf~~tTGYGY-----~D~GRd~le~----iyA~vfgaE~AL--VRpq~vSGTHAi~~~Lfg~Lrp 95 (403)
T PF06838_consen 27 LKVLKAFQENRVSDSHFAGTTGYGY-----DDIGRDKLER----IYADVFGAEDAL--VRPQFVSGTHAIALALFGVLRP 95 (403)
T ss_dssp HHHHHHHHHTT--GGGCS---TT-T-----T-HHHHHHHH----HHHHHCT-SEEE--EETTS-SHHHHHHHHHHHH--T
T ss_pred HHHHHHHHHcCCChhhcCCCCcCCC-----CCccHHHHHH----HHHHHhCchhhh--hcccccchHHHHHHHHHhcCCC
Confidence 5677776532 111 12234433 3334556766 478999999841 4556689999999999999999
Q ss_pred CCEEeecCC-CC---------CccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC-
Q 016668 192 HDRIMGLDL-PH---------GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS- 260 (385)
Q Consensus 192 GD~Vl~~~~-~~---------ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s- 260 (385)
||+++...- +| .|+ ..| .+.-.|..++.++ +. +++.+|++.+++.+++ ++|+|.+--|
T Consensus 96 GD~ll~~tG~PYDTL~~VIG~~g~-~~G------SL~e~Gi~Y~~v~--L~-~dg~~D~~~i~~~~~~-~tk~v~IQRSr 164 (403)
T PF06838_consen 96 GDELLSITGKPYDTLEEVIGIRGN-GPG------SLKEFGIKYREVP--LT-EDGTIDWEAIKKALKP-NTKMVLIQRSR 164 (403)
T ss_dssp T-EEEESSSS--CCHHHHHTSSSS-SSS------STGGGT-EEEE----B--TTSSB-HHHHHHHHHT-TEEEEEEE-S-
T ss_pred CCeEEEcCCCchhhHHHHhCCCCC-CCC------ChHHhCceeEEEe--ec-CCCCcCHHHHHHhhcc-CceEEEEecCC
Confidence 999997641 11 111 112 2334566666655 44 3589999999999974 7899988544
Q ss_pred CCC-----CCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCcc---ccEEEEEEeCC
Q 016668 261 AYP-----RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKD 329 (385)
Q Consensus 261 ~~~-----~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~G---prgG~I~~~~~ 329 (385)
.|. ...+++++.+++|+. ++++++|++++ .++- ...|.+ |||++.+|+=|+..| |.||+|++++
T Consensus 165 GYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYG-EFvE---~~EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~- 239 (403)
T PF06838_consen 165 GYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYG-EFVE---TQEPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRK- 239 (403)
T ss_dssp TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTT-TTTS---SS-GGGGT-SEEEEETTSGGGTTT-SS-EEEEESH-
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcc-eecc---ccCccccchhheeccceeCCCCCccCcCCEEechH-
Confidence 232 123455566666654 89999999973 2221 124455 999999999999855 7899999998
Q ss_pred CCchhHHHHHHh-hccCCCc
Q 016668 330 PVLGVELESAIN-NAVFPGL 348 (385)
Q Consensus 330 ~~~~~~~~~~i~-~~~fp~~ 348 (385)
++.++.. +..-||+
T Consensus 240 -----~lVe~~a~RLTaPGi 254 (403)
T PF06838_consen 240 -----DLVERAAYRLTAPGI 254 (403)
T ss_dssp -----HHHHHHHHHHS-TTT
T ss_pred -----HHHHHHHhhhcCCcc
Confidence 5666553 3334543
No 225
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.59 E-value=3.9e-14 Score=140.07 Aligned_cols=211 Identities=18% Similarity=0.186 Sum_probs=132.3
Q ss_pred CcHHHHHHHhh-HhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH-HHHHHHh-cc
Q 016668 114 TSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN-FEVYTAI-LK 190 (385)
Q Consensus 114 ~s~~V~~al~s-~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~-~~a~~al-l~ 190 (385)
+++.+++++.. ........+|+. ..|.+ ++++..++++.+..|.+.+ ...+|.+++|+.++ ..++..+ .+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~Y~~---~~g~~---~lr~~ia~~~~~~~~~~~~-~~~~i~~~~G~~~~~~~~~~~~~~~ 91 (363)
T PF00155_consen 19 PPPAAIKAAIRGAATSSSFLGYPP---PQGYP---ELREAIADFLGRRYGVPVD-PEANILVTSGAQAALFLLLRLLKIN 91 (363)
T ss_dssp HHHHHHHHHHHHHHHHTGCTSSTC---TTHHH---HHHHHHHHHHHHHHTHHTT-GGEGEEEESHHHHHHHHHHHHHHSS
T ss_pred chHHHHHHHHHHhhcccccccCCC---chhhH---HHHHHHHHHhhhccCcccc-cceEEEEecccccchhhhhhccccc
Confidence 45666666554 223333335554 22433 6776655555544444332 11257888998744 4445555 67
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCCC-
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYPR- 264 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~~~- 264 (385)
+||+|++++|.|.++.. .+...|..+..+++.. ++++.+|++++++.+++. ++++|+++.+++|+
T Consensus 92 ~~~~vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG 162 (363)
T PF00155_consen 92 PGDTVLVPDPCYPSYIE--------AARLLGAEVIPVPLDS-ENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTG 162 (363)
T ss_dssp TTSEEEEEESSSTHHHH--------HHHHTTSEEEEEEEEE-TTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTT
T ss_pred ccccceecCCccccccc--------cccccCceeeeccccc-cccccccccccccccccccccccccceeeecccccccc
Confidence 99999999987765422 3456676544444322 245689999999998764 46788888877763
Q ss_pred -CCC---HHHHHHHHHHcCcEEEEeccccccccccCc-c---cCCCC-CCc-EEEECCCccC--ccccEEEEEEeCCCCc
Q 016668 265 -DFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-V---ADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 265 -~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~---~~p~~-gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~ 332 (385)
..+ +++|.++|+++|+++++|++|. ++..... . ...++ +.+ +++.|++|++ +|.|.|++++++
T Consensus 163 ~~~~~~~l~~l~~~~~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~---- 237 (363)
T PF00155_consen 163 SVLSLEELRELAELAREYNIIIIVDEAYS-DLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP---- 237 (363)
T ss_dssp BB--HHHHHHHHHHHHHTTSEEEEEETTT-TGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH----
T ss_pred cccccccccchhhhhcccccceeeeecee-ccccCCCccCcccccccccccceeeeeccccccccccccccccchh----
Confidence 445 4555566999999999999984 4443321 1 11122 334 7899999986 678889999977
Q ss_pred hhHHHHHHhhccCCC
Q 016668 333 GVELESAINNAVFPG 347 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~ 347 (385)
++.+.+.....+.
T Consensus 238 --~~~~~l~~~~~~~ 250 (363)
T PF00155_consen 238 --ELIERLRRFQRSG 250 (363)
T ss_dssp --HHHHHHHHHHHHT
T ss_pred --hhhhhhhhccccc
Confidence 6777776654443
No 226
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.59 E-value=7.6e-14 Score=138.43 Aligned_cols=204 Identities=17% Similarity=0.160 Sum_probs=133.7
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN 181 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~ 181 (385)
++|-..+| .+++.+.+++.+.+.. ..+||. .|. .++++ .++++++++.+ +|.+++|+ +|+
T Consensus 33 i~l~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~----~~~---~~lr~----~ia~~~~~~~~----~I~it~G~~~al 95 (357)
T PRK14809 33 VKLSSNENPHGPSPAAVEAIREAAER--VHSYPK----ASH---ADLTA----ALADRWDVSPE----QVWLANGGDGAL 95 (357)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHHhh--hhcCCC----CCH---HHHHH----HHHHHhCCCcc----eEEECCCHHHHH
Confidence 55544433 4688888988766542 234553 132 24444 45667788874 56677776 588
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++++|||.|++.+|.|..+ .. .....|..+..++++.+ ++..+|.+++++... ++|+|+++.++
T Consensus 96 ~~~~~~~~~~gd~V~v~~P~y~~~---~~-----~~~~~g~~~~~~~l~~~-~~~~~~~~~~~~~~~--~~k~i~l~~p~ 164 (357)
T PRK14809 96 DYLARAMLDPGDTVLVPDPGFAYY---GM-----SARYHHGEVREYPVSKA-DDFEQTADTVLDAYD--GERIVYLTSPH 164 (357)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHH---HH-----HHHHcCCeEEEEecccC-cCCCcCHHHHHHhhc--CCcEEEEeCCC
Confidence 889999999999999999865422 11 23455665555554322 235678888877652 58999888888
Q ss_pred CC--CCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCCCC-c-EEEECCCccC--ccccEEEEEEeCCCCch
Q 016668 262 YP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYC-D-VVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~ga-D-iv~~S~hK~l--~GprgG~I~~~~~~~~~ 333 (385)
|| ...+.+++.++++.. +++||+|+++ ..+...+.....++.. . +++.|++|+| +|.|.|++++++
T Consensus 165 NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~----- 238 (357)
T PRK14809 165 NPTGSEIPLDEVEALAERTDEETLVVVDEAY-GEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE----- 238 (357)
T ss_pred CCCCcCCCHHHHHHHHHhCccCcEEEEechh-hhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCH-----
Confidence 77 466777777776654 7899999997 3444322111111222 3 6789999997 689999999987
Q ss_pred hHHHHHHhhc
Q 016668 334 VELESAINNA 343 (385)
Q Consensus 334 ~~~~~~i~~~ 343 (385)
++.+++.+.
T Consensus 239 -~~~~~~~~~ 247 (357)
T PRK14809 239 -EWADAYARV 247 (357)
T ss_pred -HHHHHHHHh
Confidence 577777654
No 227
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.58 E-value=8.9e-15 Score=149.92 Aligned_cols=198 Identities=19% Similarity=0.213 Sum_probs=141.5
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
+++.+++.||+++. .+.++|| .||.++..+++.|||.||+... .|.|... .+.++|+....+.-..
T Consensus 75 Aqe~aA~~fgAd~t-----yFvvNGTS~ank~vi~a~~~~GD~VLvdRN---~HKSi~~-----glilaGa~Pvyl~p~~ 141 (557)
T COG1982 75 AQELAARVFGADHT-----YFVVNGTSTANKAVINAVLTPGDKVLVDRN---CHKSIHH-----GLILAGATPVYLEPSR 141 (557)
T ss_pred HHHHHHHHhCCCce-----EEEECCccHHHHHHHHhhcCCCCEEEecCC---ccHHHHH-----HHHHcCCceEEecCCC
Confidence 67789999999985 2335555 5999999999999999999875 4444321 3456776433332223
Q ss_pred cCCC---CCCCHHHHHHHhhhcC-C-cEE-EEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC-CCC-
Q 016668 232 DEST---GLVDYDMLEKTAILFR-P-KLI-IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD-PFK- 303 (385)
Q Consensus 232 ~~~~---~~iD~d~le~~i~~~~-p-klI-i~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~-p~~- 303 (385)
|+.- +.|+.+.+++.+.++. . |++ +++++.+|...|+++|++.+++.++|+.+|++|.+.....+..+. ..+
T Consensus 142 np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~ 221 (557)
T COG1982 142 NPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNG 221 (557)
T ss_pred CccccccCCCCHHHHHHHHHhChhhheeEEEecCccceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhc
Confidence 3322 3689999998875532 2 554 455666799999999999999999999999999776555554443 232
Q ss_pred CCcEEEECCCccCccc-cEEEEEEeCC-CCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 304 YCDVVTTTTHKSLRGP-RGGMIFFKKD-PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 304 gaDiv~~S~hK~l~Gp-rgG~I~~~~~-~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
++|+++.|+||.+++. ++.+|..++. . --.++++.+......++|+...+|++.+|-...
T Consensus 222 ~~~~~tqS~HK~l~alSQaS~iHv~~~~~----~~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~ 283 (557)
T COG1982 222 GADFVTQSTHKLLAALSQASMIHVKDGRA----VNHERFNEALMMHQSTSPSYPLMASLDVARMQE 283 (557)
T ss_pred CceEEEechhhhhhhhhhhHHHhhCCCcc----CCHHHHHHHHHHHccCCchHHHHHHHHHHHHhh
Confidence 7899999999999876 5567777752 1 234566666555556789999999999955433
No 228
>PLN02263 serine decarboxylase
Probab=99.58 E-value=6.1e-13 Score=135.67 Aligned_cols=216 Identities=14% Similarity=0.120 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHHHHHcCCCC-CCCcceeecCCcHHHHHHHHHHhcc--CCCEEeecCCCCCccccCCccccccccccCcc
Q 016668 146 IDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (385)
Q Consensus 146 ~~~le~~~~~~la~lfg~~~-~~~~~~V~~~sGs~A~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (385)
..++|+...+|++++||.+. ..|| +++++||+||+.++.+.-+ +...|++++. .|.|. .+.+.+.|.
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G--~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~---aH~Sv-----~KAa~llgi 200 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRE---SHYSV-----FKAARMYRM 200 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeE--EEeCcHHHHHHHHHHHHHhhcCCcEEEEcCC---ccHHH-----HHHHHhcCC
Confidence 45899999999999999975 3465 4568889999988877632 3345655553 44332 145677887
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcC--CcEEEE--cCCCCCCCCCHHHHHHHHHHcCc-----EEEEecccccccc
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIA--GASAYPRDFDYPRMRQIADAVGA-----LLMMDMAHISGLV 293 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~--pklIi~--~~s~~~~~~dl~~I~~ia~~~ga-----~livD~ah~~Gli 293 (385)
.+..++ ++ +++.+|+++|++.+.+.+ |-+|+. |.+..|..-|+++|.++|+++|+ ||++|+|++ |.+
T Consensus 201 ~~~~Vp--~d-~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~G-G~~ 276 (470)
T PLN02263 201 ECVKVD--TL-VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALF-GLM 276 (470)
T ss_pred cceEec--cC-CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccch-hhH
Confidence 666555 55 468999999999886543 545543 45566778899999999999997 999999974 433
Q ss_pred cc-CcccCCCC---CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhh------ccCCCccCCChHHHHHHHHH
Q 016668 294 AA-SVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN------AVFPGLQGGPHNHTIGGLAV 362 (385)
Q Consensus 294 ~~-g~~~~p~~---gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~------~~fp~~qg~p~~~~iaala~ 362 (385)
.. -....+++ .+|-++.++||++..|-+ |+++++++ ..+.+.. ..-+.++|+-+....+.+=.
T Consensus 277 lPf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~------~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 277 MPFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRME------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 350 (470)
T ss_pred hhhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehh------hHhhhccChHhhCCCCCCcCCCCCcHHHHHHHH
Confidence 21 00111233 489999999999988855 88888874 2222211 11234455444333344444
Q ss_pred HHHHhhCchHHHHHHHHhc
Q 016668 363 CLKHAQSPEFKVYQNKSAC 381 (385)
Q Consensus 363 Al~e~~~~~~~~y~~~v~~ 381 (385)
+|+..=.++|++..++.++
T Consensus 351 ~L~~~G~~G~~~~i~~~~~ 369 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLR 369 (470)
T ss_pred HHHHhCHHHHHHHHHHHHH
Confidence 5655555556666555544
No 229
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.58 E-value=9.8e-14 Score=137.75 Aligned_cols=201 Identities=14% Similarity=0.115 Sum_probs=128.0
Q ss_pred cccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
++|...+|+ +|+.+++++.+.+.. . ..||.. + ..++ ++.+++++|++++ +|.+++|+. ++
T Consensus 23 i~l~~~~~~~~~p~~~~~a~~~~~~~-~-~~y~~~----~---~~~l----r~~ia~~~~~~~~----~i~it~Ga~~~l 85 (356)
T PRK08056 23 LDFSANINPLGMPVSLKRAIIDNLDC-A-ERYPDV----E---YRHL----HQALARHHQVPAS----WILAGNGETESI 85 (356)
T ss_pred EEeccccCCCCCCHHHHHHHHHHHHh-c-ccCcCc----c---HHHH----HHHHHHHhCcChh----hEEECCCHHHHH
Confidence 555555554 689999998766542 1 234431 1 2244 4457778898874 566777764 87
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC-CCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
..++.++ .||| +++.+|.+..+. ..+...|..+..++ +++++ ..+| +++++.+. .++|+|+++.+
T Consensus 86 ~~~~~~l-~~g~-viv~~P~y~~~~--------~~~~~~g~~~~~v~--~~~~~~~~~~-~~~~~~~~-~~~k~v~l~~p 151 (356)
T PRK08056 86 FAVVSGL-KPRR-AMIVTPGFAEYR--------RALQQVGCEIRRYS--LREADGWQLT-DAILEALT-PDLDCLFLCTP 151 (356)
T ss_pred HHHHHHh-CCCC-EEEeCCCcHHHH--------HHHHHcCCeEEEEe--cccccCCCcc-HHHHHhcc-CCCCEEEEeCC
Confidence 7777765 7887 555666443221 13345676555444 44333 3566 34555554 47899998888
Q ss_pred CCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCc-ccCCCC--CCcEEEECCCccC--ccccEEEEEEeCCC
Q 016668 261 AYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 261 ~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~~--gaDiv~~S~hK~l--~GprgG~I~~~~~~ 330 (385)
+|| ...+ +++|+++|+++|+++|+|+++ .++...+. ....+. ...+++.|+||++ +|.|.|++++.++
T Consensus 152 ~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~- 229 (356)
T PRK08056 152 NNPTGLLPERQLLQAIAERCKSLNIALILDEAF-IDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD- 229 (356)
T ss_pred cCCCCCCCCHHHHHHHHHHHHhcCCEEEEecch-hccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCH-
Confidence 876 4555 788999999999999999996 45443321 112233 2347899999996 6789999998653
Q ss_pred CchhHHHHHHhh
Q 016668 331 VLGVELESAINN 342 (385)
Q Consensus 331 ~~~~~~~~~i~~ 342 (385)
++.+.+..
T Consensus 230 ----~~~~~l~~ 237 (356)
T PRK08056 230 ----AAVARMRR 237 (356)
T ss_pred ----HHHHHHHH
Confidence 46566654
No 230
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.58 E-value=8.8e-14 Score=144.17 Aligned_cols=170 Identities=17% Similarity=0.129 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCc-ceeecCCcH-HHHHHHHHH-----hccCCCEEeecCCCCCccccCCccccccccccC
Q 016668 148 ELETLCQKRALAAFNLDENKWG-VNVQPLSGS-PANFEVYTA-----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~-~~V~~~sGs-~A~~~a~~a-----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (385)
..|+.+++++.+.++......+ .+|..++|+ +|+..++.+ +++|||+|++++|.+..+.. .+.+.
T Consensus 133 ~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~--------~~~l~ 204 (521)
T TIGR03801 133 HSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLE--------IPELP 204 (521)
T ss_pred HHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHH--------HHHHh
Confidence 4555555666666543211110 156666665 588888876 78999999999997655432 22333
Q ss_pred cceEEEEeccccCC-C-----CCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHc--CcEEEEecc
Q 016668 221 SIYFESMPYRLDES-T-----GLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAV--GALLMMDMA 287 (385)
Q Consensus 221 g~~~~~i~~~~~~~-~-----~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~--ga~livD~a 287 (385)
+..+++++++.+++ . +.+|.++++++++. ++|+|+++.|+||+ ..+ +++|.++|+++ +++||+|++
T Consensus 205 ~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~-~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEv 283 (521)
T TIGR03801 205 RYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDP-SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDV 283 (521)
T ss_pred cCCcEEEEeecccccccccccCCCCHHHHHHhcCC-CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 33345555445422 1 67999999987754 79999988888873 444 77888899986 999999999
Q ss_pred ccccccccCcccCCCC-CCc--EEEECCCccC--ccccEEEEEEeCC
Q 016668 288 HISGLVAASVVADPFK-YCD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 288 h~~Gli~~g~~~~p~~-gaD--iv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
+. .+.. .+.+.+. ..| +++.|++|++ +|+|.|+++.+++
T Consensus 284 Y~-~f~~--~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 284 YG-TFVD--DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred ch-hhcc--cccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCch
Confidence 74 3432 2223222 222 7889999997 8999999998864
No 231
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.58 E-value=3e-13 Score=134.28 Aligned_cols=199 Identities=16% Similarity=0.111 Sum_probs=126.8
Q ss_pred ccccc--CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcH-HH
Q 016668 105 LELIA--SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGS-PA 180 (385)
Q Consensus 105 l~Lia--sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs-~A 180 (385)
++|-. +.+.+++.+.+++.+... ..+|+. ..|.+ ++++.+++++.+.+|.+ .+ . -+|..++|+ .|
T Consensus 24 i~l~~~~p~~~~~~~~~~~~~~~~~---~~~Y~~---~~G~~---~lr~~ia~~~~~~~~~~~~~-~-~~I~it~G~~~~ 92 (357)
T TIGR03539 24 VDLSVGTPVDPVPPLIRAALAAAAD---APGYPQ---TWGTP---ELREAIVDWLERRRGVPGLD-P-TAVLPVIGTKEL 92 (357)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHh---hCCCCc---ccCCH---HHHHHHHHHHHHhcCCCCCC-c-CeEEEccChHHH
Confidence 45543 344557888888765432 123543 22444 67777777888877754 21 1 256677775 58
Q ss_pred HHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 181 NFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 181 ~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+..++..+ ++|||.|++.+|.|.++.. .+...|.. .+.+ + |++.++ ..++++|+++.
T Consensus 93 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~--~~~v--~------~~~~l~----~~~~~~v~~~~ 150 (357)
T TIGR03539 93 VAWLPTLLGLGPGDTVVIPELAYPTYEV--------GALLAGAT--PVAA--D------DPTELD----PVGPDLIWLNS 150 (357)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcHHHHH--------HHHhcCCE--Eecc--C------ChhhcC----ccCccEEEEeC
Confidence 88887877 7999999999987654421 23445653 3332 1 223322 23789998887
Q ss_pred CCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC------CC--cEEEECCCccC--ccccEEEE
Q 016668 260 SAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK------YC--DVVTTTTHKSL--RGPRGGMI 324 (385)
Q Consensus 260 s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~------ga--Div~~S~hK~l--~GprgG~I 324 (385)
++||+ ..+ +++|.++|+++|+++|+|+++. .+...+.....+. .. -+++.|++|.+ +|+|+|++
T Consensus 151 p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~ 229 (357)
T TIGR03539 151 PGNPTGRVLSVDELRAIVAWARERGAVVASDECYL-ELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFV 229 (357)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchh-hhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEE
Confidence 77763 344 6778899999999999999973 4443332111121 11 27889999985 88999999
Q ss_pred EEeCCCCchhHHHHHHhhc
Q 016668 325 FFKKDPVLGVELESAINNA 343 (385)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~ 343 (385)
++++ ++.+++...
T Consensus 230 i~~~------~~~~~~~~~ 242 (357)
T TIGR03539 230 AGDP------ALVAELLTV 242 (357)
T ss_pred ecCH------HHHHHHHHH
Confidence 9876 566666543
No 232
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.58 E-value=2.9e-13 Score=136.21 Aligned_cols=195 Identities=21% Similarity=0.183 Sum_probs=131.0
Q ss_pred CCcHHHHHHHhhHhhccC--CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceeecCCc-HHHHHHHHHH
Q 016668 113 FTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSG-SPANFEVYTA 187 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y--~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~~~sG-s~A~~~a~~a 187 (385)
.+++.+.+++...+.... ..+|+. ..|.+ .+++..++++.+.++. +++ +|.+++| ++++..++.+
T Consensus 46 ~~~~~v~~a~~~~~~~~~~~~~~y~~---~~g~~---~lr~~ia~~l~~~~~~~~~~~----~i~~t~G~~~al~~~~~~ 115 (394)
T PRK06836 46 PPPAAVKEALRELAEEEDPGLHGYMP---NAGYP---EVREAIAESLNRRFGTPLTAD----HIVMTCGAAGALNVALKA 115 (394)
T ss_pred CCCHHHHHHHHHHHhcCCcCcccCCC---CCCCH---HHHHHHHHHHHHHhCCCCCcC----cEEEeCChHHHHHHHHHH
Confidence 457889998876654321 112322 12333 5666666666666554 332 4555555 5699999999
Q ss_pred hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CC
Q 016668 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (385)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~ 265 (385)
+++|||.|++.+|.+.++.. .....|..+..+ +.+++++.+|++++++.++. ++|+|+++.++|| ..
T Consensus 116 l~~~gd~Vli~~p~~~~~~~--------~~~~~g~~v~~v--~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~NPtG~~ 184 (394)
T PRK06836 116 ILNPGDEVIVFAPYFVEYRF--------YVDNHGGKLVVV--PTDTDTFQPDLDALEAAITP-KTKAVIINSPNNPTGVV 184 (394)
T ss_pred hcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEE--ecCCccCcCCHHHHHhhcCc-CceEEEEeCCCCCCCcC
Confidence 99999999999987655422 234556654444 46655578999999999865 7899988777776 34
Q ss_pred CC---HHHHHHHHHH------cCcEEEEeccccccccccCc-ccCCCCC--CcEEEECCCccC--ccccEEEEEEeCC
Q 016668 266 FD---YPRMRQIADA------VGALLMMDMAHISGLVAASV-VADPFKY--CDVVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 266 ~d---l~~I~~ia~~------~ga~livD~ah~~Gli~~g~-~~~p~~g--aDiv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
.+ +++|.++|++ +|+++++|+++ ..+...+. .+..+.. -.+++.|++|+| +|.|.|+++++++
T Consensus 185 ~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~ 261 (394)
T PRK06836 185 YSEETLKALAALLEEKSKEYGRPIYLISDEPY-REIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAVNPE 261 (394)
T ss_pred CCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEecCHH
Confidence 44 6777888998 89999999996 45554432 1221222 237889999987 5778999998764
No 233
>PLN02672 methionine S-methyltransferase
Probab=99.57 E-value=2.2e-13 Score=150.06 Aligned_cols=210 Identities=11% Similarity=0.064 Sum_probs=140.3
Q ss_pred cccccCC--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASE--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liase--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
+.|-..+ ..+|+.+++++...+.. +. + +.|.+ ++.+..++++++.+|++.+ +.-+|.+++|+. ++
T Consensus 700 I~LsinE~d~ppPp~V~eAi~eal~~-~~--~-----s~g~p---dlr~aLa~~la~~~Gv~~d-~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 700 IHMDVDESFLPVPSAVKASIFESFVR-QN--I-----SESET---DPRPSILQFIKSNYGFPTD-SCTEFVYGDTSLALF 767 (1082)
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHHhh-cC--C-----CCCCh---HHHHHHHHHHHHHhCcCCC-CCCEEEEeCCHHHHH
Confidence 4444444 44689999998876532 21 1 11222 3455677889999999763 112566778876 66
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
..++.++++|||.|++++|.|+.+.. .+...|..+..++ +++ ++..+|++++++.++..+.++|+++.|
T Consensus 768 ~lll~aLl~pGD~VLVp~PtY~~Y~~--------~a~~~Ga~vv~Vp--l~~e~gf~lD~d~Le~al~~~~~~~I~L~nP 837 (1082)
T PLN02672 768 NKLVLCCVQEGGTLCFPAGSNGTYVS--------AAKFLKANFRRIP--TKSSDGFKLTAKTLASTLETVKKPWVYISGP 837 (1082)
T ss_pred HHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEEe--cccccCCCCCHHHHHHHhccCCCCEEEEECc
Confidence 67889999999999999997765532 3456777555555 543 346899999999985423445655555
Q ss_pred C-CCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCccc--CCC-------CC---C-c-EEEECCCccC--cc
Q 016668 261 A-YPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-------KY---C-D-VVTTTTHKSL--RG 318 (385)
Q Consensus 261 ~-~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~-------~g---a-D-iv~~S~hK~l--~G 318 (385)
+ ||+ .+ ++++|.++|+++|++||+|++| .++.+.+... .++ +. . . +++.|++|.+ +|
T Consensus 838 nhNPTG~v~S~eeLe~Llela~k~di~VIsDEaY-sdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpG 916 (1082)
T PLN02672 838 TINPTGLLYSNSEIEEILSVCAKYGARVIIDTSF-SGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGG 916 (1082)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCC-CccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHH
Confidence 4 763 33 4778889999999999999997 5555543210 001 11 1 2 4678999875 88
Q ss_pred ccEEEEEEeCCCCchhHHHHHHhh
Q 016668 319 PRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 319 prgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+|.||++++++ ++.+.+..
T Consensus 917 LRIGylIap~~-----eLi~~l~~ 935 (1082)
T PLN02672 917 HEFGFLALNDS-----VLIDAFHS 935 (1082)
T ss_pred HHheeEEeCCH-----HHHHHHHH
Confidence 99999999764 57777755
No 234
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.57 E-value=7.8e-15 Score=141.94 Aligned_cols=194 Identities=21% Similarity=0.246 Sum_probs=131.9
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
.|+| ++|.+++++..... |.. .|++.++..++|+ +++++||.+. .+++.|||.||..++.++
T Consensus 3 ~SD~-~~~~m~~a~~~a~~-----gd~---~Yg~D~~~~~l~~----~i~~l~g~e~-----a~f~~sGT~An~~al~~~ 64 (290)
T PF01212_consen 3 RSDT-PTPAMLEAMAAANV-----GDD---AYGEDPTTARLEE----RIAELFGKEA-----ALFVPSGTMANQLALRAH 64 (290)
T ss_dssp S-SS-S-HHEEHHHHHTTS-----B-C---CTTSSHHHHHHHH----HHHHHHTSSE-----EEEESSHHHHHHHHHHHH
T ss_pred CccC-CCHHHHHHHHcccc-----CCc---ccCCChhHHHHHH----HHHHHcCCCE-----EEEeCCCChHHHHHHHHH
Confidence 4777 88999999954321 222 2667777777775 6889999986 357789999999999999
Q ss_pred ccCCCEEeecCCCCCccccCCcccccccc-ccCcceEEEEeccccCCCCCCCHHHHHHHhhh-----cCCcEEEEcCCCC
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-----FRPKLIIAGASAY 262 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~-~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~-----~~pklIi~~~s~~ 262 (385)
++|++.|++.+. +|+.. .....+ .+.|.++ ++++.+ +.+.+|+++|++.++. .+|++|.+..+++
T Consensus 65 ~~~~~~vi~~~~---aHi~~---~E~ga~~~~~G~~~--~~l~~~-~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~ 135 (290)
T PF01212_consen 65 LRPGESVICADT---AHIHF---DETGAIEELSGAKL--IPLPSD-DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTE 135 (290)
T ss_dssp HHTTEEEEEETT---EHHHH---SSTTHHHHHTTCEE--EEEBEC-TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBT
T ss_pred HhcCCceecccc---ceeee---eccchhhHhcCcEE--EECCCc-ccCCCCHHHHHHHhhhccccCCCccEEEEEecCc
Confidence 999999998875 44321 111122 3566644 443332 2389999999999976 3578888876654
Q ss_pred ---CCCC---CHHHHHHHHHHcCcEEEEecccccccc-ccCcccC-CCCCCcEEEECCCccCccccEEEEEEeCC
Q 016668 263 ---PRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVAD-PFKYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 263 ---~~~~---dl~~I~~ia~~~ga~livD~ah~~Gli-~~g~~~~-p~~gaDiv~~S~hK~l~GprgG~I~~~~~ 329 (385)
|... ++++|.++|+++|+.|+.|+|-..--. ..+..+. ...++|++++|++|.+..|-|++++++++
T Consensus 136 ~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~~D~v~~~~tK~~g~~~Gavl~~~~~ 210 (290)
T PF01212_consen 136 LAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAGADSVSFGGTKNGGAPGGAVLAGNKE 210 (290)
T ss_dssp TTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTTSSEEEEETTSTT-SSSEEEEEESHH
T ss_pred CCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhhCCEEEEEEEcccccccceEEEechH
Confidence 5555 467788899999999999998532211 1111111 12389999999999998899999999985
No 235
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.57 E-value=8.4e-14 Score=140.66 Aligned_cols=167 Identities=16% Similarity=0.228 Sum_probs=110.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceee---cCCcHHHHHHHHH---HhccCCCEEeecCCCCCccccCCccc
Q 016668 141 GGNEYIDELETLCQKRALAAFN--LDENKWGVNVQ---PLSGSPANFEVYT---AILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 141 ~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~---~~sGs~A~~~a~~---all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
.|.+ ++++.+.+++.+..+ ++.+ +|. +.+|+.|+..++. ++++|||+|++.+|.|.++..
T Consensus 72 ~G~~---~lR~aia~~~~~~~~~~~~~~----~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~----- 139 (404)
T PTZ00376 72 EGLQ---SFIEAAQKLLFGEASYALAEK----RIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN----- 139 (404)
T ss_pred CCCH---HHHHHHHHHhcCCCccccccC----eEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH-----
Confidence 3555 677766666644433 2332 343 4445567766654 678999999999997765532
Q ss_pred cccccccCcceEEEEeccc-cCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEE
Q 016668 213 PKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILF--RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMM 284 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~-~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~liv 284 (385)
.+...|..+..++ + +++++.+|++.+++.++.. +.++++++.++||+ .. ++++|.++|+++|+++|+
T Consensus 140 ---~~~~~G~~~~~v~--l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 214 (404)
T PTZ00376 140 ---IFKSAGLNVKEYR--YYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFF 214 (404)
T ss_pred ---HHHHcCCceeecc--ccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEE
Confidence 3456776554444 5 2234689999999988542 34567778888874 33 467888999999999999
Q ss_pred eccccccccccCc---cc--CCCC-CC-c-EEEECCCccC--ccccEEEEE
Q 016668 285 DMAHISGLVAASV---VA--DPFK-YC-D-VVTTTTHKSL--RGPRGGMIF 325 (385)
Q Consensus 285 D~ah~~Gli~~g~---~~--~p~~-ga-D-iv~~S~hK~l--~GprgG~I~ 325 (385)
|+++ .++...+. .+ ..+. .. . +++.|++|++ +|+|.|+++
T Consensus 215 De~Y-~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~ 264 (404)
T PTZ00376 215 DMAY-QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALH 264 (404)
T ss_pred ehhh-cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEE
Confidence 9996 45554321 11 1111 22 3 6789999997 689999984
No 236
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.57 E-value=2.9e-13 Score=139.18 Aligned_cols=175 Identities=19% Similarity=0.202 Sum_probs=128.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEE
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (385)
.+++...+++....|.... + .+|..|+|++ |+..++..+++|||.|++-+|.|-+.. ......|.. .
T Consensus 136 ~LR~~ia~~l~~~~g~~~~-~-~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~--------~~~~~~g~~--~ 203 (459)
T COG1167 136 ELREAIAAYLLARRGISCE-P-EQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL--------QALEALGAR--V 203 (459)
T ss_pred HHHHHHHHHHHHhcCCccC-c-CeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHH--------HHHHHcCCc--E
Confidence 6777777788767777642 2 2677888886 999999999999999999988664432 134556664 4
Q ss_pred EeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC--CCCCH---HHHHHHHHHcCcEEEEeccccccccccCcccC
Q 016668 227 MPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YP--RDFDY---PRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (385)
Q Consensus 227 i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~--~~~dl---~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~ 300 (385)
+++++| ..-+|+|+|++.++..+||++++.++. || ...+. ++|.++|+++|+++|.|..+ ..+.+.+..+.
T Consensus 204 ~~vp~d--~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y-~el~~~~~p~~ 280 (459)
T COG1167 204 IPVPVD--EDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYY-GELRYDGPPPP 280 (459)
T ss_pred EecCCC--CCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcc-hhhhcCCCCCC
Confidence 555465 345999999999987789999987653 55 34444 57999999999999999985 45555544333
Q ss_pred CCC---CCc--EEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 301 PFK---YCD--VVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 301 p~~---gaD--iv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
++. .-+ +.++||+|++ +|.|.|||+.++ ++.+++...
T Consensus 281 ~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~------~~~~~~~~~ 323 (459)
T COG1167 281 PLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPP------ELIEKLLRL 323 (459)
T ss_pred ChHhhCCCCCEEEEeeehhhcccccceeeeeCCH------HHHHHHHHH
Confidence 343 212 6799999997 889999999998 566665443
No 237
>PLN02397 aspartate transaminase
Probab=99.56 E-value=1.2e-13 Score=140.42 Aligned_cols=172 Identities=19% Similarity=0.195 Sum_probs=109.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCC-CCCc--ceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccccccc
Q 016668 141 GGNEYIDELETLCQKRALAAFNLDE-NKWG--VNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV 217 (385)
Q Consensus 141 ~G~~~~~~le~~~~~~la~lfg~~~-~~~~--~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~ 217 (385)
.|.+ +|++..++++.+..+... +++- +.+..++|+.++...+..++.|||+|++.+|.|.+|.. .+
T Consensus 91 ~G~~---~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~--------~~ 159 (423)
T PLN02397 91 EGLA---EFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHN--------IF 159 (423)
T ss_pred CCCH---HHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHH--------HH
Confidence 4655 677766666644332211 1110 11222334445666666777899999999997766532 34
Q ss_pred ccCcceEEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccc
Q 016668 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 218 ~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
...|..+..+++. +++++.+|++.+++.++. .++++|+++.++||+ .. .+++|.++|+++|+++|+|+++ .
T Consensus 160 ~~~g~~~~~v~l~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y-~ 237 (423)
T PLN02397 160 RDAGVPVRTYRYY-DPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAY-Q 237 (423)
T ss_pred HHcCCeEEEeecc-cCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc-C
Confidence 5667655544431 223468999999887753 245677778788873 33 4778899999999999999996 6
Q ss_pred cccccCc---ccC--CCC-CCc--EEEECCCccC--ccccEEEEE
Q 016668 291 GLVAASV---VAD--PFK-YCD--VVTTTTHKSL--RGPRGGMIF 325 (385)
Q Consensus 291 Gli~~g~---~~~--p~~-gaD--iv~~S~hK~l--~GprgG~I~ 325 (385)
++.+++. .++ .+. ..+ +++.|++|++ +|+|.||++
T Consensus 238 ~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v 282 (423)
T PLN02397 238 GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALS 282 (423)
T ss_pred CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEE
Confidence 6665431 111 121 123 6789999997 599999985
No 238
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.56 E-value=1.3e-13 Score=137.48 Aligned_cols=174 Identities=16% Similarity=0.107 Sum_probs=117.6
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCC-CEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
++.+++++|++.+ +|.+++|+ +++..++.+++++| |+|++.+|.++.+.. .....|..+..+++..
T Consensus 65 r~~ia~~~~~~~~----~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~--------~~~~~g~~~~~v~~~~ 132 (364)
T PRK04781 65 RSALAALYGCAPE----QLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAV--------CARLQNAPLVEVPLVD 132 (364)
T ss_pred HHHHHHHhCcChH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCCEEEEEecCC
Confidence 3456778898774 57777775 59899999999999 799998886543211 2245566555555321
Q ss_pred cCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCCCCCc-
Q 016668 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFKYCD- 306 (385)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~gaD- 306 (385)
+.+...+|++++++.+...++|+|+++.++|| ...+.+++.++++. .++++|+|+++. .+.........++..|
T Consensus 133 ~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~-~f~~~~~~~~~~~~~~~ 211 (364)
T PRK04781 133 GADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYG-EFSDVPSAVGLLARYDN 211 (364)
T ss_pred CccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcch-hhcCCcchHHHHhhCCC
Confidence 22234689999876654457899988878776 56788877777765 389999999963 4432111111122223
Q ss_pred -EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCC
Q 016668 307 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFP 346 (385)
Q Consensus 307 -iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp 346 (385)
+++.|++|+| +|.|.|++++++ ++.+.+.+...+
T Consensus 212 vi~~~SfSK~~gl~GlRvGy~v~~~------~l~~~l~~~~~~ 248 (364)
T PRK04781 212 LAVLRTLSKAHALAAARIGSLIANA------ELIAVLRRCQAP 248 (364)
T ss_pred EEEEecChhhcccccceeeeeeCCH------HHHHHHHhccCC
Confidence 6789999986 699999999987 677877765443
No 239
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.54 E-value=3.4e-13 Score=133.05 Aligned_cols=201 Identities=15% Similarity=0.123 Sum_probs=132.1
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
++|-..+| .+++.+++++.+.+......+||. .|.+ +++ +.+++++|++.+ +|.+++|+. ++
T Consensus 21 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----~g~~---~lr----~~ia~~~~~~~~----~I~~t~G~~~~l 85 (337)
T PRK03967 21 IWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH----ITSD---PLR----EAIAEFYGLDAE----NIAVGNGSDELI 85 (337)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC----CCHH---HHH----HHHHHHhCcCcc----eEEEcCCHHHHH
Confidence 44443343 357889998877664322234553 1332 444 457778888774 566777765 77
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++ +||+|++.+|.|+.+.. .....|..+..++ ++ +++.+|++.+++.. .++|++++..++
T Consensus 86 ~~~~~~~--~gd~V~v~~P~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~--~~~~~v~~~~P~ 150 (337)
T PRK03967 86 SYLVKLF--EGKHIVITPPTFGMYSF--------YAKLNGIPVIDVP--LK-EDFTIDGERIAEKA--KNASAVFICSPN 150 (337)
T ss_pred HHHHHHh--CCCeEEEeCCChHHHHH--------HHHHcCCeEEEee--cC-CCCCcCHHHHHHhc--cCCCEEEEeCCC
Confidence 6665554 89999999987653311 2345666444444 54 24679999998865 267888887778
Q ss_pred CC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc-EEEECCCccC--ccccEEEEEEeCCCCchhH
Q 016668 262 YP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 262 ~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~ 335 (385)
|| ...+.++|.++++ +++++|+|+++. .+.. ......++ .-. +++.|++|+| +|.|.|++++++ +
T Consensus 151 NPtG~~~~~~~l~~i~~-~~~~ii~De~y~-~~~~-~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~------~ 221 (337)
T PRK03967 151 NPTGNLQPEEEILKVLE-TGKPVVLDEAYA-EFSG-KSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANE------E 221 (337)
T ss_pred CCCCCCCCHHHHHHHHh-cCCEEEEECchh-hhcc-cchHHHHhhCCCEEEEecchHhhcchhhhheeeecCH------H
Confidence 76 5678899999995 699999999974 4431 11111112 223 6789999997 688999999976 6
Q ss_pred HHHHHhhcc
Q 016668 336 LESAINNAV 344 (385)
Q Consensus 336 ~~~~i~~~~ 344 (385)
+.+.+....
T Consensus 222 ~i~~~~~~~ 230 (337)
T PRK03967 222 IIDALYRIK 230 (337)
T ss_pred HHHHHHhhc
Confidence 777776554
No 240
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.53 E-value=3.2e-13 Score=146.87 Aligned_cols=165 Identities=19% Similarity=0.189 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--------cCCCEEeecCCCCCccccCCccccccccc
Q 016668 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--------KPHDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (385)
Q Consensus 147 ~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--------~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (385)
.+++...++|+++++|.+. +.+++.+|+.|+.+.++++- ...++|+++...||.++. .+.
T Consensus 529 lq~i~elq~~l~eltGmd~----~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPa--------sa~ 596 (939)
T TIGR00461 529 QELIAQLEKWLCSITGFDA----ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPA--------SAA 596 (939)
T ss_pred HHHHHHHHHHHHHHHCCCC----cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHH--------HHH
Confidence 3566667889999999996 57889999998887666663 234678888876665433 234
Q ss_pred cCcceEEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcC-CCCCCCCC-HHHHHHHHHHcCcEEEEeccccccccc
Q 016668 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGA-SAYPRDFD-YPRMRQIADAVGALLMMDMAHISGLVA 294 (385)
Q Consensus 219 ~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~-s~~~~~~d-l~~I~~ia~~~ga~livD~ah~~Gli~ 294 (385)
..|.++..++ .+ ++|.+|+++|++.+++ .++++|++.. ++++...| +++|+++||++|.++++|++|..++..
T Consensus 597 ~~G~~Vv~V~--~d-~~G~iDle~L~~~i~~~~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~ 673 (939)
T TIGR00461 597 MAGMQVVPVN--CD-QDGNIDLVDLKNKAEQHGDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVG 673 (939)
T ss_pred HCCCEEEEec--cC-CCCCcCHHHHHHHHhhcCCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChhhCCC
Confidence 5676555555 54 5789999999999974 3677777654 44565545 999999999999999999999664432
Q ss_pred cCcccCCCC-CCcEEEECCCccCcccc-----E-EEEEEeCC
Q 016668 295 ASVVADPFK-YCDVVTTTTHKSLRGPR-----G-GMIFFKKD 329 (385)
Q Consensus 295 ~g~~~~p~~-gaDiv~~S~hK~l~Gpr-----g-G~I~~~~~ 329 (385)
...|-+ ++|++++|.||+|.+|. | |++.+++.
T Consensus 674 ---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~ 712 (939)
T TIGR00461 674 ---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH 712 (939)
T ss_pred ---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh
Confidence 224444 89999999999987443 3 88888874
No 241
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.53 E-value=1.1e-12 Score=127.23 Aligned_cols=246 Identities=19% Similarity=0.122 Sum_probs=153.9
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC--CCCcceeecCCc-HHHHHHHHH
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSG-SPANFEVYT 186 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~--~~~~~~V~~~sG-s~A~~~a~~ 186 (385)
+.-.+++.+.+|+...+......||..+ .|.. . +++.++++++-+. .--.-.|..++| ++|+..++.
T Consensus 75 ~~~~ts~~a~~Av~~al~Sgk~N~Yaps---~G~~---~----AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~ 144 (447)
T KOG0259|consen 75 PCFRTSQEAEQAVVDALRSGKGNGYAPS---VGIL---P----ARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAIS 144 (447)
T ss_pred ccccCCHHHHHHHHHHHhcCCCCCcCCc---cccH---H----HHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHH
Confidence 4556799999998877765544565542 2332 2 3444555533221 000024556666 579999999
Q ss_pred HhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--
Q 016668 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (385)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~-- 263 (385)
+|.+||-.||++.|. ++-|- + .+...++ ++.+|++-++ ++.||++.+|.++.+ ++..|++..|+||
T Consensus 145 ~LA~p~aNILlPrPG---fp~Y~--~---~a~~~~l--EVR~ydlLPe~~weIDL~~veal~DE-NT~AivviNP~NPcG 213 (447)
T KOG0259|consen 145 SLANPGANILLPRPG---FPLYD--T---RAIYSGL--EVRYYDLLPEKDWEIDLDGVEALADE-NTVAIVVINPNNPCG 213 (447)
T ss_pred HhcCCCCceecCCCC---CchHH--H---hhhhcCc--eeEeecccCcccceechHHHHHhhcc-CeeEEEEeCCCCCCc
Confidence 999999999999874 33221 0 2234555 4455555544 569999999999976 6777766667666
Q ss_pred CCC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCc-EEEECCCccC--ccccEEEEEEeCCCCch
Q 016668 264 RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 264 ~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~~ 333 (385)
... -+++|+++|+++|+.+|.|+.+ -.+++++....|+. -+- +.+++.+|-+ +|||-|||+.++..-.+
T Consensus 214 nVys~~HL~kiae~A~klgi~vIaDEVY-~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf 292 (447)
T KOG0259|consen 214 NVYSEDHLKKIAETAKKLGIMVIADEVY-GHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVF 292 (447)
T ss_pred ccccHHHHHHHHHHHHHhCCeEEehhhc-ceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccc
Confidence 233 3789999999999999999985 45566654444444 222 3578999974 99999999998763211
Q ss_pred hH--HHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHh
Q 016668 334 VE--LESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSA 380 (385)
Q Consensus 334 ~~--~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~ 380 (385)
.+ ..+.+.. |.....+|..-.-+|+-.-|.+.- +||=++...++
T Consensus 293 ~~~~~~q~~~~--~~~~~~~p~TiiQ~AlP~IL~kTp-~efF~k~~~~l 338 (447)
T KOG0259|consen 293 RDTKVVQGIKN--FLDIIPGPATIIQGALPDILEKTP-EEFFDKKLSFL 338 (447)
T ss_pred cchHHHHHHHH--HHhccCCccHhHHHHhHHHHHhCh-HHHHHHHHHHH
Confidence 11 1112211 222334677677777776666543 34434444443
No 242
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.52 E-value=4.7e-13 Score=147.29 Aligned_cols=164 Identities=21% Similarity=0.203 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh----ccCCC----EEeecCCCCCccccCCcccccccccc
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al----l~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
+++...++|+++++|.+. +.+++.+|+.|+++.+.++ .++|| +|++++..|++++. .+.+
T Consensus 542 ~~i~e~q~~l~eltG~d~----~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~--------sa~~ 609 (954)
T PRK05367 542 ELIDQLEAWLAEITGYDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPA--------SAVM 609 (954)
T ss_pred HHHHHHHHHHHHHHCCCC----EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHH--------HHHH
Confidence 566667899999999986 5677777888886665544 36776 58888766655432 3456
Q ss_pred CcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCC-CC-CCCHHHHHHHHHHcCcEEEEecccccccccc
Q 016668 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAY-PR-DFDYPRMRQIADAVGALLMMDMAHISGLVAA 295 (385)
Q Consensus 220 ~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~-~~-~~dl~~I~~ia~~~ga~livD~ah~~Gli~~ 295 (385)
.|..+..++ .+ .++.+|+++|++.++.+ ++.+|++.++++ +. ..|+++|+++||++|+++++|++|..+++.
T Consensus 610 ~G~~vv~v~--~d-~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~- 685 (954)
T PRK05367 610 AGMKVVVVA--CD-ENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVG- 685 (954)
T ss_pred CCCEEEEEC--CC-CCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccC-
Confidence 676655555 44 35899999999998654 345555555443 43 368999999999999999999999766542
Q ss_pred CcccCCCC-CCcEEEECCCccCccccE------EEEEEeCC
Q 016668 296 SVVADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKD 329 (385)
Q Consensus 296 g~~~~p~~-gaDiv~~S~hK~l~Gprg------G~I~~~~~ 329 (385)
+..|.+ |+|++++|+||||.+|.| |++.+++.
T Consensus 686 --l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~ 724 (954)
T PRK05367 686 --LARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH 724 (954)
T ss_pred --CCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc
Confidence 223444 899999999999865553 57777763
No 243
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.52 E-value=9.1e-14 Score=137.86 Aligned_cols=170 Identities=15% Similarity=0.154 Sum_probs=118.2
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCC-CEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
.++++++.+|++.+ +|.+++|+ +++..++.++++|| |+|++++|.|+.+. ..+...|..+..++
T Consensus 62 l~~~~a~~~g~~~~----~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~--------~~~~~~G~~~~~v~-- 127 (351)
T PRK01688 62 VIENYAAYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS--------VSAETIGVEIRTVP-- 127 (351)
T ss_pred HHHHHHHHhCCCHH----HEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH--------HHHHHcCCEEEEee--
Confidence 34568888999874 57777776 49999999999997 99999988765432 12345677555554
Q ss_pred ccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC-CC
Q 016668 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-YC 305 (385)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~-ga 305 (385)
++ +++.+|++++++.+ . ++|+|+++.++|| ...+.+++.++++.. +++|++|+++ ..+.........+. +.
T Consensus 128 ~~-~~~~~d~~~l~~~~-~-~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay-~~f~~~~s~~~~~~~~~ 203 (351)
T PRK01688 128 TL-DNWQLDLPAIADNL-D-GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAY-IEFCPQASLAGWLAEYP 203 (351)
T ss_pred cC-CCCCCCHHHHHHhc-c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECch-hhcCCCCChHHHHhhCC
Confidence 44 34789999999887 3 7899998888876 566766766666532 6899999997 33331110001112 23
Q ss_pred c-EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCC
Q 016668 306 D-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFP 346 (385)
Q Consensus 306 D-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp 346 (385)
. +++.|++|++ +|.|.|++++++ ++.+.+.....+
T Consensus 204 n~iv~rSfSK~~glaGlRiGy~i~~~------~~i~~l~~~~~~ 241 (351)
T PRK01688 204 HLVILRTLSKAFALAGLRCGFTLANE------EVINLLLKVIAP 241 (351)
T ss_pred CEEEEecchHhhcCHHHHHhHHhCCH------HHHHHHHhccCC
Confidence 4 6889999986 578889999877 677777665433
No 244
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.52 E-value=1.2e-12 Score=131.25 Aligned_cols=178 Identities=20% Similarity=0.197 Sum_probs=116.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCC----cceeecCCcHHHHHHHHHHhcc--------CC-----CEEeecCCCCCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK--------PH-----DRIMGLDLPHGG 204 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~----~~~V~~~sGs~A~~~a~~all~--------pG-----D~Vl~~~~~~gg 204 (385)
..+...++|+.+.+|++++||.+.... +.-+++++||.||+.++.+.-+ .| .-+++.+. .+
T Consensus 73 ~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~--~a 150 (373)
T PF00282_consen 73 ASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSE--QA 150 (373)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEET--TS
T ss_pred cccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccc--cc
Confidence 456778999999999999999983210 2356778889999888755421 12 22333321 24
Q ss_pred cccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--C---CcEEEE--cCCCCCCCCCHHHHHHHHHH
Q 016668 205 HLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--R---PKLIIA--GASAYPRDFDYPRMRQIADA 277 (385)
Q Consensus 205 h~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~---pklIi~--~~s~~~~~~dl~~I~~ia~~ 277 (385)
|.+. .+.+.+.|..+..++ +++ ++.+|+++|++.+++. + |-+|+. |.+..+..-|+++|+++|++
T Consensus 151 H~S~-----~Kaa~~lGlg~~~I~--~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~ 222 (373)
T PF00282_consen 151 HYSI-----EKAARILGLGVRKIP--TDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEK 222 (373)
T ss_dssp -THH-----HHHHHHTTSEEEEE---BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHH
T ss_pred ccHH-----HHhcceeeeEEEEec--CCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccc
Confidence 5442 245678888766665 653 6899999999988643 1 323333 45567778899999999999
Q ss_pred cCcEEEEeccccccccccCccc---CCCCCCcEEEECCCccCccccE-EEEEEeCC
Q 016668 278 VGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 278 ~ga~livD~ah~~Gli~~g~~~---~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
+++|+++|+|++.......... .-++.+|-++.++||++..|-+ |+++++++
T Consensus 223 ~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 223 YNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDK 278 (373)
T ss_dssp CT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSG
T ss_pred cceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecc
Confidence 9999999999753222222211 1123789999999999988854 88888886
No 245
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.52 E-value=1.5e-13 Score=148.65 Aligned_cols=158 Identities=20% Similarity=0.247 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc-------C-CCEEeecCCCCCccccCCccccccc
Q 016668 145 YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-------P-HDRIMGLDLPHGGHLSHGFMTPKRR 216 (385)
Q Consensus 145 ~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~-------p-GD~Vl~~~~~~ggh~s~~~~~~~~~ 216 (385)
+.+.+.+ .++++++++|.+. +.+++.+|+.|++++++++-. + .++|+++...|+.++. .
T Consensus 541 ~lq~i~e-lq~~l~eLtGmd~----~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpa--------s 607 (954)
T PRK12566 541 YRAMIDE-LEAWLCAITGFDA----ICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPA--------S 607 (954)
T ss_pred HHHHHHH-HHHHHHHHHCCCe----EeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHH--------H
Confidence 3444544 3578999999998 589999999999888888632 3 4577887766655432 2
Q ss_pred cccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCc--EEEEcCCCC-C-CCCCHHHHHHHHHHcCcEEEEeccccccc
Q 016668 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK--LIIAGASAY-P-RDFDYPRMRQIADAVGALLMMDMAHISGL 292 (385)
Q Consensus 217 ~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pk--lIi~~~s~~-~-~~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (385)
+...|.++..++ .| ++|.+|+++|++.+++.+++ +|++.++++ + ...|+++|+++||++|+++++|++|..++
T Consensus 608 a~~~GieVv~Vp--~D-~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~ 684 (954)
T PRK12566 608 AQMAGMRVVIVE--CD-PDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQ 684 (954)
T ss_pred HHHCCCEEEEec--cC-CCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhc
Confidence 345676555555 55 47899999999999744454 444444443 3 44569999999999999999999997655
Q ss_pred cccCcccCCCC-CCcEEEECCCccCccccE
Q 016668 293 VAASVVADPFK-YCDVVTTTTHKSLRGPRG 321 (385)
Q Consensus 293 i~~g~~~~p~~-gaDiv~~S~hK~l~Gprg 321 (385)
.. ...|-+ |+||+++++||||.+|+|
T Consensus 685 ~~---l~~Pg~~GADi~~~s~HKtf~~P~G 711 (954)
T PRK12566 685 VG---LARPADIGADVSHMNLHKTFCIPHG 711 (954)
T ss_pred cC---CCChhhcCCCEEEecCCcccCcCcc
Confidence 42 234455 999999999999988876
No 246
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.52 E-value=6.5e-13 Score=136.14 Aligned_cols=176 Identities=16% Similarity=0.126 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccc-cCc
Q 016668 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTS 221 (385)
Q Consensus 148 ~le~~~~~~la~lfg----~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g 221 (385)
.|++..++.+.+.+| ++++ +|..++|+ .|+..++.++++|||.|+++.|.|+++.. .+. ..|
T Consensus 99 ~LR~aiA~~l~~~~~~~~~v~p~----~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~--------~~~~~~g 166 (447)
T PLN02607 99 SFRQAMASFMEQIRGGKARFDPD----RIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDR--------DLRWRTG 166 (447)
T ss_pred HHHHHHHHHHHHhcCCCCCcCHH----HeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH--------HHHhcCC
Confidence 787777888888877 3443 46667765 59888999999999999999998776532 122 345
Q ss_pred ceEEEEeccccCC-CCCCCHHHHHHHhhh-----cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccc
Q 016668 222 IYFESMPYRLDES-TGLVDYDMLEKTAIL-----FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 222 ~~~~~i~~~~~~~-~~~iD~d~le~~i~~-----~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~ 290 (385)
. ++++++.+++ ++.+|++++++.++. .++|+|+++.|+||. ..+ +++|.++|+++|+.||+|+++ .
T Consensus 167 ~--~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiY-a 243 (447)
T PLN02607 167 V--KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIY-S 243 (447)
T ss_pred c--EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccc-c
Confidence 4 4455545533 346999999988754 367888888888873 444 788899999999999999996 4
Q ss_pred cccccCc-ccCCC------C--C-Cc--EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 291 GLVAASV-VADPF------K--Y-CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 291 Gli~~g~-~~~p~------~--g-aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+.++.+. +++.. + + .+ +++.|++|.| +|.|.|++++.++ ++...+...
T Consensus 244 ~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~-----~l~~~~~~~ 305 (447)
T PLN02607 244 GSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYND-----KVVTTARRM 305 (447)
T ss_pred ccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCH-----HHHHHHHHH
Confidence 4444321 22211 1 1 22 4678999987 7889999998543 565555443
No 247
>PLN02880 tyrosine decarboxylase
Probab=99.52 E-value=1.6e-13 Score=142.01 Aligned_cols=176 Identities=16% Similarity=0.116 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCC----cceeecCCcHHHHHHHHHHhcc-----C-----CC-EEeecCCCCCccccC
Q 016668 144 EYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK-----P-----HD-RIMGLDLPHGGHLSH 208 (385)
Q Consensus 144 ~~~~~le~~~~~~la~lfg~~~~~~----~~~V~~~sGs~A~~~a~~all~-----p-----GD-~Vl~~~~~~ggh~s~ 208 (385)
+...++|+.+.+|+++++|.+...| +.-+++++||.||+.++.+.-+ . .. .|++.+. +|.|.
T Consensus 118 p~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~---aH~Sv 194 (490)
T PLN02880 118 PAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ---THSAL 194 (490)
T ss_pred cccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC---chHHH
Confidence 3455899999999999999986421 1234567789999887755421 0 12 3333432 35442
Q ss_pred CccccccccccCcce---EEEEeccccC-CCCCCCHHHHHHHhhhc-----CCcEEEE--cCCCCCCCCCHHHHHHHHHH
Q 016668 209 GFMTPKRRVSGTSIY---FESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIA--GASAYPRDFDYPRMRQIADA 277 (385)
Q Consensus 209 ~~~~~~~~~~~~g~~---~~~i~~~~~~-~~~~iD~d~le~~i~~~-----~pklIi~--~~s~~~~~~dl~~I~~ia~~ 277 (385)
. +.+...|.. +..++ +|. +++.+|+++|++.+++. .|-+|+. |.+.++...|+++|+++|++
T Consensus 195 ~-----Kaa~~lGlg~~~v~~Vp--~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~ 267 (490)
T PLN02880 195 Q-----KACQIAGIHPENCRLLK--TDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKS 267 (490)
T ss_pred H-----HHHHHcCCCHHHEEEee--cCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHH
Confidence 1 355667764 44555 553 35689999999998643 2555554 45567778899999999999
Q ss_pred cCcEEEEeccccccccccCcccCC---CCCCcEEEECCCccCccccE-EEEEEeCC
Q 016668 278 VGALLMMDMAHISGLVAASVVADP---FKYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 278 ~ga~livD~ah~~Gli~~g~~~~p---~~gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
+|+|+++|+||+.+......+... ++++|.++.++|||+..|.+ |++++++.
T Consensus 268 ~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~ 323 (490)
T PLN02880 268 NGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDR 323 (490)
T ss_pred cCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCH
Confidence 999999999997664432221112 34789999999999988977 78888753
No 248
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.52 E-value=7.4e-14 Score=131.36 Aligned_cols=218 Identities=24% Similarity=0.301 Sum_probs=159.1
Q ss_pred hccccccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHH-HHHHHHHHHHHHHHcCCCCCCCcceeecCCc
Q 016668 103 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYI-DELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (385)
Q Consensus 103 ~~l~Liasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~-~~le~~~~~~la~lfg~~~~~~~~~V~~~sG 177 (385)
..|-++..+||. .|++.++-...+ ..|..|..+.|+.-|+..+ ..|| ..++++-+.++ .+...++
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~al-eeyGaGlssvrfIcGtq~iHk~LE----~kiAqfh~rED-----~ilypsc 136 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKAL-EEYGAGLSSVRFICGTQDIHKLLE----SKIAQFHGRED-----TILYPSC 136 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHH-HHhCCCccceeEEecchHHHHHHH----HHHHHHhCCCc-----eEEeccc
Confidence 345556788886 899999877665 5677788899999898744 3444 46888888777 3667788
Q ss_pred HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhh---hcCCcE
Q 016668 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI---LFRPKL 254 (385)
Q Consensus 178 s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~---~~~pkl 254 (385)
-.||..++-++++|.|-|+...++|.+-. +| +.+.. . -+++|+-.++..+. +.|-|+
T Consensus 137 fdANag~feail~pedAvfSDeLNhASII-dG-------irLck------r------y~h~dv~~l~~~l~~a~k~r~kl 196 (417)
T KOG1359|consen 137 FDANAGAFEAILTPEDAVFSDELNHASII-DG-------IRLCK------R------YRHVDVFDLEHCLISACKMRLKL 196 (417)
T ss_pred cccchHHHHHhcChhhhhhccccccchhh-hh-------hHHHh------h------hccchhHHHHHHHHHhhhheEEE
Confidence 99999999999999999998888664321 11 11111 1 23456666654443 345678
Q ss_pred EEEcC--CCCCCCCCHHHHHHHHHHcCcEEEEecccccccccc-Cc----ccCCCCCCcEEEECCCccCccccEEEEEEe
Q 016668 255 IIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV----VADPFKYCDVVTTTTHKSLRGPRGGMIFFK 327 (385)
Q Consensus 255 Ii~~~--s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~----~~~p~~gaDiv~~S~hK~l~GprgG~I~~~ 327 (385)
|+++. |.-+...|+++|.+++++||++|++|++|+.|+... |. .......+|++..++.|.+.|-.||+..++
T Consensus 197 v~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp 276 (417)
T KOG1359|consen 197 VVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGP 276 (417)
T ss_pred EEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCC
Confidence 87764 334566789999999999999999999999887642 21 112222578999999999999999999999
Q ss_pred CCCCchhHHHHHHhhccCCCccCCChHHH
Q 016668 328 KDPVLGVELESAINNAVFPGLQGGPHNHT 356 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~~~fp~~qg~p~~~~ 356 (385)
+ .+.+.+++.-.|.+.++..+..
T Consensus 277 ~------~li~llrqr~RpylFSnslppa 299 (417)
T KOG1359|consen 277 K------PLISLLRQRSRPYLFSNSLPPA 299 (417)
T ss_pred h------hHHHHHHhcCCceeecCCCChh
Confidence 8 6888898888888887655533
No 249
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.51 E-value=1.8e-13 Score=136.50 Aligned_cols=235 Identities=9% Similarity=-0.005 Sum_probs=138.3
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
-.+++.+...++.|++++...... .. +.+. .+.++.+.+++ +++.++++||++.+ +.+.+.+.|||.++.++
T Consensus 5 ~~f~pGP~~~~~~v~~a~~~~~~~-~~--~~~h---r~~~f~~~~~~-~r~~l~~l~~~~~~-~~v~f~~gs~T~a~~~~ 76 (361)
T TIGR01366 5 GRFGSGPSKVRLEQLQALTTTAAS-LF--GTSH---RQAPVKNLVGR-VREGLAELFSLPDG-YEVILGNGGATAFWDAA 76 (361)
T ss_pred CcccCCCcCCCHHHHHHHHhcCcc-cc--ccCc---CChHHHHHHHH-HHHHHHHHhCCCCC-ceEEEECCchhHHHHHH
Confidence 456788999999999998632100 00 1121 23455555555 89999999999542 21222235588899999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC--CCC
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA--SAY 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~--s~~ 262 (385)
+.+++.+ +.+++..-+++..+.|.. ....+.+ .+..++++ ....+|. .+. .++|+|++.. +++
T Consensus 77 ~~~l~~~-~~l~i~~G~~~~~~~~~a----~~~~~~~-~~~~~~~~---~~~~~~~-----~~~-~~~~lV~~~h~et~t 141 (361)
T TIGR01366 77 TFGLIEK-KSLHLSFGEFSSKFAKAV----KLAPWLG-EPIIVTAD---PGSAPEP-----QAD-PGVDVIAWAHNETST 141 (361)
T ss_pred HHhcccc-cccEEecCHHHHHHHHHH----HhhhccC-CceEEecC---CCCCCCC-----ccC-CCCCEEEEcccCCcc
Confidence 9999753 232232223322222211 0111122 34444432 1233443 232 3689887653 346
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCC----------
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV---------- 331 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~---------- 331 (385)
|...|+++| ++++|+++++|+++++|.. +-.++.+|++++|.||+|.+|.| ++++.+++..
T Consensus 142 G~~~pi~~I---~~~~g~~~iVDavqs~g~~-----~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~ 213 (361)
T TIGR01366 142 GVAVPVRRP---EGSDDALVVIDATSGAGGL-----PVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASG 213 (361)
T ss_pred ceecccccc---cccCCCeEEEEcCccccCC-----CCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCC
Confidence 788898887 5889999999999987753 22333689999999999877756 3334455310
Q ss_pred ----chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCc
Q 016668 332 ----LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 332 ----~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
.+.++...+....-.+..++|..+.+.++..|++.+...
T Consensus 214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~ 256 (361)
T TIGR01366 214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGN 256 (361)
T ss_pred CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHc
Confidence 001111111111112445678888899999999988776
No 250
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.51 E-value=1.5e-12 Score=129.50 Aligned_cols=202 Identities=12% Similarity=0.102 Sum_probs=131.5
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
++|-..+| .+++.+.+++...+.. ..+|+.. +. .++++ .++++++++.+ +|..++|+. ++
T Consensus 25 i~l~~~~n~~~~~~~~~~a~~~~~~~--~~~Y~~~----~~---~~Lr~----aia~~~~v~~~----~I~it~G~~~~i 87 (360)
T PRK07392 25 LDFSASINPLGPPESVIAAIQSALSA--LRHYPDP----DY---RELRL----ALAQHHQLPPE----WILPGNGAAELL 87 (360)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHH--hhcCCCc----CH---HHHHH----HHHHHhCcChh----hEEECCCHHHHH
Confidence 44544444 3678899988766543 2245431 11 24544 45666788874 566777775 88
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC----CCCHHHHHHHhhhcCCcEEEE
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG----LVDYDMLEKTAILFRPKLIIA 257 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~----~iD~d~le~~i~~~~pklIi~ 257 (385)
..++.++ .+||+|++.+|.+.++.. .+...|..+..++ ++.+++ ..|++++++.. .+++++++
T Consensus 88 ~~~~~~l-~~g~~vlv~~P~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 154 (360)
T PRK07392 88 TWAGREL-AQLRAVYLITPAFGDYRR--------ALRAFGATVKELP--LPLDQPSPGLTLRLQTLPPQL--TPNDGLLL 154 (360)
T ss_pred HHHHHHh-CCCCeEEEECCCcHHHHH--------HHHHcCCeEEEEe--cccccCCcccccCHHHHHHhc--cCCCEEEE
Confidence 7777775 478999999987765432 3445676555444 443333 25677776543 25788888
Q ss_pred cCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCCc--EEEECCCccC--ccccEEEEEEeC
Q 016668 258 GASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCD--VVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 258 ~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~gaD--iv~~S~hK~l--~GprgG~I~~~~ 328 (385)
+.++|| ...+-++|.+++++++. +|+|+++ ..+...+..++.+ +..+ +++.|++|+| +|.|.|++++++
T Consensus 155 ~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y-~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~ 232 (360)
T PRK07392 155 NNPHNPTGKLWSREAILPLLEQFAL-VVVDEAF-MDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP 232 (360)
T ss_pred eCCCCCCCCCcCHHHHHHHHHHCCE-EEEECch-hhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH
Confidence 888887 56788999999999985 6669996 4555433222222 2222 6789999987 789999999976
Q ss_pred CCCchhHHHHHHhhcc
Q 016668 329 DPVLGVELESAINNAV 344 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~ 344 (385)
++.+++....
T Consensus 233 ------~~~~~~~~~~ 242 (360)
T PRK07392 233 ------DRLQRWQQWR 242 (360)
T ss_pred ------HHHHHHHhhC
Confidence 5666665443
No 251
>PLN02452 phosphoserine transaminase
Probab=99.50 E-value=5.9e-13 Score=132.88 Aligned_cols=241 Identities=15% Similarity=0.113 Sum_probs=151.8
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhccCCCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHH
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~-~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~ 182 (385)
.+++.|.+..+|+.|++++...+.+....|..- ...+.+.++. ++-+.+++.++++++++. ++.+.+...|||.++.
T Consensus 8 ~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~-~i~~~~~~~L~~l~~~p~-~y~v~~l~Gsgt~~~e 85 (365)
T PLN02452 8 VFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFL-SIIQKAEADLRELLDIPD-NYEVLFLQGGASTQFA 85 (365)
T ss_pred eEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHH-HHHHHHHHHHHHHhCCCC-CceEEEEeCccHHHHH
Confidence 467889999999999999998876533322111 0112244444 444458899999999854 3546566678889999
Q ss_pred HHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc--CC
Q 016668 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG--AS 260 (385)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~--~s 260 (385)
++...++++||++++.. .|.++..+. +.+...|........+.......+|+++++. ...++.|.+. .+
T Consensus 86 a~~~nl~~~~~~~l~~~---~G~fg~r~~---~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~hnET 156 (365)
T PLN02452 86 AIPLNLCKPGDKADFVV---TGSWSKKAA---KEAKKYCKTNVIASGKDEKYTKIPSVSEWEL---TPDAKFVHICANET 156 (365)
T ss_pred HHHHhcCCCCCeEEEEE---CCHHHHHHH---HHHHHhCCCcEEEecCCCCCCCCCChHHcCC---CCCCcEEEECCCCC
Confidence 99999999999998876 366554432 2233445422222111111122577777532 2246777554 34
Q ss_pred CCCCC-CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 261 AYPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 261 ~~~~~-~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
.+|.. .|++++. ++++++|+++..|.. +-+++..++.++|.||+| ||.| |+++.+++ +.+
T Consensus 157 stGv~~~~~~~i~------~~~lvVDa~Ss~g~~-----pidv~~~~v~~~saqK~l-GP~Gl~~v~vr~~------~l~ 218 (365)
T PLN02452 157 IHGVEFKDYPDVG------NVPLVADMSSNFLSK-----PVDVSKYGVIYAGAQKNV-GPSGVTIVIIRKD------LIG 218 (365)
T ss_pred CCcEecCcccccC------CCeEEEECCccccCc-----ccCHHHcCEEEEeccccc-CCCCeEEEEEcHH------HHh
Confidence 56653 6666654 389999999876632 233334455668999988 7998 88888874 332
Q ss_pred HHhhcc-----------CCCccCCChHHHHHHHHHHHHHhhCc-hHH
Q 016668 339 AINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFK 373 (385)
Q Consensus 339 ~i~~~~-----------fp~~qg~p~~~~iaala~Al~e~~~~-~~~ 373 (385)
++.... .....++|..+.|.++..+|+.+.++ ++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~ 265 (365)
T PLN02452 219 NARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLK 265 (365)
T ss_pred hcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHH
Confidence 221110 01123589999999999999998875 443
No 252
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.50 E-value=1.9e-12 Score=128.86 Aligned_cols=206 Identities=22% Similarity=0.241 Sum_probs=144.3
Q ss_pred ccccccCCCCC--cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceeecCCcHH-
Q 016668 104 SLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSP- 179 (385)
Q Consensus 104 ~l~Liasen~~--s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg-~~~~~~~~~V~~~sGs~- 179 (385)
-++|.+.||+. |+.+.+++...+. ..+-||.. . ..+++ +.+++.+| .+.+ +|....|+.
T Consensus 24 ~i~LssNenP~gp~~~~~~~~~~~~~--~~~rYPd~------~-~~~l~----~a~a~~~~~~~~~----~V~~gnGsde 86 (356)
T COG0079 24 IIKLSSNENPYGPPPKVIEAIRAALD--KLNRYPDP------D-YRELR----AALAEYYGVVDPE----NVLVGNGSDE 86 (356)
T ss_pred ceeecCCCCCCCCCHHHHHHHHHHHH--hhccCCCC------c-HHHHH----HHHHHHhCCCCcc----eEEEcCChHH
Confidence 46777888886 4788888776553 11235542 1 12343 45788889 6653 677788875
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
.+..++.+++.|||+|+++.|.++.|.. .+...|..+..++ +++ +.+|++.+.+.+.+ ++++|++++
T Consensus 87 ~i~~l~~~~~~~gd~vl~~~Ptf~~Y~~--------~a~~~g~~~~~v~--~~~--~~~d~~~~~~~~~~-~~~lv~i~n 153 (356)
T COG0079 87 LIELLVRAFVEPGDTVLIPEPTFSMYEI--------AAQLAGAEVVKVP--LKE--FRLDLDAILAAIRD-KTKLVFLCN 153 (356)
T ss_pred HHHHHHHHhhcCCCEEEEcCCChHHHHH--------HHHhcCCeEEEec--ccc--cccCHHHHHHhhhc-CCCEEEEeC
Confidence 8888889999999999999998765432 2345676555555 442 78999999998876 799999999
Q ss_pred CCCC--CCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCCCCc--EEEECCCccC--ccccEEEEEEeCCCC
Q 016668 260 SAYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFKYCD--VVTTTTHKSL--RGPRGGMIFFKKDPV 331 (385)
Q Consensus 260 s~~~--~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~gaD--iv~~S~hK~l--~GprgG~I~~~~~~~ 331 (385)
|+|| ...+.++|.+++... +.+|++|+|+ ..+...... ..+...+ +++-|++|.| +|.|.|+.++++
T Consensus 154 PNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY-~eF~~~~~~-~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--- 228 (356)
T COG0079 154 PNNPTGTLLPREELRALLEALPEGGLVVIDEAY-IEFSPESSL-ELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--- 228 (356)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCch-hhcCCchhh-hhccCCCCEEEEEecHHhhhcchhceeeccCCH---
Confidence 9987 456777777777654 8899999996 343321100 1111233 6788999975 889999988887
Q ss_pred chhHHHHHHhhccCCC
Q 016668 332 LGVELESAINNAVFPG 347 (385)
Q Consensus 332 ~~~~~~~~i~~~~fp~ 347 (385)
++.+.+++..-|.
T Consensus 229 ---~~i~~l~~vr~p~ 241 (356)
T COG0079 229 ---ELIAALNKVRPPF 241 (356)
T ss_pred ---HHHHHHHHhcCCC
Confidence 7888888776555
No 253
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.49 E-value=1.5e-12 Score=130.65 Aligned_cols=227 Identities=15% Similarity=0.102 Sum_probs=132.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh----c
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----L 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al----l 189 (385)
-+|.|.+++...+......+ . .+ .++...+ ..++++++++.+. .+.+.||++|+..++.++ .
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~---~-~~-~~~~~~~----la~~l~~~~~~~~-----v~~~~sGseA~~~al~~ar~~~~ 113 (389)
T PRK01278 48 AHPHLVEALKEQAEKLWHVS---N-LY-RIPEQER----LAERLVENSFADK-----VFFTNSGAEAVECAIKTARRYHY 113 (389)
T ss_pred CCHHHHHHHHHHHHhcCccc---c-cc-CChHHHH----HHHHHHhhCCCCE-----EEEcCCcHHHHHHHHHHHHHHHH
Confidence 36888888877765322111 1 11 2232223 3456777776543 366789999999998776 5
Q ss_pred cCCC----EEeecCCCCCccccCCccccccccccCcceEEEEec-cccCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 190 KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDES---TGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 190 ~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~---~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
++|| +|++.++.+.|+.. + .....+.......+ +..++ -...|++++++.++. ++++|++++.+
T Consensus 114 ~~G~~~r~~vi~~~~~yhg~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~avivep~~ 185 (389)
T PRK01278 114 GKGHPERYRIITFEGAFHGRTL-A------TIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITP-NTAAILIEPIQ 185 (389)
T ss_pred hcCCCCCCEEEEECCCcCCCcH-H------HHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCC-CeEEEEEeccc
Confidence 6787 89988865433211 0 11111210000001 01100 012689999998864 78999988654
Q ss_pred CCC------CCCHHHHHHHHHHcCcEEEEeccccccccccCccc-C-CCC-CCcEEEECCCccC-ccccEEEEEEeCCCC
Q 016668 262 YPR------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (385)
Q Consensus 262 ~~~------~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~-p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~ 331 (385)
++. ..++++|+++|+++|++||+|++|. |+...|... . .+. ..|++ |++|.+ +|++.|++++++
T Consensus 186 ~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~--- 259 (389)
T PRK01278 186 GEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC-GMGRTGKLFAHEWAGVTPDIM--AVAKGIGGGFPLGACLATE--- 259 (389)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCcceeecccCCCCCEE--EEehhccCCcceEEEEEcH---
Confidence 321 2268999999999999999999984 654333211 1 111 24554 678998 567889999887
Q ss_pred chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 332 ~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.........+ .++...++...+++.+.++++
T Consensus 260 ---~~~~~~~~~~~~~t~~-~~~~~~aaa~a~l~~l~~~~~ 296 (389)
T PRK01278 260 ---EAAKGMTPGTHGSTYG-GNPLAMAVGNAVLDVILAPGF 296 (389)
T ss_pred ---HHHhccCCCCCCCCCC-ccHHHHHHHHHHHHHHhhhHH
Confidence 5666665443333333 344444555556766544444
No 254
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.49 E-value=2.8e-13 Score=134.40 Aligned_cols=164 Identities=21% Similarity=0.241 Sum_probs=115.4
Q ss_pred HHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCC-CEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 155 KRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
+.+++++|++.+ +|.+++|+ +++..++.++++|| |+|++.+|.+..+.. .+...|..+..++ ++
T Consensus 67 ~aia~~~~~~~~----~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~~--------~~~~~g~~v~~v~--~~ 132 (354)
T PRK04635 67 NAYSAYAGVAPE----QILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYAI--------SAETFNVGVKALP--LT 132 (354)
T ss_pred HHHHHHhCcCHH----HEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHH--------HHHHcCCEEEEEe--cC
Confidence 346678899875 57777877 49999999999999 899999887654321 2345676555555 54
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHc-CcEEEEeccccccccccCcccCCCC-CCc-E
Q 016668 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YCD-V 307 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~-ga~livD~ah~~Gli~~g~~~~p~~-gaD-i 307 (385)
+++.+|.+.+++ + .++|+|+++.++|| ...+.+++.++++.. +++|++|+++. .+........... ... +
T Consensus 133 -~~~~~~~~~l~~-~--~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~-~~~~~~s~~~~~~~~~~~i 207 (354)
T PRK04635 133 -ADYQLPLDYIEQ-L--DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYI-EFCPEYSVADLLASYPNLV 207 (354)
T ss_pred -CCCCCCHHHHHh-c--cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchH-hhccCcchHHHHhhCCCEE
Confidence 246789998873 3 37899999888876 577889999988764 79999999974 3321110111111 122 6
Q ss_pred EEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 308 v~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
++.|+||++ +|.|.|+++.++ ++.+.+...
T Consensus 208 v~~S~SK~~~l~GlRlG~~i~~~------~~~~~l~~~ 239 (354)
T PRK04635 208 VLRTLSKAFALAGARCGFTLANE------ELIEILMRV 239 (354)
T ss_pred EEechHHHhhhhHHHHhhhhCCH------HHHHHHHhh
Confidence 789999996 688889999887 677777654
No 255
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.49 E-value=2.6e-12 Score=129.12 Aligned_cols=239 Identities=17% Similarity=0.178 Sum_probs=156.1
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc-C
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-P 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~-p 191 (385)
.+|+..+++|.. |...|+|.+.+.+||+ .++++||.++ .+.+.+|..++..++..+++ |
T Consensus 54 apS~~m~aAM~~-----------GDD~Y~gdpSv~~Lee----~vael~G~E~-----alpthqGRgaE~Il~~~~~~~~ 113 (467)
T TIGR02617 54 AVTQSMQAAMMR-----------GDEAYSGSRSYYALAE----SVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKR 113 (467)
T ss_pred CCCHHHHHHHHc-----------CCcccccCchHHHHHH----HHHHHhCCce-----EEECCCCchHHHHHHHhhcccc
Confidence 468888888763 2223667777778886 5778999987 36678999999999999998 8
Q ss_pred CCEEeecCC----CCCccccCCccccccccccCcceEEEEec------ccc-CCCCCCCHHHHHHHhhhcCC---cEE--
Q 016668 192 HDRIMGLDL----PHGGHLSHGFMTPKRRVSGTSIYFESMPY------RLD-ESTGLVDYDMLEKTAILFRP---KLI-- 255 (385)
Q Consensus 192 GD~Vl~~~~----~~ggh~s~~~~~~~~~~~~~g~~~~~i~~------~~~-~~~~~iD~d~le~~i~~~~p---klI-- 255 (385)
||++.+-.. .|..|+.- ....+.+.|.....++. .++ +..|.+|+++|++.+++..+ -.+
T Consensus 114 g~e~g~~~~~~~v~hn~~fet----t~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~ 189 (467)
T TIGR02617 114 EQEKGLDRSKMVAFSNYFFDT----TQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVA 189 (467)
T ss_pred cccccccccccccceEEEEec----chHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeee
Confidence 998885443 23222221 01123455654333221 111 23578999999999975322 222
Q ss_pred -EEcCCCCCCCC---CHHHHHHHHHHcCcEEEEecccccc-c--------cccCcccCC-----CCCCcEEEECCCccCc
Q 016668 256 -IAGASAYPRDF---DYPRMRQIADAVGALLMMDMAHISG-L--------VAASVVADP-----FKYCDVVTTTTHKSLR 317 (385)
Q Consensus 256 -i~~~s~~~~~~---dl~~I~~ia~~~ga~livD~ah~~G-l--------i~~g~~~~p-----~~gaDiv~~S~hK~l~ 317 (385)
+++++..|.++ +++++.++|+++|+.++.|+|-..- . .+.+.-+.. +.++|.++.|++|-+.
T Consensus 190 tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglg 269 (467)
T TIGR02617 190 TITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAM 269 (467)
T ss_pred eEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCC
Confidence 23333344444 4678889999999999999975432 1 122221111 2589999999999998
Q ss_pred cccEEEEEEeCCCCchhHHHHHHhhcc--CC--CccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 318 GPRGGMIFFKKDPVLGVELESAINNAV--FP--GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 318 GprgG~I~~~~~~~~~~~~~~~i~~~~--fp--~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
.|-||+++++++. +.++.++....+ +- .+.||..-.-+.|+|+.|.|...++|..|+-
T Consensus 270 ApvGg~Lag~d~~--~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri 331 (467)
T TIGR02617 270 VPMGGLLCFKDDS--FFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRI 331 (467)
T ss_pred CcccceEEecchh--HHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHH
Confidence 8999999999861 002333332221 11 2367888899999999999999999966653
No 256
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.48 E-value=6.7e-12 Score=126.68 Aligned_cols=198 Identities=14% Similarity=0.129 Sum_probs=121.4
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCC----CCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYS----EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~----~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs 178 (385)
++|-..++ .+++.|.+++...+.+... .+|.. ..|.+ .+++.+++++.+ .+++.+ +|.+++|+
T Consensus 36 i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p---~~g~~---~lr~aia~~~~~-~~~~~d----~I~it~Ga 104 (402)
T TIGR03542 36 IRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGP---EQGYP---FLREAIAENDYR-GRIDPE----EIFISDGA 104 (402)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCC---CCCCH---HHHHHHHHHHHh-cCCCHH----HEEECCCc
Confidence 44543343 3688899998877654211 12321 12444 566555444322 156653 56777776
Q ss_pred H-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcc---------eEEEEeccccCC-CCCCCHHHHHHHh
Q 016668 179 P-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI---------YFESMPYRLDES-TGLVDYDMLEKTA 247 (385)
Q Consensus 179 ~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~---------~~~~i~~~~~~~-~~~iD~d~le~~i 247 (385)
. ++.. +..++.|||+|++.+|.|.++.. .....|. +.+.++++.+++ ...+|+++
T Consensus 105 ~~al~~-l~~l~~~gd~Vlv~~P~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----- 170 (402)
T TIGR03542 105 KCDVFR-LQSLFGSDNTVAVQDPVYPAYVD--------SNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE----- 170 (402)
T ss_pred HHHHHH-HHHhcCCCCEEEEeCCCCcchHH--------HHHHcCCccccccccccceEEEeecchhhCCCCCccc-----
Confidence 5 6665 46778999999999997765432 2233444 003333334422 23444321
Q ss_pred hhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CC-Cc--EEEECCCccC
Q 016668 248 ILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY-CD--VVTTTTHKSL 316 (385)
Q Consensus 248 ~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~g-aD--iv~~S~hK~l 316 (385)
..++|+|+++.++||+ ..+ +++|.++|+++|++||+|+++ ..+...+..+.++ +. .+ +++.|++|.|
T Consensus 171 -~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y-~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~ 248 (402)
T TIGR03542 171 -EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAY-SAFISDPSLPHSIFEIPGAKECAIEFRSFSKTA 248 (402)
T ss_pred -cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchh-hhhccCCCCCcchhhCCCCcccEEEEecCcccc
Confidence 1368999888888873 444 788999999999999999997 4554433222222 22 22 5689999987
Q ss_pred --ccccEEEEEEeCC
Q 016668 317 --RGPRGGMIFFKKD 329 (385)
Q Consensus 317 --~GprgG~I~~~~~ 329 (385)
+|.|.|+++++++
T Consensus 249 g~pGlRiG~~i~~~~ 263 (402)
T TIGR03542 249 GFTGVRLGWTVVPKE 263 (402)
T ss_pred CCCCcceEEEEecHH
Confidence 7889999999874
No 257
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.48 E-value=1.3e-12 Score=126.87 Aligned_cols=205 Identities=19% Similarity=0.242 Sum_probs=134.8
Q ss_pred cCCCCC--cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHH
Q 016668 109 ASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (385)
Q Consensus 109 asen~~--s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~ 186 (385)
.|+|.+ .|+++++|...-. .+..-|+..+...++|+ +++++||... .+++.|||+||..++.
T Consensus 5 ~SDn~~g~~~~m~eam~~a~~-------~~~~~YG~D~~~~~~e~----~~ae~~g~~a-----~~Fv~sGT~aN~lal~ 68 (342)
T COG2008 5 RSDNVAGPTPEMREALAAANA-------VGDDVYGEDPTTNALEQ----RIAELFGKEA-----ALFVPSGTQANQLALA 68 (342)
T ss_pred ccCccCCCCHHHHHHHHhccc-------cCCCCCCCCHHHHHHHH----HHHHHhCCce-----EEEecCccHHHHHHHH
Confidence 577775 8999999875421 12223655565666654 7899999843 4677899999999999
Q ss_pred HhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc------CCcEEEEcCC
Q 016668 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPKLIIAGAS 260 (385)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~------~pklIi~~~s 260 (385)
+.++||+.|++-.. +|.. .-....+.+.+.. ..++. ++..+|.+++|+|+..++.. +|++++.+..
T Consensus 69 ~~~~~~~~vi~~~~---aHi~---~~E~Ga~~~~~~~-~~~~~-~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~ 140 (342)
T COG2008 69 AHCQPGESVICHET---AHIY---TDECGAPEFFGGG-QKLPI-VPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTA 140 (342)
T ss_pred HhcCCCCeEEEecc---ccce---ecccCcHHHHcCC-ceecc-CCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeecc
Confidence 99999999998764 3322 1111233333321 22221 22257899999999977531 2344444332
Q ss_pred -CCCCCCC---HHHHHHHHHHcCcEEEEeccccc-cccccCcccCCCC-CCcEEEECCCccCccccEEEEEEeCCCCchh
Q 016668 261 -AYPRDFD---YPRMRQIADAVGALLMMDMAHIS-GLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 261 -~~~~~~d---l~~I~~ia~~~ga~livD~ah~~-Gli~~g~~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~ 334 (385)
..|...+ +++|.++||++|+.|+.|+|... .+++.|..-..+. ++|++++.++|.+..|-|.+++++.
T Consensus 141 te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~------ 214 (342)
T COG2008 141 TEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNR------ 214 (342)
T ss_pred CCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCH------
Confidence 2365555 66778899999999999998643 3343341111122 8999999999998777778888887
Q ss_pred HHHHHHhhc
Q 016668 335 ELESAINNA 343 (385)
Q Consensus 335 ~~~~~i~~~ 343 (385)
++.+++++.
T Consensus 215 ~~~~~a~~~ 223 (342)
T COG2008 215 DFAKRARRW 223 (342)
T ss_pred HHHHHHHHH
Confidence 566665543
No 258
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.48 E-value=1.6e-12 Score=129.02 Aligned_cols=203 Identities=16% Similarity=0.158 Sum_probs=131.1
Q ss_pred cccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HH
Q 016668 105 LELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP-AN 181 (385)
Q Consensus 105 l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~ 181 (385)
++|-..+|. +++.+.+++.+.+.. ..+||.. + ..+++ +.++++++++.+ +|.+++|+. ++
T Consensus 22 ~~l~~~~~~~~~p~~~~~a~~~~~~~--~~~Y~~~----~---~~~lr----~~ia~~~~~~~~----~i~it~Ga~~~l 84 (354)
T PRK06358 22 LDFSANINPLGVPESLKQAITENLDK--LVEYPDP----D---YLELR----KRIASFEQLDLE----NVILGNGATELI 84 (354)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHh--hhcCCCc----c---HHHHH----HHHHHHhCCChh----hEEECCCHHHHH
Confidence 455444443 478899998876532 2234431 1 12444 456777888874 566777775 88
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
..++.++ .+ |+|++.+|.++.+.. .+...|..+..++ ++.+ .+.+| +++.+.+.. ++|+|++..|
T Consensus 85 ~~~~~~~-~~-~~v~i~~P~y~~~~~--------~~~~~g~~~~~~~--~~~~~~~~~d-~~~~~~~~~-~~~~v~~~~P 150 (354)
T PRK06358 85 FNIVKVT-KP-KKVLILAPTFAEYER--------ALKAFDAEIEYAE--LTEETNFAAN-EIVLEEIKE-EIDLVFLCNP 150 (354)
T ss_pred HHHHHHh-CC-CcEEEecCChHHHHH--------HHHHcCCeeEEEe--CccccCCCcc-HHHHHhhcc-CCCEEEEeCC
Confidence 8777775 45 688888887654421 2345566544444 4433 34788 666665644 6899887778
Q ss_pred CCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC---CCc--EEEECCCccC--ccccEEEEEEeC
Q 016668 261 AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---YCD--VVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 261 ~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~---gaD--iv~~S~hK~l--~GprgG~I~~~~ 328 (385)
+||+ ..+ +++|.++|+++|+++|+|+++ ..+...+..++++. ..+ +++.|++|++ +|.|.|+++..+
T Consensus 151 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~ 229 (354)
T PRK06358 151 NNPTGQLISKEEMKKILDKCEKRNIYLIIDEAF-MDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN 229 (354)
T ss_pred CCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcc-cccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC
Confidence 8773 443 778888999999999999996 45554432222222 223 6789999996 789999998864
Q ss_pred CCCchhHHHHHHhhcc
Q 016668 329 DPVLGVELESAINNAV 344 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~ 344 (385)
+ ++.+.+....
T Consensus 230 ~-----~~~~~~~~~~ 240 (354)
T PRK06358 230 K-----NLAEKLLQMR 240 (354)
T ss_pred H-----HHHHHHHHhC
Confidence 3 5666666543
No 259
>PRK07505 hypothetical protein; Provisional
Probab=99.48 E-value=6.8e-12 Score=126.64 Aligned_cols=228 Identities=14% Similarity=0.127 Sum_probs=130.4
Q ss_pred cHHHHHHHhhHhhccCC-CCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 115 SRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~-~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
+|.|++++...+. ++. .++...+.....+ +...+++++++++|. . .+.++||+.|+..++..+.
T Consensus 62 ~p~v~~A~~~~l~-~~g~~~~~~~~~~~~~~----~~~~l~~~la~~~~~-~-----~~~~~sG~~a~~~ai~~~~~~~~ 130 (402)
T PRK07505 62 HPAIIEGAVDALK-RTGSLHLSSSRTRVRSQ----ILKDLEEALSELFGA-S-----VLTFTSCSAAHLGILPLLASGHL 130 (402)
T ss_pred CHHHHHHHHHHHH-HhCCCCCCccchhhhhH----HHHHHHHHHHHHhCC-C-----EEEECChHHHHHHHHHHHHhccc
Confidence 8999999988775 332 1111111111223 233355678899987 3 3567899999987775432
Q ss_pred cCCCE-EeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC
Q 016668 190 KPHDR-IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF 266 (385)
Q Consensus 190 ~pGD~-Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~ 266 (385)
.+|+. |++.+. ..|.+. .........+.. +..++. .|++++++.++. +++++++..+++| ...
T Consensus 131 ~~~~~~vi~~~~--~~H~s~---~~~~~~~~~~~~--v~~~~~------~d~~~l~~~~~~-~~~~~vl~~p~~~~G~~~ 196 (402)
T PRK07505 131 TGGVPPHMVFDK--NAHASL---NILKGICADETE--VETIDH------NDLDALEDICKT-NKTVAYVADGVYSMGGIA 196 (402)
T ss_pred CCCCCCEEEEch--hhhHhH---HhhhhhhhcCCe--EEEeCC------CCHHHHHHHHhc-CCCEEEEEecccccCCcC
Confidence 22332 444432 222221 100111112222 233222 489999998854 4677766655554 577
Q ss_pred CHHHHHHHHHHcCcEEEEeccccccccc-cCcc-c-CCCC--CCc--EEEECCCccCccccEEEEEEeCCCCchhHHHHH
Q 016668 267 DYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-A-DPFK--YCD--VVTTTTHKSLRGPRGGMIFFKKDPVLGVELESA 339 (385)
Q Consensus 267 dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~~-~-~p~~--gaD--iv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~ 339 (385)
++++|.++|+++|++||+|++|..+... .|.. . ..+. ..| +++.|++|.+.++ ||+++..++ ++.+.
T Consensus 197 ~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~-Gg~~~~~~~-----~~~~~ 270 (402)
T PRK07505 197 PVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS-GGVIMLGDA-----EQIEL 270 (402)
T ss_pred CHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc-CeEEEeCCH-----HHHHH
Confidence 8999999999999999999998643221 1211 0 1111 123 6788999998654 788776443 67777
Q ss_pred HhhccCCCcc-CCChHHHHHHHHHHHHHhhCchHH
Q 016668 340 INNAVFPGLQ-GGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 340 i~~~~fp~~q-g~p~~~~iaala~Al~e~~~~~~~ 373 (385)
+.....+... ++++...+++...+++.+..+.+.
T Consensus 271 ~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~ 305 (402)
T PRK07505 271 ILRYAGPLAFSQSLNVAALGAILASAEIHLSEELD 305 (402)
T ss_pred HHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcH
Confidence 7654444333 345556666666666544444333
No 260
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.47 E-value=1.2e-12 Score=127.56 Aligned_cols=238 Identities=20% Similarity=0.216 Sum_probs=165.8
Q ss_pred hccccccCCCCC----cHHHHHHHhhHhhccCCCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc
Q 016668 103 KSLELIASENFT----SRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (385)
Q Consensus 103 ~~l~Liasen~~----s~~V~~al~s~l~~~y~~g~p~~r~~~G~-~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG 177 (385)
+.+.+..|+.|. .|.|++|+...+ ++|..|-.|-|...|+ .+..+||+ .++++-+-+. .+.++|.
T Consensus 171 k~VtVWCSNDYLgms~Hp~V~~A~~~tl-~~hG~GAGGTRNIsG~s~~hv~LE~----eLA~LHqK~a-----ALlFsSC 240 (570)
T KOG1360|consen 171 KKVTVWCSNDYLGMSRHPEVLDAMHDTL-DRHGAGAGGTRNISGHSKHHVRLEA----ELADLHQKEA-----ALLFSSC 240 (570)
T ss_pred CceEEEecCccccccCChHHHHHHHHHH-HHcCCCcCCccccCCCCchhhhHHH----HHHHHhcCcc-----eeeeeee
Confidence 445666777776 899999999887 5676787888887775 45557776 4777777665 3667888
Q ss_pred HHHHHHHHHHh--ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc---CC
Q 016668 178 SPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RP 252 (385)
Q Consensus 178 s~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~---~p 252 (385)
..||-..+..| .-||-+|.....+|. + +. ..++-++. ...-++ +.|+++|+++++.. .|
T Consensus 241 fVANDstLftLak~lpgcei~SD~gNHA---S---MI--~GIrns~v--~K~IFr------HND~~hL~~lL~~~~~svP 304 (570)
T KOG1360|consen 241 FVANDSTLFTLAKKLPGCEIFSDEGNHA---S---MI--QGIRNSRV--PKHIFR------HNDLDHLEQLLQSSPKSVP 304 (570)
T ss_pred eeccchHHHHHHHHCCCcEEeccccchH---H---HH--HHhhhcCC--cceeec------cCCHHHHHHHHHhCCCCCC
Confidence 88999988888 448888887654332 2 11 12222222 112222 45899999998653 47
Q ss_pred cEEEEcC--CCCCCCCCHHHHHHHHHHcCcEEEEecccccccccc---Cc--ccCCCCCCcEEEECCCccCccccEEEEE
Q 016668 253 KLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA---SV--VADPFKYCDVVTTTTHKSLRGPRGGMIF 325 (385)
Q Consensus 253 klIi~~~--s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~---g~--~~~p~~gaDiv~~S~hK~l~GprgG~I~ 325 (385)
|+|.+.. |..+...|+++|.++|++||++.++|+.|+.|+... |. .+..+...|++++++-|.| |--||+|.
T Consensus 305 KivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKaf-GcVGGYIA 383 (570)
T KOG1360|consen 305 KIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAF-GCVGGYIA 383 (570)
T ss_pred ceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhc-ccccceeh
Confidence 8887754 345678899999999999999999999999998753 21 2222336899999999997 67889998
Q ss_pred EeCCCCchhHHHHHHhhccCCCcc-CCChHHHHHHHHHHHHHhhCchHH
Q 016668 326 FKKDPVLGVELESAINNAVFPGLQ-GGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~fp~~q-g~p~~~~iaala~Al~e~~~~~~~ 373 (385)
... ++.+.+++..--.++ .+..+..+++...|.+....+|.+
T Consensus 384 at~------~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~ 426 (570)
T KOG1360|consen 384 ATR------KLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGR 426 (570)
T ss_pred hhh------hHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhH
Confidence 887 688888765422222 234456666666677766666554
No 261
>PRK08637 hypothetical protein; Provisional
Probab=99.45 E-value=4.7e-12 Score=127.21 Aligned_cols=172 Identities=17% Similarity=0.139 Sum_probs=107.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCcccccccc-
Q 016668 141 GGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRV- 217 (385)
Q Consensus 141 ~G~~~~~~le~~~~~~la~lfg-~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~- 217 (385)
.|.+ .+++...+++.+..+ .+..++ .+|..++|+ +|+..++.++++|||+|++.+|.|+.+.. .+
T Consensus 44 ~G~~---~lr~~ia~~~~~~~~~~~~~~~-~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~--------~~~ 111 (388)
T PRK08637 44 QGIP---ELRDLWQEKMLRENPSLSGKKM-SLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKL--------TFN 111 (388)
T ss_pred CCCH---HHHHHHHHHHhccCcccccccc-ceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHH--------HHH
Confidence 4544 566555555544332 222111 135566665 59988999999999999999997655432 11
Q ss_pred ccCcceEEEEeccccCCCCCCCHHHHHHHhh--hcCC-cEEEEcCCCCCC--CCC---HHHHHHHHHH-----cCcEEEE
Q 016668 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAI--LFRP-KLIIAGASAYPR--DFD---YPRMRQIADA-----VGALLMM 284 (385)
Q Consensus 218 ~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~--~~~p-klIi~~~s~~~~--~~d---l~~I~~ia~~-----~ga~liv 284 (385)
...|..+. ++++..+++.+|++++++.++ ..++ ++++++.++||+ ..+ +++|.++|++ ++++||+
T Consensus 112 ~~~g~~vv--~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~ 189 (388)
T PRK08637 112 TRRGAEIV--TYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVV 189 (388)
T ss_pred HhcCCEEE--EecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEe
Confidence 23565444 444532345689999998875 1233 456677778874 333 6677777765 8999999
Q ss_pred eccccccccccCcccCC-C----C-CCcE---EEECCCccC--ccccEEEEEEe
Q 016668 285 DMAHISGLVAASVVADP-F----K-YCDV---VTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 285 D~ah~~Gli~~g~~~~p-~----~-gaDi---v~~S~hK~l--~GprgG~I~~~ 327 (385)
|+++ .++.+.+....+ + + ...+ .+.|++|.+ +|.|.|+++..
T Consensus 190 De~Y-~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 190 DDAY-FGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred cccc-hhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 9996 566554421111 1 1 1133 234999964 88999999865
No 262
>PLN02590 probable tyrosine decarboxylase
Probab=99.44 E-value=1e-11 Score=129.42 Aligned_cols=177 Identities=20% Similarity=0.154 Sum_probs=119.0
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCC----cceeecCCcHHHHHHHHHHhcc-----------CCCEEeecCCCCCcccc
Q 016668 143 NEYIDELETLCQKRALAAFNLDENKW----GVNVQPLSGSPANFEVYTAILK-----------PHDRIMGLDLPHGGHLS 207 (385)
Q Consensus 143 ~~~~~~le~~~~~~la~lfg~~~~~~----~~~V~~~sGs~A~~~a~~all~-----------pGD~Vl~~~~~~ggh~s 207 (385)
.+...++|+.+.+|+++++|.+...| +--+++++||+||+.++.+.-+ |.=.|++.+. .|.|
T Consensus 165 sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~---aH~S 241 (539)
T PLN02590 165 SPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ---THSS 241 (539)
T ss_pred CchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC---chHH
Confidence 34456899999999999999986311 1235577889999887765421 1112333332 3433
Q ss_pred CCccccccccccCcce---EEEEeccccC-CCCCCCHHHHHHHhhhc-----CCcEEEE--cCCCCCCCCCHHHHHHHHH
Q 016668 208 HGFMTPKRRVSGTSIY---FESMPYRLDE-STGLVDYDMLEKTAILF-----RPKLIIA--GASAYPRDFDYPRMRQIAD 276 (385)
Q Consensus 208 ~~~~~~~~~~~~~g~~---~~~i~~~~~~-~~~~iD~d~le~~i~~~-----~pklIi~--~~s~~~~~~dl~~I~~ia~ 276 (385)
. .+.+...|.. +..++ +|. +++.+|+++|++.+++. .|-+|+. |.+.++..-|+++|+++|+
T Consensus 242 v-----~KAa~ilGlg~~~vr~Vp--~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~ 314 (539)
T PLN02590 242 F-----RKACLIGGIHEENIRLLK--TDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAK 314 (539)
T ss_pred H-----HHHHHHcCCCcccEEEEe--CCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHH
Confidence 2 1455666663 44455 553 35689999999998653 2555543 4566777889999999999
Q ss_pred HcCcEEEEeccccccccccCccc---CCCCCCcEEEECCCccCcccc-EEEEEEeCC
Q 016668 277 AVGALLMMDMAHISGLVAASVVA---DPFKYCDVVTTTTHKSLRGPR-GGMIFFKKD 329 (385)
Q Consensus 277 ~~ga~livD~ah~~Gli~~g~~~---~p~~gaDiv~~S~hK~l~Gpr-gG~I~~~~~ 329 (385)
++|+||++|+|++.......... ..++.+|-++..+|||+..|- +|++++++.
T Consensus 315 ~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~ 371 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDR 371 (539)
T ss_pred HhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCH
Confidence 99999999999854333222211 223478999999999997775 488888774
No 263
>PRK07908 hypothetical protein; Provisional
Probab=99.43 E-value=1.4e-11 Score=121.80 Aligned_cols=198 Identities=14% Similarity=0.129 Sum_probs=125.9
Q ss_pred hccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-H
Q 016668 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-P 179 (385)
Q Consensus 103 ~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~ 179 (385)
..++|...+| .+++.+++++...+.+. .+||.. .|.+ +++ +.+++++|++.+ +|.+++|+ +
T Consensus 23 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~~---~g~~---~lr----~aia~~~~~~~~----~I~it~Ga~~ 86 (349)
T PRK07908 23 GLLDFAVNVRHDTPPEWLRERLAARLGDL--AAYPST---EDER---RAR----AAVAARHGRTPD----EVLLLAGAAE 86 (349)
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHhhHh--hcCCCc---cchH---HHH----HHHHHHhCcChh----hEEECCCHHH
Confidence 4466655555 36888999988765432 235441 2322 344 456777898774 56667766 4
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
|+..++. ++||| +++..|.+..+. ..+...|..+..+ ++++ ++.+|++.++ .++|+|++..
T Consensus 87 al~~~~~--l~~~~-viv~~P~y~~~~--------~~~~~~G~~i~~v--~~~~-~~~~d~~~l~-----~~~~~i~l~n 147 (349)
T PRK07908 87 GFALLAR--LRPRR-AAVVHPSFTEPE--------AALRAAGIPVHRV--VLDP-PFRLDPAAVP-----DDADLVVIGN 147 (349)
T ss_pred HHHHHHh--cCCCe-EEEeCCCChHHH--------HHHHHcCCEEEee--ccCc-ccCcChhHhc-----cCCCEEEEcC
Confidence 8877766 67865 555666554321 1334567654444 4553 3678887552 2688988877
Q ss_pred CCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC--CCCc-EEEECCCccC--ccccEEEEEEeCCCCc
Q 016668 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--KYCD-VVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 260 s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~--~gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~ 332 (385)
++|| ...+.++|.++|++ +.++|+|++|. .++. +..++.. +..+ +++.|+||++ +|.|.|+++.++
T Consensus 148 p~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~-~~~~-~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~---- 220 (349)
T PRK07908 148 PTNPTSVLHPAEQLLALRRP-GRILVVDEAFA-DAVP-GEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAP---- 220 (349)
T ss_pred CCCCCCCCcCHHHHHHHHhc-CCEEEEECcch-hhcc-CCccccccccCCCEEEEeecccccCCccceeeeeecCH----
Confidence 7776 57788999999975 78899999974 3332 2222211 2224 5678999976 689999999876
Q ss_pred hhHHHHHHhhcc
Q 016668 333 GVELESAINNAV 344 (385)
Q Consensus 333 ~~~~~~~i~~~~ 344 (385)
++.+.+....
T Consensus 221 --~~~~~~~~~~ 230 (349)
T PRK07908 221 --DVLARLTRGR 230 (349)
T ss_pred --HHHHHHHhcC
Confidence 6777776543
No 264
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.43 E-value=7.9e-12 Score=126.54 Aligned_cols=177 Identities=18% Similarity=0.149 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhcc-----CCCEEee-cCCCCCccccCCccccccccccC
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILK-----PHDRIMG-LDLPHGGHLSHGFMTPKRRVSGT 220 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~-----pGD~Vl~-~~~~~ggh~s~~~~~~~~~~~~~ 220 (385)
++++.+++++.+.+|.+-. + -+|.+++|+. |+..++.++++ |||.|++ .+|.+.++...... .. ...
T Consensus 78 ~LR~aia~~~~~~~g~~v~-~-~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~---~~-~~~ 151 (416)
T PRK09440 78 ELIEALAALLNERYGWNIS-P-QNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE---ED-LFV 151 (416)
T ss_pred HHHHHHHHHHHHHhCCCCC-h-hhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc---cC-cee
Confidence 6777788888888775431 1 2577788775 88888888885 6999999 68887765431100 00 011
Q ss_pred cceEEEEeccccCC--CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEecccccccc
Q 016668 221 SIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLV 293 (385)
Q Consensus 221 g~~~~~i~~~~~~~--~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli 293 (385)
+.....++ ++.+ ...+|+++++ + ..++++|+++.++||+ ..+ +++|.++|+++++++|+|+++... .
T Consensus 152 ~~~~~~~~--~~~~~~~~~~d~~~l~--~-~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~ 225 (416)
T PRK09440 152 SYRPNIEL--LPEGQFKYHVDFEHLH--I-DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP-F 225 (416)
T ss_pred eccccccc--ccccccccCCCHHHcc--c-CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc-C
Confidence 11112223 2222 2468999987 3 3367899888888873 444 678889999999999999997421 1
Q ss_pred ccCc-ccCCCCC-Cc--EEEECCCcc-CccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 294 AASV-VADPFKY-CD--VVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 294 ~~g~-~~~p~~g-aD--iv~~S~hK~-l~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
... ....... .+ |++.|++|+ ++|.|.|++++++ ++.+++...
T Consensus 226 -~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~------~l~~~~~~~ 273 (416)
T PRK09440 226 -PGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADE------EIIEALSNM 273 (416)
T ss_pred -CCcchhhcCccccCCeEEEecccccCCCcceEEEEeCCH------HHHHHHHHH
Confidence 110 0010011 12 678999997 4889999999877 566666544
No 265
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.43 E-value=2.3e-11 Score=122.56 Aligned_cols=218 Identities=16% Similarity=0.123 Sum_probs=131.6
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~---- 190 (385)
.|.|.+++.+.+.. +..+.+. + -++...++| +++++++|.+. .+.++||++|+..++..+..
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~~~---~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 59 HPKILAAMVEQAGR-LTLTSRA---F-RNDQLAPLY----EELAALTGSHK-----VLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CHHHHHHHHHHHhh-ccccccc---c-CCHHHHHHH----HHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 68888888777643 3222211 1 133333444 46788888754 46788999999999988742
Q ss_pred -----CC-CEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCCCCCCCHHHHHHHhhhcCC
Q 016668 191 -----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTGLVDYDMLEKTAILFRP 252 (385)
Q Consensus 191 -----pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~~~~iD~d~le~~i~~~~p 252 (385)
+| ++|++.+-.+ ||.... .+...+ ..+..++ ..|++++++.+.+ ++
T Consensus 125 ~~g~~~~~~~vi~~~~~~-----HG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~le~~i~~-~~ 188 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNF-----HGRTLS--IVGFSTDPDARGGFGPFTPGFRVVP--------FGDAEALEAAITP-NT 188 (401)
T ss_pred ccCCCCCCceEEEECCCc-----CCccHH--HHhccCCccccccCCCCCCCeEEeC--------CCCHHHHHHHhCC-Ce
Confidence 23 6777766432 332100 000000 0111111 3589999999864 78
Q ss_pred cEEEEcCCCCC--CCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCcc--ccE
Q 016668 253 KLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRG 321 (385)
Q Consensus 253 klIi~~~s~~~--~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~G--prg 321 (385)
++|+++++.++ ...+ +++|+++|+++|+++|+|++|. |+...|... .... ..|+++++ |+|.| +++
T Consensus 189 ~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~-g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~i 265 (401)
T PRK00854 189 VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQT-GLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPV 265 (401)
T ss_pred EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCchHhHHhhcCCCCCEEEec--ccccCCccCe
Confidence 99999877653 3343 9999999999999999999995 654433211 1122 46887764 99843 478
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|++++++ ++.+.+.........++ ++...++...+|+.+..++.
T Consensus 266 g~v~~~~------~~~~~l~~~~~~~t~~~-~~~~~aa~~a~L~~l~~~~~ 309 (401)
T PRK00854 266 SAVLSNS------EVLGVLKPGQHGSTFGG-NPLACAVARAALKVLTEEGM 309 (401)
T ss_pred EEEEEcH------HHHhcccCCCCCCCCCc-CHHHHHHHHHHHHHHHHcCH
Confidence 9999987 56665543322233333 44555555667766544333
No 266
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.41 E-value=1.8e-11 Score=121.94 Aligned_cols=228 Identities=16% Similarity=0.111 Sum_probs=132.8
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh---cc
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI---LK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al---l~ 190 (385)
.+|.|.+++.+.+.+. . ....+ |. .+ .....++++++++|.+. .+.+.||++|+..++..+ ..
T Consensus 44 ~~p~v~~a~~~~~~~~-~--~~~~~-~~-~~----~~~~l~~~la~~~g~~~-----~~~~~sg~~a~~~a~~~~~~~~~ 109 (379)
T TIGR00707 44 AHPKLVEALKEQLEKL-V--HVSNL-YY-TE----PQEELAEKLVEHSGADR-----VFFCNSGAEANEAALKLARKYTG 109 (379)
T ss_pred CCHHHHHHHHHHHhhc-c--ccccc-cC-CH----HHHHHHHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHhh
Confidence 3588888887766532 1 11112 21 23 23334557889999874 356778999999888755 22
Q ss_pred ----CCCEEeecCCCCCccccCCccccccccccCcce-EEEEeccccCCC-C--CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 191 ----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST-G--LVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 191 ----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~i~~~~~~~~-~--~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
+||+|+++++.+.|+..... ...+.. +.....++..+. . ..|++++++.+.. ++++|++++.++
T Consensus 110 ~~~~~~~~vi~~~~~yh~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~p~~~ 181 (379)
T TIGR00707 110 DKGKEKKKIIAFENSFHGRTMGAL-------SATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD-ETAAVIVEPIQG 181 (379)
T ss_pred ccCCCCCeEEEECCCcCCccHHHH-------HhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh-CeeEEEEEcccc
Confidence 48999999876544321110 001100 000001111111 1 1289999998865 688998865543
Q ss_pred C--C-CC---CHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccEEEEEEeCCCCc
Q 016668 263 P--R-DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 263 ~--~-~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~~ 332 (385)
+ . .. ++++|.++|+++|+++++|++|. |+...+... .... ..|++ +++|++ +|+|.|++++++
T Consensus 182 ~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~-~~~~~g~~~~~~~~~~~~d~~--t~sK~~~~G~riG~~~~~~---- 254 (379)
T TIGR00707 182 EGGVNPASAEFLKALREICKDKDALLIFDEVQT-GIGRTGKFFAYEHYGIEPDII--TLAKGLGGGVPIGATLAKE---- 254 (379)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhhhHHhcCCCCCEE--EEcccccCCcccEEEEEcH----
Confidence 2 1 12 37899999999999999999984 554433211 1112 34655 468998 556889999886
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++.+.+.........+ .+....++...+|+.+...++.
T Consensus 255 --~~~~~~~~~~~~~~~~-~~~~~~~aa~aaL~~~~~~~~~ 292 (379)
T TIGR00707 255 --EVAEAFTPGDHGSTFG-GNPLACAAALAVLEVIEKERLL 292 (379)
T ss_pred --HHHhhhcCCCCCCCCC-CCHHHHHHHHHHHHHHHhhhHH
Confidence 5777665432222223 3445555666677655444443
No 267
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.41 E-value=6.5e-12 Score=123.53 Aligned_cols=158 Identities=20% Similarity=0.223 Sum_probs=105.2
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
.++++++++|.+.+ +|.+++|+. ++.++ ..++++| +|++.+|.|.++.. .+...|. ++++++
T Consensus 52 lr~~la~~~~~~~~----~i~~t~G~~~~i~~~-~~~l~~g-~vl~~~p~y~~~~~--------~~~~~g~--~~~~~~- 114 (330)
T TIGR01140 52 LRAAAAAYYGLPAA----SVLPVNGAQEAIYLL-PRLLAPG-RVLVLAPTYSEYAR--------AWRAAGH--EVVELP- 114 (330)
T ss_pred HHHHHHHHhCCChh----hEEECCCHHHHHHHH-HHHhCCC-eEEEeCCCcHHHHH--------HHHHcCC--EEEEeC-
Confidence 34567788898753 566778876 65554 4557888 68888886654421 2334554 344432
Q ss_pred cCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--C
Q 016668 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (385)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--g 304 (385)
|++++++.++ ++++|++..++|| ...+ +++|.++|+++|+++++|++|. ++..........+ .
T Consensus 115 -------d~~~l~~~~~--~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~-~~~~~~~~~~~~~~~~ 184 (330)
T TIGR01140 115 -------DLDRLPAALE--ELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFI-DFTPDASLAPQAARFP 184 (330)
T ss_pred -------CHHHHHhhcc--cCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccc-ccCCccchhhHhccCC
Confidence 7899998883 5778877777765 4566 6677888899999999999984 3332211111011 2
Q ss_pred CcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
.++++.|++|++ +|.|.|++++++ ++.+++...
T Consensus 185 ~~i~~~S~SK~~g~~G~R~G~i~~~~------~~~~~l~~~ 219 (330)
T TIGR01140 185 GLVVLRSLTKFFGLAGLRLGFVVAHP------ALLARLREA 219 (330)
T ss_pred CEEEEEecchhhcCchhhhhheeCCH------HHHHHHHhc
Confidence 348899999997 556779999987 577777654
No 268
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.40 E-value=2.9e-11 Score=121.76 Aligned_cols=231 Identities=18% Similarity=0.118 Sum_probs=133.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
.+|.|.+++...+.. .. .++.. ++.. ++...+++++++++|.+.+ ..+.+.||++|+..++..+ ..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~-~~~~~--~~~~----~~~~~l~~~l~~~~~~~~~---~v~~~~sgsea~~~al~~~~~~~~ 121 (413)
T cd00610 53 NHPEVVEALKEQLAK-LT-HFSLG--FFYN----EPAVELAELLLALTPEGLD---KVFFVNSGTEAVEAALKLARAYTG 121 (413)
T ss_pred CCHHHHHHHHHHHHh-Cc-CccCc--ccCC----HHHHHHHHHHHHhCCCCCC---EEEEcCcHHHHHHHHHHHHHHHcC
Confidence 478899888877632 11 12110 0012 3344456678999996443 2456788999999999877 468
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccC---CCCCCCHHHHHHHhhh--cCCcE
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDE---STGLVDYDMLEKTAIL--FRPKL 254 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~---~~~~iD~d~le~~i~~--~~pkl 254 (385)
+|+|++.++.+.|+... .+...+ ..+..++++... +....|++++++.++. .++++
T Consensus 122 ~~~ii~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 194 (413)
T cd00610 122 RKKIISFEGAYHGRTLG-------ALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAA 194 (413)
T ss_pred CCeEEEECCCcCCccHH-------HHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEE
Confidence 99999998755332110 011111 112223321000 0123488999998865 24567
Q ss_pred EEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCc-cccEEEE
Q 016668 255 IIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-GPRGGMI 324 (385)
Q Consensus 255 Ii~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~-GprgG~I 324 (385)
|++++..+ +...+ +++|.++|+++|+++++|++|. |+...+.. . ...+ ..|++ |++|++. |.+.|++
T Consensus 195 vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~ 271 (413)
T cd00610 195 VIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT-GFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAV 271 (413)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchhhHhhcCCCCCeE--EEcccccCccccEEE
Confidence 77765332 34445 8999999999999999999985 54222211 1 1112 34665 4559985 4577888
Q ss_pred EEeCCCCchhHHHHHH--hhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 325 FFKKDPVLGVELESAI--NNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 325 ~~~~~~~~~~~~~~~i--~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++++ ++.+.+ ....+....+ .+...+++...+++.+.++++
T Consensus 272 ~~~~------~~~~~~~~~~~~~~~t~~-~~~~~~~a~~a~l~~l~~~~~ 314 (413)
T cd00610 272 LGRE------EIMDAFPAGPGLHGGTFG-GNPLACAAALAVLEVLEEEGL 314 (413)
T ss_pred EEcH------HHHHhhccCCCCCCCCCC-cCHHHHHHHHHHHHHHHhccH
Confidence 8876 576665 2222222233 333445555567766655444
No 269
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.40 E-value=2.7e-12 Score=126.65 Aligned_cols=163 Identities=22% Similarity=0.238 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHH---Hh-ccC----CCEEeecCCCCCccccCCcccccccccc
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AI-LKP----HDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~---al-l~p----GD~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
++-...++|++++.|.|. +.+|+.+|+++-++-++ +. -.. .+.||+++-.||-++. .+.+
T Consensus 109 ~li~~Lq~~L~~ITG~Da----vsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPA--------SAam 176 (496)
T COG1003 109 ELIYELQEWLKEITGMDA----VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPA--------SAAM 176 (496)
T ss_pred HHHHHHHHHHHHhcCCce----eeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChh--------hHhh
Confidence 344445789999999998 78999999976555443 33 223 3589999988776543 2346
Q ss_pred CcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-C-CCCCHHHHHHHHHHcCcEEEEeccccccccccCc
Q 016668 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-P-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (385)
Q Consensus 220 ~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-~-~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~ 297 (385)
.|. +++.++.+ ++|.+|+|+|++.+.+ +...+.+.+|++ | +..++.+|++|.+++|..|..|+|....++.
T Consensus 177 ~G~--~VV~V~~~-~~G~VDlddLk~k~~~-~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG--- 249 (496)
T COG1003 177 AGF--KVVVVKCD-ENGNVDLDDLRAKAED-NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG--- 249 (496)
T ss_pred cCc--eEEEEecC-CCCCccHHHHHHHhcc-ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhc---
Confidence 664 55555565 5789999999999975 555554444543 4 5678999999999999999999998666552
Q ss_pred ccCCCC-CCcEEEECCCccCccccE------EEEEEeCC
Q 016668 298 VADPFK-YCDVVTTTTHKSLRGPRG------GMIFFKKD 329 (385)
Q Consensus 298 ~~~p~~-gaDiv~~S~hK~l~Gprg------G~I~~~~~ 329 (385)
...|-+ |+||+-..+||||..|.| |-|..++.
T Consensus 250 ~~rPGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~ 288 (496)
T COG1003 250 LARPGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH 288 (496)
T ss_pred cccccccccceEEeecccccccCCCCCCCCCCceehHhh
Confidence 234556 899999999999977765 44555543
No 270
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.38 E-value=2.6e-11 Score=119.80 Aligned_cols=230 Identities=17% Similarity=0.158 Sum_probs=145.4
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCC-CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~-G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
..+..++++++++...+.. +.+= .++- ..+...++.. ..+.+..++|++. .+.+...+.|++.+..++
T Consensus 35 G~s~~~~e~iea~~~~~~~-~v~L----e~~l~~g~~~~R~~~-~~~~~~~~~~aea-----~~ivnnn~aAVll~~~al 103 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRA-PVEL----ETDLKTGKRGARLTE-LAELLCGLTGAEA-----AAIVNNNAAAVLLTLNAL 103 (395)
T ss_pred CCccCCHHHHHHHHHHhcc-ccee----eeecccchhhHHHHH-HHHHHhcccchhh-----eeeECCcHHHHHHHHhhh
Confidence 5677799999998766543 3221 1111 1122333332 2333445555554 233556667888888888
Q ss_pred ccCCCEEeecCCCC-CccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEE-EEcCCCCCCC-
Q 016668 189 LKPHDRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRD- 265 (385)
Q Consensus 189 l~pGD~Vl~~~~~~-ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklI-i~~~s~~~~~- 265 (385)
..++..|+..-+.- |||+.-. ..+...|.++. ..+ +++.-...+.+..+.+ +++++ -+..++|+..
T Consensus 104 ~~~~EvVis~g~lV~gg~~~v~-----d~~~~aG~~l~--EvG---~tn~t~~~d~~~AIne-~ta~llkV~s~~~~f~~ 172 (395)
T COG1921 104 AEGKEVVVSRGELVEGGAFRVP-----DIIRLAGAKLV--EVG---TTNRTHLKDYELAINE-NTALLLKVHSSNYGFTG 172 (395)
T ss_pred ccCCeEEEEccccccCCCCChh-----HHHHHcCCEEE--Eec---ccCcCCHHHHHHHhcc-CCeeEEEEeeccccccc
Confidence 77666655433222 4554322 24567787543 422 2345677888888876 56655 4556667753
Q ss_pred -CCHHHHHHHHHHcCcEEEEeccccccccccCc--ccCCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 266 -FDYPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 266 -~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~--~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
.+.+++++|||++|+.+++|.+ +|...... ....+. |+|+|++|++|.|.||++|+|++++ ++.+++.
T Consensus 173 ~l~~~~l~~ia~~~~lpvivD~a--Sg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkK------elI~~lq 244 (395)
T COG1921 173 MLSEEELVEIAHEKGLPVIVDLA--SGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKK------ELIEKLQ 244 (395)
T ss_pred cccHHHHHHHHHHcCCCEEEecC--CccccccccchhHHHhcCCCEEEEecchhcCCCccceEechH------HHHHHHH
Confidence 4577899999999999999997 44332211 111123 8999999999999999999999999 6777776
Q ss_pred hcc-CCCccCCChHHHHHHHHHHHHHhhCch
Q 016668 342 NAV-FPGLQGGPHNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 342 ~~~-fp~~qg~p~~~~iaala~Al~e~~~~~ 371 (385)
+.. -.++- -...+++|+..||+....++
T Consensus 245 ~~~l~Ralr--v~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 245 SHPLKRALR--VDKETLAALEAALELYLQPE 273 (395)
T ss_pred hhhhhhhhh--cCcHhHHHHHHHHHHHcCch
Confidence 542 12222 34578999999999887754
No 271
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.38 E-value=2.1e-11 Score=120.32 Aligned_cols=195 Identities=17% Similarity=0.139 Sum_probs=123.5
Q ss_pred cccccC--CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC---CCCCCCcceeecCCcHH
Q 016668 105 LELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLSGSP 179 (385)
Q Consensus 105 l~Lias--en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg---~~~~~~~~~V~~~sGs~ 179 (385)
++|-.. +-.+|+.+++++...+.......||.. |. .++++. ++++++ ++++ +|..++|+.
T Consensus 22 i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~----~~---~~Lr~a----ia~~~~~~~~~~~----~i~it~Ga~ 86 (335)
T PRK14808 22 TYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDS----PD---EELIEK----ILSYLDTDFLSKN----NVSVGNGAD 86 (335)
T ss_pred eEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----Ch---HHHHHH----HHHHhCCCCCCcc----eEEEcCCHH
Confidence 444433 344588899998765432211123321 22 355554 555555 5553 567777764
Q ss_pred -HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 180 -ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 180 -A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
++..++.++ |+|++.+|.|.++.. .+...|..+..++ +++ ++.+|.+. + .++++|+++
T Consensus 87 ~~i~~~~~~~----d~v~v~~P~y~~~~~--------~~~~~g~~~~~v~--~~~-~~~~~~~~----~--~~~~~i~i~ 145 (335)
T PRK14808 87 EIIYVMMLMF----DRSVFFPPTYSCYRI--------FAKAVGAKFLEVP--LTK-DLRIPEVN----V--GEGDVVFIP 145 (335)
T ss_pred HHHHHHHHHh----CcEEECCCCHHHHHH--------HHHHcCCeEEEec--CCC-cCCCChhH----c--cCCCEEEEe
Confidence 888888777 789999887654422 3456776554444 543 35554332 2 246899998
Q ss_pred CCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc-EEEECCCccC--ccccEEEEEEeCCCCc
Q 016668 259 ASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD-VVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 259 ~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD-iv~~S~hK~l--~GprgG~I~~~~~~~~ 332 (385)
.++|| ...+.+++.+++ +++++|++|+++. .+. .......+. ... +++.|++|++ +|.|.|++++++
T Consensus 146 nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~-~f~-~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~---- 218 (335)
T PRK14808 146 NPNNPTGHVFEREEIERIL-KTGAFVALDEAYY-EFH-GESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE---- 218 (335)
T ss_pred CCCCCCCCCcCHHHHHHHH-hcCCEEEEECchh-hhc-CCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCH----
Confidence 88886 567889999998 5799999999973 332 111111122 223 6789999997 589999999987
Q ss_pred hhHHHHHHhhcc
Q 016668 333 GVELESAINNAV 344 (385)
Q Consensus 333 ~~~~~~~i~~~~ 344 (385)
++.+.+....
T Consensus 219 --~~~~~l~~~~ 228 (335)
T PRK14808 219 --KFIDAYNRVR 228 (335)
T ss_pred --HHHHHHHHhc
Confidence 6777776544
No 272
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.36 E-value=9.5e-11 Score=117.97 Aligned_cols=234 Identities=18% Similarity=0.112 Sum_probs=131.5
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC-C
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-D 193 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG-D 193 (385)
+|.+.+++...+.. +.. ...+| . .+...+ ..+++++++|.+..+ ..+.+.||++|+..++..+..+| +
T Consensus 61 ~p~v~~ai~~~~~~-~~~--~~~~~-~-~~~~~~----la~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~g~~ 129 (398)
T PRK03244 61 HPAVVEAVTRQLAT-LGH--VSNLF-A-TEPQIA----LAERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARLTGRT 129 (398)
T ss_pred CHHHHHHHHHHHHh-ccC--ccCcc-C-CHHHHH----HHHHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHHHCCC
Confidence 58888888777653 211 11122 1 221222 345788888854211 23556788999999998776676 4
Q ss_pred EEeecCCCCCccccCCccccccccccCcceEEEEecc-ccCC-C--CCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDES-T--GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~-~~~~-~--~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
+|+..+..|.|+.. . .+...|.......+. ...+ . -..|++++++.+.. ++++|+++++.++ ...+
T Consensus 130 ~ii~~~~~yhg~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~aviiep~~~~~G~~~~ 201 (398)
T PRK03244 130 KIVAAEGGFHGRTM-----G--ALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD-DTAAVFLEPIQGEAGVVPP 201 (398)
T ss_pred eEEEECCCcCCccH-----H--HHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcC-CeEEEEEecccCCCCCcCC
Confidence 67666654422210 0 111112110000000 0000 0 02488999988853 6888888766543 3444
Q ss_pred ----HHHHHHHHHHcCcEEEEeccccccccccCccc-CCC-C-CCcEEEECCCccCc-cccEEEEEEeCCCCchhHHHHH
Q 016668 268 ----YPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPF-K-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESA 339 (385)
Q Consensus 268 ----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~p~-~-gaDiv~~S~hK~l~-GprgG~I~~~~~~~~~~~~~~~ 339 (385)
+++|.++|+++|+++|+|++|. |+...|... ... . ..|+++ ++|+|. |.+.|+++.++ ++.+.
T Consensus 202 ~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pDi~t--~sK~l~~G~~ig~~~~~~------~~~~~ 272 (398)
T PRK03244 202 PAGYLAAAREITDRHGALLVLDEVQT-GIGRTGAWFAHQHDGVTPDVVT--LAKGLGGGLPIGACLAFG------PAADL 272 (398)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecccc-CCcccchHHhhhhhCCCCCEEE--EchhhhCCcccEEEEEcH------HHHhh
Confidence 8899999999999999999984 553333211 111 2 357764 469984 56778888887 56666
Q ss_pred HhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 340 INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 340 i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
+.........++ +....++...+|+.+.++++.+..+
T Consensus 273 ~~~~~~~~t~~~-~~~~~aaa~a~l~~~~~~~~~~~~~ 309 (398)
T PRK03244 273 LTPGLHGSTFGG-NPVACAAALAVLDTIASEGLLENAE 309 (398)
T ss_pred ccCCCCcCCCCC-CHHHHHHHHHHHHHHHhccHHHHHH
Confidence 654333333333 3344555555676565555544433
No 273
>PRK08354 putative aminotransferase; Provisional
Probab=99.35 E-value=1.9e-11 Score=119.24 Aligned_cols=176 Identities=16% Similarity=0.063 Sum_probs=115.5
Q ss_pred cccccCCCCC-cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHH
Q 016668 105 LELIASENFT-SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANF 182 (385)
Q Consensus 105 l~Liasen~~-s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~ 182 (385)
++|-..+|+. ++.+.+++...+.. ..+||. + ..+ ++++++++|. +|.+++|+ +|+.
T Consensus 11 i~l~~~~np~~p~~~~~a~~~~~~~--~~~yp~---~------~~l----~~~ia~~~~~-------~I~vt~G~~~al~ 68 (311)
T PRK08354 11 IDFSASVNPYPPEWLDEMFERAKEI--SGRYTY---Y------EWL----EEEFSKLFGE-------PIVITAGITEALY 68 (311)
T ss_pred eEecCCCCCCCCHHHHHHHHHHHHH--hhcCCC---h------HHH----HHHHHHHHCC-------CEEECCCHHHHHH
Confidence 4444454444 67788888655432 224553 1 134 3467777772 35567776 4777
Q ss_pred HHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
.++. ++.|||+|++.+|.|.++.. .+...|..+ +.+ .+|++.+++.++ ++++++++.|+|
T Consensus 69 ~~~~-~~~~gd~vlv~~P~y~~~~~--------~~~~~g~~~--~~~-------~~d~~~l~~~~~--~~~~vi~~~P~N 128 (311)
T PRK08354 69 LIGI-LALRDRKVIIPRHTYGEYER--------VARFFAARI--IKG-------PNDPEKLEELVE--RNSVVFFCNPNN 128 (311)
T ss_pred HHHH-hhCCCCeEEEeCCCcHHHHH--------HHHHcCCEE--eec-------CCCHHHHHHhhc--CCCEEEEecCCC
Confidence 6664 44599999999997765422 334556533 332 368899988875 467787777787
Q ss_pred CC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCC-cEEEECCCccC--ccccEEEEEE
Q 016668 263 PR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYC-DVVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 263 ~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~ga-Div~~S~hK~l--~GprgG~I~~ 326 (385)
|+ .. .+++|.++|+++|+++|+|+++ .++...+.. .... -+++.|++|+| +|.|.|++++
T Consensus 129 PTG~~~~~~~l~~l~~~a~~~~~~li~De~y-~~f~~~~~~---~~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 129 PDGKFYNFKELKPLLDAVEDRNALLILDEAF-IDFVKKPES---PEGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CCCCccCHHHHHHHHHHhhhcCcEEEEeCcc-hhccccccc---cCCCcEEEEeccHhhcCCccceeeeeee
Confidence 73 33 4677788889999999999997 455543321 1222 26789999997 7899999998
No 274
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.35 E-value=2e-11 Score=120.10 Aligned_cols=154 Identities=17% Similarity=0.139 Sum_probs=101.0
Q ss_pred HHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 155 KRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
+.+++.+|.+ +|.+++|+. |+..++ ++.|||+|++.+|.+.++.. .+...|..+. ++++
T Consensus 56 ~~ia~~~~~~------~I~it~Gs~~al~~~~--~~~~gd~v~v~~P~y~~~~~--------~~~~~g~~~~--~v~~-- 115 (330)
T PRK05664 56 AAARAYYGAP------QLLPVAGSQAAIQALP--RLRAPGRVGVLSPCYAEHAH--------AWRRAGHQVR--ELDE-- 115 (330)
T ss_pred HHHHHHhCCC------CEEECcCHHHHHHHHH--HccCCCEEEEcCCChHHHHH--------HHHHcCCeEE--Eech--
Confidence 4567778864 366777775 776553 46899999999997755422 3346676443 3322
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCCC-Cc-
Q 016668 234 STGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY-CD- 306 (385)
Q Consensus 234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~g-aD- 306 (385)
+++++.++ ++|+++++.|+||+ ..+ +++|.++|+++|++||+|+++. ........ ..+.. -.
T Consensus 116 -------~~~~~~~~--~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~-~~~~~~s~-~~~~~~~~v 184 (330)
T PRK05664 116 -------AEVEAALD--SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFM-DNTPQHSL-AACAHRPGL 184 (330)
T ss_pred -------hhHhhhhc--CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcc-cCCCcccc-cccccCCCE
Confidence 34555553 57887777777773 444 5667777889999999999973 32211000 11222 23
Q ss_pred EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccC
Q 016668 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVF 345 (385)
Q Consensus 307 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~f 345 (385)
+++.|++|++ +|.|.|++++++ ++.+.+.....
T Consensus 185 i~~~SfSK~~gl~GlRiG~~v~~~------~l~~~~~~~~~ 219 (330)
T PRK05664 185 IVLRSFGKFFGLAGARLGFVLAEP------ALLRALAELLG 219 (330)
T ss_pred EEEeeccccccCCCcceEEEEeCH------HHHHHHHHhcC
Confidence 6799999997 789999999976 67777765543
No 275
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.34 E-value=2.1e-11 Score=120.03 Aligned_cols=160 Identities=14% Similarity=0.113 Sum_probs=107.4
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++.+++++|.+.. +|..++|+. ++..++. +++||| |++++|.+..+.. .+...|..+..++ ++
T Consensus 46 r~~ia~~~~~~~~----~I~it~Gs~~~l~~~~~-~~~~~~-vv~~~P~y~~y~~--------~~~~~G~~v~~vp--~~ 109 (332)
T PRK06425 46 EDQIKIYTQGLKI----KVLIGPGLTHFIYRLLS-YINVGN-IIIVEPNFNEYKG--------YAFTHGIRISALP--FN 109 (332)
T ss_pred HHHHHHHhCCCcc----eEEECCCHHHHHHHHHH-HhCCCc-EEEeCCChHHHHH--------HHHHcCCeEEEEe--CC
Confidence 3467889999874 577778775 7777765 678875 5555776654322 3456777655555 44
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CC
Q 016668 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KY 304 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~g 304 (385)
. ..+|.+.+++ .++|+|+++.++||+ ..+ +++|.++|+++|++||+|+++ ..+...+. ++.. +.
T Consensus 110 ~--~~~~~~~l~~----~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y-~~~~~~~~-~~~~~~~~~ 181 (332)
T PRK06425 110 L--INNNPEILNN----YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAF-IDFVPNRA-EEDVLLNRS 181 (332)
T ss_pred c--ccCcHHHHhh----cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecch-hccccccc-hhHHHHhcc
Confidence 2 3356555442 378999988888873 444 677788889999999999996 44443221 1111 12
Q ss_pred -Cc-EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 305 -CD-VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 305 -aD-iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
-. +++.|++|++ +|.|.|++++++ ++.+++...
T Consensus 182 ~~~vi~~~SfSK~~~l~GlRiGy~v~~~------~li~~l~~~ 218 (332)
T PRK06425 182 YGNVIIGRSLTKILGIPSLRIGYIATDD------YNMKISRKI 218 (332)
T ss_pred CCCEEEEeecHHhcCCchhhheeeecCH------HHHHHHHHc
Confidence 23 6789999986 788999999987 677777653
No 276
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.33 E-value=1.2e-10 Score=117.46 Aligned_cols=227 Identities=13% Similarity=0.086 Sum_probs=127.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
-+|.|.+++...+.. +.... +.. .++...+ ..++++++++.+. .+++.||++|+.+++.....
T Consensus 57 ~~p~v~~ai~~~~~~-~~~~~---~~~-~~~~~~~----l~~~l~~~~~~~~-----~~~~~SGseA~e~Alk~a~~~~~ 122 (396)
T PRK04073 57 RHPKIIQALKDQADK-VTLTS---RAF-HSDQLGP----WYEKVAKLTGKDM-----VLPMNTGAEAVETAIKAARRWAY 122 (396)
T ss_pred CCHHHHHHHHHHHhh-ccccc---ccc-CCHHHHH----HHHHHHhcCCCCe-----EEEcCChHHHHHHHHHHHHHHhh
Confidence 367888877766542 22111 111 1222223 3456777777543 46688999999998876531
Q ss_pred ------CC-CEEeecCCCCCccccCCccccccccccCcceEEEEecc-ccCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 191 ------PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDES---TGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 191 ------pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~-~~~~---~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+| ++|+..+-.+ ||+... .++..+.......+. ..++ -...|++++++.+.+ ++++|++++
T Consensus 123 ~~~g~~~~r~~ii~~~~~~-----HG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~viiep 194 (396)
T PRK04073 123 DVKGVEPNKAEIIACEGNF-----HGRTMA--AVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITP-NTAAFLVEP 194 (396)
T ss_pred hccCCCCCCCEEEEECCCc-----CCCCHH--HHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhccc-CeEEEEEcC
Confidence 34 7788776432 332100 111111100000000 0000 002378999988854 688899887
Q ss_pred CCCC--CCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCcc--ccEEEEEEeC
Q 016668 260 SAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (385)
Q Consensus 260 s~~~--~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~G--prgG~I~~~~ 328 (385)
+.++ ...+ +++|.++|+++|+++++|++|. |+...|.. . ...+ ..|++++ +|.+.+ .+.|++++++
T Consensus 195 ~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~gg~~ig~~~~~~ 271 (396)
T PRK04073 195 IQGEAGINIPPEGFLKAARELCKEENVLFIADEIQT-GLGRTGKLFACDWDNVTPDMYIL--GKALGGGVFPISCVAANR 271 (396)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcCcHHHHhhhcCCCCCEEEe--cccccCCCCcceEEEEcH
Confidence 6543 3333 8999999999999999999985 55333321 1 1112 4577664 699844 6889999887
Q ss_pred CCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.........++ ++...++...+|+.+.++++
T Consensus 272 ------~i~~~~~~~~~~~t~~~-~~~~~aaa~aaL~~~~~~~l 308 (396)
T PRK04073 272 ------DILGVFTPGSHGSTFGG-NPLACAVSIAALEVLEEEKL 308 (396)
T ss_pred ------HHHhhhcCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCH
Confidence 57776654333333343 33444444567776555555
No 277
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.33 E-value=1e-10 Score=117.27 Aligned_cols=225 Identities=14% Similarity=0.091 Sum_probs=129.1
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC--
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH-- 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG-- 192 (385)
.|.|.+++...+... .. ....| .. .++...++++++++|.+. .+.+.||++|+.+++..+..++
T Consensus 57 ~p~v~~a~~~~~~~~-~~--~~~~~--~~----~~~~~la~~l~~~~~~~~-----v~~~~gg~eA~~~al~~a~~~~~~ 122 (396)
T PRK02627 57 HPKLVEAIQEQAAKL-IH--TSNLY--YI----EPQEELAEKLVELSGMDK-----VFFCNSGAEANEAAIKLARKYGHK 122 (396)
T ss_pred CHHHHHHHHHHHhhc-cc--ccccc--CC----HHHHHHHHHHHhhcCCCE-----EEECCCcHHHHHHHHHHHHHHhcc
Confidence 478888887766432 11 11111 12 334445567888887753 3567788999999998776544
Q ss_pred -----CEEeecCCCCCccccCCccccccccccCcceEEEEe-ccccCCCC----CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 193 -----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP-YRLDESTG----LVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 193 -----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~-~~~~~~~~----~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
++|++.++.+. ++.. ..+...+....... .++. .+. ..|++++++.+.. ++++|++.++++
T Consensus 123 ~~~~~~~ii~~~~~yh-----g~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~~~i~~-~~~~vii~p~~~ 193 (396)
T PRK02627 123 KGIEKPEIITAENSFH-----GRTL--ATLSATGQPKYQEGFEPLV-EGFIYVPFNDIEALKAAITD-KTAAVMLEPIQG 193 (396)
T ss_pred cCCCCCeEEEECCCcC-----cccH--HHHHhcCCccccccCCCCC-CCceEeCCCCHHHHHHhcCC-CeEEEEEecccC
Confidence 66888776542 2210 01111111100000 0111 011 2389999998853 788998876543
Q ss_pred CC---C---CCHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCC-CCcEEEECCCccC-ccccEEEEEEeCCCCc
Q 016668 263 PR---D---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 263 ~~---~---~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~~ 332 (385)
+. . ..+++|.++|+++|++||+|++|. |+...|.... .+. ..|++ |++|.+ +|.+.|++++++
T Consensus 194 ~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~~~~G~rig~~~~~~---- 266 (396)
T PRK02627 194 EGGVNPADKEYLQALRELCDENGILLILDEVQT-GMGRTGKLFAYQHYGIEPDIM--TLAKGLGGGVPIGAVLAKE---- 266 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEechhc-CCCccCceeeehhcCCCCCEE--EEcchhhCCcccEEEEEcH----
Confidence 21 1 238999999999999999999985 6543332111 111 34665 467998 466889999887
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.........+ .+....++...+++.+...++
T Consensus 267 --~~~~~~~~~~~~~t~~-~~~~~~~aa~~~l~~~~~~~~ 303 (396)
T PRK02627 267 --KVADVFTPGDHGSTFG-GNPLACAAALAVIEIIEEEGL 303 (396)
T ss_pred --HHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhhccH
Confidence 5666665432223333 344445555556665544444
No 278
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.31 E-value=1.7e-10 Score=116.10 Aligned_cols=229 Identities=14% Similarity=0.080 Sum_probs=130.8
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+. .+..+.+ .+ ..+...+ +++.++++++.+. .++++||+.||..++..+..
T Consensus 48 ~~p~v~~a~~~~~~-~~~~~~~--~~--~~~~~~~----~~~~l~~~~~~~~-----~~~~~SGs~A~e~al~~~~~~~~ 113 (400)
T PTZ00125 48 CHPKILAALINQAQ-KLTLTSR--AF--YNDVLGL----AEKYITDLFGYDK-----VLPMNSGAEAGETALKFARKWGY 113 (400)
T ss_pred CCHHHHHHHHHHHH-hcccccc--cc--cCHHHHH----HHHHHHhCCCCCE-----EEEeCCcHHHHHHHHHHHHHHHH
Confidence 47888888877654 2322211 11 1232233 4456777787653 46788999999999986631
Q ss_pred -------CCCEEeecCCCCCccccCCccccccccccCcceEEEEec-cccCC---CCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 191 -------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDES---TGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 191 -------pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~---~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
.+++|+..+-.+ |+.... .+...+.......+ +..+. -...|++++++.++..++++|++++
T Consensus 114 ~~~~~~~~~~~vl~~~~~~-----Hg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep 186 (400)
T PTZ00125 114 EVKGIPENQAKIIFCNGNF-----SGRTIG--ACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEP 186 (400)
T ss_pred hccCCCCCCCeEEEECCCc-----CCccHH--HHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcC
Confidence 357788776322 332110 11111110000000 00000 0124899999998634688998876
Q ss_pred CCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-cCCCC--CCcEEEECCCccCcc--ccEEEEEEeC
Q 016668 260 SAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (385)
Q Consensus 260 s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p~~--gaDiv~~S~hK~l~G--prgG~I~~~~ 328 (385)
..+ +...+ +++|+++|+++|+++|+|++| .|+...|.. ..... ..|++++| |+|.| ++.|++++++
T Consensus 187 ~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~-~g~g~~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~ 263 (400)
T PTZ00125 187 IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQ-TGLGRTGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLAND 263 (400)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCccchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcH
Confidence 543 34455 999999999999999999998 454333321 11112 34777654 99854 3778898887
Q ss_pred CCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++.+.+.........++ ++...++...+++.+.++++.
T Consensus 264 ------~~~~~~~~~~~~~t~~~-~~~~~~aa~~~l~~i~~~~~~ 301 (400)
T PTZ00125 264 ------DVMLVIKPGEHGSTYGG-NPLACAVAVEALEVLKEEKLA 301 (400)
T ss_pred ------HHHhhccCCCCCCCCCc-CHHHHHHHHHHHHHHHhcCHH
Confidence 57776654332233333 333444445567666555553
No 279
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.31 E-value=2.2e-10 Score=115.81 Aligned_cols=226 Identities=16% Similarity=0.116 Sum_probs=127.2
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.+.... + ....++...+ +.++++++++.+. ...++||++||.+++....
T Consensus 57 ~~p~v~~a~~~~~~~~~~~---~--~~~~~~~~~~----l~~~l~~~~~~~~-----~~~~~sGseA~e~a~klar~~~~ 122 (403)
T PRK05093 57 CHPALVKALKEQGEKLWHI---S--NVFTNEPALR----LAKKLIDATFAER-----VFFANSGAEANEAAFKLARRYAC 122 (403)
T ss_pred CCHHHHHHHHHHHHhcCcc---c--CccCCHHHHH----HHHHHHhhCCCCE-----EEEeCchHHHHHHHHHHHHHHHh
Confidence 4788888888776532111 1 1112332223 3456777776543 4667899999999987541
Q ss_pred ----cCCCEEeecCCCCCccccCCccccccccccCcce-E-E-EEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-F-E-SMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~-~-~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
...++|+..+-.+ ||+... .++..+.. + . ..+...+-. -...|++++++.+.+ ++++|++++.
T Consensus 123 ~~~~~~~~~ii~~~~~~-----HG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aaiiiep~- 193 (403)
T PRK05093 123 DRHGPEKTEIIAFHNSF-----HGRTLF--TVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDD-HTCAVVVEPI- 193 (403)
T ss_pred hcCCCCCCeEEEEcCCc-----CCchhh--hHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcC-CeEEEEEecc-
Confidence 1235677666332 332100 11111100 0 0 000000000 012388999998854 6888988743
Q ss_pred CCC--C-----CCHHHHHHHHHHcCcEEEEeccccccccccCcccCC--CC-CCcEEEECCCccC-ccccEEEEEEeCCC
Q 016668 262 YPR--D-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (385)
Q Consensus 262 ~~~--~-----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p--~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~ 330 (385)
++. . ..+++|+++|++||+++|+|++|. |+...|..... ++ ..|+ .|++|++ +|++.|++++++
T Consensus 194 ~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi--~s~sK~l~~G~rig~vv~~~-- 268 (403)
T PRK05093 194 QGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT-GMGRTGDLFAYMHYGVTPDI--LTSAKALGGGFPIGAMLTTA-- 268 (403)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCCE--EEecccccCCcceEEEEEcH--
Confidence 331 1 238999999999999999999985 76544432111 11 2454 4678998 678899999987
Q ss_pred CchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 331 ~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.........++ ++...++...+|+.+..+++
T Consensus 269 ----~i~~~l~~~~~~~t~~~-~~~~~~aa~a~L~~~~~~~~ 305 (403)
T PRK05093 269 ----EIASHFKVGTHGSTYGG-NPLACAVAEAVFDIINTPEV 305 (403)
T ss_pred ----HHHhhcCCCCCCCCCCC-CHHHHHHHHHHHHHHhhccH
Confidence 57776654333333433 33444444556766655544
No 280
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.30 E-value=1.2e-10 Score=115.81 Aligned_cols=243 Identities=13% Similarity=0.066 Sum_probs=151.0
Q ss_pred hhccccccCCCCCcHHHHHHHhhHhhccCCCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 102 ~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~-~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
++..+..|++..+|+.|++++...+.+....|..- ...+.+.++.+ +-+.+.+.++++|+++.+ +.+.+...|||.+
T Consensus 3 ~~~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~-i~~~~~~~Lr~Ll~~P~~-y~Vlfl~GggT~~ 80 (364)
T PRK12462 3 RNQLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSS-LLAQAEADLRDLLGIPDE-YGVVFLQGGSSLQ 80 (364)
T ss_pred cccceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHH-HHHHHHHHHHHHhCCCCC-CeEEEEeccHHHH
Confidence 35678889999999999999998887755433221 11222444444 444588899999999542 3365666678889
Q ss_pred HHHHHHHhccCCCEEe-ecCCCCCccccCCccccccccccCcceEEEEecccc-CCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 181 NFEVYTAILKPHDRIM-GLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl-~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~-~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
+.++...|+++||+++ +.. .|+++..+. +.+...| .++.+..... ..+..+++++++ +.+ +.+.|.+.
T Consensus 81 ~ea~~~Nll~~g~~~~~~~~---tG~fg~r~~---~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~~--~~~-d~~~v~~t 150 (364)
T PRK12462 81 FSMIPMNFSRPGAAAPEYVT---TGYWSRKAI---GEASRVA-AMRVVWDGAASGYRTLPSLAELD--WDA-RAPFRHYV 150 (364)
T ss_pred HHHHHHHcCCCCCcEEEEEe---CCHHHHHHH---HHHHhcC-CceEecCcCCCCCCcCCCHHHhc--cCC-CCcEEEEc
Confidence 9999999999999765 333 366665442 1222334 3333321111 112356766652 111 35666554
Q ss_pred --CCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCC----
Q 016668 259 --ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV---- 331 (385)
Q Consensus 259 --~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~---- 331 (385)
.+.+|...+ ++.+.+++++++|++-..|- .|-+++..|+++++.+|+|. |.| ++++.+++.+
T Consensus 151 ~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s-----~pid~~~~dvi~agsQKnlg-P~Gltvvivs~~al~~~~ 219 (364)
T PRK12462 151 SNETVEGLQFP-----DAAGLPDSPLIADMSSDFMS-----RPFDVEAYGMVYAHAQKNLG-PAGVTVAIIRRALLERVP 219 (364)
T ss_pred cCCCCceEecC-----cccccCCCeEEEEcCchhhC-----CCCChHHccEEEeeccccCC-CCceEEEEECHHHHhhcc
Confidence 344565553 33334689999999743321 22334455999999999995 888 6777776421
Q ss_pred ----chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCc
Q 016668 332 ----LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 332 ----~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
.+.++...++... +..+|....|.++..+|+.++++
T Consensus 220 ~~~p~~ldy~~~~~~~s---~~nTPpv~~iy~l~~~l~~i~~e 259 (364)
T PRK12462 220 DTLPPMLDFRTHVEHRS---NYNTPPVFAIYVMALVLRWIRDE 259 (364)
T ss_pred ccCCchhhHHHHHhcCC---CCCCchHHHHHHHHHHHHHHHHh
Confidence 1223333333321 22378999999999999998876
No 281
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.29 E-value=2.7e-10 Score=115.08 Aligned_cols=226 Identities=18% Similarity=0.145 Sum_probs=128.4
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 189 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all----- 189 (385)
+|.|.+++...+.+-+.. +..+ .++...+ ..++++++++.+. ..+++||++||..++..+.
T Consensus 53 ~p~v~~a~~~~~~~~~~~---~~~~--~~~~~~~----la~~L~~~~~~~~-----~~f~~SGseA~e~Alk~ar~~~~~ 118 (397)
T TIGR03246 53 HPELVKALIEQADKLWHI---GNGY--TNEPVLR----LAKKLVDATFADK-----VFFCNSGAEANEAALKLARRYALD 118 (397)
T ss_pred CHHHHHHHHHHHHhcccc---cCcc--CCHHHHH----HHHHHHhhCCCCE-----EEEeCCcHHHHHHHHHHHHHHHHh
Confidence 788888887776542211 1111 2232223 3456778877643 4668899999999998651
Q ss_pred ---cCCCEEeecCCCCCccccCCccccccccccCcceEEEEec-cccCC---CCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 190 ---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDES---TGLVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 190 ---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~---~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
...++|+..+-.+ ||+.. ..++..+......++ +..+. -...|++++++.+.+ ++++|++++...
T Consensus 119 ~~~~~r~~ii~~~~~y-----HG~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epi~~ 190 (397)
T TIGR03246 119 KHGADKSEIVAFKNSF-----HGRTL--FTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISD-KTCAVIVEPIQG 190 (397)
T ss_pred cCCCCCCEEEEECCCc-----CCccH--HHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhcc-CeEEEEEecccC
Confidence 1245677665322 33211 011222210000000 00000 012489999998864 688888875432
Q ss_pred --C----CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCC-CCcEEEECCCccC-ccccEEEEEEeCCCCc
Q 016668 263 --P----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 263 --~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~~ 332 (385)
+ ....+++|+++|+++|+++|+|++| .|+...|.... .+. ..|++ ++.|.+ .|.+.|++++++
T Consensus 191 ~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lggG~pigav~~~~---- 263 (397)
T TIGR03246 191 EGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDIL--TSAKALGGGFPIGAMLTTT---- 263 (397)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hcCCccccchhhhhcCCCCCEE--EeehhhhCCcceeEEEEcH----
Confidence 2 2234899999999999999999999 67643343211 122 35766 567998 667788888887
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.......+.++ ++...++..++++.+.+++.
T Consensus 264 --~i~~~~~~~~~~~t~~~-~p~~~aaa~a~l~~~~~~~l 300 (397)
T TIGR03246 264 --EIAAHLKVGTHGTTYGG-NPLACAVAGKVLDLVNTPEL 300 (397)
T ss_pred --HHHHhccCCCcCCCCCC-CHHHHHHHHHHHHHHhhccH
Confidence 57666654333333332 33445555557766655554
No 282
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.29 E-value=7e-12 Score=122.91 Aligned_cols=190 Identities=16% Similarity=0.215 Sum_probs=58.9
Q ss_pred HHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecC---CCCCccccCCccccccccccCcceEEEEeccc
Q 016668 155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD---LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~---~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
+.+++++|++.+ +...+...|++.++.++. +|.+|++.. .+.||.+... ..+...|.. .+.++.
T Consensus 54 ~ll~~ltgAeaA-----~VvNnnaAAv~L~l~~la-~~~EvIvsRGelVeiGgsFRip-----~vm~~sGa~--lvEVGt 120 (367)
T PF03841_consen 54 ELLCELTGAEAA-----LVVNNNAAAVLLALNTLA-KGKEVIVSRGELVEIGGSFRIP-----DVMRQSGAR--LVEVGT 120 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccc-----cccccccccccccccccc-cccccccccccccccccccccc-----ccccccccc--cccccc
Confidence 357789999874 334566678877777765 566777664 2334432211 233455653 334333
Q ss_pred cCCCCCCCHHHHHHHhhhcCCcEE-EEcCCCCC-----CCCCHHHHHHHHHHcCcEEEEecccccccccc----Cc----
Q 016668 232 DESTGLVDYDMLEKTAILFRPKLI-IAGASAYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAA----SV---- 297 (385)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklI-i~~~s~~~-----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~----g~---- 297 (385)
. ..-.+++.++.+.+ ++.+| .+..|||- ...++++++++|++|++++++|.. +|.... |.
T Consensus 121 t---N~t~~~Dye~AI~e-~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dlg--sG~l~dl~~~gl~~Ep 194 (367)
T PF03841_consen 121 T---NRTHLSDYEKAITE-NTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLG--SGLLVDLSPYGLPDEP 194 (367)
T ss_dssp --------------------------------------------HHHHHHHHHT--EEEE-T--THHHHHHHTT------
T ss_pred c---cccccccccccccc-cccccccccccccccccccccccHHHHHHHHhhcCCcEEEECC--CCCCcCcccccCcccc
Confidence 2 23445666778865 56655 45556652 245799999999999999999986 443321 11
Q ss_pred -ccCCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccC-CCccCCChHHHHHHHHHHHHHhhCch
Q 016668 298 -VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 298 -~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~f-p~~qg~p~~~~iaala~Al~e~~~~~ 371 (385)
....++ |+|+++||..|-|.||+.|+|++++ ++.+++.+... ..+ -..-.++++|..+|+...+++
T Consensus 195 ~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk------~lI~~lk~~pl~Ral--rvdK~tla~L~atL~~Y~~~~ 263 (367)
T PF03841_consen 195 TVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKK------ELIEKLKKHPLGRAL--RVDKLTLAALEATLRLYLDPD 263 (367)
T ss_dssp ----CCCCT-SEEEEETTSSSSS-S-EEEEEEH------HHHHHHHHHHHTTT---B--HHHHHHHHHHHHH-----
T ss_pred HHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCH------HHHHHHhhCCCcceE--eeCHHHHHHHHHHHHHHHHhh
Confidence 112234 8999999999999999999999999 68888876532 222 256789999999999877543
No 283
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.27 E-value=1.9e-10 Score=114.82 Aligned_cols=227 Identities=19% Similarity=0.159 Sum_probs=130.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pG 192 (385)
.+|.|.+++...+.+... .+..+ .+ +++....+++.+.++.+. .+.+.||++|+.+++... ..+|
T Consensus 46 ~~p~v~~a~~~~~~~~~~---~~~~~--~~----~~~~~la~~l~~~~~~~~-----~~~~~sG~~a~~~A~~~a~~~~g 111 (377)
T PRK02936 46 CHPTVTKAVQEQLDDIWH---VSNLF--TN----SLQEEVASLLAENSAGDL-----VFFCNSGAEANEAALKLARKHTG 111 (377)
T ss_pred CCHHHHHHHHHHHHhccc---ccccc--CC----HHHHHHHHHHHhcCCCCE-----EEEeCCcHHHHHHHHHHHHHhcC
Confidence 467888887777653211 11111 12 455555567777766542 366789999999999854 2344
Q ss_pred -CEEeecCCCCCccccCCccccccccccCcceEEEEec-cccCCC---CCCCHHHHHHHhhhcCCcEEEEcCCCCC----
Q 016668 193 -DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILFRPKLIIAGASAYP---- 263 (385)
Q Consensus 193 -D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~~---~~iD~d~le~~i~~~~pklIi~~~s~~~---- 263 (385)
++|++.+..+ ||+... .+...+.......+ +..++. ...|++++++.+.. ++++|++++....
T Consensus 112 ~~~vi~~~~~~-----Hg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~-~~~~ii~e~i~~~~G~~ 183 (377)
T PRK02936 112 KSKIVTFEQSF-----HGRTFG--TMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE-EVAAVMLEVVQGEGGVI 183 (377)
T ss_pred CCeEEEECCCc-----CCCcHH--hhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC-CeEEEEEecccCCCCCc
Confidence 6788877543 222110 11111110000000 010000 02388999998854 6788888654321
Q ss_pred --CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCC-CCcEEEECCCccC-ccccEEEEEEeCCCCchhHHH
Q 016668 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELE 337 (385)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~ 337 (385)
....+++|+++|+++|+++|+|++| .|+...|.... .+. ..|++ +++|++ .|.++|++++++ ++.
T Consensus 184 ~~~~~~l~~l~~l~~~~~~~lI~DEv~-~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~ig~v~~~~------~~~ 254 (377)
T PRK02936 184 PADPAFLQEVQTLCKKFGALLIIDEVQ-TGIGRTGTLFAYEQFGLDPDIV--TVAKGLGNGIPVGAMIGKK------ELG 254 (377)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhHHHhhCCCCcEE--EEcccccCCCccEEEEEcH------HHH
Confidence 1234899999999999999999998 56654443111 111 24655 578998 556889999887 577
Q ss_pred HHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 338 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 338 ~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+.+.........+ .+....++...+++.+..+++
T Consensus 255 ~~~~~~~~~~t~~-~~~~~~aaa~a~l~~~~~~~~ 288 (377)
T PRK02936 255 TAFGPGSHGSTFG-GNPLAMAAAKEVLQVIKQPSF 288 (377)
T ss_pred hhccCCCCCCCCC-CCHHHHHHHHHHHHHHHhccH
Confidence 7665443333333 455556666667776644333
No 284
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.26 E-value=7.8e-10 Score=103.53 Aligned_cols=225 Identities=16% Similarity=0.210 Sum_probs=144.0
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCC-------CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYY-------GGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~-------~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A 180 (385)
-.--.++++.++++-+. ..||.--.|- --.+.+..+- +.+++++|.|. ++++.|. .|
T Consensus 24 QrGGiLt~eArkal~E~-----gDGYSvCD~C~~Grldei~kPpI~~F~----~dlaeFlg~D~------~R~t~GARe~ 88 (382)
T COG1103 24 QRGGILTEEARKALLEW-----GDGYSVCDFCLEGRLDEITKPPIKDFL----EDLAEFLGMDE------VRVTAGAREA 88 (382)
T ss_pred hccCcCCHHHHHHHHHh-----cCCcchhhhhccCccccccCCcHHHHH----HHHHHHhCCce------eeecccchhh
Confidence 34556789999998743 2343321111 1122233332 24889999986 4567776 69
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh------cCCcE
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL------FRPKL 254 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~------~~pkl 254 (385)
-++++.++.++||.|++... +|.+. | -.+...|..+..+|- ..--+..|+++.-.+.+++ ..|.+
T Consensus 89 KfavMhal~~~gd~vV~D~~---aHYtt-y----vAAEragl~v~eVp~-tg~Pey~i~~e~y~~viee~~~~~g~~~~l 159 (382)
T COG1103 89 KFAVMHALCKEGDWVVVDSL---AHYTT-Y----VAAERAGLNVAEVPN-TGYPEYKITPEGYAEVIEEVKDEGGDPPAL 159 (382)
T ss_pred HHHHHHHhccCCCEEEEcCc---chHHH-H----HHHHhcCCeEEecCC-CCCCceEecHHHHHHHHHHHHhccCCCceE
Confidence 99999999999999998775 44431 1 134567776655551 1111346777666555432 12566
Q ss_pred EEEcCC--CCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCcc-ccEEEEEEeCCC
Q 016668 255 IIAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDP 330 (385)
Q Consensus 255 Ii~~~s--~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~ 330 (385)
.++..+ +|+...|.++++++|+++|+.++...|+..|.. ..+--+ ++||+++|.||+++. -..|++..+.
T Consensus 160 allTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grm----pvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~e-- 233 (382)
T COG1103 160 ALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRM----PVSGKEIGADFIVGSGHKSMAASAPIGVLAMSE-- 233 (382)
T ss_pred EEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccc----cccccccCCCEEEecCccchhccCCeeEEeehh--
Confidence 666543 588888999999999999999999999987743 113233 899999999999843 2456666666
Q ss_pred CchhHHHHHHhhcc---CCC---------ccCCChHHHHHHHHHHHHHh
Q 016668 331 VLGVELESAINNAV---FPG---------LQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 331 ~~~~~~~~~i~~~~---fp~---------~qg~p~~~~iaala~Al~e~ 367 (385)
++.+.+-+.. |+- ..|.|....+|++-.-.+.+
T Consensus 234 ----E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRV 278 (382)
T COG1103 234 ----EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERV 278 (382)
T ss_pred ----HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHH
Confidence 5666543221 322 24567777777776655544
No 285
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.25 E-value=1.3e-09 Score=110.05 Aligned_cols=223 Identities=13% Similarity=0.088 Sum_probs=128.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.. +..+.+ .+ ..+...+++ +++++++|.+. .+.++||++||..++..+.
T Consensus 54 ~~p~v~~a~~~~~~~-~~~~~~---~~-~~~~~~~l~----~~l~~~~~~~~-----~~~~~SGs~A~e~ai~~a~~~~~ 119 (401)
T TIGR01885 54 CHPKIVKALTEQAQK-LTLSSR---AF-YNDVFGEFA----EYVTKLFGYDK-----VLPMNTGAEAVETAIKLARKWGY 119 (401)
T ss_pred CCHHHHHHHHHHHHh-cccccc---cc-CCHHHHHHH----HHHHhhcCCCE-----EEEeCccHHHHHHHHHHHHHHhh
Confidence 368888888776543 322221 11 233333444 46778888543 4678899999999998752
Q ss_pred -----cC-CCEEeecCCCCCccccCCccccccccccCcce-----E-----EEEeccccCCCCCCCHHHHHHHhhhc--C
Q 016668 190 -----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----F-----ESMPYRLDESTGLVDYDMLEKTAILF--R 251 (385)
Q Consensus 190 -----~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~-----~~i~~~~~~~~~~iD~d~le~~i~~~--~ 251 (385)
.+ .++|+.....| |+... ..+...+.. + ....++ ..|++++++.++.. +
T Consensus 120 ~~~~~~~~~~~i~~~~~~y-----hg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~ 186 (401)
T TIGR01885 120 KVKGIPENQAIIVSAKGNF-----HGRTL--GAISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPN 186 (401)
T ss_pred hhcCCCCCCCEEEEECCCc-----CcccH--HHHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCC
Confidence 13 45676665443 32210 011222110 0 011111 24789999988643 2
Q ss_pred CcEEEEcCCC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcccC--CCC-CCcEEEECCCccCcc--cc
Q 016668 252 PKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSLRG--PR 320 (385)
Q Consensus 252 pklIi~~~s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~-gaDiv~~S~hK~l~G--pr 320 (385)
..+|++++.. .+...+ +++|+++|+++|+++++|++| .|+...|.... ... ..|++++| |.+.| ++
T Consensus 187 ~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~-~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ 263 (401)
T TIGR01885 187 VCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQ-TGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYP 263 (401)
T ss_pred EEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchhhHHhhcCCCCCEEEee--ccccCCCCC
Confidence 3466665432 233333 899999999999999999998 56544443211 112 45777654 99854 57
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.|++++++ ++.+.+.......+.+++ +...++...+|+.+.+++..
T Consensus 264 ig~v~~~~------~i~~~~~~~~~~~t~~~~-p~~~~aa~a~L~~i~~~~l~ 309 (401)
T TIGR01885 264 VSAVLADD------DVMLTIKPGEHGSTYGGN-PLACAVAVAALEVLEEEKLA 309 (401)
T ss_pred cEEEEEcH------HHHhhccCCCCCCCCCCC-HHHHHHHHHHHHHHHhccHH
Confidence 78888876 566666543333344443 44455556677766654443
No 286
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.25 E-value=9.1e-11 Score=110.95 Aligned_cols=188 Identities=23% Similarity=0.288 Sum_probs=128.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-cCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all-~pG 192 (385)
+..+.+++|.+.- -|...|+-.+...+||+ +.+++||-+. .++.+|||.+|+.+++.-+ +||
T Consensus 34 PTdeMr~am~eA~--------vgDdVyGeD~tt~rLE~----~vA~l~GKEA-----gLFv~SGTmgNllaIm~Hc~~rg 96 (384)
T KOG1368|consen 34 PTDEMRRAMAEAS--------VGDDVYGEDPTTNRLEQ----RVAELFGKEA-----GLFVPSGTMGNLLAIMVHCHQRG 96 (384)
T ss_pred ChHHHHHHHhhcc--------cCcccccCCccHHHHHH----HHHHHhCccc-----eeeecccccccHHHHHHHhcCCC
Confidence 4667777776432 22234555566667886 6789999886 3677999999999998875 599
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcC-------CcEEEEcCCCC--C
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-------PKLIIAGASAY--P 263 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~-------pklIi~~~s~~--~ 263 (385)
.+|++-+..| . |.|-. .....+.|.. +.++. +++++.+|+++||..+...+ +|||++..+++ |
T Consensus 97 ~eii~gd~~H---I-~~~E~-gg~s~l~gv~--~~tv~-~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~G 168 (384)
T KOG1368|consen 97 SEIIVGDRAH---I-HRYEQ-GGISQLAGVH--VRTVK-NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCG 168 (384)
T ss_pred ceEEeccchh---e-eehhc-cChhhhccce--eEeee-eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccC
Confidence 9999877543 2 22210 0122355543 33432 23567999999999986432 48999877654 4
Q ss_pred -CCCCH---HHHHHHHHHcCcEEEEeccccccc-cccCcccCCCC----CCcEEEECCCccCccccEEEEEEeCC
Q 016668 264 -RDFDY---PRMRQIADAVGALLMMDMAHISGL-VAASVVADPFK----YCDVVTTTTHKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 264 -~~~dl---~~I~~ia~~~ga~livD~ah~~Gl-i~~g~~~~p~~----gaDiv~~S~hK~l~GprgG~I~~~~~ 329 (385)
...|+ +++.++|+++|+.|+.|+|....- ++.|+ |+. .+|-+..-++|.|..|-|.+|+++++
T Consensus 169 g~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV---~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~ 240 (384)
T KOG1368|consen 169 GKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV---PVKKICSAFDSVSICLSKGLGAPVGSVIVGSKD 240 (384)
T ss_pred ceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC---CHHHHHHhhhhhhhhhhccCCCCcccEEEccHH
Confidence 55565 567789999999999999864221 12222 232 56878788899999999999999995
No 287
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.24 E-value=1.5e-10 Score=114.69 Aligned_cols=233 Identities=19% Similarity=0.169 Sum_probs=148.8
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcH-HHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNE-YIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~-~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
..+.+.+++. +|....-++|..-|+. ...++|+ ..++++|.+++ +.+..|-..|...+.+|+.||
T Consensus 156 ca~~~~~~~~-----kygl~~css~~e~G~~~~hkelE~----l~A~f~g~e~a-----~vF~mGf~TNs~~~p~l~~~g 221 (519)
T KOG1357|consen 156 CAEASLKSFD-----KYGLSRCSSRHEAGTTEEHKELEE----LVARFLGVEDA-----IVFSMGFATNSMNIPSLLGKG 221 (519)
T ss_pred CChHHHHHHH-----HhcccccccchhcccHHHHHHHHH----HHHHhcCCcce-----EEEeccccccccCcceeecCC
Confidence 3566666654 3444444555555653 3445555 57899999983 557778888888899999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---------cCC--cEEEEcC--
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---------FRP--KLIIAGA-- 259 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---------~~p--klIi~~~-- 259 (385)
.-|+...++|.+-.. .+++.|+..++.. . -|+++||+.+++ ++| |++++..
T Consensus 222 sLIiSDelNHaSi~~--------GaRLSgAtiRVfk--H------Ndm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegi 285 (519)
T KOG1357|consen 222 SLIISDELNHASLIT--------GARLSGATTRVFR--H------NDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGI 285 (519)
T ss_pred cceeeccccchheec--------cccccCceEEEEe--c------CCHHHHHHHHHHHHhcCCCCcCCcchheeeeeccc
Confidence 999998887754322 3457777555443 2 366777777653 233 4555543
Q ss_pred -CCCCCCCCHHHHHHHHHHcCcEEEEeccccccccc-cCc----ccCC-CCCCcEEEECCCccCccccEEEEEEeCCCCc
Q 016668 260 -SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV----VADP-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVL 332 (385)
Q Consensus 260 -s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~----~~~p-~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~ 332 (385)
+.-+...+++++.+++|++.++|+.|+||+.|... .|. ++.+ ...+||+.+++.|++ |--||+|.+++
T Consensus 286 ysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSf-ga~GGyiagsk---- 360 (519)
T KOG1357|consen 286 YSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSF-GAAGGYIAGSK---- 360 (519)
T ss_pred eeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhc-ccccceecCcH----
Confidence 23456789999999999999999999999988763 232 1111 126789999999986 56889999988
Q ss_pred hhHHHHHHhhccCCCccCCCh-HHHHHHHHHHHHHhhCchH----HHHHHHHhccc
Q 016668 333 GVELESAINNAVFPGLQGGPH-NHTIGGLAVCLKHAQSPEF----KVYQNKSACKP 383 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~-~~~iaala~Al~e~~~~~~----~~y~~~v~~~~ 383 (385)
++.+.+....-....++.. +....-...+++-++-++. ++-.+|+.+|+
T Consensus 361 --~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns 414 (519)
T KOG1357|consen 361 --ELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENS 414 (519)
T ss_pred --HHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhh
Confidence 5666654432222222222 2223333446666654433 45555555553
No 288
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.23 E-value=1.7e-10 Score=109.15 Aligned_cols=165 Identities=23% Similarity=0.296 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCC-CCC------ccccCCcccccccccc
Q 016668 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL-PHG------GHLSHGFMTPKRRVSG 219 (385)
Q Consensus 147 ~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~-~~g------gh~s~~~~~~~~~~~~ 219 (385)
|-||+ -+++.||++.+- |.+++.|||.|+..++.++|+|||++|...- +|. |--..+ ...+.-
T Consensus 68 dtLe~----vyA~vf~aE~a~--VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~----~gSL~d 137 (416)
T COG4100 68 DTLER----VYAQVFGAEAAL--VRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEG----QGSLKD 137 (416)
T ss_pred hHHHH----HHHHHhccccce--eeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCC----cccHHH
Confidence 45555 478999999752 6788899999999999999999999886531 010 000000 012334
Q ss_pred CcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC----CCC--CCCCHHHHHHHHHHc--CcEEEEecccccc
Q 016668 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS----AYP--RDFDYPRMRQIADAV--GALLMMDMAHISG 291 (385)
Q Consensus 220 ~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s----~~~--~~~dl~~I~~ia~~~--ga~livD~ah~~G 291 (385)
.|..++.++ +. .++.+|++.+++.+++ ++|+|.+.-| .-| ...+++++.++.|+. ++++++|++++ .
T Consensus 138 fgi~Y~~v~--Lt-~~gkiD~~~v~~~i~~-~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYG-E 212 (416)
T COG4100 138 FGIKYKAVP--LT-ADGKIDIQAVKTAISD-RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYG-E 212 (416)
T ss_pred hCcceeecc--cc-cCCcccHHHHHHhcCc-cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccch-h
Confidence 455566665 43 2589999999999975 8999977433 222 234678888888886 79999999973 2
Q ss_pred ccccCcccCCCC-CCcEEEECCCccCccc---cEEEEEEeCC
Q 016668 292 LVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (385)
Q Consensus 292 li~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~ 329 (385)
++- ...|.. |+|++.+|+-|+-.|- .||+|.++.+
T Consensus 213 FvE---~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~ 251 (416)
T COG4100 213 FVE---EKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAE 251 (416)
T ss_pred hhh---ccCccccchhhhccceeeCCCCceeeccceeechHH
Confidence 231 124555 9999999999996553 4789998885
No 289
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.22 E-value=1.2e-09 Score=110.96 Aligned_cols=224 Identities=17% Similarity=0.126 Sum_probs=127.8
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--cc
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~ 190 (385)
..+|.|.+++...+.+.. .| ...++...+ .++++++++.... -.++++||++|+.+++... ..
T Consensus 64 h~~p~v~~ai~~q~~~~~--~~-----~~~~~~~~~----lae~l~~~~~~~~----~v~~~~sGseA~e~Alk~ar~~~ 128 (423)
T TIGR00713 64 HAHPRVVEAVKEALERGT--SY-----GAPTEAEIL----LAKEIISRVPSVE----MVRFVNSGTEATMSAVRLARGYT 128 (423)
T ss_pred CCCHHHHHHHHHHHHhCC--cC-----CCCCHHHHH----HHHHHHHhCCccc----EEEEeCCHHHHHHHHHHHHHHhh
Confidence 457999999887775421 11 112221222 3456667665432 1356788999999988754 23
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcce---------------EEEEeccccCCCCCCCHHHHHHHhhh--cCCc
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY---------------FESMPYRLDESTGLVDYDMLEKTAIL--FRPK 253 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~---------------~~~i~~~~~~~~~~iD~d~le~~i~~--~~pk 253 (385)
.+++|+..++.+-|+-. +. ......+.. ...+.++ ..|++++++.++. .+++
T Consensus 129 gr~~ii~~~~~yhG~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~a 197 (423)
T TIGR00713 129 GRDKIIKFEGCYHGHHD-AL----LVKAGSGAATLGLPTSPGVPEDFAKLTLVLP------YNDLEALEEVFEEYGEEIA 197 (423)
T ss_pred CCCEEEEEcCCCCCChh-hh----hccccCcccccCCCCCCCCCcccccceEEeC------CCCHHHHHHHHHHcCCcEE
Confidence 56899998875533210 00 000000000 0001111 1389999998863 3567
Q ss_pred EEEEcC-CC-CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-cCCCC-CCcEEEECCCccC-ccccEEEE
Q 016668 254 LIIAGA-SA-YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSL-RGPRGGMI 324 (385)
Q Consensus 254 lIi~~~-s~-~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p~~-gaDiv~~S~hK~l-~GprgG~I 324 (385)
+|++.+ ++ .+...+ +++|+++|+++|+++|+|++| .|+..+... ...+. ..|++ +++|.+ .|.+.|++
T Consensus 198 avi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~r~g~~~~~~~~~~~pDi~--t~sK~l~~G~pig~v 274 (423)
T TIGR00713 198 GVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVM-TGFRVALGGAQEYFGVEPDLT--TLGKIIGGGLPVGAF 274 (423)
T ss_pred EEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccc-cccccCcchhHHHhCCCcchh--hhhhhhcCCCceeee
Confidence 787752 22 333333 789999999999999999998 566432111 11122 34654 588998 56789999
Q ss_pred EEeCCCCchhHHHHHHhhc--cCC-CccCCChHHHHHHHHHHHHHhhCchH
Q 016668 325 FFKKDPVLGVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~--~fp-~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++++ ++.+.+... .+. .+.++ +....++..++|+.+.++++
T Consensus 275 ~~~~------~i~~~~~~~~~~~~~~T~~~-~~~~~aaa~a~l~~~~~~~~ 318 (423)
T TIGR00713 275 GGRR------EIMERLAPEGPVYQAGTLSG-NPLAMAAGLATLKLLDEEGV 318 (423)
T ss_pred eEHH------HHHHhhCcCCCeeeccCCCC-CHHHHHHHHHHHHHHhcccH
Confidence 9987 677777531 122 23333 44444444556776655444
No 290
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.20 E-value=3.6e-10 Score=111.74 Aligned_cols=158 Identities=19% Similarity=0.191 Sum_probs=99.4
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
++.+++++|+... -+|.+++|+. ++.. +..+++||| |++.+|.+.++.. .+...|..+ ++++.+
T Consensus 59 ~~~ia~~~~~~~~---~~I~i~~Gs~e~i~~-l~~~~~~g~-v~v~~P~y~~y~~--------~~~~~g~~~--~~v~~~ 123 (339)
T PRK06959 59 AACAARYYGAPDA---AHVLPVAGSQAAIRA-LPALLPRGR-VGIAPLAYSEYAP--------AFARHGHRV--VPLDEA 123 (339)
T ss_pred HHHHHHHhCCCCc---ccEEECcCHHHHHHH-HHHhcCCCe-EEEcCCCcHHHHH--------HHHHCCCEE--Eeeccc
Confidence 4568899999642 1577788876 6654 455688887 7778887655432 234566543 343333
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHH---HHHHcCcEEEEeccccccccccCcccCCC-CCCc
Q 016668 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQ---IADAVGALLMMDMAHISGLVAASVVADPF-KYCD 306 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~---ia~~~ga~livD~ah~~Gli~~g~~~~p~-~gaD 306 (385)
. +.++ + ..++++++.|+|| ...+.+++.+ .|++++.++|+|+++. .+...... ..+ +.-+
T Consensus 124 ~-------~~~~----~-~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~-~~~~~~s~-~~~~~~~~ 189 (339)
T PRK06959 124 A-------DTLP----A-ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFA-DTLPAASL-AAHTDRPG 189 (339)
T ss_pred c-------hhcc----c-cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCc-cCCCcccc-hhccCCCC
Confidence 1 2221 1 3567777778877 4556555554 4567899999999974 33321100 111 1222
Q ss_pred -EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCC
Q 016668 307 -VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFP 346 (385)
Q Consensus 307 -iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp 346 (385)
+++.|++|.+ +|.|.|++++++ ++.+.+.....+
T Consensus 190 vi~l~SfSK~~gl~GlRiGy~v~~~------~li~~l~~~~~~ 226 (339)
T PRK06959 190 LVVLRSVGKFFGLAGVRAGFVLAAP------ALLAALRDALGA 226 (339)
T ss_pred EEEEecChhhcCCcchheEEEecCH------HHHHHHHHhcCC
Confidence 6789999986 789999999987 677877765433
No 291
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.20 E-value=2.2e-09 Score=108.76 Aligned_cols=224 Identities=19% Similarity=0.171 Sum_probs=130.5
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 189 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all----- 189 (385)
+|.|.+++...+.+-... +..+ .++...+ ..++++++++.+. .++++||++||..++....
T Consensus 57 ~p~v~~A~~~~~~~~~~~---~~~~--~~~~~~~----la~~l~~~~~~~~-----v~~~~sGseA~e~Alk~ar~~~~~ 122 (406)
T PRK12381 57 HPALREALNEQASKFWHT---GNGY--TNEPVLR----LAKKLIDATFADR-----VFFCNSGAEANEAALKLARKYAHD 122 (406)
T ss_pred CHHHHHHHHHHHhhcccc---cCcc--CCHHHHH----HHHHHHhhCCCCe-----EEEcCCcHHHHHHHHHHHHHHHhh
Confidence 788888888776532111 1111 1222222 3456777776543 4667899999999987652
Q ss_pred ---cCCCEEeecCCCCCccccCCccccccccccCcce-----EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 190 ---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 190 ---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.++++|+..+..+ ||+.. ..+...+.. +...+-++. .-...|++++++.+.+ ++++|++++ .
T Consensus 123 ~~~~~r~~ii~~~~~y-----HG~t~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~l~~~l~~-~~aaviiEP-v 192 (406)
T PRK12381 123 RYGSHKSGIVAFKNAF-----HGRTL--FTVSAGGQPKYSQDFAPLPPDIR-HAAYNDLNSASALIDD-QTCAVIVEP-I 192 (406)
T ss_pred cCCCCCCeEEEECCCc-----CCcch--hHHhhcCCcccccCCCCCCCCee-EeCCCCHHHHHHhccC-CeeEEEEeC-C
Confidence 2457788877543 33311 011222210 000000000 0113588999998864 688888863 3
Q ss_pred CC-------CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCC-CCcEEEECCCccC-ccccEEEEEEeCCC
Q 016668 262 YP-------RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDP 330 (385)
Q Consensus 262 ~~-------~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~ 330 (385)
++ ....+++|+++|++||+++|+|++| .|+...|.... .+. ..|+ .|+.|.+ +|.+.|++++++
T Consensus 193 ~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~-tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~gG~~ig~~~~~~-- 267 (406)
T PRK12381 193 QGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TGVGRTGELYAYMHYGVTPDV--LTTAKALGGGFPIGAMLTTE-- 267 (406)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchh-hCCCCCcchhhhHhhCCCCCE--EEehhhhhCCCceEEEEEcH--
Confidence 33 1235899999999999999999998 67644443211 111 3465 4777999 677889988887
Q ss_pred CchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 331 ~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.......+.+ .++...++...+|+.+.+++.
T Consensus 268 ----~~~~~~~~~~~~~t~~-~~pl~~aaa~a~l~~l~~~~~ 304 (406)
T PRK12381 268 ----KCASVMTVGTHGTTYG-GNPLASAVAGKVLELINTPEM 304 (406)
T ss_pred ----HHHhhcCCCCCCCCCC-CCHHHHHHHHHHHHHHhhccH
Confidence 6777765543333333 344445555556666655444
No 292
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.20 E-value=2.6e-10 Score=114.17 Aligned_cols=199 Identities=14% Similarity=0.111 Sum_probs=128.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-cCCCEEeecCCCCCccccCCccccccccccC
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (385)
+.++. ++-+.+.+.++++|+.+. ++.+.+.+.|||.++.+++..++ ++||+|++. |.++..+.. +.+...
T Consensus 34 s~~F~-~i~~e~~~~L~~l~~~~~-~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~-----g~FG~r~~~--eia~~~ 104 (374)
T TIGR01365 34 SKLGK-EKLAEAIKKTREMLGVPA-DYLIGIVPASDTGAVEMALWSMLGCRGVDVLAW-----ESFGKGWVT--DVTKQL 104 (374)
T ss_pred CHHHH-HHHHHHHHHHHHHhCCCC-CcEEEEECCchHHHHHHHHHHcCCCCCCeEEEE-----CHHHHHHHH--HHHHhc
Confidence 33444 444457889999999854 23366677889999999999999 589999974 344443310 123345
Q ss_pred cc-eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEE-EEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 221 SI-YFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 221 g~-~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklI-i~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
|. .+..+..+ ....+|+++++. +..+. +.+.+++|...|++++.+.. +++++++|+.-+.|- .
T Consensus 105 g~~~v~~l~~~---~g~~~~~~~ve~-----~~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~-----~ 169 (374)
T TIGR01365 105 KLPDVRVLEAE---YGKLPDLKKVDF-----KNDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFA-----Q 169 (374)
T ss_pred CCCCcEEEcCC---CCCCCCHHHcCC-----CCCEEEecCCCchheecccccccccc--CCCcEEEEccchhcC-----C
Confidence 65 34554432 234789999873 12233 33556778888887665322 489999999755442 2
Q ss_pred cCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhh---------------------ccC-CCccCCChHH
Q 016668 299 ADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN---------------------AVF-PGLQGGPHNH 355 (385)
Q Consensus 299 ~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~---------------------~~f-p~~qg~p~~~ 355 (385)
+-.+++.|++++|.+|+|.+|.| ++++.+++ ..++++. ... ..+..+|..+
T Consensus 170 ~l~~d~iDv~~tgsQK~L~~ppGls~v~vs~~------Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~ 243 (374)
T TIGR01365 170 DLDYHKLDVVTFSWQKVLGGEGAHGMLILSPR------AVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSML 243 (374)
T ss_pred CCChhHCcEEEEechhccCCCCceEEEEECHH------HHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHH
Confidence 33344799999999999999998 67777774 2222211 001 1123357778
Q ss_pred HHHHHHHHHHHhhCc
Q 016668 356 TIGGLAVCLKHAQSP 370 (385)
Q Consensus 356 ~iaala~Al~e~~~~ 370 (385)
.+.++..+++++.++
T Consensus 244 ~l~a~~~~l~~i~~e 258 (374)
T TIGR01365 244 CVEDWLDALKWAESI 258 (374)
T ss_pred HHHHHHHHHHHHHHc
Confidence 888888888877665
No 293
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.19 E-value=3.4e-09 Score=111.82 Aligned_cols=175 Identities=19% Similarity=0.151 Sum_probs=114.1
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----C-----C------------------C--
Q 016668 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P-----H------------------D-- 193 (385)
Q Consensus 143 ~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~----p-----G------------------D-- 193 (385)
.+....+|+.+.+|+++++|.+. .||. ++++||.||+.++.+.-+ | + |
T Consensus 118 SP~~t~lE~~vi~~la~l~G~~~-~~G~--~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~ 194 (608)
T TIGR03811 118 SPATSQMEEEVGKEFATLMGYKN-GWGH--IVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEI 194 (608)
T ss_pred CchHHHHHHHHHHHHHHHhCCCC-CCeE--EeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccc
Confidence 34456899999999999999986 4754 578899999987654311 0 0 0
Q ss_pred -----------------------------EEeecCCCCCccccCCccccccccccCcceE-EEEeccccCCCCCCCHHHH
Q 016668 194 -----------------------------RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF-ESMPYRLDESTGLVDYDML 243 (385)
Q Consensus 194 -----------------------------~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~-~~i~~~~~~~~~~iD~d~l 243 (385)
+|+++. ..|.|.. +.+...|... .++.+++| +++.+|+++|
T Consensus 195 ~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~---~aHyS~~-----KAa~ilGlG~~~vv~VpvD-~~~rmd~~~L 265 (608)
T TIGR03811 195 MDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQ---TKHYSWL-----KAADIIGIGLDQVIPVPVD-SNYRMDINEL 265 (608)
T ss_pred cccccccccchhhhhhhccccccccccceEEEECC---CccHHHH-----HHHHHcCCCcccEEEeecC-CCCcCCHHHH
Confidence 233332 2344321 3455667642 22344465 4679999999
Q ss_pred HHHhhhc----CCc-EEE--EcCCCCCCCCCHHHHHHHH---HHcCc--EEEEecccccc---ccccCc-----------
Q 016668 244 EKTAILF----RPK-LII--AGASAYPRDFDYPRMRQIA---DAVGA--LLMMDMAHISG---LVAASV----------- 297 (385)
Q Consensus 244 e~~i~~~----~pk-lIi--~~~s~~~~~~dl~~I~~ia---~~~ga--~livD~ah~~G---li~~g~----------- 297 (385)
++.+++. .|- +|+ +|.+..+..-|+++|.++| +++|+ |+++|+|++.. +.....
T Consensus 266 ~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~ 345 (608)
T TIGR03811 266 EKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQE 345 (608)
T ss_pred HHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhc
Confidence 9988542 232 233 3556677888999999999 66887 69999997531 111100
Q ss_pred -------c--------------cCCCCCCcEEEECCCccCcccc-EEEEEEeCC
Q 016668 298 -------V--------------ADPFKYCDVVTTTTHKSLRGPR-GGMIFFKKD 329 (385)
Q Consensus 298 -------~--------------~~p~~gaDiv~~S~hK~l~Gpr-gG~I~~~~~ 329 (385)
+ -..++++|-++..+||++.-|- .|++++++.
T Consensus 346 ~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~ 399 (608)
T TIGR03811 346 VHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDI 399 (608)
T ss_pred ccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCH
Confidence 0 0113479999999999987775 488888876
No 294
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.09 E-value=1e-08 Score=104.83 Aligned_cols=231 Identities=16% Similarity=0.060 Sum_probs=125.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-+|.|.+++...+.. ...+..+.. .++ .+....+++++++.-..+ ..++.+||++||.+++... ...
T Consensus 60 ~~p~v~~a~~~q~~~-~~~~~~~~~---~~~----~~~~la~~L~~~~~~~~~---~v~f~~SGseA~e~AlklAr~~tg 128 (433)
T PRK08117 60 RHPKVVQAIKEQADK-LMHGPSGVI---YYE----SILKLAEELAEITPGGLD---CFFFSNSGAEAIEGALKLAKHVTK 128 (433)
T ss_pred CCHHHHHHHHHHHHh-ccCcccccc---CCH----HHHHHHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 478888888877643 322222211 122 222345567788732221 2345589999999998753 223
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc-------------ceEEEEeccccC---C-----CC-CCCHHHHHHHhhh
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDE---S-----TG-LVDYDMLEKTAIL 249 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~~~~---~-----~~-~iD~d~le~~i~~ 249 (385)
..+|+..+-. + ||+... .++..+ ..+..++++-.. . +. ..|++++++.++.
T Consensus 129 r~~ii~~~~~---y--HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 201 (433)
T PRK08117 129 RPYIISFTGC---F--HGRTLG--ALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKH 201 (433)
T ss_pred CCeEEEECCC---c--CCcCHH--HHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHh
Confidence 4567766532 2 332110 000100 011222322100 0 00 1256777777642
Q ss_pred ----cCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC
Q 016668 250 ----FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL 316 (385)
Q Consensus 250 ----~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l 316 (385)
.++.+|++.+. ..+...+ +++|+++|++||+++|+|++|. |+...|... ..++ ..|+ .|+.|.+
T Consensus 202 ~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-G~gr~G~~~~~~~~gv~pDi--~t~sK~l 278 (433)
T PRK08117 202 QVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQT-GFGRTGEWFAAQTFGVVPDI--MTIAKGI 278 (433)
T ss_pred ccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccccchhHhhcCCCCCE--eehhhhc
Confidence 23556777542 2233444 8999999999999999999996 764444311 1111 2455 5778999
Q ss_pred -ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 317 -RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 317 -~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
.|.+.|++++++ ++.+.+.........+ .++...++...+|+.+.++++
T Consensus 279 g~G~pigav~~~~------~i~~~~~~~~~~~T~~-~np~~~aaa~a~L~~l~~~~l 328 (433)
T PRK08117 279 ASGLPLSAVVASK------ELMEQWPLGSHGTTFG-GNPVACAAALATLEVIKEEKL 328 (433)
T ss_pred cCCCcceeEEEcH------HHHhhccCCCCCCCCC-cCHHHHHHHHHHHHHHHhccH
Confidence 456778888877 5666554333333333 345556666667877655544
No 295
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.07 E-value=1.2e-08 Score=103.11 Aligned_cols=229 Identities=16% Similarity=0.124 Sum_probs=123.5
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 189 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all----- 189 (385)
+|.|.+++...+.. ...++.. ++ + +.+....+++.+..+.+. .++++||++||.+++..+.
T Consensus 54 ~p~v~~a~~~q~~~-~~~~~~~--~~--~----~~~~~la~~l~~~~~~~~-----v~f~~SGseA~e~Aik~ar~~~~~ 119 (395)
T PRK03715 54 NPGMVEALAAQAEK-LINPSPA--FY--N----EPMAKLAGLLTQHSCFDK-----VFFANSGAEANEGAIKLARKWGRK 119 (395)
T ss_pred CHHHHHHHHHHHHh-ccccccc--cc--C----HHHHHHHHHHhhccCCCE-----EEEeCCcHHHHHHHHHHHHHHhhc
Confidence 57777777766542 2222211 11 1 344444555665554432 4678899999999998764
Q ss_pred -cCC-CEEeecCCCCCccccCCccccccccccCcce-EEEEeccccCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC--
Q 016668 190 -KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDES---TGLVDYDMLEKTAILFRPKLIIAGASA-- 261 (385)
Q Consensus 190 -~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~i~~~~~~~---~~~iD~d~le~~i~~~~pklIi~~~s~-- 261 (385)
++| ++|+..+..+ ||+.. ..++..+.. +.....+..+. ....|++++++.+.+ ++.+|++.+..
T Consensus 120 ~~~~r~~ii~~~~~y-----HG~t~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~aavi~Epv~~~ 191 (395)
T PRK03715 120 HKNGAYEIITFDHSF-----HGRTL--ATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD-KTVAVMLEPVQGE 191 (395)
T ss_pred cCCCCcEEEEECCCc-----CCChH--HHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC-CceEEEEeCCcCC
Confidence 123 5677766432 33311 112222221 00000000000 013588999988854 57788887532
Q ss_pred CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCcc-ccEEEEEEeCCCCch
Q 016668 262 YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLG 333 (385)
Q Consensus 262 ~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~~~~ 333 (385)
.+...+ +++|+++|+++|+++|+|++|. |+.-.|.. . .-++ ..|++++ .|.|.| ...|.++++++
T Consensus 192 gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t-G~GRtG~~~a~~~~gv~PDi~t~--gK~lg~G~p~~av~~~~~---- 264 (395)
T PRK03715 192 GGVIPATREFMQQLRALTKQHGLLLIVDEVQT-GCGRTGTLFAYELSGIEPDIMTL--GKGIGGGVPLAALLAKAE---- 264 (395)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCCCcchhhHhhcCCCCceeee--hhhhhCCcceEEEEEccc----
Confidence 223333 8999999999999999999996 65333321 1 1122 4687665 499965 34566677764
Q ss_pred hHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 334 ~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
+.. +.......++++ ++...++...+|+.+.++++.+..
T Consensus 265 --i~~-~~~~~~~~T~~g-~pl~~aaala~L~~l~~~~l~~~~ 303 (395)
T PRK03715 265 --VAV-FEAGDQGGTYNG-NPLMTAVGVAVISQLLAPGFLEGV 303 (395)
T ss_pred --ccc-ccCCCcCCCCCC-CHHHHHHHHHHHHHHHhccHHHHH
Confidence 321 111111223333 345555555677777655554433
No 296
>PLN00144 acetylornithine transaminase
Probab=99.06 E-value=8.9e-09 Score=103.57 Aligned_cols=233 Identities=18% Similarity=0.129 Sum_probs=129.3
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc---c-
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---K- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---~- 190 (385)
+|.|.+++...+.. .. +.+..+ .++ .+....+++.++.+.+. ..+..|||+|+..++.... .
T Consensus 33 ~p~v~~ai~~q~~~-~~--~~~~~~--~~~----~~~~la~~l~~~~~~~~-----v~f~~sGseA~e~AlklAr~~~~~ 98 (382)
T PLN00144 33 DPDWVKAVAEQAGT-LA--HVSNVY--HTI----PQVELAKRLVASSFADR-----VFFCNSGTEANEAAIKFARKYQRV 98 (382)
T ss_pred CHHHHHHHHHHHHh-cC--Cccccc--cCH----HHHHHHHHHHhcCCCCe-----EEEeCCcHHHHHHHHHHHHHHHhc
Confidence 68888888877653 21 111111 122 12223445666665432 3567899999999886442 1
Q ss_pred -----C------CCEEeecCCCCCccccCCccccccccccCcceEEEEec-cccCCC---CCCCHHHHHHHhhhcCCcEE
Q 016668 191 -----P------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAILFRPKLI 255 (385)
Q Consensus 191 -----p------GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~~---~~iD~d~le~~i~~~~pklI 255 (385)
+ ..+|+...-.| ||+-.. .+...+......++ +..++. ...|++.+++.+...++++|
T Consensus 99 ~~~~~~~~~~~~r~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aav 171 (382)
T PLN00144 99 RAPDKKDPAASSATEFVSFSNSF-----HGRTLG--ALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAV 171 (382)
T ss_pred cCCCCccccccccceEEEECCCc-----ccccHH--HHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEE
Confidence 1 24687766432 332100 11111110000000 000000 02378999988865567888
Q ss_pred EEcCCCCC--C--CCC--HHHHHHHHHHcCcEEEEeccccccccccCcc-cC-CCC-CCcEEEECCCccC-ccccEEEEE
Q 016668 256 IAGASAYP--R--DFD--YPRMRQIADAVGALLMMDMAHISGLVAASVV-AD-PFK-YCDVVTTTTHKSL-RGPRGGMIF 325 (385)
Q Consensus 256 i~~~s~~~--~--~~d--l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~-p~~-gaDiv~~S~hK~l-~GprgG~I~ 325 (385)
++.+..++ . ... +++|+++|+++|+++|.|++| .|+...|.. +. ... ..| +.|+.|.| +|.+.|+++
T Consensus 172 i~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~-tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~G~pig~v~ 248 (382)
T PLN00144 172 FVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQ-CGLGRTGYLWAHEAYGVEPD--IMTLAKPLAGGLPIGAVL 248 (382)
T ss_pred EEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCccchHhhhhhcCCCCC--EEEecccccCCcceEEEE
Confidence 88755432 1 123 889999999999999999998 465444432 11 112 346 44557998 467889999
Q ss_pred EeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
+++ ++.+.+.........+ .++...++...+++.+.++++.+..++
T Consensus 249 ~~~------~~~~~~~~~~~~~T~~-~~pl~~aaa~a~l~~i~~~~~~~~~~~ 294 (382)
T PLN00144 249 VTE------KVASAINPGDHGSTFA-GGPLVCNAALAVLDKISKPGFLASVAK 294 (382)
T ss_pred EcH------HHHhccCCCCCCCCCC-CCHHHHHHHHHHHHHHhhchHHHHHHH
Confidence 987 5766665433333333 334445555667777766666544443
No 297
>PLN02624 ornithine-delta-aminotransferase
Probab=99.06 E-value=2.3e-08 Score=103.40 Aligned_cols=227 Identities=17% Similarity=0.141 Sum_probs=124.5
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~---- 190 (385)
+|.|.+++...+.. +..+.+ .+. ++...+ ..++++++++.+. .++.+||++|+..++.....
T Consensus 93 ~p~v~~ai~~ql~~-~~~~~~--~~~--~~~~~~----la~~L~~~~~~~~-----~~f~~SGseA~e~AlklAr~~~~~ 158 (474)
T PLN02624 93 HPKIIKALTEQAEK-LTLSSR--AFY--NDKFPE----FAEYLTSMFGYDM-----VLPMNTGAEGVETAIKLARKWGYE 158 (474)
T ss_pred CHHHHHHHHHHHHh-cCCccc--ccC--CHHHHH----HHHHHHhhcCCCe-----EEEeCChHHHHHHHHHHHHHHHHh
Confidence 89999999888754 332221 222 222222 3456778887653 35678999999999864321
Q ss_pred ----C-CC-EEeecCCCCCccccCCccccccccccCcceEEEEec-cccCCC---CCCCHHHHHHHhhh--cCCcEEEEc
Q 016668 191 ----P-HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAIL--FRPKLIIAG 258 (385)
Q Consensus 191 ----p-GD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~~---~~iD~d~le~~i~~--~~pklIi~~ 258 (385)
+ |. +|+... +++ ||.... .++..+.......+ +..+.. ...|++.+++.++. .+.++|+++
T Consensus 159 ~~g~~~~~~~ii~~~---~~y--HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiE 231 (474)
T PLN02624 159 KKGIPKNEAIIVSCC---GCF--HGRTLA--AISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFE 231 (474)
T ss_pred hcCCCCCCcEEEEEC---CCc--CCCCHH--HhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEEC
Confidence 2 33 355443 233 443110 11111110000000 000000 02378899988854 235678887
Q ss_pred CCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCc-ccCC-CC-CCcEEEECCCccCcc--ccEEEEEEe
Q 016668 259 ASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VADP-FK-YCDVVTTTTHKSLRG--PRGGMIFFK 327 (385)
Q Consensus 259 ~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p-~~-gaDiv~~S~hK~l~G--prgG~I~~~ 327 (385)
+..+ +...+ +++|+++|++||+++|+|++|. |+...|. +... .+ ..|++++ .|.+.| ++.|+++.+
T Consensus 232 pv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~t-G~GrtG~~~a~~~~~i~pDiv~l--sK~lggG~~pigav~~~ 308 (474)
T PLN02624 232 PIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQT-GLARTGKMLACDWEEVRPDVVIL--GKALGGGVIPVSAVLAD 308 (474)
T ss_pred CccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CcCcCcchhhHHhcCCCCCEEEe--cccccCCCCcceeeeec
Confidence 6543 33344 9999999999999999999995 6543342 1111 11 4577775 599854 577888887
Q ss_pred CCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+ ++.+.+.........++ ++...++...+|+.+.+++.
T Consensus 309 ~------~i~~~~~~~~~~~T~~g-~pl~~aaa~aaLe~l~~~~l 346 (474)
T PLN02624 309 K------DVMLCIKPGEHGSTFGG-NPLASAVAMAALQVVQDEKL 346 (474)
T ss_pred H------HHHhHhccCCcCCCCCC-CHHHHHHHHHHHHHHHhchH
Confidence 6 45555543322223333 33445555556766655443
No 298
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.05 E-value=1.2e-08 Score=103.95 Aligned_cols=230 Identities=17% Similarity=0.134 Sum_probs=126.0
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCCcceeecCCcHHHHHHHHHHhcc-
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSGSPANFEVYTAILK- 190 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lf-g~~~~~~~~~V~~~sGs~A~~~a~~all~- 190 (385)
..+|.|.+++...+.+.. . ++...+ .+...++++.+++ +.+. ...+.||++|+..++.....
T Consensus 66 h~~p~i~~a~~~~~~~~~--~-----~~~~~~----~~~~la~~L~~~~~~~~~-----v~~~~sGseA~e~Aik~a~~~ 129 (426)
T PRK00062 66 HAHPEVVEAVIEAAEKGL--S-----FGAPTE----LEVELAELVIELVPSIEM-----VRMVNSGTEATMSAIRLARGY 129 (426)
T ss_pred CCCHHHHHHHHHHHHhCC--c-----CCCCCH----HHHHHHHHHHHhCCCCCE-----EEEecCHHHHHHHHHHHHHHH
Confidence 457888888887775421 1 111122 2222445666666 3222 35678999999999987543
Q ss_pred -CCCEEeecCCCCCccccCCcccc--cccc----ccCcceEEEE---eccccCCCCCCCHHHHHHHhhh--cCCcEEEEc
Q 016668 191 -PHDRIMGLDLPHGGHLSHGFMTP--KRRV----SGTSIYFESM---PYRLDESTGLVDYDMLEKTAIL--FRPKLIIAG 258 (385)
Q Consensus 191 -pGD~Vl~~~~~~ggh~s~~~~~~--~~~~----~~~g~~~~~i---~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~ 258 (385)
.+++|+..+..+-|+.. +.... .... ...+.....+ .+.. ...|++++++.++. .+..+|+++
T Consensus 130 ~g~~~ii~~~~~yHG~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~l~~~i~~~~~~~aaiivE 204 (426)
T PRK00062 130 TGRDKIIKFEGCYHGHAD-SLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA----PYNDLEAVEELFEEYGDEIAAVIVE 204 (426)
T ss_pred hCCCeEEEEcCccCCchh-hhhhccCccccccCCCCCCCCCcccccceEEc----CCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 36789888765533310 00000 0000 0000000000 0001 12488999988753 245677776
Q ss_pred CC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-cCCCC-CCcEEEECCCccC-ccccEEEEEEeCC
Q 016668 259 AS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKD 329 (385)
Q Consensus 259 ~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~ 329 (385)
+. ..+...+ +++|+++|++||+++|+|++|. |+..++.. ...++ ..|+ .+++|.| .|++.|++++++
T Consensus 205 pv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-G~r~g~~~~~~~~~~~pDi--~~~gK~l~~G~p~ga~~~~~- 280 (426)
T PRK00062 205 PVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT-GFRVALGGAQGYYGVTPDL--TTLGKIIGGGLPVGAFGGRR- 280 (426)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh-ccccCCccHHHHhCCCcch--HhhhhHhhCCCcceeeeEHH-
Confidence 32 2344444 8999999999999999999994 66332211 11112 2465 4667998 456677788876
Q ss_pred CCchhHHHHHHhh--ccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 330 PVLGVELESAINN--AVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 330 ~~~~~~~~~~i~~--~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.. ..+.+..-+.+....++...+|+.+.++++
T Consensus 281 -----~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~ 320 (426)
T PRK00062 281 -----EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGF 320 (426)
T ss_pred -----HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchH
Confidence 67776642 122222112344445555567776655443
No 299
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.03 E-value=5.9e-09 Score=99.97 Aligned_cols=198 Identities=17% Similarity=0.162 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHH-HHHHHh--ccCCCEEeecCCCCCccccCCccccccccccCcceEE
Q 016668 149 LETLCQKRALAAFNLDENKWGVNVQPLSGSPANF-EVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (385)
Q Consensus 149 le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~-~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (385)
+-+..-++++.+.|+... +|..+.+|..|. -++.+. ..+|++|++.+- +..++ ..+.....+...+..
T Consensus 77 lp~~lgdklApLiGA~~~----Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~--~~fpT-dly~a~g~~~~~~~~-- 147 (407)
T COG3844 77 LPERLGDKLAPLIGARAG----EVVVTDTTSINLFKVLAAALRPQEGRRVIVSEG--DNFPT-DLYIAEGLADLLGIG-- 147 (407)
T ss_pred chhHHHHHhhhhhcCCCC----ceEEeCCcchHHHHHHHHHhccCCCceEEeecC--CCCCc-chhhhcchhhhhccc--
Confidence 334456789999999885 455566665443 344444 456999998762 12222 222111122333321
Q ss_pred EEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC
Q 016668 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK 303 (385)
Q Consensus 226 ~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~ 303 (385)
|++ .+.++++++++.+.+ ...+|++...+| +...|+.+|.++|+++|+++..|-+|++|.+ |..+.
T Consensus 148 ---~~~---~~~~~P~~~~~~~~d-d~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav-----p~~Lh 215 (407)
T COG3844 148 ---YDL---EGVIAPRALEEAITD-DVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV-----PVDLH 215 (407)
T ss_pred ---ccc---eeeeChHHHHHhhcc-ceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc-----ceeec
Confidence 222 356788899998865 677787776554 6778999999999999999999999998854 33333
Q ss_pred --CCcEEEECCCccCc-cccE-EEEEEeCCC--C---chhH---------HHHHHh--hccCCCccCCChHHHHHHHHHH
Q 016668 304 --YCDVVTTTTHKSLR-GPRG-GMIFFKKDP--V---LGVE---------LESAIN--NAVFPGLQGGPHNHTIGGLAVC 363 (385)
Q Consensus 304 --gaDiv~~S~hK~l~-Gprg-G~I~~~~~~--~---~~~~---------~~~~i~--~~~fp~~qg~p~~~~iaala~A 363 (385)
++|+-+.++||.|. ||-+ ++++..++- + .+.. ..+... ....-..+|++..-.++++..+
T Consensus 216 ~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~a 295 (407)
T COG3844 216 AAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGA 295 (407)
T ss_pred ccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhh
Confidence 89999999999995 4543 667766541 0 0000 111000 1111224577778888888877
Q ss_pred HHHh
Q 016668 364 LKHA 367 (385)
Q Consensus 364 l~e~ 367 (385)
|..-
T Consensus 296 LDif 299 (407)
T COG3844 296 LDIF 299 (407)
T ss_pred hhhh
Confidence 7643
No 300
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.03 E-value=2.8e-08 Score=99.53 Aligned_cols=226 Identities=19% Similarity=0.141 Sum_probs=137.7
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
+|.|.+|+...+.+-.+-|-|. ++|-.+.+.+.+++..-+. + -+++|||+|++.+++.. .-..
T Consensus 71 ~p~V~~Av~~~l~~G~~fg~Pt-----------e~Ei~~Aell~~~~p~~e~---v-rfvnSGTEAtmsAiRlARa~TgR 135 (432)
T COG0001 71 HPAVVEAVQEQLERGLSFGAPT-----------ELEVELAELLIERVPSIEK---V-RFVNSGTEATMSAIRLARAYTGR 135 (432)
T ss_pred CHHHHHHHHHHHHhcCCCCCCC-----------HHHHHHHHHHHHhcCcccE---E-EEecchhHHHHHHHHHHHHhhCC
Confidence 5889999998887655444443 4555567889999987431 2 34678999999888654 3466
Q ss_pred CEEeecCCCCCccccCCccccc------cccccCcceE----EEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPK------RRVSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGAS 260 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~------~~~~~~g~~~----~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s 260 (385)
|+|+..+-.|-||.....+... ......|..- ..+.++ ..|++.++++++.. +...||+.+.
T Consensus 136 ~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~------yND~~al~~~~~~~g~~IAaVIvEPv 209 (432)
T COG0001 136 DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP------YNDLEALEEAFEEYGDDIAAVIVEPV 209 (432)
T ss_pred CeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec------CCCHHHHHHHHHHcCCcEEEEEeccc
Confidence 8898887555444221111000 0000111100 111111 35899999999775 3456777643
Q ss_pred --CCCC----CCCHHHHHHHHHHcCcEEEEecccccccccc-CcccCCCC-CCcEEEECCCccC-ccccEEEEEEeCCCC
Q 016668 261 --AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (385)
Q Consensus 261 --~~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~~~~p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~ 331 (385)
+.+. ..-+++|+++|+++|++||.|+.++ |+... +..+.-+. ..|+.| +-|.+ .|...|.+.+++
T Consensus 210 ~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViT-GFR~~~gGaq~~~gi~PDltt--lGKiIGGGlP~ga~gGr~--- 283 (432)
T COG0001 210 AGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVIT-GFRVALGGAQGYYGVEPDLTT--LGKIIGGGLPIGAFGGRA--- 283 (432)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchh-hcccCCcccccccCcCcchhh--hhhhhcCCcceeeeccHH---
Confidence 3333 3348999999999999999999974 44332 32232232 456654 45988 456778888887
Q ss_pred chhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHhhCc
Q 016668 332 LGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 332 ~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
++.+.+... +|..-.-+-++..++|-.++++++.++
T Consensus 284 ---eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~ 321 (432)
T COG0001 284 ---EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTE 321 (432)
T ss_pred ---HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhc
Confidence 677766433 232222234556777777789888873
No 301
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.01 E-value=3.7e-08 Score=98.54 Aligned_cols=185 Identities=15% Similarity=0.113 Sum_probs=106.2
Q ss_pred eeecCCcHHHHHHHHHHh--ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc--cc--CCCCCCCHHHHH
Q 016668 171 NVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR--LD--ESTGLVDYDMLE 244 (385)
Q Consensus 171 ~V~~~sGs~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~--~~--~~~~~iD~d~le 244 (385)
.+++.||++||..++... ..++++|++.+..+ |++... .+...+......++. +. ......|++.++
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~y-----Hg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~ 159 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKATGKQEIITFQNSF-----HGRTFG--SMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVK 159 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCc-----CcccHH--HHhccCCcccCCCCCCCCCCeEEeCCCCHHHHH
Confidence 356789999999888765 34577888876543 221100 111111100000000 00 000135899999
Q ss_pred HHhhhcCCcEEEEcCCCC--CCCC----CHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCC-CCcEEEECCCcc
Q 016668 245 KTAILFRPKLIIAGASAY--PRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKS 315 (385)
Q Consensus 245 ~~i~~~~pklIi~~~s~~--~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~-gaDiv~~S~hK~ 315 (385)
+.+.+ +..+|++.+..+ +... .+++|.++|+++|+++++|++| .|+...|.... -.. ..|++ |++|.
T Consensus 160 ~~l~~-~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~-~g~g~~g~~~~~~~~~~~pdi~--t~sK~ 235 (375)
T PRK04260 160 ALVNK-NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQ-TGMGRTGKLYAFEHYGIEPDIF--TLAKG 235 (375)
T ss_pred HhcCC-CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcccchhhhHhhCCCCCEE--Eeccc
Confidence 88753 567787764432 2222 2899999999999999999998 46644442211 111 34655 68899
Q ss_pred Cc-cccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 316 LR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 316 l~-GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
|. |.+.|++++++ ++.+.+.........++ +....++...+++.+..+++.
T Consensus 236 l~~G~~ig~~~~~~------~~~~~~~~~~~~~t~~~-~~~~~~aa~a~l~~~~~~~~~ 287 (375)
T PRK04260 236 LANGVPVGAMLAKS------SLGGAFGYGSHGSTFGG-NKLSMAAASATLDIMLTAGFL 287 (375)
T ss_pred ccCCcceEEEEEcH------HHHhhcCCCCCCCCCCc-CHHHHHHHHHHHHHHHhhHHH
Confidence 95 66889999987 56666654323333332 333455555567666544443
No 302
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.01 E-value=1.9e-08 Score=99.06 Aligned_cols=202 Identities=16% Similarity=0.115 Sum_probs=129.0
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccc
Q 016668 140 YGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (385)
Q Consensus 140 ~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (385)
|.|.+ .++++.++-+.+.-|-. .=++.-.|.+.++|.||.++...|.+|||..|++.|-|+|.-.+. .-
T Consensus 120 y~Gl~---~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl-------~~ 189 (471)
T KOG0256|consen 120 YHGLP---SFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDL-------RW 189 (471)
T ss_pred ccCch---HHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccc-------ee
Confidence 34554 45554444454444432 112323555666678999999999999999999999887753221 11
Q ss_pred cCcceEEEEeccccCCC-CCCCHHHHHHHhhh-----cCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEecc
Q 016668 219 GTSIYFESMPYRLDEST-GLVDYDMLEKTAIL-----FRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 219 ~~g~~~~~i~~~~~~~~-~~iD~d~le~~i~~-----~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~a 287 (385)
..|. +.+|+.++..+ ..|+.+++|.+.++ .+.|-|++..|+|| ...+ +..+..+|.++++-+|+|+.
T Consensus 190 rTgv--eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEI 267 (471)
T KOG0256|consen 190 RTGV--EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEI 267 (471)
T ss_pred ccCc--eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehh
Confidence 3454 56666565554 48999999988743 24566666566665 3333 66777889999999999999
Q ss_pred ccccccccCc-ccCCCC-------CCc-E-EEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHH
Q 016668 288 HISGLVAASV-VADPFK-------YCD-V-VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNH 355 (385)
Q Consensus 288 h~~Gli~~g~-~~~p~~-------gaD-i-v~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~ 355 (385)
+ +|-+++.. +.+.++ ..| + ++-|++|-| +|.|-|.|++.++ ++.....+....+..++-.-+
T Consensus 268 y-a~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-----~VvsaA~kmssf~~vSs~tQ~ 341 (471)
T KOG0256|consen 268 Y-AGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-----DVVSAATKMSSFGLVSSQTQY 341 (471)
T ss_pred h-cccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-----HHHHHHHHHhhccCCcHHHHH
Confidence 6 56565432 222221 123 2 677999986 7889999999887 777766655555544333334
Q ss_pred HHHH
Q 016668 356 TIGG 359 (385)
Q Consensus 356 ~iaa 359 (385)
.+++
T Consensus 342 ~la~ 345 (471)
T KOG0256|consen 342 LLAS 345 (471)
T ss_pred HHHH
Confidence 4443
No 303
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.99 E-value=2.3e-08 Score=99.21 Aligned_cols=231 Identities=19% Similarity=0.151 Sum_probs=128.9
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg-~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
+|.+.+++.+....-+- .+.-|+ ++ ..++ ..+++.++.+ .+. .++++||++||.+++...-+
T Consensus 60 hP~iv~al~~Q~~kl~h---~sn~~~--~~---~~~~-la~~L~~~s~~~d~-----vff~NSGaEA~EaAiKlARk~~~ 125 (404)
T COG4992 60 HPALVEALKEQAEKLWH---VSNLFY--NE---PQAE-LAEKLVELSPFADR-----VFFCNSGAEANEAALKLARKYTG 125 (404)
T ss_pred CHHHHHHHHHHHHHhhh---cccccC--Ch---HHHH-HHHHHHhhCccccE-----EEEcCCcHHHHHHHHHHHHHHcC
Confidence 78888888876544331 111122 22 2333 3456777876 333 45678999999999976522
Q ss_pred -C-CCEEeecCCCCCccccCCccccccccccCcce-EEEEeccccCCC---CCCCHHHHHHHhhhcCCcEEEEcCCC--C
Q 016668 191 -P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (385)
Q Consensus 191 -p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~i~~~~~~~~---~~iD~d~le~~i~~~~pklIi~~~s~--~ 262 (385)
| .-+|+...-.+ ||.-. ..++..+.. +..-..++-+.- -.-|.+++++++++ ++..|++.+.- .
T Consensus 126 ~~~k~~Iia~~nsF-----HGRT~--galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~-~taAvivEPIQGEg 197 (404)
T COG4992 126 DPEKSKIIAFENSF-----HGRTL--GALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDE-DTAAVIVEPIQGEG 197 (404)
T ss_pred CCCCcEEEEEcCCc-----CCccc--eeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhcc-CeEEEEEecccCCC
Confidence 2 23677665333 32210 122333321 110001111110 13589999999977 78888886431 1
Q ss_pred C----CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc-C-CCC-CCcEEEECCCccCcc-ccEEEEEEeCCCCchh
Q 016668 263 P----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGV 334 (385)
Q Consensus 263 ~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~-p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~~~~~ 334 (385)
+ ...-+++++++|++||++||.|+.| .|+--+|.+. . -.. ..||++.. |.|.| ...|.++.++
T Consensus 198 GV~~~~~~fl~~lr~lCd~~g~LLI~DEVQ-tG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG~PigA~la~~------ 268 (404)
T COG4992 198 GVIPAPPEFLKALRELCDEHGALLILDEVQ-TGLGRTGKLFAYEHYGVEPDILTLA--KALGGGFPIGAMLATE------ 268 (404)
T ss_pred CCCCCCHHHHHHHHHHHHHhCeEEEEeccc-cCCCccchHHHHHHhCCCCCEEEee--ccccCCccceeeEEch------
Confidence 2 2223899999999999999999999 5664444321 0 011 34777655 99954 3445555554
Q ss_pred HHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 335 ~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
++.+.+....--.+.| -++...|+-.++++.+.++++.+-++
T Consensus 269 ~~~~~~~~G~HgSTfG-GNpLacAv~~a~l~~l~~e~ll~~v~ 310 (404)
T COG4992 269 EIASAFTPGDHGSTFG-GNPLACAVALAVLEVLLEEGLLENVR 310 (404)
T ss_pred hhhhcCCCCcccCCCC-cCHHHHHHHHHHHHHHcchhHHHHHH
Confidence 4555443332222333 33455555566888888888754433
No 304
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.98 E-value=8.7e-09 Score=113.76 Aligned_cols=189 Identities=13% Similarity=0.136 Sum_probs=116.5
Q ss_pred CCCCcHHHHHHHhhHhhccCCC--CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecC-CcHHHHHHHHHH
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSE--GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTA 187 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~--g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~-sGs~A~~~a~~a 187 (385)
+.++|+.|++++.+... .|.. .|...- ..| ..+.|.+ .+..++++.|++.+ ++..+ ++|.+..+++++
T Consensus 114 ~~~~P~~v~~~i~~~~~-~~TaytPYqaEi-sQG--~lqal~~-~Qt~ia~LtG~~~a----naSL~d~aTAaaea~~~a 184 (993)
T PLN02414 114 NTHVPPVILRNILENPG-WYTQYTPYQAEI-AQG--RLESLLN-YQTMITDLTGLPMS----NASLLDEGTAAAEAMAMC 184 (993)
T ss_pred CccCCHHHHHHHHhChH-HHhhcCCCchHH-HHH--HHHHHHH-HHHHHHHHhCCChh----hEeecCChHHHHHHHHHH
Confidence 44578888777764432 1221 122110 012 2233443 67889999999975 44444 556677777777
Q ss_pred h-ccCC--CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC-CCCC
Q 016668 188 I-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-SAYP 263 (385)
Q Consensus 188 l-l~pG--D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~-s~~~ 263 (385)
+ +++| |+|++.+.+|+++..- + .......|..++.++ ++. .| ...+ ..-.+++.. +.+|
T Consensus 185 ~~~~~g~~~~VlVs~~~hP~~~~v-~---~t~a~~~GieV~~v~--~~~----~~------~~~~-~v~~vlvq~P~~~G 247 (993)
T PLN02414 185 NNILKGKKKKFLIASNCHPQTIDV-C---QTRADGLGLEVVVAD--EKD----FD------YSSG-DVCGVLVQYPATDG 247 (993)
T ss_pred HhcccCCCCEEEEcCccCHhHHHH-H---HHhhhhcCCEEEEec--chh----hc------cccC-ceEEEEEecCCCCe
Confidence 7 6655 7899998776554321 0 012234566555544 221 11 0111 122333444 4578
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccC-----ccccEEEEEEeCC
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-----RGPRGGMIFFKKD 329 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l-----~GprgG~I~~~~~ 329 (385)
...|+++|+++||++|+++++ +++..++.. ...|-+ ||||++++.|||+ +||+.|+++++++
T Consensus 248 ~v~dv~~I~~~ah~~GaL~iV-aad~lal~~---l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~ 315 (993)
T PLN02414 248 EVLDYAEFVKNAHANGVKVVM-ATDLLALTM---LKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQE 315 (993)
T ss_pred EEcCHHHHHHHHHHcCCEEEE-EECHHHhcC---CCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHH
Confidence 888999999999999999999 777666542 222334 9999999999997 7788899999885
No 305
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.98 E-value=4.9e-08 Score=97.62 Aligned_cols=228 Identities=18% Similarity=0.156 Sum_probs=129.3
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCC-
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH- 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pG- 192 (385)
+|.|.+++...+.+-.. .+..+ .++...+ ..++++++++.+. .+..+|||+|+.+++... ..+|
T Consensus 42 ~p~v~~ai~~ql~~~~~---~~~~~--~~~~~~~----la~~l~~~~~~~~-----v~~~~SGseA~e~Alklar~~~gr 107 (364)
T PRK04013 42 HPEWVEEMSEQLEKLVV---AGPMF--EHEEKEE----MLEELSKWVNYEY-----VYMGNSGTEAVEAALKFARLYTGR 107 (364)
T ss_pred CHHHHHHHHHHHHhcCC---ccCCc--CCHHHHH----HHHHHHhhcCCCE-----EEEeCchHHHHHHHHHHHHHHhCC
Confidence 67888888777654221 11112 1232222 3456777777654 366789999999998766 3455
Q ss_pred CEEeecCCCCCccccCCccccccccccCcce-----EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--C-C
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P-R 264 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~-~ 264 (385)
++|++.+-.+-|.-. + .+...+.. +.....++... ...|.+.+++.+.. +++.|++.+... + .
T Consensus 108 ~~Ii~~~~syHG~t~-~------~ls~~~~~~~~~~~~p~~~~~~~~-~~~d~~~l~~~i~~-~~aAvivEpi~g~gG~~ 178 (364)
T PRK04013 108 KEIIAMTNAFHGRTM-G------ALSATWKPKYREDFEPLVPGFKHI-PFNDVEAAKEAITK-ETAAVIFEPIQGEGGIV 178 (364)
T ss_pred CEEEEECCccccCch-h------hccCCCCcccccCCCCCCCCcEEe-cCCCHHHHHHHhcC-CcEEEEEcCCcCCCCCc
Confidence 899888754322210 0 11111100 01000001000 12378889888854 678888865321 1 2
Q ss_pred CCC---HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEEEEeCCCCchhHHH
Q 016668 265 DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 337 (385)
Q Consensus 265 ~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~~~~~~~~ 337 (385)
..| +++++++|+++|+++|.|+.+. |+ -.|... .-+. ..|++++ .|.+. |-..+.++.+.+ +.
T Consensus 179 ~~~~~yl~~lr~lc~~~gillI~DEv~t-G~-RtG~~~a~~~~gv~PDiv~~--gK~lggG~P~~a~~~~~~------~~ 248 (364)
T PRK04013 179 PAKEEFVKTLRDLTEDVGALLIADEVQS-GL-RTGKFLAIEHYKVEPDIVTM--GKGIGNGVPVSLTLTNFD------VE 248 (364)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhh-cC-CCCchhHHHhcCCCCCEEEe--cccccCCceeEEEEeccc------cc
Confidence 344 8999999999999999999984 66 333321 1123 5688877 59984 434455666653 31
Q ss_pred HHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHh
Q 016668 338 SAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSA 380 (385)
Q Consensus 338 ~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~ 380 (385)
......+++ .++-..++....++.+.++++.+.+++++
T Consensus 249 ----~~~~~~T~~-gnp~~~aaa~a~l~~i~~~~l~~~~~~~l 286 (364)
T PRK04013 249 ----RGKHGSTFG-GNPLACKAVAVTLRILRRERLVEKAGEKF 286 (364)
T ss_pred ----CCCcCCCCC-cCHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 112222333 34455555566788888888766666553
No 306
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.97 E-value=4.8e-08 Score=99.15 Aligned_cols=231 Identities=16% Similarity=0.103 Sum_probs=123.0
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 189 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all----- 189 (385)
+|.|.+++...+.+- . +.+..+ .++ ......+++.+++.... ...+.+|||+|+..++....
T Consensus 58 ~p~v~~ai~~q~~~~-~--~~~~~~--~~~----~~~~la~~L~~~~~~~~----~v~f~~sGseA~e~AlklAr~~~~~ 124 (408)
T PRK04612 58 DPDLVAALTEQAGKL-W--HTSNVF--YSA----PPLKLAEELVTASRFAE----KVFLCNSGTEANEAAIKLVRKWASS 124 (408)
T ss_pred CHHHHHHHHHHHHhc-c--cccccc--CCH----HHHHHHHHHHhhCCCCC----EEEEcCchHHHHHHHHHHHHHHHHh
Confidence 677777777666432 1 111111 122 11223445666654222 24567899999999886442
Q ss_pred -c--C-CCEEeecCCCCCccccCCccccccccccCcceEEEEecc-ccCC---CCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 190 -K--P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDES---TGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 190 -~--p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~-~~~~---~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
+ + ..+|+...-.| ||.... .++..+.......+. +.+. -...|++.+++.+...++.+|++.+..
T Consensus 125 ~g~~~~r~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~~ 197 (408)
T PRK04612 125 QGRPADKRVIVTFRGSF-----HGRTLA--AVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEPIQ 197 (408)
T ss_pred hCCCCCCcEEEEECCCc-----CCccHH--HHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECCcc
Confidence 1 1 24677765332 443110 111111100000000 0000 012478999988854455667765432
Q ss_pred -CC-C-CC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccC-ccccEEEEEEeCCCCch
Q 016668 262 -YP-R-DF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 262 -~~-~-~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~ 333 (385)
.+ . .. -+++|+++|+++|+++|+|++|. |+...|....... +...-+.++.|.+ +|.+.|++++++
T Consensus 198 ~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-g~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~piga~~~~~----- 271 (408)
T PRK04612 198 GEGGVMPAAPGFLARVRALCDQHDALLVLDEIQC-GMGRTGTLFAHWQEQVTPDIVTLAKALGGGFPIGAMLAGP----- 271 (408)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCCchhhhhhcCCCCCEEEEcchhcCCCceEEEEECH-----
Confidence 11 1 11 38999999999999999999984 5544442111111 2333445667998 456778888776
Q ss_pred hHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 334 ~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++.+.+.......+.++ ++...++...+|+.+.+++..
T Consensus 272 -~~~~~~~~~~~~~t~~~-~p~~~aaa~a~L~~~~~~~l~ 309 (408)
T PRK04612 272 -KVAETMQFGAHGTTFGG-NPLAAAVARVALRKLASPQIA 309 (408)
T ss_pred -HHHhhhcCCCcCCCCCC-CHHHHHHHHHHHHHHHhccHH
Confidence 56666654433344443 455666666678777666553
No 307
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.94 E-value=1.8e-08 Score=111.38 Aligned_cols=152 Identities=16% Similarity=0.110 Sum_probs=102.1
Q ss_pred HHHHHHHHHcCCCCCCCcceeecC-CcHHHHHHHHHHh-ccCC--CEEeecCCCCCccccCCccccccccccCcceEEEE
Q 016668 152 LCQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LKPH--DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 227 (385)
Q Consensus 152 ~~~~~la~lfg~~~~~~~~~V~~~-sGs~A~~~a~~al-l~pG--D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i 227 (385)
..+..++++.|++.+ ++... ++|.+..++++++ +++| |+|++++..|++...- + .......|.++..+
T Consensus 125 ~~Qt~la~LtG~~~a----naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v-~---~t~a~~~G~ev~~~ 196 (954)
T PRK05367 125 NFQTMVADLTGLEIA----NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDV-L---RTRAEPLGIEVVVG 196 (954)
T ss_pred HHHHHHHHHHCCChh----hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHH-H---HHHHHhCCCEEEEe
Confidence 367789999999974 44444 5566777777777 5664 9999998766543221 0 01123456655555
Q ss_pred eccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC-CCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CC
Q 016668 228 PYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS-AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (385)
Q Consensus 228 ~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s-~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-ga 305 (385)
+ .+. |++ ..+...+++..+ .+|...|+++|+++||++|+++++|..+.+... ...|-+ |+
T Consensus 197 ~--~~~-----d~~-------~~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~----l~~pge~Ga 258 (954)
T PRK05367 197 D--AAK-----ALD-------HDDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTL----LTPPGEMGA 258 (954)
T ss_pred c--Ccc-----CCC-------cccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccC----CCChhhcCC
Confidence 4 321 111 113334445444 467888999999999999999999997743322 223445 99
Q ss_pred cEEEECCCcc-----CccccEEEEEEeCC
Q 016668 306 DVVTTTTHKS-----LRGPRGGMIFFKKD 329 (385)
Q Consensus 306 Div~~S~hK~-----l~GprgG~I~~~~~ 329 (385)
||+++++||| ++||..|++.++++
T Consensus 259 Di~vgs~qkfg~P~g~GGP~aGflavr~~ 287 (954)
T PRK05367 259 DIAVGSAQRFGVPMGFGGPHAAYFAVRDA 287 (954)
T ss_pred CEEEeeCcccCCCCCCCCCCEEEEEECHH
Confidence 9999999999 68898899999884
No 308
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.94 E-value=1.6e-07 Score=96.05 Aligned_cols=231 Identities=14% Similarity=0.115 Sum_probs=123.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~p 191 (385)
..|.|.+++...+.+....+ + .++ .+....+++.++++.... -..+..||++|+..++.... ..
T Consensus 70 ~~p~v~~ai~~q~~~~~~~~------~-~~~----~~~~la~~L~~~~~~~~~---~v~f~~SGsEA~e~AiklAr~~tg 135 (433)
T PRK00615 70 SHPKICDAIQQGAERGTSYG------L-TSE----QEILFAEELFSYLGLEDH---KIRFVSSGTEATMTAVRLARGITG 135 (433)
T ss_pred CCHHHHHHHHHHHHhCCCCC------C-CCH----HHHHHHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 36888888777665321101 1 122 222234567777754321 23567899999999987542 23
Q ss_pred CCEEeecCCCCCccccCCcccc-ccccccCcceE----EEE-eccccCCC---CCCCHHHHHHHhhhc--CCcEEEEcCC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTP-KRRVSGTSIYF----ESM-PYRLDEST---GLVDYDMLEKTAILF--RPKLIIAGAS 260 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~-~~~~~~~g~~~----~~i-~~~~~~~~---~~iD~d~le~~i~~~--~pklIi~~~s 260 (385)
..+|+...-.| ||+-.. ...++..+... ... +-...... ...|++++++.+... +..+||+.+.
T Consensus 136 r~~ii~~~~~y-----HG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv 210 (433)
T PRK00615 136 RSIIIKFLGCY-----HGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPI 210 (433)
T ss_pred CCEEEEEcCcc-----CCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCC
Confidence 45677655332 342100 00111111000 000 00000000 123788999888543 3456777642
Q ss_pred --CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-cCCCC-CCcEEEECCCccCc-cccEEEEEEeCCCC
Q 016668 261 --AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 331 (385)
Q Consensus 261 --~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~~ 331 (385)
..+...+ +++|+++|++||+++|+|++| .|+..+... ..-+. ..|+++ +.|.+. |..+|++++++
T Consensus 211 ~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~-tG~R~G~~ga~~~~gv~PDi~~--~gK~lggG~p~~av~~~~--- 284 (433)
T PRK00615 211 CANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVV-TGFRVAQGGAAAIYHVKPDITV--YGKILGGGLPAAAVVAHK--- 284 (433)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-ccccccHhHHHHhcCCCCCeEE--EcccccCCcceeeeeecH---
Confidence 1232233 679999999999999999999 576222111 11122 457776 579996 45688888887
Q ss_pred chhHHHHHHhh--ccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 332 LGVELESAINN--AVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 332 ~~~~~~~~i~~--~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.+.+.. ..+.+..-+.++..+++...+|+.+.+++.
T Consensus 285 ---~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~ 324 (433)
T PRK00615 285 ---SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGF 324 (433)
T ss_pred ---HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccH
Confidence 57666632 122221212345556666667877766554
No 309
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.93 E-value=6.7e-08 Score=98.48 Aligned_cols=235 Identities=16% Similarity=0.084 Sum_probs=124.5
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~---- 190 (385)
+|.|.+++.+.+.. ....... . + .++ .+....+++.+++....+ ...+.+||++|+.+++.....
T Consensus 60 ~p~v~~ai~~q~~~-~~~~~~~-~-~-~~~----~~~~la~~l~~~~p~~~~---~v~f~~sGseA~e~A~klar~~~~~ 128 (423)
T PRK05964 60 HPYIDQAIREQLDR-LDHVIFA-G-F-THE----PAERLAQRLVALTPGGLD---HVFFSDSGSVAVEVALKMALQYWRN 128 (423)
T ss_pred CHHHHHHHHHHHhh-CCCcccc-c-c-CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 68888888777643 2111100 0 1 122 222345567777742221 135678999999998875421
Q ss_pred ---C-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCCCCCCCHHHHHHHhhhc--CC
Q 016668 191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTGLVDYDMLEKTAILF--RP 252 (385)
Q Consensus 191 ---p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~~~~iD~d~le~~i~~~--~p 252 (385)
+ ..+|+...-.| ||.... .++..+. .+..++++.+ +....+++.+++.+.+. +.
T Consensus 129 ~~~~~r~~ii~~~~~y-----HG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~l~~~l~~~~~~i 200 (423)
T PRK05964 129 RGEPGRSRFLSLRGGY-----HGDTIG--TMSVGDRGGMHALYTPLLFEQVTAPFPPD-GYEQATLDALEALLEKHAGEI 200 (423)
T ss_pred cCCCCCcEEEEEcCCc-----CCccHH--HHhcCCCccccccccCcCCCCEEeCCCcc-hhHHHHHHHHHHHHHhCCCcE
Confidence 2 35788776433 332100 0111110 1122333211 00112378888887532 34
Q ss_pred cEEEEcCC-C--CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCccc--c
Q 016668 253 KLIIAGAS-A--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRGP--R 320 (385)
Q Consensus 253 klIi~~~s-~--~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~Gp--r 320 (385)
..|++.+. . .+. ...+++|+++|+++|+++|+|++| .|+...|.. . ..+. ..|++++ .|+|.|. +
T Consensus 201 aavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~v~pDi~~~--~K~l~gG~~p 277 (423)
T PRK05964 201 AAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-TGFGRTGTLFACEQAGVSPDIMCL--SKGLTGGYLP 277 (423)
T ss_pred EEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhHHHhcCCCCCeeee--ehhhhcCccc
Confidence 46677541 1 222 223899999999999999999999 565333321 1 1112 4577654 5999543 5
Q ss_pred EEEEEEeCCCCchhHHHHHHhhc------cCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 321 GGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~------~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
.|++++++ ++.+.+... .+.+.. +.++..+++...+++.+..+++.+...+
T Consensus 278 ~~av~~~~------~i~~~~~~~~~~~~~~~~~T~-~~np~~~aaa~a~l~~l~~~~~~~~~~~ 334 (423)
T PRK05964 278 LAATLCTA------EIFEAFYSDDRAKAFMHSPSY-TANPLACAAANASLDLFEDEPVLERVAA 334 (423)
T ss_pred ceEEEEcH------HHHHhhhcCCcccccccCCCC-CcCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 67777776 576666421 111222 2455566666667877766655444333
No 310
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.93 E-value=7e-08 Score=94.65 Aligned_cols=271 Identities=17% Similarity=0.190 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHhh-hccccc-------cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 016668 89 EVCEIITKEKERQF-KSLELI-------ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (385)
Q Consensus 89 ~~~~~i~~e~~~~~-~~l~Li-------asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~l 160 (385)
-++.+.+.-++..+ +.++|- ....+.-+.|.+|-...+.......|-+ ..|.+ .+.+. ...-+
T Consensus 12 pIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~---i~G~~---~f~~~---~~~ll 82 (396)
T COG1448 12 PILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLP---IEGLP---EFLEA---VQKLL 82 (396)
T ss_pred chhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCC---cCCcH---HHHHH---HHHHh
Confidence 35666666555555 557765 3455567888888766555444333333 23433 44432 23457
Q ss_pred cCCC-----CCCCcceeecCCcHHHHHHHHHHh--ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 161 FNLD-----ENKWGVNVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 161 fg~~-----~~~~~~~V~~~sGs~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
||.+ ...+ +.+|+.+||-|+..+..-+ ..|..+|.+++|..+-|.. .....|.+++..+| .|.
T Consensus 83 FG~d~~~l~~~Rv-~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~--------If~~aGl~v~~Y~Y-yd~ 152 (396)
T COG1448 83 FGADSPALAEDRV-ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKA--------IFEAAGLEVETYPY-YDA 152 (396)
T ss_pred cCCCcHHHHhhhH-hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHH--------HHHhcCCceeeeec-ccc
Confidence 8855 2223 5689999999887765444 5678889999998766532 23456776666665 465
Q ss_pred CCCCCCHHHHHHHhhhcCC-cEEEE-cCCCCCCCC-----CHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-
Q 016668 234 STGLVDYDMLEKTAILFRP-KLIIA-GASAYPRDF-----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK- 303 (385)
Q Consensus 234 ~~~~iD~d~le~~i~~~~p-klIi~-~~s~~~~~~-----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~- 303 (385)
++..+|++.+-..++.... .+|++ +..|||+-. .+++|.++.++.|.+-+.|.|+ -|+-. |.-. ..+.
T Consensus 153 ~~~~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AY-QGF~~-GleeDa~~lR~ 230 (396)
T COG1448 153 ETKGLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAY-QGFAD-GLEEDAYALRL 230 (396)
T ss_pred ccccccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhh-hhhcc-chHHHHHHHHH
Confidence 6778999998877765333 34554 344666533 3789999999999999999995 44422 1110 1111
Q ss_pred ----CCc-EEEECCCccC--ccccEEE-EEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHH-----HHHHhhCc
Q 016668 304 ----YCD-VVTTTTHKSL--RGPRGGM-IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAV-----CLKHAQSP 370 (385)
Q Consensus 304 ----gaD-iv~~S~hK~l--~GprgG~-I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~-----Al~e~~~~ 370 (385)
+-. ++++|++|+| .|-|.|. .+.-++......+.+.+...+ ..+.++|..|..+-.+. .|++....
T Consensus 231 ~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~i-R~~ySnPP~~Ga~vva~IL~~p~Lra~W~~ 309 (396)
T COG1448 231 FAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAII-RTNYSNPPAHGAAVVATILNNPELRAEWEQ 309 (396)
T ss_pred HHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHH-HhccCCCchhhHHHHHHHhCCHHHHHHHHH
Confidence 232 6899999996 7788653 333322100001222222222 23456777776655554 45555555
Q ss_pred hHHHHHHHHhc
Q 016668 371 EFKVYQNKSAC 381 (385)
Q Consensus 371 ~~~~y~~~v~~ 381 (385)
|...++.++.+
T Consensus 310 El~~Mr~Ri~~ 320 (396)
T COG1448 310 ELEEMRQRILE 320 (396)
T ss_pred HHHHHHHHHHH
Confidence 55566665544
No 311
>PRK12403 putative aminotransferase; Provisional
Probab=98.93 E-value=1.6e-07 Score=96.75 Aligned_cols=231 Identities=17% Similarity=0.142 Sum_probs=118.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCC-CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYG-GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~-G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--- 189 (385)
-+|.|.+++...+.. +..+. +++. .++...+ ..++++++++...+ ..++++|||+||.+++....
T Consensus 71 ~hp~v~~A~~~q~~~-~~~~~---~~~~~~~~~~~~----lae~L~~~~p~~~~---~v~f~~SGseA~e~AiklAr~~~ 139 (460)
T PRK12403 71 GRKDLAAAAARQMEQ-LPYYN---MFFHTTHPAVIE----LSELLFSLLPGHYS---HAIYTNSGSEANEVLIRTVRRYW 139 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCee---cccccCCHHHHH----HHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 468899998877653 32211 1222 2332222 44567788864321 24667899999999987663
Q ss_pred ----cCCCEEeecCCCCCccccCCccccccccccCcce-----------EEEEecccc----CCCC-----CCCHHHHHH
Q 016668 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD----ESTG-----LVDYDMLEK 245 (385)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----------~~~i~~~~~----~~~~-----~iD~d~le~ 245 (385)
++++.+++.... ++ ||+... .++..+.. +..++++.. .+.. ..+++++++
T Consensus 140 ~~~g~~~r~~ii~~~~--~y--HG~t~~--~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~ 213 (460)
T PRK12403 140 QVLGKPQKKIMIGRWN--GY--HGSTLA--ATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEE 213 (460)
T ss_pred HhhCCCCCcEEEEECC--Cc--CcccHh--hhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHH
Confidence 233444433221 22 333110 11111111 112221110 0000 011355665
Q ss_pred Hhhh---cCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEECCC
Q 016668 246 TAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTH 313 (385)
Q Consensus 246 ~i~~---~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S~h 313 (385)
.+.+ .+...||+.+. ..+...+ +++|+++|+++|++||+|++| .|+--.|.. ..-++ ..|+++ +.
T Consensus 214 ~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGRtG~~~a~e~~gv~PDiv~--~g 290 (460)
T PRK12403 214 KILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI-GGFGRTGEWFAHEHFGFEPDTLS--IA 290 (460)
T ss_pred HHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCchhhhhhhcCCCCCeEE--Ec
Confidence 5532 23446777542 2233344 899999999999999999999 454222321 11122 358886 56
Q ss_pred ccCc-c--ccEEEEEEeCCCCchhHHHHHHhh--ccC--CCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 314 KSLR-G--PRGGMIFFKKDPVLGVELESAINN--AVF--PGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 314 K~l~-G--prgG~I~~~~~~~~~~~~~~~i~~--~~f--p~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|.|. | |-||++ +++ ++.+.+.. ..| ..+++ .++...|+..++|+.+.++++
T Consensus 291 K~lggG~~Piga~v-~~~------~i~~~~~~~~~~~~~~~T~~-gnPl~~Aaala~L~~i~~~~l 348 (460)
T PRK12403 291 KGLTSGYVPMGGLV-LSK------RIAEALVEQGGVFAHGLTYS-GHPVAAAVAIANLKALRDEGV 348 (460)
T ss_pred ccccccccceEEEE-ECH------HHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhccH
Confidence 9985 4 455555 555 56555532 112 22333 345566666667877766554
No 312
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.92 E-value=1.5e-07 Score=95.95 Aligned_cols=234 Identities=15% Similarity=0.006 Sum_probs=124.8
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
+|.+.+++...+.+ ....+.. ..+++ ...+ ..+++.++.+.+..+ ..++.+||++|+..++... ....
T Consensus 59 ~~~i~~a~~~~~~~-~~~~~~~---~~~~~---~~~~-la~~l~~~~~~~~~~--~~~f~~sGsea~e~Alklar~~~~r 128 (425)
T PRK08088 59 HPKVVAAVEAQLKK-LSHTCFQ---VLAYE---PYLE-LCEKMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATKR 128 (425)
T ss_pred CHHHHHHHHHHHhh-CCCcccc---ccCCH---HHHH-HHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHHhCC
Confidence 78888888777653 2111111 11222 1222 345567776643211 2467889999988887654 2234
Q ss_pred CEEeecCCCCCccccCCccccccccc------cCc-----ceEEEEeccccCCCCCC--CHHHHHHHhh----hcCCcEE
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVS------GTS-----IYFESMPYRLDESTGLV--DYDMLEKTAI----LFRPKLI 255 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~------~~g-----~~~~~i~~~~~~~~~~i--D~d~le~~i~----~~~pklI 255 (385)
.+|+..++.|- |.......+. ..+ ..+...+++.+..+... +++++++.++ ..++.+|
T Consensus 129 ~~iv~~~~~yH-----G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aav 203 (425)
T PRK08088 129 SGVIAFTGAYH-----GRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAI 203 (425)
T ss_pred CeEEEECCccC-----CccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEE
Confidence 45666665432 2210000000 000 00112223222111111 1556888775 1345677
Q ss_pred EEcCCC-CC-CCC----CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccC-ccccEEEEEE
Q 016668 256 IAGASA-YP-RDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFF 326 (385)
Q Consensus 256 i~~~s~-~~-~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l-~GprgG~I~~ 326 (385)
++.+.. ++ ... .+++|.++|+++|+++|.|++|. |+...|... .++ +.+.-+.|++|.+ +|.|.|++++
T Consensus 204 i~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~-g~g~~g~~~-~~~~~~~~pdi~s~sK~l~~G~rig~v~~ 281 (425)
T PRK08088 204 IIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQT-GAGRTGTLF-AMEQMGVAADLTTFAKSIAGGFPLAGVTG 281 (425)
T ss_pred EECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCcchh-HHhhcCCCCCEEEEeccccCCCcceeeEe
Confidence 776432 22 222 38999999999999999999985 543333221 222 2223357788998 5678899999
Q ss_pred eCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++ ++.+.+.........+ .+....++....++....+++
T Consensus 282 ~~------~~~~~~~~~~~~~t~~-~~~~~~~a~~~~l~~~~~~~~ 320 (425)
T PRK08088 282 RA------EVMDAIAPGGLGGTYA-GNPIACAAALAVLKVFEQENL 320 (425)
T ss_pred cH------HHHhhcCCCCCCCCCC-cCHHHHHHHHHHHHHHHhcCH
Confidence 87 6777775544433343 344455566667776654444
No 313
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.91 E-value=2.4e-07 Score=95.02 Aligned_cols=232 Identities=16% Similarity=0.093 Sum_probs=122.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.+-.. .. +++ .++ ......+++.+++....+ ...+++|||+|+..++....
T Consensus 92 ~hp~v~~Av~~ql~~l~~---~~-~~~-~~~----~~~~lAe~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~t~ 159 (442)
T TIGR03372 92 RNPNVIAAVENQLAKQPL---HS-QEL-LDP----LRALLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQS 159 (442)
T ss_pred CCHHHHHHHHHHHHhCCC---cc-ccc-CCH----HHHHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHh
Confidence 478999998877753221 11 122 222 222345567777754322 24567899999999887442
Q ss_pred -cCCCEEeecCCCCCccccCCccccccccccCcce-EEEEeccccCCC---CCCCHHHHHHHhhh-----cCCcEEEEcC
Q 016668 190 -KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMPYRLDEST---GLVDYDMLEKTAIL-----FRPKLIIAGA 259 (385)
Q Consensus 190 -~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~i~~~~~~~~---~~iD~d~le~~i~~-----~~pklIi~~~ 259 (385)
+...+|+...-.| ||+.. ..+...+.. +.....+..+.- -..|.+++++.++. .+...|++.+
T Consensus 160 ~~gr~~ii~~~~~y-----HG~t~--~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEp 232 (442)
T TIGR03372 160 PRGKFTFIAASGAF-----HGKSL--GALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEP 232 (442)
T ss_pred hcCCcEEEEECCCc-----cCCCH--HHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 1245777766433 33210 011121110 000000000000 02467777776642 2345667654
Q ss_pred C--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCcc--ccEEEEEEeC
Q 016668 260 S--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRGGMIFFKK 328 (385)
Q Consensus 260 s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~G--prgG~I~~~~ 328 (385)
. ..+...+ +++++++|+++|+++|+|++| .|+--.|... .-+. ..|+++ +.|.+.| ...|.+++++
T Consensus 233 v~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~-tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~G~~Pigavv~~~ 309 (442)
T TIGR03372 233 IQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ-TGMGRTGKMFACEHEGVQPDILC--LAKALGGGVMPIGATIATE 309 (442)
T ss_pred ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc-cCCCccccchhhhhcCCCCCeee--ehhhhcCCcccceEEEecH
Confidence 2 2233344 899999999999999999999 4542233211 1122 468876 5799954 2345555665
Q ss_pred CCCchhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 329 DPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
++.+.+... .+..++++ ++...|+..++|+.+.++++.+
T Consensus 310 ------~i~~~~~~~~~~~~~T~~g-np~~~Aaa~a~L~~i~~~~l~~ 350 (442)
T TIGR03372 310 ------AVFSVLFDNPFLHTTTFGG-NPLACAAALATINELLEKNLPA 350 (442)
T ss_pred ------HHHHhhhccCccccCCCCC-CHHHHHHHHHHHHHHHhccHHH
Confidence 566655322 22223332 3445555555787776665433
No 314
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.89 E-value=4e-07 Score=92.79 Aligned_cols=231 Identities=15% Similarity=0.096 Sum_probs=123.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~p 191 (385)
..|.|.+++...+.. .. +.....+ .++ .+....+++.+++.....+ ..++.+|||+|+..++.... ..
T Consensus 57 ~~p~v~~ai~~ql~~-~~--~~~~~~~-~~~----~~~~la~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tg 126 (421)
T PRK09792 57 RHPDLVAAVEQQLQQ-FT--HTAYQIV-PYE----SYVTLAEKINALAPVSGQA--KTAFFTTGAEAVENAVKIARAHTG 126 (421)
T ss_pred CCHHHHHHHHHHHHh-cc--CcccCcc-CCH----HHHHHHHHHHHhCCCCCCc--eEEEeCChHHHHHHHHHHHHHhcC
Confidence 378888888777653 22 1111011 122 2222344566666422101 24567899999999887542 23
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc-------------ceEEEEeccccCCCCC---CCHHHHHHHhhh----cC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDESTGL---VDYDMLEKTAIL----FR 251 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~~~~~~~~---iD~d~le~~i~~----~~ 251 (385)
..+|+...-.| ||+... .++..+ ..+..++++.+. ++. -|++.+++.++. .+
T Consensus 127 r~~ii~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~~~~~~~~ 198 (421)
T PRK09792 127 RPGVIAFSGGF-----HGRTYM--TMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFKSDIEAKQ 198 (421)
T ss_pred CCeEEEECCCc-----CCccHH--HHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHHhccCCCc
Confidence 45787776433 332100 001111 012334443321 111 135778887752 34
Q ss_pred CcEEEEcCCCCC--C-CCC---HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccE
Q 016668 252 PKLIIAGASAYP--R-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (385)
Q Consensus 252 pklIi~~~s~~~--~-~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~Gprg 321 (385)
+++|++.+...+ . ..+ +++|+++|+++|+++|.|+.+ .|+...|... ..+. ..|+ .++.|.| +|.+.
T Consensus 199 iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~-tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~G~pi 275 (421)
T PRK09792 199 VAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQ-SGFARTGKLFAMDHYADKPDL--MTMAKSLAGGMPL 275 (421)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCCCCchhHHHhcCCCCcE--EEeehhhcCCCce
Confidence 678888765332 2 224 899999999999999999997 4553344321 1121 3565 4557998 45678
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|++++++ ++.+.+.......+.+++.....++ .+.++.+.++++
T Consensus 276 gav~~~~------~i~~~~~~~~~~~T~~gnpl~~aaa-~a~l~~l~~~~~ 319 (421)
T PRK09792 276 SGVVGNA------NIMDAPAPGGLGGTYAGNPLAVAAA-HAVLNIIDKESL 319 (421)
T ss_pred EEEEEcH------HHHhccCCCCcCCCCCCCHHHHHHH-HHHHHHHHhhhH
Confidence 8888887 5666665433333343333333333 345555544443
No 315
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=9.1e-08 Score=90.99 Aligned_cols=229 Identities=16% Similarity=0.182 Sum_probs=129.9
Q ss_pred HHHHHHHHHHhh-hccccccCCCCC-cHHHHHHHhhHhhccCCCCCCCC--CCCCCcHHHHHHHHHHHHHHHHHcCCCCC
Q 016668 91 CEIITKEKERQF-KSLELIASENFT-SRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDEN 166 (385)
Q Consensus 91 ~~~i~~e~~~~~-~~l~Liasen~~-s~~V~~al~s~l~~~y~~g~p~~--r~~~G~~~~~~le~~~~~~la~lfg~~~~ 166 (385)
-.++++-..-.+ .+..+...-|+. -|++.+.....++.--++|.-.. -.|.|..--+.+-++....+.+-+|.+-.
T Consensus 17 ~~lMdDl~d~Lrt~g~imLggGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit 96 (417)
T COG3977 17 TQLMDDLNDGLRTPGAIMLGGGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNIT 96 (417)
T ss_pred HHHHHHHHhhccCCCceeeCCCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCc
Confidence 344444433344 444444555554 57777766555443333331110 01333322334444555667788887643
Q ss_pred CCcceeecCCcHH-HHHHHHHHhc---cCCC--EEe-ecCCCCCccccCCccccccccccCc-ceEEEEe-ccccCC---
Q 016668 167 KWGVNVQPLSGSP-ANFEVYTAIL---KPHD--RIM-GLDLPHGGHLSHGFMTPKRRVSGTS-IYFESMP-YRLDES--- 234 (385)
Q Consensus 167 ~~~~~V~~~sGs~-A~~~a~~all---~pGD--~Vl-~~~~~~ggh~s~~~~~~~~~~~~~g-~~~~~i~-~~~~~~--- 234 (385)
+ -|+..|+||+ |.+.++.-+- ..|+ +|+ -+.|+|-|+-.-+ .-+ ..+...| .++.+.
T Consensus 97 ~--~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~---------l~~d~fVs~kP~iel~~~g~F 165 (417)
T COG3977 97 A--QNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAG---------LEEDLFVSAKPNIELLPAGQF 165 (417)
T ss_pred c--ceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccc---------cCccceeeccCCcccccccce
Confidence 2 3788899997 7766665553 3454 343 3356665542211 111 1111111 122222
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC-----CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC---CCc
Q 016668 235 TGLVDYDMLEKTAILFRPKLIIAGASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK---YCD 306 (385)
Q Consensus 235 ~~~iD~d~le~~i~~~~pklIi~~~s~~~~-----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~---gaD 306 (385)
..++|+++++-. ..+.+|+++-|.+|+ ...+.+|.++|++||+.|++|+|++. -+.+...+... +-.
T Consensus 166 KY~vDF~~l~i~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~--PFP~iifsd~~~~w~~N 240 (417)
T COG3977 166 KYHVDFEHLHIG---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV--PFPGIIFSDATPLWNEN 240 (417)
T ss_pred eeccCHHHcccc---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC--CCCceecccccccCCCC
Confidence 237899888642 257788888777663 34578889999999999999999743 23332222222 334
Q ss_pred -EEEECCCcc-CccccEEEEEEeCCCCchhHHHHHHh
Q 016668 307 -VVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 307 -iv~~S~hK~-l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
+.++|++|. |+|-|.|+++.+. ++...+.
T Consensus 241 iilC~SLSK~GLPG~R~GIiIane------~viqait 271 (417)
T COG3977 241 IILCMSLSKLGLPGSRCGIIIANE------KVIQAIT 271 (417)
T ss_pred EEEEeehhhcCCCCcceeEEEccH------HHHHHHH
Confidence 679999996 6888999999988 5666654
No 316
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.86 E-value=6.2e-07 Score=92.05 Aligned_cols=232 Identities=15% Similarity=0.034 Sum_probs=124.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
.+|.|.+++...+.+.. +....++ .++ .+..+.+++.+++....+ ...+++|||+|+.+++... ...
T Consensus 58 ~~p~v~~Ai~~ql~~~~---~~~~~~~-~~~----~~~~la~~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~tg 126 (443)
T PRK08360 58 NNPRVVKAIKEQTDKLI---HYTPIYG-FPV----EPLLLAEKLIEIAPGDNP---KVSFGLSGSDANDGAIKFARAYTK 126 (443)
T ss_pred CCHHHHHHHHHHHHhcc---Ccccccc-CcH----HHHHHHHHHHHhCCCCCC---EEEEcCCHHHHHHHHHHHHHHhcC
Confidence 37888888887765321 1111111 122 222244567777754422 2356688999999988754 233
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCC-CC--------CCCHHHHHHHhhh-
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES-TG--------LVDYDMLEKTAIL- 249 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~-~~--------~iD~d~le~~i~~- 249 (385)
..+|+...-.| ||+-.. .++..+ ..+..++++-... .+ ..+++.+++.++.
T Consensus 127 r~~ii~~~~~y-----HG~t~~--a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (443)
T PRK08360 127 RRKILSYLRSY-----YGSTYG--AMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE 199 (443)
T ss_pred CCeEEEEeCCc-----CCcCHH--HHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhc
Confidence 45676654322 232100 001111 0122333321000 00 0234556666642
Q ss_pred ---cCCcEEEEcCCCC--CCCC----CHHHHHHHHHHcCcEEEEeccccccccccCcccC--CCC-CCcEEEECCCccC-
Q 016668 250 ---FRPKLIIAGASAY--PRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PFK-YCDVVTTTTHKSL- 316 (385)
Q Consensus 250 ---~~pklIi~~~s~~--~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~~-gaDiv~~S~hK~l- 316 (385)
.+++.|++.+..+ +... -+++|.++|+++|+++|+|++|. |+...|.... .+. ..|+++ ++|.+
T Consensus 200 ~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~gr~G~~~a~~~~~~~pDiit--lsK~l~ 276 (443)
T PRK08360 200 VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQS-GLGRTGKWFAIEHFGVEPDIIT--LGKPLG 276 (443)
T ss_pred cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCccchhhhhcCCCCCEEE--eccccc
Confidence 3567888875322 2222 28999999999999999999984 5543443211 122 347764 48998
Q ss_pred ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 317 ~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.|.+.|++++++ ++.+.+.........+++... .++...+++.+.++++.
T Consensus 277 ~G~pigav~~~~------~i~~~~~~~~~~~T~~~~p~~-~aaa~a~l~~l~~~~l~ 326 (443)
T PRK08360 277 GGLPISATIGRA------EIMDSLPPLAHAFTLSGNPVA-SAAALAVIEEIEEKNLL 326 (443)
T ss_pred CCceeEEEEEcH------HHHhhhcCCCCCCCCCcCHHH-HHHHHHHHHHHHHcCHH
Confidence 567889999887 577766543333333333333 55555577776665543
No 317
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.86 E-value=2.8e-07 Score=95.96 Aligned_cols=238 Identities=16% Similarity=0.088 Sum_probs=124.2
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceeecCCcHHHHHHHHHHhc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg-~~~~~~~~~V~~~sGs~A~~~a~~all--- 189 (385)
-+|.|.+++.+.+.. ....... +...++ .+....+++.+++. .+.+ ...+++||++||.+++....
T Consensus 106 ~hp~v~~Av~~ql~~-~~~~~~~--~~~~~~----~~~~lae~L~~~~~~~~~~---~v~f~~SGsEA~e~AlKlAr~~~ 175 (504)
T PLN02760 106 SEPRLVAAATEQLNK-LPFYHSF--WNRTTK----PSLDLAKELLEMFTARKMG---KVFFTNSGSEANDTQVKLVWYYN 175 (504)
T ss_pred CCHHHHHHHHHHHhh-ccceecc--cccCcH----HHHHHHHHHHhhcCCCCCC---EEEEeCChHHHHHHHHHHHHHHH
Confidence 379999999888753 3211110 011222 22223456667653 3321 23557899999999988663
Q ss_pred ----cCC-CEEeecCCCCCccccCCccccccccccCcce------------EEEEecccc-----CCCC-----CCCHHH
Q 016668 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLD-----ESTG-----LVDYDM 242 (385)
Q Consensus 190 ----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~------------~~~i~~~~~-----~~~~-----~iD~d~ 242 (385)
.+| ++|+..+-.| ||+.. ..+++.|.. +..++++.. +... ...+++
T Consensus 176 ~~~g~~~r~~iI~~~~~y-----HG~t~--~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 248 (504)
T PLN02760 176 NALGRPNKKKFIARSKSY-----HGSTL--ISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADN 248 (504)
T ss_pred HhcCCCCCcEEEEECCCc-----cCChH--hhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHH
Confidence 132 5777766332 33311 011112210 111121100 0000 011245
Q ss_pred HHHHhhh---cCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccc-cccccccCcccCCCC-CCcEEEEC
Q 016668 243 LEKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTT 311 (385)
Q Consensus 243 le~~i~~---~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah-~~Gli~~g~~~~p~~-gaDiv~~S 311 (385)
+++.+.. .++..||+.+. ..+...+ +++|+++|+++|+++|+|++| +.|-........-++ ..|++++
T Consensus 249 le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDivtl- 327 (504)
T PLN02760 249 LENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSL- 327 (504)
T ss_pred HHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcEEEe-
Confidence 7766632 23456777642 1233444 999999999999999999998 344432211111112 3687665
Q ss_pred CCccCcc---ccEEEEEEeCCCCchhHHHHHHhhc-------cCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 312 THKSLRG---PRGGMIFFKKDPVLGVELESAINNA-------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 312 ~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~~-------~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
.|.|.| |-|+ +++++ ++.+.+... ....++++ ++..+++...+|+.+.++++.+..++
T Consensus 328 -gK~lggG~~PigA-v~~~~------~i~d~~~~~~~~~~~~~h~~T~~g-nPl~~Aaala~Le~i~~~~l~~~~~~ 395 (504)
T PLN02760 328 -AKALSSAYMPIGA-VLVSP------EISDVIHSQSNKLGSFAHGFTYSG-HPVSCAVALEALKIYKERNIPEHVNK 395 (504)
T ss_pred -cccccCCccccce-EeecH------HHHhhhhcccccccCcccCCCCCC-CHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 599965 4455 66666 566666421 12234444 45555555567887777666544443
No 318
>PRK07046 aminotransferase; Validated
Probab=98.86 E-value=4.1e-07 Score=93.59 Aligned_cols=222 Identities=14% Similarity=0.069 Sum_probs=124.9
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
+|.|.+++...+..-...+. .+ +.+....+++.++++.+. ..+++|||+|+..++... ....
T Consensus 93 ~p~i~~Av~~q~~~~~~~~~-------~~----~~~~~lAe~l~~~~~~~~-----v~F~nSGtEA~e~AlrlAR~~TGr 156 (453)
T PRK07046 93 PAPVARALAEQARRGLTTML-------PS----EDAAWVGEELARRFGLPY-----WQVATTATDANRFVLRWARAVTGR 156 (453)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------CC----HHHHHHHHHHHHHhCCCE-----EEEECCHHHHHHHHHHHHHHhhCC
Confidence 68888888877754221111 12 233335567777776543 356789999999988754 2345
Q ss_pred CEEeecCCCCCccccCCccccc-------cc---cccCcceE----EEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPK-------RR---VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~-------~~---~~~~g~~~----~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
++|+...-.| ||+.... .. ....|... ....+ ...|++.+++.+...+...||+.
T Consensus 157 ~~ii~~~g~Y-----HG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~nd~~~l~~~l~~~~vAavi~E 225 (453)
T PRK07046 157 PKILVFNGCY-----HGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVV------EFNDLAALEAALADGDVAAVLAE 225 (453)
T ss_pred CEEEEECCCC-----CCCcHHhHhhccCCCCCCCCCCCCCCccccCceEee------CCCCHHHHHHHhCCCCeEEEEEC
Confidence 7788765333 3331000 00 00011100 00110 02388999988854456677776
Q ss_pred CCC--CCCCC----CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCc-cccEEEEEEeCCC
Q 016668 259 ASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 330 (385)
Q Consensus 259 ~s~--~~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~ 330 (385)
+.. .+... -+++++++|+++|+++|.|+.+..++-.+| ...-++ ..|+++ +.|.+. |...|.+++++
T Consensus 226 Pi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg-~~~~~gv~PDi~t--~gK~lggG~Pi~av~g~~-- 300 (453)
T PRK07046 226 PAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGG-YTRAHGLEPDFLV--VGKPIAGGVPCAVYGFSA-- 300 (453)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcc-hhHHhCCCcccee--ehhhhcCCCcceeeeehH--
Confidence 432 12221 289999999999999999999863221222 221122 468876 469985 44567788877
Q ss_pred CchhHHHHHHhhcc---------CCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 331 VLGVELESAINNAV---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 331 ~~~~~~~~~i~~~~---------fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++.+.+.... ..++. +.++..+++..++|+.+.+++..
T Consensus 301 ----~i~~~~~~~~~~~~~~~~~~~~T~-~gnpl~~aa~~a~L~~l~~~~~~ 347 (453)
T PRK07046 301 ----ELAERAQAAKASAPPGHSGIGTTL-SANALAMAAMRATLAEVMTEAAY 347 (453)
T ss_pred ----HHHHHHhhccccCCCCCceeCCCC-cccHHHHHHHHHHHHHHhcccHH
Confidence 5766664211 11122 23444566656677777666553
No 319
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.86 E-value=4.2e-07 Score=94.01 Aligned_cols=231 Identities=19% Similarity=0.159 Sum_probs=120.9
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
+|.|.+++...+..-...+ ..+ +.+....+++.+.+..-. -..++.|||+|+..++... ....
T Consensus 117 ~p~v~~av~~ql~~~~~~~-------~~~----~~~~~lAe~l~~~~p~~~----~v~f~~SGsEA~e~AlklAR~~tgr 181 (474)
T PLN02482 117 DDEVLAALAETMKKGTSFG-------APC----LLENVLAEMVIDAVPSVE----MVRFVNSGTEACMGVLRLARAYTGR 181 (474)
T ss_pred CHHHHHHHHHHHhhCCCCC-------CCC----HHHHHHHHHHHHhCCCCC----EEEEeCChHHHHHHHHHHHHHhcCC
Confidence 6999999988875422111 112 233334566777764211 1355789999999988754 2334
Q ss_pred CEEeecCCCCCccccCCccccccccccCcce------EEEEeccccCCC---CCCCHHHHHHHhhhc--CCcEEEEcCC-
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------FESMPYRLDEST---GLVDYDMLEKTAILF--RPKLIIAGAS- 260 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~------~~~i~~~~~~~~---~~iD~d~le~~i~~~--~pklIi~~~s- 260 (385)
++|+...-.| ||+..........+.. ..-++....++. ..-|++++++.++.+ +..+||+.+.
T Consensus 182 ~~Ii~~~g~Y-----HG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~ 256 (474)
T PLN02482 182 EKIIKFEGCY-----HGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVV 256 (474)
T ss_pred CEEEEECCcc-----CCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCC
Confidence 6777765332 4421000000000000 000000000000 023789999888643 3456776543
Q ss_pred -CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-cCCCC-CCcEEEECCCccCcc-ccEEEEEEeCCCCc
Q 016668 261 -AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVL 332 (385)
Q Consensus 261 -~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~~~ 332 (385)
+.+...+ +++|+++|+++|++||+|++| .|+..+... ..-+. ..|++++ .|.+.| ...|.+++++
T Consensus 257 g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~-tGfR~g~~ga~~~~gv~PDi~t~--gK~lggG~Pigav~g~~---- 329 (474)
T PLN02482 257 GNSGFIVPKKEFLEGLREITKENGALLVFDEVM-TGFRIAYGGAQEYFGITPDLTTL--GKVIGGGLPVGAYGGRR---- 329 (474)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCeecCcchHhHHhCCCCCEEEe--cchhhCCCceEEEEEcH----
Confidence 1222222 779999999999999999999 576322111 11122 4577654 699954 3345557776
Q ss_pred hhHHHHHHhhc--cCC-CccCCChHHHHHHHHHHHHHhhCchHHHH
Q 016668 333 GVELESAINNA--VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (385)
Q Consensus 333 ~~~~~~~i~~~--~fp-~~qg~p~~~~iaala~Al~e~~~~~~~~y 375 (385)
++.+.+... .+. ++.+ .++..+++...+|+.+.+++..+.
T Consensus 330 --ei~~~~~~~~~~~~~~T~~-gnpl~~aAala~L~~l~~~~~~~~ 372 (474)
T PLN02482 330 --EIMEMVAPAGPMYQAGTLS-GNPLAMTAGIHTLKRLQQPGTYEY 372 (474)
T ss_pred --HHHHhhccCCCcccccCcc-hhHHHHHHHHHHHHHHhccCHHHH
Confidence 576666421 122 2222 344455555557777766555333
No 320
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.83 E-value=9.7e-07 Score=90.58 Aligned_cols=236 Identities=20% Similarity=0.160 Sum_probs=122.6
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~-- 190 (385)
...|.|.+++...+.+ ...... +...++ .+....+++.+++....+ ...+.+|||+|+..++.....
T Consensus 62 h~~p~v~~ai~~ql~~-l~~~~~---~~~~~~----~~~~la~~l~~~~p~~~~---~v~f~~sGseA~e~AlklAr~~~ 130 (442)
T PRK13360 62 HGRPEIVEAVRAQAGE-LDYAPA---FQMGHP----KAFELANRIAEIAPGGLN---HVFFTNSGSESVDTALKIALAYH 130 (442)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---CCcCCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 3468888888877643 221111 111233 222345567777642221 235678999999998864321
Q ss_pred -----C-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCCC--CC--------CCHHH
Q 016668 191 -----P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--GL--------VDYDM 242 (385)
Q Consensus 191 -----p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~~--~~--------iD~d~ 242 (385)
+ ..+|+...-.| ||+-. ..++..|. .+..+|++.+... .. -+.++
T Consensus 131 ~~~g~~~r~~ii~~~~~y-----HG~t~--gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 203 (442)
T PRK13360 131 RARGEGSRTRLIGRERGY-----HGVGF--GGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADE 203 (442)
T ss_pred HhcCCCCCcEEEEEcCCc-----CCccH--hhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHH
Confidence 2 35788776433 33210 01111110 1122332211000 00 02467
Q ss_pred HHHHhhhc---CCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEE
Q 016668 243 LEKTAILF---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTT 310 (385)
Q Consensus 243 le~~i~~~---~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~ 310 (385)
++++++.. ++.+|++.+. ..+...+ +++|+++|+++|+++|+|++|. |+.-.|.. ..-++ ..|+++
T Consensus 204 le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDivt- 281 (442)
T PRK13360 204 LERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAPFAAQYFGVTPDLLT- 281 (442)
T ss_pred HHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCCCccchhhhhcCCCCceee-
Confidence 77777532 3346676542 1233444 8999999999999999999993 43222221 11122 457774
Q ss_pred CCCccCcc---ccEEEEEEeCCCCchhHHHHHHhhc------cC-CCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 311 TTHKSLRG---PRGGMIFFKKDPVLGVELESAINNA------VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 311 S~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~~------~f-p~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
+.|.|.| |-|+ +++++ ++.+.+... .+ ..+.+ .++...++...+|+.+.++++.+..+
T Consensus 282 -~gK~l~gG~~P~ga-v~~~~------~i~~~~~~~~~~~~~~~~~~T~~-g~pl~~aaa~a~L~~l~~~~l~~~~~ 349 (442)
T PRK13360 282 -CAKGLTNGAIPMGA-VFVSS------EIHDAFMQGPEAGIEFFHGYTYS-GHPLACAAALATLDLYEREGLLTRAA 349 (442)
T ss_pred -eeeccccCccceEE-EEEcH------HHHHHhhcCCccccccccCCCCC-CCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 4699953 4444 66665 465555331 11 22333 35555666666888877666544333
No 321
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.82 E-value=2.1e-07 Score=95.42 Aligned_cols=233 Identities=14% Similarity=0.053 Sum_probs=122.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-+|.|.+++...+.+ ... +.. ....++ ......+++.+++.....+ ..++++||++|+..++... ...
T Consensus 73 ~~p~v~~ai~~q~~~-~~~-~~~--~~~~~~----~~~~la~~l~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tg 142 (443)
T PRK06058 73 SAPRVVEAVREQVAR-FTH-TCF--MVTPYE----GYVAVAEQLNRLTPGDHEK--RSALFNSGAEAVENAVKIARSYTG 142 (443)
T ss_pred CCHHHHHHHHHHHHh-ccC-ccc--cccCCH----HHHHHHHHHHHhCCCCCCC--EEEEeCCcHHHHHHHHHHHHHhhC
Confidence 478999998877753 211 110 001122 2222455677777532111 2456789999999988732 233
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc-------------ceEEEEecc--ccC-CCCCCC--------HHHHHHHh
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYR--LDE-STGLVD--------YDMLEKTA 247 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~--~~~-~~~~iD--------~d~le~~i 247 (385)
.++|+..+..| ||+... .+...+ ..+...+++ .+. .....+ .+.+++.+
T Consensus 143 r~~ii~~~~~y-----HG~t~~--al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 215 (443)
T PRK06058 143 RQAVVVFDHAY-----HGRTNL--TMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV 215 (443)
T ss_pred CCeEEEECCCc-----CcChHH--HHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhh
Confidence 47888876543 332100 011000 001112211 110 000111 22333333
Q ss_pred hhcCCcEEEEcCCC--CCCC----CCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-c
Q 016668 248 ILFRPKLIIAGASA--YPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-R 317 (385)
Q Consensus 248 ~~~~pklIi~~~s~--~~~~----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~ 317 (385)
...++..|++.+.. .+.. .-+++|+++|+++|+++|.|+.+. |+.-.|... .-++ ..|+++++ |.+ .
T Consensus 216 ~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~t-GfgRtG~~fa~~~~gv~PDiv~~g--K~l~~ 292 (443)
T PRK06058 216 GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQT-GFARTGAWFACEHEGIVPDLITTA--KGIAG 292 (443)
T ss_pred CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcChhhhHHHhcCCCCCEEEEc--ccccC
Confidence 22356677775421 1222 238999999999999999999984 653333211 1122 35888775 998 4
Q ss_pred cccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 318 GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 318 GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
|.+.|++++++ ++.+.+.......+.+ .++...++...+|+.+.+++..
T Consensus 293 G~Pi~av~~~~------~i~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~~~~~~l~ 341 (443)
T PRK06058 293 GLPLSAVTGRA------EIMDAPHPGGLGGTYG-GNPVACAAALAAIETIEEDDLV 341 (443)
T ss_pred CCccEEEEEcH------HHHhhccCCCCCCCCC-CCHHHHHHHHHHHHHHHHcCHH
Confidence 56678888877 5666665433323333 4444555556677776665553
No 322
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.82 E-value=3.8e-07 Score=92.95 Aligned_cols=232 Identities=15% Similarity=0.094 Sum_probs=124.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-+|.|.+++...+.+ ... .....+ .++ ... ...+++.+++.....+ ..++++|||+|+..++... ...
T Consensus 57 ~~p~v~~ai~~ql~~-~~~--~~~~~~-~~~---~~~-~la~~l~~~~p~~~~~--~~~f~~sGseA~e~AlklAr~~tg 126 (421)
T PRK06777 57 RHPKVVAAVRQQLDQ-FTH--TAYQIV-PYA---SYV-TLAERINALAPIDGPA--KTAFFTTGAEAVENAVKIARAYTG 126 (421)
T ss_pred CCHHHHHHHHHHHhh-ccc--cccccc-CCh---HHH-HHHHHHHHhCCCCCCc--eEEEeCCcHHHHHHHHHHHHHhhC
Confidence 368888888777653 211 110011 122 112 2345677776532101 2456789999999988744 233
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcc-------------eEEEEeccccCCCC---CCCHHHHHHHhhh----cC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDESTG---LVDYDMLEKTAIL----FR 251 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~i~~~~~~~~~---~iD~d~le~~i~~----~~ 251 (385)
..+|+...-.| ||+... .++..+. .+..++++-. ..+ ..|++.+++.++. .+
T Consensus 127 r~~ii~~~~~y-----HG~t~~--~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (421)
T PRK06777 127 RPGVIAFGGAF-----HGRTLL--TMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEALSSVERLFKADIAPDQ 198 (421)
T ss_pred CCeEEEEcCCc-----CCccHH--HHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHHHHHHHHHHHhccCCCc
Confidence 45677765332 332100 1111110 0111222210 001 1246678877742 23
Q ss_pred CcEEEEcCCC--CCC-CCC---HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccE
Q 016668 252 PKLIIAGASA--YPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (385)
Q Consensus 252 pklIi~~~s~--~~~-~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~Gprg 321 (385)
...|++.+.. .+. ..+ +++|+++|+++|+++|+|+.|. |+...|... ..++ ..|++ ++.|.+ +|.+.
T Consensus 199 iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~t-g~gr~g~~~~~~~~~~~pDiv--~~sK~l~~G~pi 275 (421)
T PRK06777 199 VAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQT-GFARTGKLFAMEYYDVKPDLI--TMAKSLGGGMPI 275 (421)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCccCCchhhhhhcCCCCCEE--eeehhhcCCCce
Confidence 4567775432 121 223 8999999999999999999985 664444321 1122 35766 578998 56788
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
|++++++ ++.+.+.......+.++ +....++...+|+.+.+++..
T Consensus 276 gav~~~~------~i~~~~~~~~~~~T~~~-~p~~~aaa~a~L~~~~~~~l~ 320 (421)
T PRK06777 276 SAVVGRA------EVMDAPAPGGLGGTYAG-NPLAVAAALAVLDVIAEEKLC 320 (421)
T ss_pred EEEEEcH------HHHhccCCCCCCCCCCc-CHHHHHHHHHHHHHHHhccHH
Confidence 9999887 57666654433344443 444455556677766555543
No 323
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.81 E-value=3.4e-07 Score=93.43 Aligned_cols=145 Identities=18% Similarity=0.150 Sum_probs=81.2
Q ss_pred CCcHHHHHHHHHHh--ccCCCEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCCCCCCCH
Q 016668 175 LSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTGLVDY 240 (385)
Q Consensus 175 ~sGs~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~~~~iD~ 240 (385)
+|||+|+..++... .....+|+...-.| ||+-.. .++..+ ..+..+|++.......-|+
T Consensus 110 ~sGseA~e~AlklAr~~tgr~~ii~~~~~y-----HG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (425)
T PRK09264 110 PTGTNAVEAALKLARKVTGRTNIVAFTNGF-----HGMTLG--SLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTL 182 (425)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEECCcc-----CCccHH--HHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHH
Confidence 69999999998754 23345777765332 332100 001100 0123334321100001367
Q ss_pred HHHHHHhhhc-----CCcEEEEcCC--CCCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCc
Q 016668 241 DMLEKTAILF-----RPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCD 306 (385)
Q Consensus 241 d~le~~i~~~-----~pklIi~~~s--~~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaD 306 (385)
+++++.+++. +..+|++.+. ..+. ...+++|+++|++||+++|+|+.|+ |+.-.|.. . ..++ ..|
T Consensus 183 ~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~~~~~~~v~PD 261 (425)
T PRK09264 183 AYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQA-GCGRTGTFFSFERAGITPD 261 (425)
T ss_pred HHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhh-CCccccHHHHHhhcCCCCC
Confidence 8888888542 2456776542 1222 2258999999999999999999985 54322321 1 1122 457
Q ss_pred EEEECCCccCc--cccEEEEEEeCC
Q 016668 307 VVTTTTHKSLR--GPRGGMIFFKKD 329 (385)
Q Consensus 307 iv~~S~hK~l~--GprgG~I~~~~~ 329 (385)
++++ .|.|. |.+.|+++++++
T Consensus 262 i~t~--~K~l~~~G~pigav~~~~~ 284 (425)
T PRK09264 262 IVTL--SKSISGYGLPMALVLIKPE 284 (425)
T ss_pred EEEe--ccccCCCccceEEEEEchh
Confidence 7766 49984 446688888763
No 324
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.81 E-value=1e-06 Score=89.71 Aligned_cols=238 Identities=13% Similarity=0.001 Sum_probs=122.8
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
.+|.|.+++...+..- . +..... ..++ ...+ ..+++.+++.... +...++.+|||+|+.+++... ...
T Consensus 50 ~~p~v~~a~~~ql~~~-~--~~~~~~-~~~~---~~~~-la~~l~~~~p~~~--~~~v~f~~sGseA~e~AlklAr~~tg 119 (420)
T TIGR00700 50 SHPRVVDAVRTQVAEF-T--HTCFMV-TPYE---GYVA-LAEKLNRIAPGSG--PKKSVFFNSGAEAVENAVKIARSYTG 119 (420)
T ss_pred CCHHHHHHHHHHHHhc-c--Cccccc-cCCh---HHHH-HHHHHHHhCCCCC--CCEEEEeCCcHHHHHHHHHHHHHhcC
Confidence 3688888888776532 1 111000 1122 1222 3455667664211 112466789999999988644 233
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc-------------ceEEEEeccccCCC--------CCCCHHHHHHHhh--
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDEST--------GLVDYDMLEKTAI-- 248 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~~~~~~--------~~iD~d~le~~i~-- 248 (385)
..+|+...-.| ||+-.. .++..+ -.+..++++..... ..-+++.+++.+.
T Consensus 120 r~~ii~~~~~y-----HG~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (420)
T TIGR00700 120 RPGVVAFDHGF-----HGRTNM--TMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID 192 (420)
T ss_pred CCcEEEECCCc-----CCCcHH--HHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh
Confidence 45677665332 332100 011111 01122232210000 0012456666653
Q ss_pred --hcCCcEEEEcCC--CCCCC----CCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-
Q 016668 249 --LFRPKLIIAGAS--AYPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL- 316 (385)
Q Consensus 249 --~~~pklIi~~~s--~~~~~----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l- 316 (385)
..+...||+.+- ..+.. ..+++|+++|+++|+++|.|+.+ .|+...|... ..++ ..|+++ ++|.+
T Consensus 193 ~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tg~gr~g~~~a~~~~~~~pDi~~--lsK~l~ 269 (420)
T TIGR00700 193 VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQ-TGFARTGAMFACEHEGPEPDLIT--TAKSLA 269 (420)
T ss_pred cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecc-cCCcccchhHHHhhcCCCCCEEE--eecccc
Confidence 123456777542 12222 22899999999999999999997 5654444211 1122 457665 67998
Q ss_pred ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 317 ~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
+|++.|++++++ ++.+.+.......+.++. +...++..++++.+.++++.+..++
T Consensus 270 ~G~pig~v~~~~------~i~~~~~~~~~~~T~~~~-pl~~aaa~a~l~~l~~~~~~~~~~~ 324 (420)
T TIGR00700 270 DGLPLSGVTGRA------EIMDAPAPGGLGGTYAGN-PLACAAALAVLAIIESEGLIERARQ 324 (420)
T ss_pred CCcceEEEEecH------HHHhhcCCCCcCCCCCcC-HHHHHHHHHHHHHHHhccHHHHHHH
Confidence 567889999987 576666543333334433 3344444446665555555444433
No 325
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.80 E-value=5.4e-07 Score=92.03 Aligned_cols=237 Identities=18% Similarity=0.122 Sum_probs=125.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-+|.|.+++...+..- ..-... .+ .++ ... ...+++.+++.-...+ ..++.+|||+|+.+++... ...
T Consensus 57 ~~p~v~~ai~~ql~~l-~~~~~~--~~-~~~---~~~-~la~~l~~~~p~~~~~--~v~f~~SGseA~e~AlklAr~~tg 126 (425)
T PRK07495 57 RHPRVIAAVKAQLDRF-THTCHQ--VV-PYE---NYV-RLAERLNALVPGDFAK--KTIFVTTGAEAVENAVKIARAATG 126 (425)
T ss_pred CCHHHHHHHHHHHhhc-cCcccC--cc-CCH---HHH-HHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhC
Confidence 3678888887766532 110000 01 122 122 2455677777532111 2456789999999988754 233
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc-------------ceEEEEeccccCCCCC---CCHHHHHHHhhh----cC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDESTGL---VDYDMLEKTAIL----FR 251 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~~~~~~~~---iD~d~le~~i~~----~~ 251 (385)
..+|+...-.| ||+-.. .....+ ..+..++++.+. .+. -+++++++.++. .+
T Consensus 127 r~~ii~~~~~y-----HG~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~~~~~~ 198 (425)
T PRK07495 127 RSAVIAFGGGF-----HGRTFM--GMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKADVDPQR 198 (425)
T ss_pred CCeEEEECCCc-----CCccHH--HhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhccCCCc
Confidence 45777765433 222100 000000 112334443221 111 124555766542 34
Q ss_pred CcEEEEcCCC--CCCC----CCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccE
Q 016668 252 PKLIIAGASA--YPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (385)
Q Consensus 252 pklIi~~~s~--~~~~----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~Gprg 321 (385)
+.+|++.+.. .+.. .-+++|+++|+++|+++|.|++|. |+...|... ..++ ..|+ .++.|.+ .|.+.
T Consensus 199 iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~a~~~~gv~pDi--~tlsK~l~~G~pi 275 (425)
T PRK07495 199 VAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT-GFARTGKLFAMEHHEVAADL--TTMAKGLAGGFPL 275 (425)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-cCCcCCCceeecccCCCCCE--EeehhhhcCCccc
Confidence 6677776432 2211 238899999999999999999984 664444321 1111 2455 4557998 45678
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
|++++++ ++.+.+.......+.++ ++...++..++++.+.++++.+..++
T Consensus 276 gav~~~~------~i~~~~~~~~~~~T~~~-~pl~~aaa~a~l~~l~~~~l~~~~~~ 325 (425)
T PRK07495 276 AAVTGRA------EIMDAPGPGGLGGTYGG-NPLGIAAAHAVLDVIEEEDLCERANQ 325 (425)
T ss_pred eEEEEcH------HHHhccCCCCcCCCCCC-CHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 8888887 56666544333333433 33445544557777766666544443
No 326
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.80 E-value=8.7e-07 Score=91.02 Aligned_cols=231 Identities=16% Similarity=0.082 Sum_probs=119.1
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
+|.|.+++...+.. ... ....++ .++ .+..+.+++.+++.....+ ...+++|||+|+.+++... ....
T Consensus 60 ~p~v~~Ai~~ql~~-~~~--~~~~~~-~~~----~~~~lae~L~~~~p~~~~~--~v~f~~SGseA~e~AiklAr~~tgr 129 (445)
T PRK08593 60 PPRVVEAIKAQADK-FIH--YTPAYM-YHE----PLVRLAKKLCELAPGDFEK--RVTFGLSGSDANDGIIKFARAYTGR 129 (445)
T ss_pred CHHHHHHHHHHHHh-ccC--cccccc-CCH----HHHHHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHhhCC
Confidence 68888888777643 211 111111 223 2222455677777433100 2345689999999998743 2223
Q ss_pred CEEeecCCCCCccccCCccccccccccCc-------------ceEEEEeccccCC--CCCCC-------HHHHHHHhhh-
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDES--TGLVD-------YDMLEKTAIL- 249 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~~~~~--~~~iD-------~d~le~~i~~- 249 (385)
.+|+..+-.| ||+... .++..+ ..+..++++-... ....+ ++++++.+..
T Consensus 130 ~~ii~~~~~Y-----HG~t~~--als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (445)
T PRK08593 130 PYIISFTNAY-----HGSTYG--SLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKY 202 (445)
T ss_pred CeEEEECCCc-----CCCcHH--HHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhh
Confidence 5677665332 332100 111111 0122233221000 00111 2445544432
Q ss_pred ---cCCcEEEEcCCC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc
Q 016668 250 ---FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR 317 (385)
Q Consensus 250 ---~~pklIi~~~s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~ 317 (385)
.+..+||+.+.. .+...+ +++|+++|+++|+++|+|++|. |+.-.|... .-+. ..|+++ +.|.+.
T Consensus 203 ~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~t-g~GrtG~~~a~~~~gv~pDi~t--~gK~l~ 279 (445)
T PRK08593 203 LPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQ-GLGRTGKWSSISHFNITPDLMS--FGKSLA 279 (445)
T ss_pred cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcCchHHHHHhcCCCCCEee--eccccc
Confidence 245677776432 222223 8999999999999999999983 442233211 1122 357664 569985
Q ss_pred -cccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 318 -GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 318 -GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|.++|++++++ ++.+.++......+. +.++...++...+++.+.+++.
T Consensus 280 ~G~p~gav~~~~------~i~~~~~~~~~~~T~-~~~pl~~aaa~a~l~~l~~~~l 328 (445)
T PRK08593 280 GGMPMSAIVGRK------EIMESLEAPAHLFTT-GANPVSCAAALATIDMIEDESL 328 (445)
T ss_pred CCcccEEEEEcH------HHHhhhccCCCCCCC-CCCHHHHHHHHHHHHHHHhccH
Confidence 56788888887 577766432222233 3444556666667777665554
No 327
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.79 E-value=4.9e-07 Score=92.48 Aligned_cols=220 Identities=17% Similarity=0.131 Sum_probs=118.3
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-cCC-
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-KPH- 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all-~pG- 192 (385)
.|.|.+++.+.+..-.. +. .+. ..+....+++.+++.... ...+.+|||+|+..++.... -.|
T Consensus 66 ~p~v~~Ai~~q~~~~~~--------~~-~~~--~~~~~la~~l~~~~p~~~----~v~f~~sGseA~e~AlklAr~~tgr 130 (431)
T PRK06209 66 YPPVVEAVREALQDGCN--------FT-RPS--AIELDAAESFLELIDGAD----MVKFCKNGSDATSAAVRLARAYTGR 130 (431)
T ss_pred CHHHHHHHHHHHHhCcC--------CC-CCC--HHHHHHHHHHHHhCCccc----eEEEecCHHHHHHHHHHHHHHHhCC
Confidence 67777777766653211 11 111 222224556777764211 13567899999999987442 123
Q ss_pred CEEeecCCCCCcccc-----CCccccccccccCcce----EEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCC
Q 016668 193 DRIMGLDLPHGGHLS-----HGFMTPKRRVSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASA 261 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s-----~~~~~~~~~~~~~g~~----~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~ 261 (385)
.+|+... ++++.+ |+.. .. ..+.. .....++ .-|++++++.++.. +..+|++.+ .
T Consensus 131 ~~i~~~~--~~~~h~~~~~~~g~~----~~-~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~Ep-v 196 (431)
T PRK06209 131 DLVARCA--DHPFFSTDDWFIGTT----PM-SAGIPASVSALTVTFR------YNDIASLEALFEDHPGRIACVILEP-A 196 (431)
T ss_pred CeEEEec--cCccccccccccccC----CC-CCCCChhHhccccccC------CCCHHHHHHHHHhCCCCEEEEEEcc-c
Confidence 4555431 111110 1110 00 00100 0011111 34889999888542 345666653 3
Q ss_pred CCC---CCCHHHHHHHHHHcCcEEEEeccccccccccCc-ccCCCC-CCcEEEECCCccCcc-ccEEEEEEeCCCCchhH
Q 016668 262 YPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 262 ~~~---~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~~~~~~ 335 (385)
.+. ...+++|+++|+++|+++|+|++| .|+...+. ....+. ..|+++ +.|.+.| ..+|.+++++ +
T Consensus 197 ~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-tG~~~~~~g~~~~~gv~PDi~t--~gK~lggG~p~~av~~~~------~ 267 (431)
T PRK06209 197 TADEPQDGFLHEVRRLCHENGALFILDEMI-TGFRWHMRGAQKLYGIVPDLSC--FGKALGNGFAVSALAGKR------E 267 (431)
T ss_pred cCCCCCHHHHHHHHHHHHHcCCEEEEEccc-ccCCcCcchhhHHhCCCcceee--ehhhhcCCcccEEEEEHH------H
Confidence 332 334899999999999999999999 67643211 111122 357754 5699954 4577788877 4
Q ss_pred HHHH--Hh----hccC-CCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 336 LESA--IN----NAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 336 ~~~~--i~----~~~f-p~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+.+. +. ...| .+..-++++..+++..++++.+.+++.
T Consensus 268 i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~ 311 (431)
T PRK06209 268 YMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDV 311 (431)
T ss_pred HHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCH
Confidence 5554 21 1111 122224556667777778888776654
No 328
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.78 E-value=9.4e-07 Score=91.08 Aligned_cols=233 Identities=15% Similarity=0.108 Sum_probs=121.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
-+|.|.+++...+..- .. .. +++ -++ ......+++.+++..+.+ ...++.|||+|+..++....
T Consensus 99 ~~p~v~~Ai~~ql~~l-~~--~~-~~~-~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~t~ 166 (459)
T PRK11522 99 RNPVVVSAVQNQLAKQ-PL--HS-QEL-LDP----LRAMLAKTLAALTPGKLK---YSFFCNSGTESVEAALKLAKAYQS 166 (459)
T ss_pred CCHHHHHHHHHHHhhC-cc--cc-ccc-CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCchHHHHHHHHHHHHHhc
Confidence 3799999998877532 11 11 111 122 222345567777643322 23556799999999987442
Q ss_pred cCC-CEEeecCCCCCccccCCccccccccccCcceEEEEec-cccCCC---CCCCHHHHHHHhhh-----cCCcEEEEcC
Q 016668 190 KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDEST---GLVDYDMLEKTAIL-----FRPKLIIAGA 259 (385)
Q Consensus 190 ~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~~---~~iD~d~le~~i~~-----~~pklIi~~~ 259 (385)
++| .+|+...-. + ||+-.. .+...+......++ +..+.. ...|.+++++.++. .+...|++.+
T Consensus 167 ~~gr~~ii~~~~~---y--HG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEp 239 (459)
T PRK11522 167 PRGKFTFIATSGA---F--HGKSLG--ALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEP 239 (459)
T ss_pred cCCCcEEEEecCC---C--CCCcHH--HhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEec
Confidence 122 357766532 2 443110 11122210000000 000000 12377888887753 1234666654
Q ss_pred C--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCcc---ccEEEEEEe
Q 016668 260 S--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG---PRGGMIFFK 327 (385)
Q Consensus 260 s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~G---prgG~I~~~ 327 (385)
. ..+...+ +++++++|+++|+++|+|++| .|+--.|.. - .-++ ..|+++ +.|.|.| |-|++ +++
T Consensus 240 v~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~-tG~GRtG~~~a~e~~gv~PDivt--~gK~lggG~~Pigav-~~~ 315 (459)
T PRK11522 240 IQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ-TGMGRTGKMFACEHENVQPDILC--LAKALGGGVMPIGAT-IAT 315 (459)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce-ecCCccchhhhhhccCCCCCEEE--echhhhCCCccceeE-EEc
Confidence 2 2233334 899999999999999999999 465223321 1 1122 358774 4699964 44554 455
Q ss_pred CCCCchhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 328 KDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
+ ++.+.+... .+..+.++ ++...|+..++|+.+.++++.+..
T Consensus 316 ~------~i~~~~~~~~~~~~~T~~g-np~~~Aaala~L~~i~~~~l~~~~ 359 (459)
T PRK11522 316 E------EVFSVLFDNPFLHTTTFGG-NPLACAAALATINVLLEQNLPAQA 359 (459)
T ss_pred H------HHHHHhccCCcccCCCCCC-CHHHHHHHHHHHHHHhcchHHHHH
Confidence 5 455544322 12222322 445555555678887776654433
No 329
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=98.76 E-value=2.4e-07 Score=91.98 Aligned_cols=188 Identities=18% Similarity=0.218 Sum_probs=115.0
Q ss_pred CCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHH
Q 016668 165 ENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (385)
Q Consensus 165 ~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~l 243 (385)
+.+| .|..++|. .+++.++..++++||.|++-...+.+-+ ..++..| +.++|++.| ...+|+|.|
T Consensus 122 ~~~w--diiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL--------~s~~a~g--v~~ipv~md--~~Gi~pE~l 187 (472)
T KOG0634|consen 122 YKNW--DIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL--------QSMEALG--VKIIPVKMD--QDGIDPESL 187 (472)
T ss_pred CCCc--eEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH--------HhccccC--ceEEecccc--CCCCCHHHH
Confidence 4567 45556665 5999999999999999999776543322 1234455 467776665 446999999
Q ss_pred HHHhhh--------cCCcEEEEcCC-CCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccC-------------
Q 016668 244 EKTAIL--------FRPKLIIAGAS-AYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAAS------------- 296 (385)
Q Consensus 244 e~~i~~--------~~pklIi~~~s-~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g------------- 296 (385)
++.+.. .+|+++++=++ .|| .... =++|.+||++|+.+++.|+.++. |-...
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~-Lq~~~y~~~~~~~~p~~s 266 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYF-LQMNTYNPSLELESPAHS 266 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccce-eeccccCCCccccCcccc
Confidence 998753 23677765322 233 2333 36899999999999999998653 21110
Q ss_pred -------cccCCCC-CCc--E-EEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHH
Q 016668 297 -------VVADPFK-YCD--V-VTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCL 364 (385)
Q Consensus 297 -------~~~~p~~-gaD--i-v~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al 364 (385)
..++.+. ..| | -.-||+|-+ +|.|-||+.+++. +.+++-...--.+++ |+...-.-+...|
T Consensus 267 ~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~------~l~ril~~ae~~t~~-pSg~sq~iv~a~l 339 (472)
T KOG0634|consen 267 SSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL------FLKRILDLAEVATSG-PSGFSQGIVYAML 339 (472)
T ss_pred HHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH------HHHHHhhhcceeecC-cccccHHHHHHHH
Confidence 1222222 222 3 467999987 7889999999984 444443322222232 4433333334444
Q ss_pred HHhhCchHHH
Q 016668 365 KHAQSPEFKV 374 (385)
Q Consensus 365 ~e~~~~~~~~ 374 (385)
+..-.++|.+
T Consensus 340 ~~wgqeG~~~ 349 (472)
T KOG0634|consen 340 KRWGQEGFLR 349 (472)
T ss_pred HHHHHHHHHH
Confidence 4444444433
No 330
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.75 E-value=2.4e-06 Score=86.92 Aligned_cols=240 Identities=17% Similarity=0.088 Sum_probs=125.2
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
+|.|.+|+...+..-. + ...++......+ ...+++.+++-.+ .+ ...+.+||++||.+++... ...
T Consensus 74 hP~Vv~Av~~q~~~~~-h--~~~~~~~~e~~v-----~~ae~L~~~~p~~~~~---~~~f~~sGaeA~E~AiKiAr~~Tg 142 (447)
T COG0160 74 HPRVVEAVKRQLAKLN-H--THTRDLYYEPYV-----ELAEKLTALAPGSGLK---KVFFGNSGAEAVEAAIKIARAYTG 142 (447)
T ss_pred CHHHHHHHHHHHHHhh-c--ccCCcccchhHH-----HHHHHHHHhCCcccCC---eEEecCCcHHHHHHHHHHHHHHhC
Confidence 7999999887654321 1 111222111212 1344566666553 22 3466789999999998754 233
Q ss_pred CCEEeecCCCCCccccCCcc--cccccccc-----CcceEEEEeccccCCC---------CCCCHHHHHHHhhh-----c
Q 016668 192 HDRIMGLDLPHGGHLSHGFM--TPKRRVSG-----TSIYFESMPYRLDEST---------GLVDYDMLEKTAIL-----F 250 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~--~~~~~~~~-----~g~~~~~i~~~~~~~~---------~~iD~d~le~~i~~-----~ 250 (385)
+..|+...-.+-|. +++.. +..+.... ....+..+||+..... +.-..+.+++.+.. .
T Consensus 143 r~~viaf~~afHG~-T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~ 221 (447)
T COG0160 143 RPGVIAFDGAFHGR-TLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPE 221 (447)
T ss_pred CCcEEEECCccccc-chhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCC
Confidence 45677665433221 11110 00000010 1112345555432111 01123445554422 2
Q ss_pred CCcEEEEcCC--CCCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCcEEEECCCccCc-cc
Q 016668 251 RPKLIIAGAS--AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLR-GP 319 (385)
Q Consensus 251 ~pklIi~~~s--~~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaDiv~~S~hK~l~-Gp 319 (385)
++..||+.+. .-+. ..-+++++++|++||+++|+|+.| .|+--.|.+ ..++ ..|++|++ |.+. |.
T Consensus 222 ~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQ-tG~GRTG~~-fa~E~~gv~PDivt~a--K~ig~G~ 297 (447)
T COG0160 222 EVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ-TGFGRTGKM-FAFEHFGVEPDIVTLA--KSLGGGL 297 (447)
T ss_pred ceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCccccc-hhhhhcCCCCCEEEec--ccccCCC
Confidence 3556777542 1222 223899999999999999999999 566555533 2333 35888776 9984 45
Q ss_pred cEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 320 RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 320 rgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
..|.+++++ ++.+ .....+.++.+|......+| .+.|+.+.++++.+.+++
T Consensus 298 Pl~avv~r~------ei~~-~~~g~~~~Tf~GNpva~Aaa-~AvL~vie~e~L~~~a~~ 348 (447)
T COG0160 298 PLSAVVGRA------EIMD-WPPGGHGGTFGGNPVACAAA-LAVLDVIEEENLLERAAE 348 (447)
T ss_pred ceeEEeccH------Hhcc-cCCcccCCCCCcCHHHHHHH-HHHHHHHHHccHHHHHHH
Confidence 667788887 3444 22223333444443344444 446776766666544443
No 331
>PRK06105 aminotransferase; Provisional
Probab=98.73 E-value=2.6e-06 Score=87.85 Aligned_cols=232 Identities=13% Similarity=0.051 Sum_probs=120.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
-+|.|.+++.+.+.+ .........+ .++ .+..+.+++.+++..+.+ ...+..|||+|+.+++....
T Consensus 65 ~~p~i~~Ai~~q~~~-~~~~~~~~~~--~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlKlar~~~~ 134 (460)
T PRK06105 65 SEQRLVEAAARQMKK-LPFYHTFSHK--SHG----PVIDLAEKLVAMAPVPMS---KVFFTNSGSEANDTVVKLVWYYNN 134 (460)
T ss_pred CCHHHHHHHHHHHHh-CCCeeccccc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 378899998887754 2111111111 122 222345677788754332 23556899999999987642
Q ss_pred --c-C-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCC---CC-------CCCHHHH
Q 016668 190 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG-------LVDYDML 243 (385)
Q Consensus 190 --~-p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~---~~-------~iD~d~l 243 (385)
. + ..+|+...-.| ||+... .++..+. .+..++++.... .+ ...++++
T Consensus 135 ~~g~t~r~~il~~~~~y-----HG~t~~--a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 207 (460)
T PRK06105 135 ALGRPEKKKIISRQRGY-----HGVTIA--SASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANEL 207 (460)
T ss_pred hcCCCCCcEEEEecCcc-----CCcchh--heeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHH
Confidence 1 2 35677765332 332110 1111111 011122210000 00 0124667
Q ss_pred HHHhhh---cCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEecccc-ccccccCccc--CCCC-CCcEEEE
Q 016668 244 EKTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHI-SGLVAASVVA--DPFK-YCDVVTT 310 (385)
Q Consensus 244 e~~i~~---~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~-~Gli~~g~~~--~p~~-gaDiv~~ 310 (385)
++.+.. .++..||+.+. ..+...+ +++++++|+++|+++|+|+.|+ .|.. |... .-++ ..|++++
T Consensus 208 e~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRt--G~~f~~~~~~v~PDi~~~ 285 (460)
T PRK06105 208 EALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRT--GNMFGCETFGIKPDILVM 285 (460)
T ss_pred HHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcC--chhhhHHhcCCCCCeeee
Confidence 777642 23567777643 2233333 8999999999999999999983 4433 2211 1122 3577755
Q ss_pred CCCccCccc--cEEEEEEeCCCCchhHHHHHHhhc-----c--CCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 311 TTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V--FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 311 S~hK~l~Gp--rgG~I~~~~~~~~~~~~~~~i~~~-----~--fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.|.|.|- ..|.+++++ ++.+.+... . +..+++ .++-..++...+|+.+.++++.
T Consensus 286 --gK~lggG~~P~~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~L~~i~~~~l~ 348 (460)
T PRK06105 286 --SKQLSSSYQPLSAVLMNE------KVYDPIADESGKIGTFGHGFTAS-GHPVAAAVALENLAIIEERDLV 348 (460)
T ss_pred --ecccccCcccceEEEEcH------HHHHHHhcccccCcccccCCCCC-CCHHHHHHHHHHHHHHHhccHH
Confidence 5999552 567777776 566655431 1 112233 3334444444578777766653
No 332
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.72 E-value=2.4e-06 Score=87.34 Aligned_cols=227 Identities=14% Similarity=0.105 Sum_probs=118.5
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
.|.|.+++.+.+......+ ..++ .+....+++.+++.- .+ -..+.+|||+|+..++... ....
T Consensus 71 ~p~v~~ai~~q~~~~~~~~-------~~~~----~~~~la~~l~~~~p~-~~---~v~f~~sGseA~e~AlklAr~~tgr 135 (428)
T PRK12389 71 HPHITKAITEAAENGVLYG-------TPTE----LEIEFAKMLKEAIPS-LE---KVRFVNSGTEAVMTTIRVARAYTGR 135 (428)
T ss_pred CHHHHHHHHHHHHhCCccC-------CCCH----HHHHHHHHHHHhCCC-Cc---EEEEeCCHHHHHHHHHHHHHHhhCC
Confidence 6788888877765321101 1122 222244566666641 11 2356789999999998754 2334
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEE--------EEeccccCCC---CCCCHHHHHHHhhhc--CCcEEEEcC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE--------SMPYRLDEST---GLVDYDMLEKTAILF--RPKLIIAGA 259 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~--------~i~~~~~~~~---~~iD~d~le~~i~~~--~pklIi~~~ 259 (385)
.+|+...-.| ||+... .++..+.... -++-...++. ...|++.+++.++.. ++..|++.+
T Consensus 136 ~~ii~~~~~y-----HG~t~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EP 208 (428)
T PRK12389 136 TKIIKFAGCY-----HGHSDL--VLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEP 208 (428)
T ss_pred CEEEEECCCc-----CCChHH--HHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeC
Confidence 6777765332 332100 0111110000 0000000000 023789998888642 345667654
Q ss_pred C--CCCCCCC----HHHHHHHHHHcCcEEEEecccccccccc-CcccCCCC-CCcEEEECCCccCcc-ccEEEEEEeCCC
Q 016668 260 S--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAA-SVVADPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDP 330 (385)
Q Consensus 260 s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~-g~~~~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~ 330 (385)
. ..+...+ +++|+++|+++|+++|+|+.|. |+... +....-++ ..|+++ +.|.+.| ...|.+++++
T Consensus 209 v~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~t-G~Rt~~~~a~~~~gv~PDivt--~gK~lggG~Pi~av~~~~-- 283 (428)
T PRK12389 209 IVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT-AFRFMYGGAQDLLGVEPDLTA--LGKIIGGGLPIGAYGGRK-- 283 (428)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCcchhhHHhCCCCCeee--echhhcCCCceeEEeEHH--
Confidence 2 2233334 8999999999999999999984 44221 10111122 468764 4699854 3345557776
Q ss_pred CchhHHHHHHhh--ccCC-CccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 331 VLGVELESAINN--AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 331 ~~~~~~~~~i~~--~~fp-~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++.+.+.. ..+. ++.+ .++...|+..++|+.+.++++.
T Consensus 284 ----~i~~~~~~~~~~~~~~T~~-gnpl~~Aaala~L~~l~~~~l~ 324 (428)
T PRK12389 284 ----DIMEQVAPLGPAYQAGTMA-GNPASMAAGIACLEVLQQEGVY 324 (428)
T ss_pred ----HHHhhhccCCCcccccCCc-cCHHHHHHHHHHHHHHhcccHH
Confidence 56666642 1122 2223 3444455555677777665553
No 333
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.70 E-value=1.5e-06 Score=88.77 Aligned_cols=237 Identities=15% Similarity=0.040 Sum_probs=124.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
-+|.|.+++...+.+ ....... ...++ ......+++.+++....+ ...+..|||+|+.+++....
T Consensus 60 ~~p~i~~Ai~~q~~~-~~~~~~~---~~~~~----~~~~la~~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~~~ 128 (428)
T PRK07986 60 NHPQLNAAMKSQIDA-MSHVMFG---GITHP----PAIELCRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQ 128 (428)
T ss_pred CCHHHHHHHHHHHhh-cCCcccc---ccCCH----HHHHHHHHHHhhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 368888888777643 2111111 00122 122234567777653322 23567889999999887442
Q ss_pred ---cCCCEEeecCCCCCccccCCccccccccccCcc-------------eEEEEeccccCCC---CCCCHHHHHHHhhhc
Q 016668 190 ---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAILF 250 (385)
Q Consensus 190 ---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~i~~~~~~~~---~~iD~d~le~~i~~~ 250 (385)
....+|+...-.| ||.... .++..+. .+..++++..... ..-|++++++.++..
T Consensus 129 ~~g~~r~kii~~~~~y-----HG~t~~--a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~ 201 (428)
T PRK07986 129 AKGEPRQRFLTLRHGY-----HGDTFG--AMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH 201 (428)
T ss_pred hcCCCCcEEEEECCCc-----CCCcHh--hhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC
Confidence 2346788876433 332100 1111110 0111222110000 023667888877532
Q ss_pred --CCcEEEEcCC--CC-CC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCcc
Q 016668 251 --RPKLIIAGAS--AY-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG 318 (385)
Q Consensus 251 --~pklIi~~~s--~~-~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~G 318 (385)
+..+|++.+. .. +. ...+++|+++|+++|+++|+|++| .|+.-.|... .-+. ..|+++ +.|.|.|
T Consensus 202 ~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~-tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~g 278 (428)
T PRK07986 202 RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIA-TGFGRTGKLFACEHAGIAPDILC--LGKALTG 278 (428)
T ss_pred CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCCeeeecccCCCCCEEE--echhhhC
Confidence 2346666542 22 22 123899999999999999999999 6653233211 1122 357775 6799843
Q ss_pred c--cEEEEEEeCCCCchhHHHHHHhhcc-----CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 319 P--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 319 p--rgG~I~~~~~~~~~~~~~~~i~~~~-----fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
- ..|.+++++ ++.+.+.... ...+++ .++...++..++|+.+.++++.+..++
T Consensus 279 G~~p~~av~~~~------~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~L~~i~~~~~~~~~~~ 338 (428)
T PRK07986 279 GTMTLSATLTTR------EVAETISNGEAGCFMHGPTFM-GNPLACAVANASLSLLESGDWQQQVAA 338 (428)
T ss_pred CcccCcchhchH------HHHHHhhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 2 445556666 5666664421 122333 345566666667887776666444443
No 334
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.68 E-value=2.1e-06 Score=87.80 Aligned_cols=233 Identities=12% Similarity=0.028 Sum_probs=124.0
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~-- 190 (385)
.-+|.|.+++...+. +....... .+.. + ... .+.+++.++++-..+ ...++.||++|+..++.....
T Consensus 61 h~~p~v~~ai~~~~~-~~~~~~~~--~~~~-~---~~~-~la~~l~~~~~~~~~---~v~f~~sGseA~e~AlklAr~~~ 129 (427)
T TIGR00508 61 YNHPRLNAAAQKQID-KMSHVMFG--GFTH-K---PAI-ELCQKLVKMTPNALD---CVFLADSGSVAVEVALKMALQYW 129 (427)
T ss_pred CCCHHHHHHHHHHHH-hcCCcccc--ccCC-H---HHH-HHHHHHHhhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 446888888877654 33211111 0111 1 112 234566777754322 245677999999988875431
Q ss_pred -----C-CCEEeecCCCCCccccCCccccccccccCcc-------------eEEEEeccccCCC---CCCCHHHHHHHhh
Q 016668 191 -----P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDEST---GLVDYDMLEKTAI 248 (385)
Q Consensus 191 -----p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~i~~~~~~~~---~~iD~d~le~~i~ 248 (385)
+ ..+|+..+-.| ||.... .....+. .....+++..... ..-|++++++.+.
T Consensus 130 ~~~~~~~r~~il~~~~~y-----HG~t~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~ 202 (427)
T TIGR00508 130 QAKGEKNRQKFLTIRSGY-----HGDTFG--AMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLME 202 (427)
T ss_pred HhhCCCCccEEEEEcCCc-----CCccHh--hhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHH
Confidence 2 35788776443 222100 0111110 0011121111000 0125677777775
Q ss_pred hc--CCcEEEEcC--CCCC-----CCCCHHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEECCCccC
Q 016668 249 LF--RPKLIIAGA--SAYP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL 316 (385)
Q Consensus 249 ~~--~pklIi~~~--s~~~-----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S~hK~l 316 (385)
.. +...|++.+ +..+ ...++++|+++|+++|+++|+|++| .|+...|.. ..-++ ..|+++ +.|.|
T Consensus 203 ~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~-tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l 279 (427)
T TIGR00508 203 LHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIA-TGFGRTGKLFACEHAGVVPDILC--VGKAL 279 (427)
T ss_pred hcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCCccchhhhcCCCCCEEE--echhh
Confidence 32 345677764 2222 2346899999999999999999999 665333432 11122 467776 57998
Q ss_pred ccc--cEEEEEEeCCCCchhHHHHHHhhcc-----CCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 317 RGP--RGGMIFFKKDPVLGVELESAINNAV-----FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 317 ~Gp--rgG~I~~~~~~~~~~~~~~~i~~~~-----fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.|- ..+.+++++ ++.+.++... +...++ .++..+++...+++.+.++++.
T Consensus 280 ~gG~~p~~a~~~~~------~~~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~l~~~~~~ 336 (427)
T TIGR00508 280 TGGYMTLSATVTTD------KVAQTISSGEAGCFMHGPTFM-GNPLACAVAEASLAILLEGEWQ 336 (427)
T ss_pred hcCcccceEEEEcH------HHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhCCHH
Confidence 432 456667766 5777665421 122222 2455566666678777666653
No 335
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.68 E-value=2.4e-06 Score=87.90 Aligned_cols=236 Identities=15% Similarity=0.086 Sum_probs=122.2
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-+|.|.+++...+.+....+.. .+ -++ .+....+++.+++.....+ ...+++|||+|+.+++... ...
T Consensus 71 ~~p~v~~ai~~q~~~~~~~~~~--~~--~~~----~~~~la~~L~~~~p~~~~~--~v~f~~sGseA~e~AlklAr~~tg 140 (451)
T PRK06918 71 SHPKVKEALHKQVDQYIHTGFN--VM--MYE----PYIELAEKLAALAPGSFDK--KVLFLNSGAEAVENAVKIARKYTK 140 (451)
T ss_pred CCHHHHHHHHHHHHhccCcccc--cc--ccH----HHHHHHHHHHHhCCCCCCC--EEEEcCCcHHHHHHHHHHHHHHhC
Confidence 3788999988777542111110 01 122 2233456677877533211 2356789999999998754 233
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcc-------------eEEEEeccccC--CCCCCC-------HHHHHHHhh-
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVD-------YDMLEKTAI- 248 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~i~~~~~~--~~~~iD-------~d~le~~i~- 248 (385)
..+|+...-.| ||+-.. .++..+. .+..++++... ..+..+ ++.+++.+.
T Consensus 141 r~~ii~~~~~y-----HG~t~~--~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (451)
T PRK06918 141 RQGIISFSRGF-----HGRTLM--TMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS 213 (451)
T ss_pred CCcEEEECCCc-----Cccchh--hhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh
Confidence 45677665332 332110 0111110 01222322100 001100 123444331
Q ss_pred ---hcCCcEEEEcCCC--CC----CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCcEEEECCCcc
Q 016668 249 ---LFRPKLIIAGASA--YP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKS 315 (385)
Q Consensus 249 ---~~~pklIi~~~s~--~~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaDiv~~S~hK~ 315 (385)
..+.-.|++.+.. .+ ....+++|+++|+++|+++|.|+.+ .|+...|... +++ ..|++ |++|.
T Consensus 214 ~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~-tg~gr~g~~~-a~~~~~v~pDi~--t~sK~ 289 (451)
T PRK06918 214 EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ-TGFARTGKYF-AIEHFDVVPDLI--TVSKS 289 (451)
T ss_pred hcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cCcCccCcee-hhHhcCCCCCEE--eeehh
Confidence 1234566665421 12 1223899999999999999999997 5654444321 222 25655 67899
Q ss_pred C-ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 316 L-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 316 l-~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
+ +|.+.|++++++ ++.+.+.........++...... +...+++.+.++++.+..+
T Consensus 290 l~~G~pig~v~~~~------~i~~~~~~~~~~~T~~g~~l~~a-aa~a~l~~i~~~~~~~~~~ 345 (451)
T PRK06918 290 LGAGVPISGVIGRK------EIMDESAPGELGGTYAGSPLGCA-AALAVLDIIEKENLNDRAI 345 (451)
T ss_pred hcCCCccEEEEEcH------HHHhccCCCCcCcCCCcCHHHHH-HHHHHHHHHHHCCHHHHHH
Confidence 8 567889999987 57666654333333443333333 3344666665656544443
No 336
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.68 E-value=3.7e-06 Score=86.37 Aligned_cols=233 Identities=19% Similarity=0.131 Sum_probs=119.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
-+|.|.+++.+.+.+ ...... +...++ ...+ ..+++.+++....+ ...+.+|||+|+..++....
T Consensus 66 ~~p~v~~ai~~ql~~-l~~~~~---~~~~~~---~~~~-la~~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 134 (445)
T PRK09221 66 GRPEIVEAVARQAAT-LDYAPA---FQMGHP---LAFE-LAERLAELAPGGLD---HVFFTNSGSESVDTALKIALAYHR 134 (445)
T ss_pred CCHHHHHHHHHHHHh-ccCccc---cccCCH---HHHH-HHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 478888888877653 221111 111233 1222 44567777743221 23567899999999886442
Q ss_pred --c-C-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCCC--C--------CCCHHHH
Q 016668 190 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--G--------LVDYDML 243 (385)
Q Consensus 190 --~-p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~~--~--------~iD~d~l 243 (385)
. + ..+|+...-.| ||... ..++..|. .+..++++.+... . .-+.+++
T Consensus 135 ~~g~~~r~~ii~~~~~y-----HG~t~--gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (445)
T PRK09221 135 ARGQGTRTRLIGRERGY-----HGVGF--GGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDL 207 (445)
T ss_pred hcCCCCCcEEEEECCCc-----Cccch--hhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHH
Confidence 1 1 35787766432 33210 00111110 1122232210000 0 0113577
Q ss_pred HHHhhhc---CCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEEC
Q 016668 244 EKTAILF---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTT 311 (385)
Q Consensus 244 e~~i~~~---~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S 311 (385)
++.++.. +...|++.+. ..+...+ +++|+++|+++|+++|+|++|+ |+.-.|.. ..-++ ..|++++
T Consensus 208 ~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~~~~~~gv~PDi~~~- 285 (445)
T PRK09221 208 ERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVIT-GFGRLGAAFAAERFGVTPDIITF- 285 (445)
T ss_pred HHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCCcCchhhHHHhcCCCCCEEEe-
Confidence 7777532 3456777642 2234444 8999999999999999999984 54222221 11122 3477755
Q ss_pred CCccCcc--ccEEEEEEeCCCCchhHHHHHHhhc------cC-CCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA------VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 312 ~hK~l~G--prgG~I~~~~~~~~~~~~~~~i~~~------~f-p~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
.|.+.| ...|.+++++ ++.+.+... .+ ..+.++ ++..+++...+|+.+.+++..+
T Consensus 286 -gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~~-~pl~~aaa~a~L~~i~~~~l~~ 349 (445)
T PRK09221 286 -AKGLTNGAIPMGAVIASD------EIYDAFMQGPEYAIEFFHGYTYSA-HPVACAAGLATLDIYREEDLFE 349 (445)
T ss_pred -ccccccCcccceeeEEcH------HHHHhhccCcccccccccccCCCc-CHHHHHHHHHHHHHHHhccHHH
Confidence 588853 3456677776 565555321 11 123333 3444555456787776666543
No 337
>PRK06541 hypothetical protein; Provisional
Probab=98.67 E-value=3.7e-06 Score=86.72 Aligned_cols=232 Identities=16% Similarity=0.069 Sum_probs=116.2
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~---- 190 (385)
+|.|.+++...+.. ...... ..+ .++ ....+.+++.+++..+.+ ...+++|||+|+.+++.....
T Consensus 70 ~p~v~~Av~~q~~~-~~~~~~-~~~--~~~----~~~~la~~l~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~~ 138 (460)
T PRK06541 70 RAELAEAAAKQAGT-LAFFPL-WSY--AHP----PAIELAERLAALAPGDLN---RVFFTTGGSEAVESAWKLAKQYFKL 138 (460)
T ss_pred CHHHHHHHHHHHhh-CcCccc-ccc--CCH----HHHHHHHHHHHhCCCCcC---EEEEcCCcHHHHHHHHHHHHHHHHh
Confidence 68888888777643 211111 011 222 222244567777643322 235678999999998864321
Q ss_pred ----CCCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCC-C-CCCC--------HHHHH
Q 016668 191 ----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-T-GLVD--------YDMLE 244 (385)
Q Consensus 191 ----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~-~-~~iD--------~d~le 244 (385)
...+|+...-.| ||.... .++..+. .+..++++.... . ..-| ++.++
T Consensus 139 ~g~~~r~~ii~~~~~y-----HG~t~~--a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 211 (460)
T PRK06541 139 TGKPGKHKVISRAIAY-----HGTTQG--ALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIE 211 (460)
T ss_pred cCCCCccEEEEEcCcc-----cCcchh--hhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHH
Confidence 246787766432 332100 0111110 011222211000 0 0011 36677
Q ss_pred HHhhh---cCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccc-cccccccCcccCCCC-CCcEEEECCC
Q 016668 245 KTAIL---FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTTTH 313 (385)
Q Consensus 245 ~~i~~---~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah-~~Gli~~g~~~~p~~-gaDiv~~S~h 313 (385)
+.++. .+..+|++.+- ..+...+ +++|+++|+++|+++|+|++| +.|-........-++ ..|+++ +.
T Consensus 212 ~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~g 289 (460)
T PRK06541 212 EAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CA 289 (460)
T ss_pred HHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ec
Confidence 77753 23445666542 1233334 899999999999999999998 344321110011122 358775 67
Q ss_pred ccCc-cc-cEEEEEEeCCCCchhHHHHHHhhc--cC-CCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 314 KSLR-GP-RGGMIFFKKDPVLGVELESAINNA--VF-PGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 314 K~l~-Gp-rgG~I~~~~~~~~~~~~~~~i~~~--~f-p~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|.+. |. +.|.+++++ ++.+.+... .+ .+.+-+.++...++...+++.+.++++
T Consensus 290 K~l~~G~~pigav~~~~------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~ 347 (460)
T PRK06541 290 KGITSGYSPLGAMIASD------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGL 347 (460)
T ss_pred ccccCCccceeEEEEcH------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 9985 43 456666666 455555432 11 111222344445555556766655554
No 338
>PRK06062 hypothetical protein; Provisional
Probab=98.66 E-value=3.6e-06 Score=86.59 Aligned_cols=232 Identities=12% Similarity=0.050 Sum_probs=121.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-.|.|.+++...+.. .....+ . + .++ ......+++.+++....+ ...+.+|||+|+..++... ...
T Consensus 70 ~~p~v~~Ai~~q~~~-~~~~~~--~-~-~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGsEAve~AlklAr~~tg 137 (451)
T PRK06062 70 QHPKVVAAIQEQAAR-LCTVAP--A-H-AND----ARSEAARLIAERAPGDLS---KVFFTNGGADANEHAVRMARLHTG 137 (451)
T ss_pred CCHHHHHHHHHHHHh-cCCcCC--c-c-CCH----HHHHHHHHHHHhCCCCCC---EEEEcCChHHHHHHHHHHHHHhhC
Confidence 368888888877643 221111 1 1 122 222244567777643221 2356789999999998754 223
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcc-----------eEEEEeccccCC-CC--CCC-------HHHHHHHhhhc
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRLDES-TG--LVD-------YDMLEKTAILF 250 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-----------~~~~i~~~~~~~-~~--~iD-------~d~le~~i~~~ 250 (385)
..+|+...-.| ||+... .++..+. .+...+++.... .. .-| ++.++++++..
T Consensus 138 r~~ii~~~~~y-----HG~t~~--als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~ 210 (451)
T PRK06062 138 RPKVLSAYRSY-----HGGTGS--AINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELE 210 (451)
T ss_pred CceEEEEeCCC-----CCCCHH--HHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhc
Confidence 46777765332 333100 1111110 011111110000 00 012 67788877532
Q ss_pred ---CCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEECCCccCcc
Q 016668 251 ---RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG 318 (385)
Q Consensus 251 ---~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S~hK~l~G 318 (385)
++..|++.+. ..+...+ +++|+++|+++|++||+|++|+ |+.-.|.. ..-+. ..|++++ .|.|.|
T Consensus 211 ~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~t-GfGRtG~~~a~~~~gv~PDi~t~--gK~lgg 287 (451)
T PRK06062 211 GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMA-GFGRTGKWFAIEHFGVVPDLITF--AKGVNS 287 (451)
T ss_pred CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeecccc-CCCcCcHHHHHHhcCCCCCeeee--chhhhc
Confidence 3456777642 1233334 8999999999999999999985 54222221 11122 4587754 699965
Q ss_pred --ccEEEEEEeCCCCchhHHHHHHhhccC-C-CccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 319 --PRGGMIFFKKDPVLGVELESAINNAVF-P-GLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 319 --prgG~I~~~~~~~~~~~~~~~i~~~~f-p-~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
...|.+++++ ++.+.+....+ . .++++ ++...|+..++|+.+.++++.+
T Consensus 288 G~~Pigav~~~~------~i~~~~~~~~~~~~~T~~g-npl~~Aaa~a~L~~l~~~~l~~ 340 (451)
T PRK06062 288 GYVPLGGVAISE------AIAATFADRPYPGGLTYSG-HPLACAAAVATINAMEEEGIVE 340 (451)
T ss_pred CCcCcEEEEEcH------HHHHHhccCCCCCCCCCCC-CHHHHHHHHHHHHHHHhcCHHH
Confidence 1344455555 46666543322 2 23333 4556666666887776666543
No 339
>PRK07482 hypothetical protein; Provisional
Probab=98.62 E-value=3.6e-06 Score=86.90 Aligned_cols=238 Identities=16% Similarity=0.035 Sum_probs=122.2
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
-+|.|.+++...+..- ....+...+ .++ .+....+++.+++..+.+ ...+.+|||+|+.+++....
T Consensus 67 ~~p~v~~Av~~q~~~~-~~~~~~~~~--~~~----~~~~lAe~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~ 136 (461)
T PRK07482 67 GRTEVAEAIAEQAKEL-AYYHTYVGH--GTE----ASITLSKRIIDRAPAGMS---KVYYGLSGSDANETQIKLVWYYNN 136 (461)
T ss_pred CCHHHHHHHHHHHHhc-Ccccccccc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 3788888888776532 111110001 122 222245567777743221 23567899999999887552
Q ss_pred --c-C-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCC---CC-------CCCHHHH
Q 016668 190 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG-------LVDYDML 243 (385)
Q Consensus 190 --~-p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~---~~-------~iD~d~l 243 (385)
. + ..+|+...-.| ||.-. ...+..+. .+..++++.... .+ .-|++.+
T Consensus 137 ~~g~~~r~~Ii~~~~~Y-----HG~t~--ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 209 (461)
T PRK07482 137 VLGRPEKKKIISRWRGY-----HGSGV--VTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADEL 209 (461)
T ss_pred hcCCCCCceEEEecCcc-----CCccH--hhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHH
Confidence 1 2 35788766433 33210 00111110 011122111000 00 1146778
Q ss_pred HHHhhh---cCCcEEEEcCCC--CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEEC
Q 016668 244 EKTAIL---FRPKLIIAGASA--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTT 311 (385)
Q Consensus 244 e~~i~~---~~pklIi~~~s~--~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S 311 (385)
++.+.. .+...||+.+.. .+. ..-+++|+++|+++|+++|.|+.+ .|+--.|.. ..-++ ..|+++++
T Consensus 210 ~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~g 288 (461)
T PRK07482 210 EELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVV-TGFGRLGSMFGSDHYGIEPDLITVA 288 (461)
T ss_pred HHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccc-cCCCcCcchhhHHhcCCCCCEEEEc
Confidence 887742 234567776431 121 223899999999999999999997 454212211 11122 46888864
Q ss_pred CCccCcc--ccEEEEEEeCCCCchhHHHHHHhhc-----c-CC-CccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 312 THKSLRG--PRGGMIFFKKDPVLGVELESAINNA-----V-FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 312 ~hK~l~G--prgG~I~~~~~~~~~~~~~~~i~~~-----~-fp-~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
|.+.| ...|.+++++ ++.+.+... . .. +++ +.++-..|+..++|+.+.++++.+.+++
T Consensus 289 --Kgl~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~-~gnpl~~Aaa~a~L~~~~~~~l~~~~~~ 355 (461)
T PRK07482 289 --KGLTSAYAPLSGSIVGE------KVWDVLEQGSDEHGAIGHGWTY-SGHPICAAAALANLDILERENLVGNAAE 355 (461)
T ss_pred --cccccCccccceeeecH------HHHHHHhcccccCCccccCCCC-CcCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99854 2445566665 465555421 1 11 222 2344556665667887777776555443
No 340
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=98.60 E-value=5.8e-07 Score=88.19 Aligned_cols=202 Identities=19% Similarity=0.207 Sum_probs=123.2
Q ss_pred ccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHH
Q 016668 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEV 184 (385)
Q Consensus 106 ~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a 184 (385)
+|..+.+++.+.+..| ...|..-. |..|+ |....-+.-+++..++.+.+.=| .+++|. +|..++| |.|+..+
T Consensus 80 ~lLd~~~fp~Dai~RA-~~~L~~~g--Gs~Ga--YS~SqGv~~vR~~VA~~I~rRDG-~p~~p~-dI~LT~GAS~ai~~i 152 (475)
T KOG0258|consen 80 ELLDSPEFPTDAIKRA-KRILNDCG--GSLGA--YSDSQGVPGVRKHVAEFIERRDG-IPADPE-DIFLTTGASPAIRSI 152 (475)
T ss_pred hhcCCCCCCHHHHHHH-HHHHHhcC--Ccccc--cccccCChhHHHHHHHHHHhccC-CCCCHH-HeeecCCCcHHHHHH
Confidence 4445666666665555 33443322 22221 22222233566666777777778 555674 4555655 5688887
Q ss_pred HHHhc-cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhh----cCCcEEEEc
Q 016668 185 YTAIL-KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAIL----FRPKLIIAG 258 (385)
Q Consensus 185 ~~all-~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~----~~pklIi~~ 258 (385)
+.-++ .++|-||++-|.|. .|. ..++..|. ..++|-+|++ +|.+|.++|++.+.+ .+|+++++=
T Consensus 153 l~l~~~~~~~GvliPiPQYP---LYs-----Ati~l~~~--~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvI 222 (475)
T KOG0258|consen 153 LSLLIAGKKTGVLIPIPQYP---LYS-----ATISLLGG--TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVI 222 (475)
T ss_pred HHHHhcCCCCceEeecCCCc---hhH-----HHHHHhCC--cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEE
Confidence 77764 68899999988653 222 13445554 3556667766 468999999988754 357765544
Q ss_pred CCCCCC-----CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC-------C--CCc-E---EEECCCccC---c
Q 016668 259 ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-------K--YCD-V---VTTTTHKSL---R 317 (385)
Q Consensus 259 ~s~~~~-----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~-------~--gaD-i---v~~S~hK~l---~ 317 (385)
.|.||+ ...+++|.++|.+.|++|+.|+.+---+...+.....| . +.| + .+.|+||.+ .
T Consensus 223 NPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gEC 302 (475)
T KOG0258|consen 223 NPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGEC 302 (475)
T ss_pred CCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeee
Confidence 455553 45799999999999999999997532222222100011 1 333 3 456777887 6
Q ss_pred cccEEEE
Q 016668 318 GPRGGMI 324 (385)
Q Consensus 318 GprgG~I 324 (385)
|.|||.+
T Consensus 303 G~RGGYm 309 (475)
T KOG0258|consen 303 GQRGGYM 309 (475)
T ss_pred cccCCee
Confidence 7899875
No 341
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.59 E-value=4.1e-06 Score=85.46 Aligned_cols=125 Identities=14% Similarity=0.037 Sum_probs=75.3
Q ss_pred HHHHHHhhhcCCcEEEEcCC--C-C----CCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEE
Q 016668 241 DMLEKTAILFRPKLIIAGAS--A-Y----PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (385)
Q Consensus 241 d~le~~i~~~~pklIi~~~s--~-~----~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~ 310 (385)
+.+++.+. .+...||+.+. . . +....+++|+++|+++|+++|+|++| .|+.-.|... ..++ ..|++
T Consensus 191 ~~~~~~~~-~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDi~-- 266 (422)
T PRK05630 191 RSLELLID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIA-TGFGRTGELFATLAAGVTPDIM-- 266 (422)
T ss_pred HHHHHHHh-hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecce-eCCCcCchhhHHHhcCCCCCee--
Confidence 34455443 35667777652 1 1 22334899999999999999999998 5653233211 1112 35777
Q ss_pred CCCccCcc--ccEEEEEEeCCCCchhHHHHHHhhc-----cCCCccCCChHHHHHHHHHHHHHhhCchHHHH
Q 016668 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (385)
Q Consensus 311 S~hK~l~G--prgG~I~~~~~~~~~~~~~~~i~~~-----~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y 375 (385)
++.|.+.| +.+|++++++ ++.+.+... .+.+..-+.++..+++...+|+.+.++++.+.
T Consensus 267 t~gK~l~gG~~p~~av~~~~------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~ 332 (422)
T PRK05630 267 CVGKALTGGFMSFAATLCTD------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQ 332 (422)
T ss_pred eeechhhcCccccceeeccH------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHH
Confidence 45699954 6788888887 566655421 11121113455666666667887776655433
No 342
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.59 E-value=3.9e-06 Score=85.38 Aligned_cols=237 Identities=15% Similarity=0.095 Sum_probs=117.0
Q ss_pred CcHHHHHHHhhHhhcc-CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC-CCCcceeecCCcHHHHHHHHHHhc--
Q 016668 114 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE-NKWGVNVQPLSGSPANFEVYTAIL-- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~-y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~-~~~~~~V~~~sGs~A~~~a~~all-- 189 (385)
.+|.|.+++...+... +..+ ..+ .++ .+....+++.++..... ....+.+..+|||+|+..++....
T Consensus 52 ~~p~v~~ai~~ql~~~~~~~~----~~~-~~~----~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~ 122 (412)
T TIGR02407 52 NNPKLKQALIDYLADDGIIHS----LDM-ATE----AKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKV 122 (412)
T ss_pred CCHHHHHHHHHHHhhccceec----ccc-CcH----HHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhh
Confidence 3788888887776531 1111 001 122 22223445666532111 000022223799999999987552
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCCCCCCCHHHHHHHhhh-----cCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTGLVDYDMLEKTAIL-----FRP 252 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~~~~iD~d~le~~i~~-----~~p 252 (385)
....+|+...-.| ||+-.. .++..+ ..+..+|++-......-|++.+++.+.+ .++
T Consensus 123 tgr~~ii~~~~~y-----HG~t~~--als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 195 (412)
T TIGR02407 123 TGRSNVVSFTNAF-----HGMTLG--SLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLP 195 (412)
T ss_pred cCCCeEEEECCCc-----CCchHH--HHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCce
Confidence 3346788765332 332100 011111 0112223221000001246778887753 234
Q ss_pred cEEEEcCCC--CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCc--cccE
Q 016668 253 KLIIAGASA--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR--GPRG 321 (385)
Q Consensus 253 klIi~~~s~--~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~--Gprg 321 (385)
..|++.+.. .+. ..-+++|+++|+++|+++|.|+.+. |+.-.|.. . .... ..|++++| |++. |.+.
T Consensus 196 aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GRtG~~~a~~~~~v~PDi~~~~--K~lg~~G~pi 272 (412)
T TIGR02407 196 AAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQA-GCGRTGTFFSFEPAGIEPDIVCLS--KSISGYGLPL 272 (412)
T ss_pred EEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhHHhcccCCCCCEEEec--hhccCCccce
Confidence 667775421 222 2238999999999999999999984 54222221 1 1122 45877654 9984 5567
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH-hhCchHHHHHH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH-AQSPEFKVYQN 377 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e-~~~~~~~~y~~ 377 (385)
|+++++++ + +.+......... +.++...++..++++. +.++++.+..+
T Consensus 273 gav~~~~~------~-~~~~~~~~~~T~-~gnpl~~aaa~a~l~~~i~~~~l~~~~~ 321 (412)
T TIGR02407 273 ALTLIKPE------L-DVWKPGEHNGTF-RGNNLAFVTATAALEYYWSDDAFEKAVQ 321 (412)
T ss_pred eEEEEchh------h-hccCCCccCCCC-CccHHHHHHHHHHHHHHhcccHHHHHHH
Confidence 88888773 3 333222222222 2334444444446664 44444544333
No 343
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.57 E-value=1.6e-05 Score=81.63 Aligned_cols=227 Identities=17% Similarity=0.084 Sum_probs=115.5
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
.|.|.+++...+.+. ...... .+ .++ .+....+++.+++.....+ ...+++|||+|+.+++... ....
T Consensus 72 ~p~v~~Ai~~ql~~~-~~~~~~-~~--~~~----~~~~lAe~L~~~~p~~~~~--~v~f~~SGsEA~e~AlklAr~~tgr 141 (441)
T PRK05769 72 HPKVVKAVKEQAEKF-LHYSLT-DF--YYE----PAVELAERLVEIAPGGFEK--KVFFTNSGTESNEAAIKIARYHTGR 141 (441)
T ss_pred CHHHHHHHHHHHHhc-cCccCc-cc--CCH----HHHHHHHHHHHhCCCCCCC--EEEECCchHHHHHHHHHHHHHHhCC
Confidence 688888888776532 111110 11 122 2333456677777522101 2356789999999988644 2234
Q ss_pred CEEeecCCCCCccccCCccccccccccCc-------------ceEEEEeccccC------CCC----CCCHHHHHH-Hhh
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDE------STG----LVDYDMLEK-TAI 248 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~~~~------~~~----~iD~d~le~-~i~ 248 (385)
++|+...-.| ||+... .++..+ ..+..++++... ++. .-+.+.+++ +++
T Consensus 142 ~~Ii~~~~~y-----HG~t~~--~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~ 214 (441)
T PRK05769 142 KYIIAFLGAF-----HGRTYG--SLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFK 214 (441)
T ss_pred CeEEEECCCc-----CCccHH--HHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHh
Confidence 6787765332 332100 011110 012222321100 000 012344665 222
Q ss_pred ----hcCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCcc
Q 016668 249 ----LFRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKS 315 (385)
Q Consensus 249 ----~~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~ 315 (385)
..+..+|++.+. ..+...+ +++|.++|+++|+++|+|++|. |+.-.|... ..+. ..|++++ .|.
T Consensus 215 ~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~t-G~gr~G~~~a~~~~gv~pDivt~--~K~ 291 (441)
T PRK05769 215 KLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQT-GMGRTGKMFAIEHFGVEPDIITL--AKA 291 (441)
T ss_pred hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccceehhhccCCCCCEEEE--ccc
Confidence 123556777542 2234445 9999999999999999999985 553334221 1122 3588764 598
Q ss_pred Cc-cccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhC
Q 016668 316 LR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 316 l~-GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~ 369 (385)
+. |.+.|+++++++ +.+.+.. ....+.++ ++...++...+|+.+.+
T Consensus 292 l~~G~p~gav~~~~~------i~~~~~~-~~~~T~~g-~p~~~aaa~a~L~~l~~ 338 (441)
T PRK05769 292 IAGGLPLGAVIGRAE------LMFLPPG-SHANTFGG-NPVAAAAALATLEELEE 338 (441)
T ss_pred ccCCcccEEEEEehh------hhhcCCC-CCCCCCCc-CHHHHHHHHHHHHHHHH
Confidence 84 456788888873 4433221 22223333 33444444556766654
No 344
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.56 E-value=1.4e-06 Score=87.30 Aligned_cols=282 Identities=14% Similarity=0.178 Sum_probs=156.9
Q ss_pred hcccCC-hHHHHHHHHHHHHhhh-ccccccCCCC-CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 82 SLGEAD-PEVCEIITKEKERQFK-SLELIASENF-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 82 ~l~~~d-p~~~~~i~~e~~~~~~-~l~Liasen~-~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
+-+.++ .++++++++|..---. .+.+...-++ .++...+.....+ ++++.-.+. .+++ ..++|.+|...++
T Consensus 57 P~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~-~k~N~l~~d--~fp~---~~~~e~~~Vnm~~ 130 (491)
T KOG1383|consen 57 PSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAY-NKFNPLHPD--EFPV---VRKLEAECVNMIA 130 (491)
T ss_pred CCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHH-hhcCccCcc--ccch---hHHHHHHHHHHHH
Confidence 345566 5788888887543221 1222211111 1333333333222 232111111 2333 3489999999999
Q ss_pred HHcCCCCCCCcceeecCCcHHHHHHHHHHh---ccC--C---CEEeecCCCCCccccCCccccccccccCcceEEEEecc
Q 016668 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAI---LKP--H---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR 230 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sGs~A~~~a~~al---l~p--G---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~ 230 (385)
.+|+.+.+..| .-+++||++..++.... .+. | -.|+++.. .|.+.- +.....+.+++-++
T Consensus 131 ~L~~~~~~~~g--~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~---v~~a~e-----K~a~yf~v~l~~V~-- 198 (491)
T KOG1383|consen 131 NLFNAPSDSCG--CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN---VHAAFE-----KAARYFEVELREVP-- 198 (491)
T ss_pred HHhcCCccccC--ccccccchHHHHHHHHHHHHHHhccCCCCccccchHH---HHHHHH-----HHHhhEEEEEEeee--
Confidence 99999876443 34667788855554332 111 1 12222221 221100 22334455455555
Q ss_pred ccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCHHHHHHHHHH-cCcEEEEecccccccccc-Ccc-cCCCC--
Q 016668 231 LDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADA-VGALLMMDMAHISGLVAA-SVV-ADPFK-- 303 (385)
Q Consensus 231 ~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~~dl~~I~~ia~~-~ga~livD~ah~~Gli~~-g~~-~~p~~-- 303 (385)
+++.+..+|+.++.+.+.+ ++.+++...+++ +...|+++|.++.-+ +++.+++|++- -|++.. +.. ..+++
T Consensus 199 ~~~~~~~~D~~k~~~~i~e-Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~-GgFi~p~~~~~~~~fdFr 276 (491)
T KOG1383|consen 199 LDEGDYRVDPGKVVRMIDE-NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACL-GGFINPAGYLNEEEFDFR 276 (491)
T ss_pred ccccceEecHHHHHHHhcc-ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccC-ccccccccccCccccccC
Confidence 6666789999999999976 677777665654 467789999999999 99999999985 455542 322 12333
Q ss_pred --CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhh--c--cCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 304 --YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN--A--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 304 --gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~--~--~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
+.--...++||.-..|.| ++++.+.+....+++.-.++. + .-|++-|+-.-.++++.=+++-.+-.++|++-.
T Consensus 277 ~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~ 356 (491)
T KOG1383|consen 277 VPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENT 356 (491)
T ss_pred CCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHH
Confidence 444578999997455776 777777652111111111111 0 112222322234444444466566677888888
Q ss_pred HHHhccc
Q 016668 377 NKSACKP 383 (385)
Q Consensus 377 ~~v~~~~ 383 (385)
++++++.
T Consensus 357 ~~ive~~ 363 (491)
T KOG1383|consen 357 QNIVETA 363 (491)
T ss_pred HHHHHHH
Confidence 8888764
No 345
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.56 E-value=1.1e-05 Score=82.92 Aligned_cols=100 Identities=13% Similarity=0.118 Sum_probs=61.4
Q ss_pred CHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 267 dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
-+++|+++|+++|+++|.|+.+ .|+.-.|... ..+. ..|+++ +.|.+ .|.+.|++++++ ++ +.+..
T Consensus 228 yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~G~Pigav~~~~------~~-~~~~~ 297 (442)
T TIGR00709 228 WLQKIREVTRKHDIKLILDEVQ-AGFGRSGTMFAFEHAGIEPDFVV--MSKAVGGGLPLAVLLIAP------EF-DAWQP 297 (442)
T ss_pred HHHHHHHHHHHcCCEEEEeccc-cCCCCCCchhHHHHcCCCCcEEE--EcccccCCcccEEEEEch------HH-hccCC
Confidence 3899999999999999999997 4553334321 1122 458888 56998 456678888876 32 32222
Q ss_pred ccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 343 AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 343 ~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
.....+.+ .++...++...+|+.+.++++.+..+
T Consensus 298 ~~~~~T~~-gnpla~aaa~a~L~~i~~~~l~~~~~ 331 (442)
T TIGR00709 298 AGHTGTFR-GNQLAMVTGTEALNYWKDDNLAQNAQ 331 (442)
T ss_pred CcCCCCCC-cCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 22222333 44445555566777776666654444
No 346
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.52 E-value=7.9e-06 Score=84.34 Aligned_cols=236 Identities=16% Similarity=0.075 Sum_probs=123.3
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc---
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--- 189 (385)
.-+|.|.+++...+.+ ...+.. ....++ .+....+++.+++....+ ...+.+|||+|+..++....
T Consensus 72 h~~p~v~~Ai~~ql~~-l~~~~~---~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseAve~AlklAr~~~ 140 (460)
T PRK06916 72 HQVPELDEAIREQLNK-IAHSTL---LGLANV----PSILLAEKLIEVVPEGLK---KVFYSDSGATAVEIAIKMAFQYW 140 (460)
T ss_pred CCCHHHHHHHHHHHHh-CCCccc---cccCCH----HHHHHHHHHHHhCCCCCC---EEEEeCCcHHHHHHHHHHHHHHH
Confidence 4478899998877754 221111 111223 222345567777753322 24667899999999887542
Q ss_pred ----cC-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEecccc---CCCC------CCCHHHH
Q 016668 190 ----KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLD---ESTG------LVDYDML 243 (385)
Q Consensus 190 ----~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~---~~~~------~iD~d~l 243 (385)
.+ ..+|+...-.| ||.... .++..+. .+..++++.. +..+ .-|++++
T Consensus 141 ~~~g~tgr~~ii~~~~~Y-----HG~t~~--als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 213 (460)
T PRK06916 141 QNKGKPKKQRFVTLKNAY-----HGDTIG--AVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEEL 213 (460)
T ss_pred HhcCCCCCcEEEEECCcC-----CcccHH--hHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHH
Confidence 23 35787776433 332100 1111110 0122222200 0000 1235667
Q ss_pred HHHhhh--cCCcEEEEcC-C-C-CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEEC
Q 016668 244 EKTAIL--FRPKLIIAGA-S-A-YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (385)
Q Consensus 244 e~~i~~--~~pklIi~~~-s-~-~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S 311 (385)
++.++. .+...|++.+ . . .+. ..-+++++++|+++|+++|.|+.+ .|+--.|... .-+. ..|+++.
T Consensus 214 ~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-TG~GRtG~~~a~~~~gv~PDiv~~- 291 (460)
T PRK06916 214 EELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TGFGRTGKMFACEHENVTPDIMTA- 291 (460)
T ss_pred HHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCcCchhhHHHhcCCCCCeeee-
Confidence 777753 2345677765 1 1 222 122899999999999999999998 5542233211 1122 4688765
Q ss_pred CCccCc-c-ccEEEEEEeCCCCchhHHHHHHhh------ccCC-CccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 312 THKSLR-G-PRGGMIFFKKDPVLGVELESAINN------AVFP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 312 ~hK~l~-G-prgG~I~~~~~~~~~~~~~~~i~~------~~fp-~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
.|.|. | ...|.+++++ ++.+.+.. ..+. .++++ ++...++...+|+.+.++++.+..
T Consensus 292 -gK~l~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~~T~~g-npl~~aaa~a~l~~l~~~~l~~~~ 357 (460)
T PRK06916 292 -GKGLTGGYLPIAITVTTD------EIYNAFYGDYEEQKTFFHGHSYTG-NPLGCAVALANLELYEKTNLIEQV 357 (460)
T ss_pred -ehhhhcCccccceeeecH------HHHHHhhccccccCccccCCCCCC-CHHHHHHHHHHHHHHHhccHHHHH
Confidence 59884 4 2456667766 56555532 1222 23333 444455555577766666654433
No 347
>PRK06149 hypothetical protein; Provisional
Probab=98.51 E-value=2.7e-05 Score=87.31 Aligned_cols=233 Identities=13% Similarity=0.038 Sum_probs=117.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-+|.|.+++...+.. .. ...++ .++.. ....+++++++.-..+ ...+++|||+||.+++... ...
T Consensus 600 ~hp~v~~Ai~~q~~~-l~---~~~~~--~~~~~----~elae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 666 (972)
T PRK06149 600 GHPRLAAAAARQWSL-LN---TNSRF--HYAAV----AEFSERLAALAPDGLD---TVFLVNSGSEANDLAIRLAWAASG 666 (972)
T ss_pred CCHHHHHHHHHHHHh-cc---ccccc--cCHHH----HHHHHHHHHhCCCCcC---EEEEeCCchHHHHHHHHHHHHhcC
Confidence 379999998877653 21 11222 22322 2234567777732111 2466789999999998732 223
Q ss_pred CCEEeecCCCCCccccCCcccccccc--------ccC-c--ceEEEEecccc-CCCC-CCC-----HHHHHHHhhh----
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRV--------SGT-S--IYFESMPYRLD-ESTG-LVD-----YDMLEKTAIL---- 249 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~--------~~~-g--~~~~~i~~~~~-~~~~-~iD-----~d~le~~i~~---- 249 (385)
..+|+..+-.| ||+-.....+ ... . ..+..++++-. .... ..| .+++++.++.
T Consensus 667 r~~ii~~~~~y-----HG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 741 (972)
T PRK06149 667 RRDVVSVLEAY-----HGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDAS 741 (972)
T ss_pred CCeEEEEeCCC-----CCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhc
Confidence 45666665332 3221000000 000 0 01122221100 0000 112 2444443321
Q ss_pred -cCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C-CCcEEEECCCccCc-
Q 016668 250 -FRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLR- 317 (385)
Q Consensus 250 -~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~-gaDiv~~S~hK~l~- 317 (385)
.++..||+.+. ..|...+ +++++++|+++|+++|+|+.| .|+.-.|.....+ . ..|++++ .|.+.
T Consensus 742 ~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~-tGfGRtG~~~~a~e~~gv~PDivt~--gK~lg~ 818 (972)
T PRK06149 742 GRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQ-VGYGRLGHYFWGFEQQGVVPDIITM--AKGMGN 818 (972)
T ss_pred CCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeeh-hcCCccCccchhhhhcCCCCCEEEe--cccccC
Confidence 23456776542 2233334 899999999999999999998 3432223211111 2 4688854 69985
Q ss_pred cccEEEEEEeCCCCchhHHHHHHhh-ccCCCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 318 GPRGGMIFFKKDPVLGVELESAINN-AVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 318 GprgG~I~~~~~~~~~~~~~~~i~~-~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
|...|++++++ ++.+.+.. ..+...+++ ++...++-.++|+.+.++++.+
T Consensus 819 G~Pl~av~~~~------~i~~~~~~~~~~~sT~~g-nP~~~aaala~L~~i~~e~l~~ 869 (972)
T PRK06149 819 GHPLGAVITRR------EIAEALEAEGYFFSSTGG-SPVSCRIGMAVLDVLREEKLQE 869 (972)
T ss_pred CeeeEEEEEcH------HHHhhhccCCcccCCCCC-CHHHHHHHHHHHHHHHhcCHHH
Confidence 44557778877 56666653 223233333 4444444455677776665543
No 348
>PRK07480 putative aminotransferase; Validated
Probab=98.51 E-value=1.8e-05 Score=81.63 Aligned_cols=235 Identities=13% Similarity=0.012 Sum_probs=117.7
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~---- 190 (385)
.|.|.+++...+.. ....... +...++ .+....+++.+++....+ -..+.+|||+|+.+++.....
T Consensus 68 ~p~v~~Ai~~q~~~-~~~~~~~--~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~SGseA~e~AlklAr~~~~~ 137 (456)
T PRK07480 68 RKELADAAARQMRE-LPYYNTF--FKTTHP----PAIELAAKLAEVAPPGFN---HVFFTNSGSEANDTVLRMVRHYWAL 137 (456)
T ss_pred CHHHHHHHHHHHHh-cCCcccc--cccCCH----HHHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 68888888777653 2110000 001122 222245567777753321 235678999999998865421
Q ss_pred ---C-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCC---CC-CCC-----HHHHHH
Q 016668 191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES---TG-LVD-----YDMLEK 245 (385)
Q Consensus 191 ---p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~---~~-~iD-----~d~le~ 245 (385)
+ ..+|+...-.| ||.... .++..|. .+..++++.... +. ..+ .+.+++
T Consensus 138 ~g~~~r~~ii~~~~~y-----HG~tl~--a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 210 (456)
T PRK07480 138 KGKPQKKVIISRKNGY-----HGSTVA--GASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEA 210 (456)
T ss_pred cCCCCCcEEEEECCCc-----CCcchh--hhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHH
Confidence 3 34677765332 332100 1111110 011112110000 00 001 256665
Q ss_pred Hhhh---cCCcEEEEcCCC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCC
Q 016668 246 TAIL---FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTH 313 (385)
Q Consensus 246 ~i~~---~~pklIi~~~s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~h 313 (385)
.+.. .+...||+.+.. .+...+ +++|+++|+++|+++|+|+.+ .|+--.|... .-++ ..|++++ .
T Consensus 211 ~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~--g 287 (456)
T PRK07480 211 KILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVI-CGFGRTGEWFGSQHFGIKPDLMTI--A 287 (456)
T ss_pred HHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCcCcchhhhhhcCCCCCeeee--e
Confidence 5532 234567775421 222222 899999999999999999998 3442223211 1122 3577765 5
Q ss_pred ccCccc--cEEEEEEeCCCCchhHHHHHHh--hccC--CCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 314 KSLRGP--RGGMIFFKKDPVLGVELESAIN--NAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 314 K~l~Gp--rgG~I~~~~~~~~~~~~~~~i~--~~~f--p~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
|.+.|- ..|.+++++ ++.+.+. ...+ ..+++ .++...|+...+|+.+.++++.+..
T Consensus 288 K~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~T~~-gnpl~~Aaa~a~L~~l~~~~l~~~~ 349 (456)
T PRK07480 288 KGLTSGYIPMGAVGVGD------RVAEVLIEEGGEFNHGFTYS-GHPVAAAVALANLRILRDEGIVERV 349 (456)
T ss_pred hhhccCCccceEEEEcH------HHHHHHhcCCCCcccCCCCC-cCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 998651 345555565 5666552 2211 22333 3455666666688877776654433
No 349
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.51 E-value=1.1e-05 Score=82.66 Aligned_cols=236 Identities=13% Similarity=0.032 Sum_probs=123.2
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
-.|.|.+++...+.+ ....... .+ -++ .+....+++.+++....+ ...++.|||+|+.+++.....
T Consensus 61 ~~p~v~~ai~~q~~~-~~~~~~~--~~-~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~~~ 129 (429)
T PRK06173 61 NHPRLNAAATNQLAK-MSHIMFG--GF-THE----PAVELAQKLLEILPPSLN---KIFFADSGSVAVEVAMKMALQYQQ 129 (429)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc--cc-CCH----HHHHHHHHHHhhCCCCcC---EEEEeCCchHHHHHHHHHHHHHHH
Confidence 368888888877643 2111110 01 122 222244566676642221 235678999999998865421
Q ss_pred ----C-CCEEeecCCCCCccccCCccccccccccCcc-------------eEEEEeccccCC--C-CCCCHHHHHHHhhh
Q 016668 191 ----P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDES--T-GLVDYDMLEKTAIL 249 (385)
Q Consensus 191 ----p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~i~~~~~~~--~-~~iD~d~le~~i~~ 249 (385)
+ ..+|+...-.| ||.-. ..++..+. .+..++++.... . ..-+++.+++.++.
T Consensus 130 ~~g~~~r~~ii~~~~~y-----HG~t~--~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~ 202 (429)
T PRK06173 130 AKGEVQRTKFATIRSGY-----HGDTW--HAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ 202 (429)
T ss_pred HhCCCCCcEEEEECCCc-----CCcch--hhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh
Confidence 3 35687776433 33100 01111110 011222221100 0 01146667777753
Q ss_pred c--CCcEEEEcCC--CC-C----CCCCHHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEECCCccCc
Q 016668 250 F--RPKLIIAGAS--AY-P----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLR 317 (385)
Q Consensus 250 ~--~pklIi~~~s--~~-~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S~hK~l~ 317 (385)
. +...|++.+. .. + ...-+++++++|+++|+++|+|++| .|+.-.|.. ..-++ ..|+++ +.|.|.
T Consensus 203 ~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~ 279 (429)
T PRK06173 203 KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TGFGRTGKLFALEHAGVVPDIMC--IGKALT 279 (429)
T ss_pred CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-cCCCcCCcchHHHhcCCCCCEEE--eehhhh
Confidence 2 3456777652 22 2 2223899999999999999999999 775323322 11122 457877 679984
Q ss_pred -c-ccEEEEEEeCCCCchhHHHHHHhhc-----cCCCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 318 -G-PRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 318 -G-prgG~I~~~~~~~~~~~~~~~i~~~-----~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
| ...+.++.++ ++.+.+... .+..+++ .++..+++...+|+.+.++++.+..+
T Consensus 280 gG~~p~~a~~~~~------~i~~~~~~~~~~~~~~~~T~~-g~p~~~aaa~a~l~~i~~~~~~~~~~ 339 (429)
T PRK06173 280 GGYLTLSATITTE------AIAQTICSGEAKCFMHGPTFM-ANPLACAIAAESIRLLLESPWQQNIQ 339 (429)
T ss_pred CCccccceEEecH------HHHHHHhcCCCCccccCCCCC-cCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 3 2456666666 465655321 1122233 34566666666888777666544433
No 350
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.50 E-value=2.3e-05 Score=80.73 Aligned_cols=232 Identities=10% Similarity=0.026 Sum_probs=122.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.+ ....... .+ .++ ......+++.++++.... ...+.+|||+|+..++....
T Consensus 71 ~~p~v~~Ai~~ql~~-~~~~~~~-~~--~~~----~~~~lAe~L~~~~p~~~~---~v~f~~sGseAve~AlKlA~~~~~ 139 (453)
T PRK06943 71 ANPRINAALKDQLDT-LEHAMLA-GC--THE----PAIELAERLAALTGGTLG---HAFFASDGASAVEIALKMSFHAWR 139 (453)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc-cc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCCHHHHHHHHHHHHHHHH
Confidence 478888888877653 2111110 01 122 222245567777764321 23556789999999887542
Q ss_pred ---c-CCCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCCC--C-------CCCHHHHH
Q 016668 190 ---K-PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDEST--G-------LVDYDMLE 244 (385)
Q Consensus 190 ---~-pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~~--~-------~iD~d~le 244 (385)
. ...+|+...-.| ||.... .++..|. .+..++++..... . .-|+++++
T Consensus 140 ~rg~~~r~~Ii~~~~~y-----HG~t~g--als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 212 (453)
T PRK06943 140 NRGRGDKREFVCLANGY-----HGETIG--ALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVR 212 (453)
T ss_pred HhCCCCCCEEEEECCCc-----CCCcHH--hhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHH
Confidence 1 236788776433 332100 1111110 1122332211000 0 11357777
Q ss_pred HHhhh--cCCcEEEEcCC--C-CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECC
Q 016668 245 KTAIL--FRPKLIIAGAS--A-YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTT 312 (385)
Q Consensus 245 ~~i~~--~~pklIi~~~s--~-~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~ 312 (385)
+.++. .+...|++.+. . .+. ..-+++++++|++||+++|.|+.+ .|+--.|... .-+. ..|+++++
T Consensus 213 ~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG~GRtG~~fa~~~~gv~PDivt~g- 290 (453)
T PRK06943 213 RLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIA-VGCGRTGTFFACEQAGVWPDFLCLS- 290 (453)
T ss_pred HHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechh-hCCCCCcchhHHHhCCCCCCeEeee-
Confidence 77753 23456777652 1 222 223899999999999999999997 4542223211 1122 46888875
Q ss_pred CccCc-c-ccEEEEEEeCCCCchhHHHHHHhhc-----cCCC-ccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 313 HKSLR-G-PRGGMIFFKKDPVLGVELESAINNA-----VFPG-LQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 313 hK~l~-G-prgG~I~~~~~~~~~~~~~~~i~~~-----~fp~-~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
|.+. | ...|.+++++ ++.+.+... .+.+ +++ .++...++...+|+.+.++++-
T Consensus 291 -Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~i~~~~l~ 351 (453)
T PRK06943 291 -KGISGGYLPLSLVLSRD------AIFAAFYDDDVTRGFLHSHSYT-GNPLACRAALATLDLFAEDDVL 351 (453)
T ss_pred -hhhccCcccceEEEEcH------HHHHhhcccCccCCccCCCCCC-CCHHHHHHHHHHHHHHHhcCHH
Confidence 9884 4 2466677776 566655421 1122 222 3444555556677777766653
No 351
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.50 E-value=9.1e-07 Score=89.56 Aligned_cols=152 Identities=19% Similarity=0.233 Sum_probs=85.0
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHh---ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEe
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~al---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~ 228 (385)
.+..++++.|.+. +|.....| +.+-.++.++. -+.+++|+++...|+.+.. +.. ..+...| ++++.
T Consensus 115 ~Qs~i~eLTGmdv----aNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~---v~~-t~a~~~g--~~iv~ 184 (429)
T PF02347_consen 115 YQSMICELTGMDV----ANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRA---VLR-TYAAPLG--IEIVE 184 (429)
T ss_dssp HHHHHHHHHTSSE----E-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHH---HHH-HHCCHCC--EEEEE
T ss_pred HHHHHHHhhCCCc----cCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHH---HHH-HhhhhCC--eEEEE
Confidence 5778999999986 34444443 33334444443 2334699998865544332 000 0122334 45555
Q ss_pred ccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc
Q 016668 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (385)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD 306 (385)
.+.+ +++..| ..++..|++.+|+ +|...|+++|.+++|++|+++++ .+.- .+-+....|-+ |+|
T Consensus 185 ~~~~-~~~~~d---------~~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~---~aL~~l~~Pge~GAD 250 (429)
T PF02347_consen 185 VPLD-EDGTTD---------DDDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADP---NALGGLKSPGEYGAD 250 (429)
T ss_dssp E-BB-TTCSB----------STTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGC---CGCCTC--GGGGT-S
T ss_pred eccc-ccCCcc---------ccCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCH---HHHhCcCChhhcCcc
Confidence 4454 345555 2356677776665 57778899999999999999987 5542 22233456667 999
Q ss_pred EEEECCCccC------ccccEEEEEEeCC
Q 016668 307 VVTTTTHKSL------RGPRGGMIFFKKD 329 (385)
Q Consensus 307 iv~~S~hK~l------~GprgG~I~~~~~ 329 (385)
|++++ ||+| +||..|++.++++
T Consensus 251 I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~ 278 (429)
T PF02347_consen 251 IVVGE-HQTFGIPMGFGGPGAGFFAVRED 278 (429)
T ss_dssp EEEEC-CTTTT---CCC-S--EEEEE-GG
T ss_pred EEeeC-CCCCcccCCCCCCCeeeEEEhhh
Confidence 99776 8886 5677799999886
No 352
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.49 E-value=2.1e-05 Score=81.20 Aligned_cols=236 Identities=15% Similarity=0.072 Sum_probs=121.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
.+|.|.+++...+.. .... ..++ .++ .+....+++.++++...+ ...+++||++|+.+++... ...
T Consensus 88 ~~p~v~~Ai~~ql~~-~~~~--~~~~--~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGseAve~AlklAr~~tg 155 (459)
T PRK06082 88 GHPHVIEKVKEQMAK-LPFS--PRRF--TNE----TAIECAEKLTEIAGGELN---RVLFAPGGTSAIGMALKLARHITG 155 (459)
T ss_pred CCHHHHHHHHHHHHh-CCCc--cCcc--CCH----HHHHHHHHHHHhCCCCCC---EEEECCCcHHHHHHHHHHHHHhcC
Confidence 478999998877753 3221 1122 233 222345567888753321 2456788999999988644 233
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCC-CC-CC------CHHHHHHHhhhc-
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-LV------DYDMLEKTAILF- 250 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~-~~-~i------D~d~le~~i~~~- 250 (385)
..+|+...-.| ||... ..++..+. .+..++++.... .. .. +++.+++.++..
T Consensus 156 r~~ii~~~~~y-----HG~t~--~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 228 (459)
T PRK06082 156 NFKVVSLWDSF-----HGASL--DAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG 228 (459)
T ss_pred CCEEEEEeCCC-----cCccH--HHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC
Confidence 46777765332 33210 01111111 012222111000 00 01 135577776432
Q ss_pred CCcEEEEcCCC-CCC-CCC---HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCcc--cc
Q 016668 251 RPKLIIAGASA-YPR-DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PR 320 (385)
Q Consensus 251 ~pklIi~~~s~-~~~-~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~G--pr 320 (385)
+...||+.+.. .+. ..+ +++|+++|+++|+++|+|+.|. |+--.|.. . .-+. ..|+++ +.|.+.| ..
T Consensus 229 ~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~t-G~GRtG~~fa~e~~gv~PDiv~--~gKgl~gG~~P 305 (459)
T PRK06082 229 GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPN-GMGRTGEWFTHQAYGIEPDILC--IGKGLGGGLVP 305 (459)
T ss_pred CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-CCCccchhhHhHhhCCCCCEEE--ecccccCCCCc
Confidence 34566765421 111 223 8999999999999999999984 55223321 1 1122 468887 5799854 24
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
.|.+++++ ++....+......+.+ .++...++...+|+.+.++++.+..++
T Consensus 306 ~~av~~~~------~i~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~~l~~~~~~ 356 (459)
T PRK06082 306 IAAMITKD------KYNTAAQISLGHYTHE-KSPLGCAAALATIEVIEQEGLLEKVKA 356 (459)
T ss_pred ceEEEEcH------HHHhhccCCCCCCCCC-cCHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 56666665 3443332211112333 334445555556777766666554444
No 353
>PRK05965 hypothetical protein; Provisional
Probab=98.48 E-value=1.3e-05 Score=82.59 Aligned_cols=232 Identities=14% Similarity=0.065 Sum_probs=118.8
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~---- 190 (385)
+|.|.+++.+.+.+- . +....+...++ .+..+.+++.+++..+.+ ...+.+|||+|+.+++.....
T Consensus 64 ~p~i~~Ai~~q~~~~-~--~~~~~~~~~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGSEAve~AlKlAr~~~~~ 133 (459)
T PRK05965 64 QESIVEAAAEQMREL-P--YATGYFHFGSE----PAIRLAAKLAERAPGSLN---HVYFTLGGSDAVDSAVRFIRHYWNA 133 (459)
T ss_pred CHHHHHHHHHHHHhc-C--CcccccccCCH----HHHHHHHHHHhhCCCCcC---EEEEeCChhHHHHHHHHHHHHHHHh
Confidence 688899888777532 1 11111101122 222244567777643221 234557899999998865421
Q ss_pred ---C-CCEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCC-CCCCC--------HHHHHH
Q 016668 191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES-TGLVD--------YDMLEK 245 (385)
Q Consensus 191 ---p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~-~~~iD--------~d~le~ 245 (385)
+ ..+|+..+-.| ||+-.. .+...+ ..+..++++.... ...-| ++++++
T Consensus 134 ~g~~~r~kii~~~~~Y-----HG~t~~--a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 206 (459)
T PRK05965 134 TGRPSKKQFISLERGY-----HGSSSV--GAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRA 206 (459)
T ss_pred cCCCCccEEEEecCCc-----CcccHH--HHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHH
Confidence 2 35788776443 332100 000100 0011222211000 00112 356777
Q ss_pred Hhhhc---CCcEEEEcCCC--CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCC
Q 016668 246 TAILF---RPKLIIAGASA--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTH 313 (385)
Q Consensus 246 ~i~~~---~pklIi~~~s~--~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~h 313 (385)
.++.. +...||+.+.. .+. ..-+++++++|++||+++|.|+.+ .|+.-.|... .-+. ..|+++.+
T Consensus 207 ~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tGfGRtG~~~a~~~~gv~PDiv~~g-- 283 (459)
T PRK05965 207 KVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVI-TGFGRTGPLFACEAEGVVPDLMTVA-- 283 (459)
T ss_pred HHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechh-ccCccCchhhhHhhcCCCCCeEEec--
Confidence 77532 34567775421 122 223799999999999999999997 4542222211 1122 46888875
Q ss_pred ccCccc--cEEEEEEeCCCCchhHHHHHHhhc------cCC-CccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 314 KSLRGP--RGGMIFFKKDPVLGVELESAINNA------VFP-GLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 314 K~l~Gp--rgG~I~~~~~~~~~~~~~~~i~~~------~fp-~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
|.|.|- ..|.+++++ ++.+.+... ... .+.+ .|+...|+...+|+.+.++++-
T Consensus 284 Kgl~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L~~l~~~~l~ 345 (459)
T PRK05965 284 KGLTSGYVPMGAVLMSD------HVYQGIADGAGAAAPVGHGYTYS-AHPVSAAVGLEVLRLYHEGGLL 345 (459)
T ss_pred hhhccCCcceeEEEEcH------HHHHHHhccccccccccccCCCC-CCHHHHHHHHHHHHHHHhccHH
Confidence 998432 456677776 566655421 112 2223 3444455545567777666653
No 354
>PRK06917 hypothetical protein; Provisional
Probab=98.46 E-value=2.1e-05 Score=80.90 Aligned_cols=232 Identities=15% Similarity=0.097 Sum_probs=121.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.. ....+.. . + .++ .+....+++.+++....+ ...+++|||+|+.+++....
T Consensus 48 ~hp~v~~Ai~~ql~~-~~~~~~~-~-~-~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGsEAve~AlklAr~~~~ 116 (447)
T PRK06917 48 GVKEIADAIKEQAEE-VSFVYRS-Q-F-TSE----PAEKLAKKLSDLSPGDLN---WSFFVNSGSEANETAMKIAIQHFQ 116 (447)
T ss_pred CCHHHHHHHHHHHhh-CcCcccc-c-c-CCH----HHHHHHHHHHHhCCCCCC---EEEEeCChHHHHHHHHHHHHHHHH
Confidence 378888888877654 2211111 1 1 122 222345667777754322 23567899999999987552
Q ss_pred ---cC-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccc------cCCCC---CCCHHHHH
Q 016668 190 ---KP-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRL------DESTG---LVDYDMLE 244 (385)
Q Consensus 190 ---~p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~------~~~~~---~iD~d~le 244 (385)
.+ ..+|+...-.| ||+... .++..+. .+..++++. +.+.. .-|++.++
T Consensus 117 ~rg~t~r~~ii~~~~~y-----HG~t~~--als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le 189 (447)
T PRK06917 117 ERGIQGKHKILSRWMSY-----HGITMG--ALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELE 189 (447)
T ss_pred hcCCCCCCEEEEECCCc-----CCccHH--HHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHH
Confidence 12 36787765332 333110 1111110 011111111 00000 11346677
Q ss_pred HHhhhc---CCcEEEEcCCC--CC-C----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEEC
Q 016668 245 KTAILF---RPKLIIAGASA--YP-R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTT 311 (385)
Q Consensus 245 ~~i~~~---~pklIi~~~s~--~~-~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S 311 (385)
+.++.. +...|++.+.. .+ . ..-+++++++|+++|+++|+|+.+. |+--.|... .-++ ..|++++
T Consensus 190 ~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~t-GfGRtG~~~a~~~~gv~PDi~~~- 267 (447)
T PRK06917 190 TAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMT-GLGRTGAMFAMEHWGVEPDIMTL- 267 (447)
T ss_pred HHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhh-CcCcccchhhHHhcCCCCCEEEe-
Confidence 777532 34567776522 11 1 2238999999999999999999984 652233211 1122 4688765
Q ss_pred CCccCccc--cEEEEEEeCCCCchhHHHHHHhhc---cCCC-ccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 312 THKSLRGP--RGGMIFFKKDPVLGVELESAINNA---VFPG-LQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 312 ~hK~l~Gp--rgG~I~~~~~~~~~~~~~~~i~~~---~fp~-~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
.|.+.|- ..|.+++++ ++.+.+... .+.+ ++ +.++...++...+++.+.++++.
T Consensus 268 -gK~l~~G~~Pi~a~~~~~------~i~~~~~~~~~~~~~~~T~-~gnpl~~aaa~a~l~~l~~~~l~ 327 (447)
T PRK06917 268 -GKGLGAGYTPIAATVVSD------RVMEPILRGSRSIMSGHTL-SANPLSAATALAVLEYMEKHNLP 327 (447)
T ss_pred -eehhccCCcceEEEEEcH------HHHHHHhccCcccccccCC-CCCHHHHHHHHHHHHHHHHCCHH
Confidence 6998542 466777776 566665432 2222 23 23444556656677777665553
No 355
>PRK07678 aminotransferase; Validated
Probab=98.45 E-value=2.6e-05 Score=80.36 Aligned_cols=229 Identities=16% Similarity=0.065 Sum_probs=117.1
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK---- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~---- 190 (385)
.|.|.+++...+..- . +... .+ .++ .+..+.+++.++++... ...+..|||+|+..++.....
T Consensus 65 ~p~v~~ai~~q~~~~-~--~~~~-~~-~~~----~~~~lae~l~~~~~~~~----~v~f~~sGseA~e~AlklAr~~t~~ 131 (451)
T PRK07678 65 RKELAEAAYEQLKTL-S--YFPL-TQ-SHE----PAIKLAEKLNEWLGGEY----VIFFSNSGSEANETAFKIARQYHAQ 131 (451)
T ss_pred CHHHHHHHHHHHHhc-C--cccc-cc-CCH----HHHHHHHHHHHhCCCCC----EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 688888877766532 1 1111 11 233 22224556777776532 234567999999998865421
Q ss_pred ---CC-CEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCC-CC-----CCC---HHHHHH
Q 016668 191 ---PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDES-TG-----LVD---YDMLEK 245 (385)
Q Consensus 191 ---pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~-~~-----~iD---~d~le~ 245 (385)
+| .+|+...-.| ||+... .++..+. .+..++++.... .. ..| ++.+++
T Consensus 132 ~g~~~r~~ii~~~~~y-----HG~t~~--als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 204 (451)
T PRK07678 132 KGEPHRYKFISRYRAY-----HGNSMG--ALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDR 204 (451)
T ss_pred cCCCCCcEEEEECCCc-----CCccHH--HhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHH
Confidence 23 5777765332 332100 1111110 112222110000 00 011 233565
Q ss_pred Hhhh---cCCcEEEEcCCC--CCCC----CCHHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEECCC
Q 016668 246 TAIL---FRPKLIIAGASA--YPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTH 313 (385)
Q Consensus 246 ~i~~---~~pklIi~~~s~--~~~~----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S~h 313 (385)
.++. .++..||+.+.. .+.. .-+++++++|+++|+++|.|+.+ .|+.-.|.. ..-+. ..|++++ .
T Consensus 205 ~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~~~~~~gv~PDivt~--g 281 (451)
T PRK07678 205 VMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVI-CGFGRTGKAFGFMNYGVKPDIITM--A 281 (451)
T ss_pred HHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh-hcCCcCchhHHHHhcCCCCCEEEe--e
Confidence 5641 234567776421 2222 22899999999999999999998 343212211 11133 4688876 5
Q ss_pred ccCcc--ccEEEEEEeCCCCchhHHHHHHhhc-----cC-CCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 314 KSLRG--PRGGMIFFKKDPVLGVELESAINNA-----VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 314 K~l~G--prgG~I~~~~~~~~~~~~~~~i~~~-----~f-p~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
|.|.| ...|.+++++ ++.+.+... .+ .++++ .++...|+..++|+.+.++++.
T Consensus 282 K~lggG~~Pi~av~~~~------~i~~~~~~~~~~~~~~h~~T~~-gnp~~~aaa~a~l~~l~~~~~~ 342 (451)
T PRK07678 282 KGITSAYLPLSATAVKK------EIYEAFKGKGEYEHFRHVNTFG-GNPAACALALKNLEIMENENLI 342 (451)
T ss_pred cccccCCcceeEEEEcH------HHHHHHhccCcccccccCCCCC-cCHHHHHHHHHHHHHHHhCCHH
Confidence 99854 2566677776 566666431 11 22333 3444555555578777666653
No 356
>PRK07481 hypothetical protein; Provisional
Probab=98.43 E-value=3.4e-05 Score=79.36 Aligned_cols=112 Identities=14% Similarity=0.141 Sum_probs=64.8
Q ss_pred CCcEEEEcCCC--CCCCC----CHHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEECCCccCcc--c
Q 016668 251 RPKLIIAGASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSLRG--P 319 (385)
Q Consensus 251 ~pklIi~~~s~--~~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S~hK~l~G--p 319 (385)
++..|++.+.. .+... -+++++++|+++|+++|.|+.+. |+.-.|.. ..-++ ..|+++.+ |.+.| .
T Consensus 213 ~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~ 289 (449)
T PRK07481 213 TIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVT-GFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYV 289 (449)
T ss_pred cEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhh-CcCcCchhhHhhhcCCCCCEEEEe--ecccCCCc
Confidence 34567776431 12221 28999999999999999999974 54222221 11122 46888774 99854 2
Q ss_pred cEEEEEEeCCCCchhHHHHHHhhc------cCC-CccCCChHHHHHHHHHHHHHhhCchH
Q 016668 320 RGGMIFFKKDPVLGVELESAINNA------VFP-GLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 320 rgG~I~~~~~~~~~~~~~~~i~~~------~fp-~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
..|.+++++ ++.+.+... ... .+++ .++-..++...+|+.+.++++
T Consensus 290 Pi~av~~~~------~i~~~~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~L~~l~~~~l 342 (449)
T PRK07481 290 PLGATMVNA------RIADAFEANADFGGAIMHGYTYS-GHPVACAAALATLDIVVREDL 342 (449)
T ss_pred CceEEEEcH------HHHHHHhccCccccccccCCCCC-CCHHHHHHHHHHHHHHHhhhH
Confidence 456667776 566666432 111 2232 234445555557777766554
No 357
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.43 E-value=4e-06 Score=78.59 Aligned_cols=160 Identities=18% Similarity=0.138 Sum_probs=107.3
Q ss_pred eeecCCcHH-HHHHHHHHhccCC-CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhh
Q 016668 171 NVQPLSGSP-ANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (385)
Q Consensus 171 ~V~~~sGs~-A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~ 248 (385)
++...-|+. .+-+++.+.+.|| |+|+..+|+++-+.- .+..-+. +++.+++++ ++.+|.|++.+.++
T Consensus 88 nic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~v--------~A~iNd~--eVvkvpl~p-dF~lnvdai~evl~ 156 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYVV--------DAAINDA--EVVKVPLNP-DFSLNVDAIAEVLE 156 (375)
T ss_pred ceEEecCcHHHHHHHHhheecCCccceeecCCcceeEEE--------EeecCCc--eEEEecCCC-CccccHHHHHHHHh
Confidence 555666774 8888889999999 899999988754321 1123334 344444554 57899999999886
Q ss_pred hc-CCcEEEEcCCCCCC--CCCHHHHHHHHHHc-CcEEEEeccccccccccCc-ccCCCCCCc-EEEECCCccC--cccc
Q 016668 249 LF-RPKLIIAGASAYPR--DFDYPRMRQIADAV-GALLMMDMAHISGLVAASV-VADPFKYCD-VVTTTTHKSL--RGPR 320 (385)
Q Consensus 249 ~~-~pklIi~~~s~~~~--~~dl~~I~~ia~~~-ga~livD~ah~~Gli~~g~-~~~p~~gaD-iv~~S~hK~l--~Gpr 320 (385)
.. ++|++++.+|.+|+ .+..+-|.+|...- +.++++|+|+ ..+.+.+. .+..-++-. ++..+++|+| +|-|
T Consensus 157 ~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAY-idFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiR 235 (375)
T KOG0633|consen 157 LDSKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAY-IDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIR 235 (375)
T ss_pred ccccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeee-EeeccccccchHhHhCCceeehhhhhhhcCcceeE
Confidence 54 78999999888874 33344455554432 6899999996 34332111 111111555 6788999996 7788
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCCc
Q 016668 321 GGMIFFKKDPVLGVELESAINNAVFPGL 348 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~~fp~~ 348 (385)
.|+-+... .+.+-+++.--|.-
T Consensus 236 vG~~~~~~------~ia~iln~~KaPYN 257 (375)
T KOG0633|consen 236 VGYGAFPL------SIAEILNRAKAPYN 257 (375)
T ss_pred eecccccH------HHHHHHHhccCCcc
Confidence 89888877 57777777765553
No 358
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.42 E-value=3e-05 Score=80.15 Aligned_cols=235 Identities=12% Similarity=0.051 Sum_probs=120.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
-.|.|.+++...+.. ....... .+ .++ ......+++.+++....+ ...+.+|||+|+..++....
T Consensus 64 ~~p~v~~Ai~~ql~~-l~~~~~~-~~--~~~----~~~~lae~L~~~~p~~~~---~v~f~~sGsEAve~AlKlAr~~~~ 132 (466)
T PRK07030 64 ANPRINQRIKDQVDQ-LEHVILA-GF--SHE----PVIELSERLVKITPPGLS---RCFYADNGSSAIEVALKMSFHYWR 132 (466)
T ss_pred CCHHHHHHHHHHHHh-cCCcccc-cc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHHHH
Confidence 368888888777643 2111110 11 122 222234567777642221 23556889999999887542
Q ss_pred --c-C-CCEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccC--CCC-------CCCHHHHH
Q 016668 190 --K-P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDE--STG-------LVDYDMLE 244 (385)
Q Consensus 190 --~-p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~--~~~-------~iD~d~le 244 (385)
. + ..+|+...-.| ||+... .++..+. .+..++++... ..+ .-+++.++
T Consensus 133 ~~g~t~r~~ii~~~~~y-----HG~t~g--a~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le 205 (466)
T PRK07030 133 NRGKPRKKRFVTLTNSY-----HGETLA--AMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHME 205 (466)
T ss_pred HhCCCCCcEEEEECCCc-----CcccHH--HHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHH
Confidence 1 2 35677766432 332100 0111110 01122221100 000 11356677
Q ss_pred HHhhhc--CCcEEEEcC-C-C-CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECC
Q 016668 245 KTAILF--RPKLIIAGA-S-A-YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTT 312 (385)
Q Consensus 245 ~~i~~~--~pklIi~~~-s-~-~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~ 312 (385)
+.+... +...|++.+ . . .+. ..-+++++++|+++|+++|.|+.+ .|+--.|... ..++ ..|+++++
T Consensus 206 ~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~-TGfGRtG~~~a~~~~gv~PDiv~~g- 283 (466)
T PRK07030 206 QTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIA-VGFGRTGTMFACEQAGIRPDFLCLS- 283 (466)
T ss_pred HHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehh-hCcCccccchHHHhcCCCCCEEeee-
Confidence 777532 345677765 2 1 222 123899999999999999999997 4442222211 1122 46888874
Q ss_pred CccCccc--cEEEEEEeCCCCchhHHHHHHhhc------cC-CCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 313 HKSLRGP--RGGMIFFKKDPVLGVELESAINNA------VF-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 313 hK~l~Gp--rgG~I~~~~~~~~~~~~~~~i~~~------~f-p~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
|.+.|- ..|.+++++ ++.+.+... .+ ..+++ .++-..++..++|+.+.++++.+.+
T Consensus 284 -Kgl~gG~~Pi~av~~~~------ei~~~~~~~~~~~~~~~h~~T~~-gnpla~aaa~a~L~~i~~~~l~~~~ 348 (466)
T PRK07030 284 -KALTGGYLPLAAVLTTD------TVYQAFYDDYPTLRAFLHSHSYT-GNPLACAAALATLDIFEQDNVIENN 348 (466)
T ss_pred -hhccCCcccceEEEecH------HHHHHHhcccccccccccCCCCC-CCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 988442 566777777 566655321 11 22233 3444555555578877776664433
No 359
>PRK06148 hypothetical protein; Provisional
Probab=98.41 E-value=2.4e-05 Score=88.06 Aligned_cols=233 Identities=17% Similarity=0.121 Sum_probs=120.8
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~pG 192 (385)
.|.|.+++...+..-.. ..++ .++ .+....+++.+++....+ ...+++|||+|+..++... ....
T Consensus 640 hp~v~~Ai~~q~~~l~~----~~~~--~~~----~~~~lAe~L~~~~p~~~~---~v~f~nSGsEA~e~AlklAr~~tGr 706 (1013)
T PRK06148 640 HPRVVAAAARQAARLNT----NTRY--LHD----AIVAYAERLTATLPDGLT---VAFFVNSGSEANSLALRLARAHTGQ 706 (1013)
T ss_pred CHHHHHHHHHHHhhcCC----cCCc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCCcHHHHHHHHHHHHHhcCC
Confidence 78999998877653211 1122 122 222345667777753221 2356789999999998754 2334
Q ss_pred CEEeecCCCCCccccCCccccccccccCc------------ceEEEEecccc-CCCCC-CC-------HHHHHHHhhh--
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLD-ESTGL-VD-------YDMLEKTAIL-- 249 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~-~~~~~-iD-------~d~le~~i~~-- 249 (385)
.+|++.+-.| ||+... .+...+ ..+..++.+.. ..... .| .+.+++.++.
T Consensus 707 ~~ii~~~~~Y-----HG~t~~--a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~ 779 (1013)
T PRK06148 707 RDAIVLDHAY-----HGTTTE--LIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMA 779 (1013)
T ss_pred CeEEEEcCCc-----cCCCcc--hhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhh
Confidence 5787765332 333110 011111 00111111100 00000 11 1345555431
Q ss_pred ---cCCcEEEEcCC--CCCCCC----CHHHHHHHHHHcCcEEEEeccccccccccCc--cc-CCCC-CCcEEEECCCccC
Q 016668 250 ---FRPKLIIAGAS--AYPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASV--VA-DPFK-YCDVVTTTTHKSL 316 (385)
Q Consensus 250 ---~~pklIi~~~s--~~~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~--~~-~p~~-gaDiv~~S~hK~l 316 (385)
.++..||+.+. ..+... -+++++++|+++|+++|.|+.+ .|+.-.|. +- .-++ ..|+++. .|.+
T Consensus 780 ~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVq-tGfGRtG~~~~a~e~~gv~PDivt~--gK~l 856 (1013)
T PRK06148 780 AKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQ-VGFGRVGSHWWAFETQGVVPDIVTM--GKPI 856 (1013)
T ss_pred ccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecc-cCCCCCCCcchhhhhcCCCcceeee--cccc
Confidence 23556777542 122222 2899999999999999999998 34421221 11 1112 4588776 5998
Q ss_pred c-cccEEEEEEeCCCCchhHHHHHHhhcc-CCCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 317 R-GPRGGMIFFKKDPVLGVELESAINNAV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 317 ~-GprgG~I~~~~~~~~~~~~~~~i~~~~-fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
. |...|.+++++ ++.+.++... +..++++.... .++..+.++.+.+++..+.++
T Consensus 857 ggG~Plgav~~~~------ei~~~~~~g~~~~~Tf~gnpla-~aaa~a~L~~i~~e~l~~~~~ 912 (1013)
T PRK06148 857 GNGHPMGAVVTTR------EIADSFDNGMEYFNTFGGNPVS-CAIGLAVLDIIEDEDLQRNAL 912 (1013)
T ss_pred cCCcceEEEEEcH------HHHhhccCCCccccCCCCCHHH-HHHHHHHHHHHhhccHHHHHH
Confidence 4 44567777776 5777665442 33444444434 444444677776666544333
No 360
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.41 E-value=4.9e-05 Score=78.70 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=73.7
Q ss_pred CHHHHHHHhhh--cCCcEEEEcCC---CCCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCc
Q 016668 239 DYDMLEKTAIL--FRPKLIIAGAS---AYPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCD 306 (385)
Q Consensus 239 D~d~le~~i~~--~~pklIi~~~s---~~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaD 306 (385)
+++.+++.+.. .+...||+.+. ..+. ..-+++++++|+++|++||.|+.+ .|+.-.|... .-++ ..|
T Consensus 222 ~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~-TGfGRtG~~~a~e~~gv~PD 300 (472)
T PRK08742 222 AADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIA-TGFGRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh-hCCCCCccchHHHhcCCCCC
Confidence 35667777643 23456777652 2222 223899999999999999999997 4442223211 1122 468
Q ss_pred EEEECCCccCc-cc-cEEEEEEeCCCCchhHHHHHHhhc----c-CCC-ccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 307 VVTTTTHKSLR-GP-RGGMIFFKKDPVLGVELESAINNA----V-FPG-LQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 307 iv~~S~hK~l~-Gp-rgG~I~~~~~~~~~~~~~~~i~~~----~-fp~-~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
+++++ |.|. |- ..|.+++++ ++.+.+... . +.+ +.+ .++...|+...+|+.+.++++.+.+
T Consensus 301 iv~~g--Kgl~gG~~Plaav~~~~------ei~~~~~~~~~~~~~~h~~T~~-gnpl~~Aaa~a~L~~i~~~~l~~~~ 369 (472)
T PRK08742 301 LLCLS--KGLTGGFLPLSAVLATQ------QLYDAFLDDSRERAFLHSHSYT-GNPLACAAALATLDIFADDDVIARN 369 (472)
T ss_pred EEEEc--ccccCCCCCcceeeccH------HHHHHhhccCccCccCcCCCCC-ccHHHHHHHHHHHHHHHHCCHHHHH
Confidence 88875 9984 41 455566666 465555321 1 112 222 3445566656678777776664333
No 361
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.38 E-value=2.2e-05 Score=77.76 Aligned_cols=238 Identities=13% Similarity=0.075 Sum_probs=116.8
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 189 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all----- 189 (385)
+|.+.+++...+.. ....... . + -++. .....+++.++++-..+ ...+..||++|+..++....
T Consensus 34 ~p~i~~ai~~~~~~-~~~~~~~-~-~-~~~~----~~~la~~L~~~~p~~~~---~v~f~~sGseAve~Alkla~~~~~~ 102 (339)
T PF00202_consen 34 HPEIAEAIAEQANK-LNYVSFS-G-F-THPE----AAELAEKLAELFPGGLD---RVFFANSGSEAVEAALKLARQYHNK 102 (339)
T ss_dssp -HHHHHHHHHHHHH-CSSCSTT-T-S-EEHH----HHHHHHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHhhh-ccccccc-c-e-eccc----hhhhhhhhhhccccccc---eeeeccCchHHHHHHHHHhhccccc
Confidence 58888888766543 2211111 1 1 1222 22244578888833221 23556899999999986554
Q ss_pred ---cCCCEEeecCCCCCccccCCccc-----ccc-ccccCcceEEEEeccccCC--CCCCCHHHHHHHhh---hcCCcEE
Q 016668 190 ---KPHDRIMGLDLPHGGHLSHGFMT-----PKR-RVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAI---LFRPKLI 255 (385)
Q Consensus 190 ---~pGD~Vl~~~~~~ggh~s~~~~~-----~~~-~~~~~g~~~~~i~~~~~~~--~~~iD~d~le~~i~---~~~pklI 255 (385)
....+|+...-.|-|.-. +... ... ...-....+..+|++.... ...-..+++++.+. ..+...|
T Consensus 103 ~~~~~r~~il~~~~~yHG~t~-~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaav 181 (339)
T PF00202_consen 103 RAYTGRRKILAFEGSYHGRTL-GALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAV 181 (339)
T ss_dssp THHHTTTEEEEETTTB-TSSH-HHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE
T ss_pred ccccCCceEEEeeeeeeccCc-ccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEE
Confidence 244688877644322210 0000 000 0000001123334321100 00001112333322 2234467
Q ss_pred EEcCCC--CC----CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEEE
Q 016668 256 IAGASA--YP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIF 325 (385)
Q Consensus 256 i~~~s~--~~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I~ 325 (385)
|+.+.. .+ ...-+++|+++|+++|+++|+|+.+ .|+.-.|... ..+. ..|+++++ |.|. |...+.++
T Consensus 182 ivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~-tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~ 258 (339)
T PF00202_consen 182 IVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQ-TGFGRTGKFFASEHYGVDPDIVTFG--KGLGGGLPISAVL 258 (339)
T ss_dssp EEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETT-TTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTTSSEEEEE
T ss_pred EEeccccccCccccccchhhehcccccccccceeccccc-ccccccCCccceecccccCcccccc--cchhhhhhccccc
Confidence 776521 12 2223799999999999999999998 4542223211 1112 46999887 9994 45667788
Q ss_pred EeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
+++ ++.+.+.......+++ -++...++....|+.+.++++.+
T Consensus 259 ~~~------~i~~~~~~~~~~~T~~-g~p~~~aaa~~~l~~~~~~~~~~ 300 (339)
T PF00202_consen 259 GSE------EIMEAFQPGSHGSTFG-GNPLSCAAALATLEILEEEDLLE 300 (339)
T ss_dssp EEH------HHHTTSCTTSSTCTTT-T-HHHHHHHHHHHHHHHHTTHHH
T ss_pred ccc------hhhccccccccccccc-cchHhhhhhhhHHHhhccHHHHH
Confidence 887 5666553333223332 23345555555777776665543
No 362
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.37 E-value=2.4e-05 Score=80.81 Aligned_cols=237 Identities=14% Similarity=0.113 Sum_probs=116.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeec-CCcHHHHHHHHHHhc--c
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSPANFEVYTAIL--K 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~-~sGs~A~~~a~~all--~ 190 (385)
.+|.|.+++...+.+....... .+ .++. ..+ ..+++.+++..+...-...+++ .|||+|+..++.... .
T Consensus 80 ~~p~v~~Ai~~ql~~~~~~~~~---~~-~~~~---~~~-la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~t 151 (464)
T PRK06938 80 NHPVVIEAIQQVLADELPLHTL---DL-TTPV---KDQ-FVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTAT 151 (464)
T ss_pred CCHHHHHHHHHHHHhhhccccc---cc-CCHH---HHH-HHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhh
Confidence 3788888888777532211110 11 1221 112 2344555553221000012344 599999999987542 2
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCC--------CC-CCCHHHHHHHhhh
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES--------TG-LVDYDMLEKTAIL 249 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~--------~~-~iD~d~le~~i~~ 249 (385)
...+|+...-.| ||+... .++..+ ..+..++++.... +. ..+.+.+++.++.
T Consensus 152 gr~~ii~~~~~y-----HG~t~~--als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 224 (464)
T PRK06938 152 GRSTVLSFQGGY-----HGMSQG--ALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDD 224 (464)
T ss_pred CCCeEEEECCcc-----CCccHH--HHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHh
Confidence 346777765332 332100 011110 0122333322100 00 1236778887753
Q ss_pred c-----CCcEEEEcCCC--CCC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCcc
Q 016668 250 F-----RPKLIIAGASA--YPR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKS 315 (385)
Q Consensus 250 ~-----~pklIi~~~s~--~~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~ 315 (385)
. ++..||+.+.. .+. ..-+++++++|+++|+++|.|+.+ .|+--.|... .-++ ..|+++.+ |.
T Consensus 225 ~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~-tGfGRtG~~~a~e~~gv~PDiv~~g--Kg 301 (464)
T PRK06938 225 PESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQ-SGFGRTGKMFAFEHAGIIPDVVVLS--KA 301 (464)
T ss_pred hccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCCcCcHHHHHHhcCCCCCEEEee--cc
Confidence 2 34567775421 121 223899999999999999999997 4542223211 1122 46888875 98
Q ss_pred Ccc-ccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 316 LRG-PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 316 l~G-prgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
+.| -..|.+++++ ++ +.+.......++++ ++-..++..+.|+.+.++++.+.+
T Consensus 302 lggG~PlsAv~~~~------~~-~~~~~~~~~~T~~g-npla~Aaa~a~L~~l~~~~l~~~~ 355 (464)
T PRK06938 302 IGGSLPLAVVVYRE------WL-DTWQPGAHAGTFRG-NQMAMAAGSATLRYIKEHRLAEHA 355 (464)
T ss_pred ccCCCceEEEeehh------Hh-hccCCCCCCCCCCc-CHHHHHHHHHHHHHHHHhHHHHHH
Confidence 843 3456666665 33 33322222223333 334454545567766665554333
No 363
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.37 E-value=7.8e-06 Score=79.75 Aligned_cols=212 Identities=17% Similarity=0.188 Sum_probs=126.6
Q ss_pred HHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCC--CCCccccCCccccccccccCcceEEEEec----
Q 016668 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDL--PHGGHLSHGFMTPKRRVSGTSIYFESMPY---- 229 (385)
Q Consensus 156 ~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~--~~ggh~s~~~~~~~~~~~~~g~~~~~i~~---- 229 (385)
.+++.||.++ .+-+.-|-.|-...+..++++|+.+...-. ..+.|+.... ..+...|..+.-++.
T Consensus 87 avkdifGfq~-----~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr----~h~~~ng~~~~n~~~~ea~ 157 (471)
T COG3033 87 AVKDIFGFQY-----TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTR----GHIQINGATPRNVYVDEAF 157 (471)
T ss_pred HHHHhcCcee-----eeeccCCccHHHHHHHHHhhhccccCCccccccccceecchh----HHHHhcCCccccccccccc
Confidence 4678999887 355566777777777778888776654111 1123433110 112222332222211
Q ss_pred --ccc-CCCCCCCHHHHHHHhhhcCC---cEEEE---cCCCCCC---CCCHHHHHHHHHHcCcEEEEecccccc---ccc
Q 016668 230 --RLD-ESTGLVDYDMLEKTAILFRP---KLIIA---GASAYPR---DFDYPRMRQIADAVGALLMMDMAHISG---LVA 294 (385)
Q Consensus 230 --~~~-~~~~~iD~d~le~~i~~~~p---klIi~---~~s~~~~---~~dl~~I~~ia~~~ga~livD~ah~~G---li~ 294 (385)
.++ +-.|.+|++.|++++++..+ -.|++ +.+..+. ..+++++.+||+++|+.++.|++..+. ++-
T Consensus 158 d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk 237 (471)
T COG3033 158 DTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIK 237 (471)
T ss_pred cccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhh
Confidence 111 12468999999999976443 24433 3333332 346899999999999999999875432 111
Q ss_pred c---CcccCC--------CCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHh-----hccCCCccCCChHHHHH
Q 016668 295 A---SVVADP--------FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN-----NAVFPGLQGGPHNHTIG 358 (385)
Q Consensus 295 ~---g~~~~p--------~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~-----~~~fp~~qg~p~~~~ia 358 (385)
. |..... +.++|-++.|.-|--..+-||+++.+++-. .++..... +--|| ..||..--.+.
T Consensus 238 ~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmGGfl~~~D~~~--fDvy~~~~~~~V~~eG~~-tYGgl~Grdme 314 (471)
T COG3033 238 QREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMGGFLCFKDDSF--FDVYEECRTLVVVQEGFP-TYGGLAGRDME 314 (471)
T ss_pred hcCcccccccHHHHHHHHHhhhhhheeeccccceeccccEEEecCccH--HHHHHHHHhheEeecccc-ccCcccchhHH
Confidence 1 111111 127899999999975557889999998721 02222221 11122 34667777899
Q ss_pred HHHHHHHHhhCchHHHH-HHHH
Q 016668 359 GLAVCLKHAQSPEFKVY-QNKS 379 (385)
Q Consensus 359 ala~Al~e~~~~~~~~y-~~~v 379 (385)
++|+.|.|..+.+|-+| ..||
T Consensus 315 alAvGL~e~~~~~yl~~Rv~Qv 336 (471)
T COG3033 315 ALAVGLREGVNFDYLAHRVAQV 336 (471)
T ss_pred HHHHHHHHhcCcHHHHHHHHHH
Confidence 99999999999999544 3443
No 364
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.36 E-value=3.1e-05 Score=79.90 Aligned_cols=231 Identities=15% Similarity=0.093 Sum_probs=117.8
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
.+|.|.+++...+.+- . +....++ .++ ... ...+++.+++....+ ...+.+|||+|+.+++... ...
T Consensus 70 ~~p~i~~Ai~~ql~~~-~--~~~~~~~-~~~---~~~-~lae~L~~~~p~~~~---~v~f~~SGsEA~e~AlklAr~~tg 138 (457)
T PRK05639 70 SHPKLVKAVQEQVALI-Q--HSMIGYT-HSE---RAI-RVAEKLAEISPIENP---KVLFGLSGSDAVDMAIKVSKFSTR 138 (457)
T ss_pred CCHHHHHHHHHHHHhc-c--ccccCcc-CCH---HHH-HHHHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHhcC
Confidence 3788888888776532 1 1111111 122 112 244567777654322 2356789999999988754 234
Q ss_pred CCEEeecCCCCCccccCCccccccccccCc-------------ceEEEEeccccCC-----CCCCCH--------HHHHH
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-------------IYFESMPYRLDES-----TGLVDY--------DMLEK 245 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-------------~~~~~i~~~~~~~-----~~~iD~--------d~le~ 245 (385)
..+|+...-.| ||+... .++..+ ..+..++++.... +..-|. +.+++
T Consensus 139 r~~ii~~~~~y-----HG~t~~--a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 211 (457)
T PRK05639 139 RPWILAFIGAY-----HGQTLG--ATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLEN 211 (457)
T ss_pred CCeEEEECCCc-----CCccHH--HHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHH
Confidence 45677765332 332100 001100 0123334321100 000122 23444
Q ss_pred Hhh-----hcCCcEEEEcCCC--CC----CCCCHHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEEC
Q 016668 246 TAI-----LFRPKLIIAGASA--YP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTT 311 (385)
Q Consensus 246 ~i~-----~~~pklIi~~~s~--~~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S 311 (385)
.+. ..+...||+.+.. .+ ...-+++|+++|+++|+++|+|+.|. |+.-.|.. ..-++ ..|+++
T Consensus 212 ~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~GrtG~~~a~~~~gv~PDiv~-- 288 (457)
T PRK05639 212 YVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT-GIGRTGKWFASEWFEVKPDLII-- 288 (457)
T ss_pred HHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcCchHHHHHhcCCCCCEEE--
Confidence 432 1234567775421 12 12238999999999999999999995 65323321 11122 468888
Q ss_pred CCccCc-cccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 312 THKSLR-GPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 312 ~hK~l~-GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
+.|.+. |...|.+++++ ++.+......+ .+.+ .++...++..++|+.+.++++.
T Consensus 289 ~gK~l~gG~pi~av~~~~------~i~~~~~~~~~-~T~~-g~p~~~aaa~a~l~~l~~~~l~ 343 (457)
T PRK05639 289 FGKGVASGMGLSGVIGRK------ELMDLTSGSAL-LTPA-ANPVISAAAEATLEIIEEENLL 343 (457)
T ss_pred echhhcCCCcceeEEehH------HHHhhcCCCcc-cCCC-cCHHHHHHHHHHHHHHHHccHH
Confidence 579995 44457777777 45552222222 2333 3344455555578777666653
No 365
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.35 E-value=4.9e-06 Score=86.16 Aligned_cols=159 Identities=20% Similarity=0.202 Sum_probs=107.0
Q ss_pred HHHHHHHHHcCCCCCCCcceeecCCcHHH---HHHHHHHhc-cCCC----EEeecCCCCCccccCCccccccccccCcce
Q 016668 152 LCQKRALAAFNLDENKWGVNVQPLSGSPA---NFEVYTAIL-KPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (385)
Q Consensus 152 ~~~~~la~lfg~~~~~~~~~V~~~sGs~A---~~~a~~all-~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~ 223 (385)
...+++.++.|.|. +.+|+.||.++ -+.++.+.+ .+|+ ..+++-..||-++. .+.++|.+
T Consensus 586 ~Le~~Lc~iTG~D~----~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPA--------SA~Magmk 653 (1001)
T KOG2040|consen 586 ELEKDLCEITGFDS----FSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPA--------SAAMAGMK 653 (1001)
T ss_pred HHHHHhheeecccc----eeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChh--------hHHhcCCE
Confidence 34668999999987 57899999864 344556654 3443 34555555554432 33466764
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCc--EEEEcCC-CCC-CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPK--LIIAGAS-AYP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pk--lIi~~~s-~~~-~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
+++++.+ .+|.||+.+|+..+++++-+ .+.+.+| .++ ...+++++.++.++||--+..|+|.....+ | .-
T Consensus 654 --vvpV~~~-~~G~id~~dLk~kaekh~~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqV--G-lc 727 (1001)
T KOG2040|consen 654 --VVPVGCD-ANGNIDMVDLKAKAEKHKDNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQV--G-LC 727 (1001)
T ss_pred --EEEeecc-CCCCccHHHHHHHHHHhhhhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcccee--c-cc
Confidence 5555565 47899999999998765433 3444444 455 566899999999999999999988643222 1 12
Q ss_pred CCCC-CCcEEEECCCccCcc------ccEEEEEEeC
Q 016668 300 DPFK-YCDVVTTTTHKSLRG------PRGGMIFFKK 328 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~G------prgG~I~~~~ 328 (385)
.|-+ |+|+.--.+||||.= |-+|-|..++
T Consensus 728 ~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~ 763 (1001)
T KOG2040|consen 728 RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK 763 (1001)
T ss_pred CCccccccceeecccceeeecCCCCCCCCCccchhh
Confidence 4555 899999999999843 4345565555
No 366
>PRK07483 hypothetical protein; Provisional
Probab=98.34 E-value=5.1e-05 Score=77.98 Aligned_cols=125 Identities=18% Similarity=0.148 Sum_probs=71.8
Q ss_pred HHHHHHhhh---cCCcEEEEcCCC--C-CC----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcE
Q 016668 241 DMLEKTAIL---FRPKLIIAGASA--Y-PR----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDV 307 (385)
Q Consensus 241 d~le~~i~~---~~pklIi~~~s~--~-~~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDi 307 (385)
+++++.+.. .+...|++.+.. . +. ..-+++++++|+++|+++|.|+.+. |+.-.|... .-+. ..|+
T Consensus 186 ~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfGRtG~~~a~~~~gv~PDi 264 (443)
T PRK07483 186 DELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMC-GMGRTGTLFACEEDGVAPDL 264 (443)
T ss_pred HHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEeccee-CcccCcHHHHHhhcCCCCCe
Confidence 566665532 234567776432 1 21 1238999999999999999999984 542233211 1122 4688
Q ss_pred EEECCCccCc-cc-cEEEEEEeCCCCchhHHHHHHhhcc---CC-CccCCChHHHHHHHHHHHHHhhCchHHHH
Q 016668 308 VTTTTHKSLR-GP-RGGMIFFKKDPVLGVELESAINNAV---FP-GLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (385)
Q Consensus 308 v~~S~hK~l~-Gp-rgG~I~~~~~~~~~~~~~~~i~~~~---fp-~~qg~p~~~~iaala~Al~e~~~~~~~~y 375 (385)
+++ .|.+. |. ..|.+++++ ++.+.+.... +. .+++ .++...++..++++.+.++++.+.
T Consensus 265 v~~--gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~h~~T~~-gnpl~~aaa~a~l~~i~~~~l~~~ 329 (443)
T PRK07483 265 VTI--AKGLGAGYQPIGAVLASD------RIYDAIADGSGFFQHGHTYL-GHATACAAALAVQRVIAEDGLLAN 329 (443)
T ss_pred eee--hhhhccCccccEEEEEcH------HHHHHHhcCCCccccCCCCC-CCHHHHHHHHHHHHHHHhcCHHHH
Confidence 877 49984 42 466677776 5666664321 12 2232 334445555557777766665433
No 367
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.33 E-value=1.1e-05 Score=88.76 Aligned_cols=151 Identities=16% Similarity=0.147 Sum_probs=95.9
Q ss_pred HHHHHHHHcCCCCCCCcceeecC-CcHHHHHHHHHHh-c--cCCCEEeecCCCCCccccCCccccccccccCcceEEEEe
Q 016668 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-L--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~-sGs~A~~~a~~al-l--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~ 228 (385)
.+..++++.|.+.. |.... .+|.+..+++++. . +++++|++++..|..+. .+.. ..+...|. +++.
T Consensus 114 ~Qt~i~eLtGm~~a----NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~---~v~~-t~a~~~g~--~v~~ 183 (939)
T TIGR00461 114 FQTVVSDLTGLPVA----NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTK---SVLH-TRAKPFGI--EVIV 183 (939)
T ss_pred HHHHHHHHHCCChh----hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchH---HHHH-HHHHhcCc--EEEE
Confidence 57789999999973 33333 3444555555554 2 34589999886553221 1000 01234444 3332
Q ss_pred ccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc
Q 016668 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (385)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD 306 (385)
+|+++|++.+ +...+++.+|+ +|...|+++|.+++|++|++++++.-..+. .....|-+ |+|
T Consensus 184 ---------~~~~~l~~~~---~~~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al----~ll~~Pge~GaD 247 (939)
T TIGR00461 184 ---------VDCSDIKKAV---DVFGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL----TLLTPPGHYGAD 247 (939)
T ss_pred ---------EcHHHHhhcC---CEEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh----CCcCCHHHcCCc
Confidence 2455666554 24566665555 577779999999999999999997544322 22345556 999
Q ss_pred EEEECCCcc-----CccccEEEEEEeCC
Q 016668 307 VVTTTTHKS-----LRGPRGGMIFFKKD 329 (385)
Q Consensus 307 iv~~S~hK~-----l~GprgG~I~~~~~ 329 (385)
|++++.+++ ++||..|++.++++
T Consensus 248 i~vg~~q~fg~p~g~GGP~aG~~a~~~~ 275 (939)
T TIGR00461 248 IVLGSSQRFGVPMGYGGPHAAFFAVKDE 275 (939)
T ss_pred EEeeCCCccCCCCCCCCCceeeeeecHh
Confidence 998877775 35899999999885
No 368
>PRK07036 hypothetical protein; Provisional
Probab=98.31 E-value=0.00016 Score=74.76 Aligned_cols=122 Identities=18% Similarity=0.141 Sum_probs=70.0
Q ss_pred HHHHHHhhh---cCCcEEEEcCCC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCc-c--cCCCC-CCcE
Q 016668 241 DMLEKTAIL---FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-V--ADPFK-YCDV 307 (385)
Q Consensus 241 d~le~~i~~---~~pklIi~~~s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~--~~p~~-gaDi 307 (385)
+.+++.+.. .++..||+.+.. .+...+ +++|+++|++||+++|+|+.+ .|+.-.|. + ..-+. ..|+
T Consensus 207 ~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~-tGfGRtG~~~~~~~~~gv~PDi 285 (466)
T PRK07036 207 DEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVV-TGFGRLGHFFASEAVFGIQPDI 285 (466)
T ss_pred HHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeech-hCCCcCchhhhhhhhcCCCCCE
Confidence 345555532 234567776431 222222 899999999999999999998 34422221 1 11122 4688
Q ss_pred EEECCCccCccc--cEEEEEEeCCCCchhHHHHHHhhc-----c-CCC-ccCCChHHHHHHHHHHHHHhhCchH
Q 016668 308 VTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINNA-----V-FPG-LQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 308 v~~S~hK~l~Gp--rgG~I~~~~~~~~~~~~~~~i~~~-----~-fp~-~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+++ .|.+.|- ..|.+++++ ++.+.+... . ..+ +.+ .++...++....|+.+.++++
T Consensus 286 vt~--gK~l~gG~~Pi~av~~~~------~i~~~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~Le~i~~~~l 350 (466)
T PRK07036 286 ITF--AKGLTSGYQPLGAVIISE------RLLDVISGPNAKGNVFTHGFTYS-GHPVACAAALKNIEIMEREGL 350 (466)
T ss_pred EEE--ccccccCccccEEEEEcH------HHHHHHhcccCcCcccccCCCCC-CCHHHHHHHHHHHHHHHhCCH
Confidence 766 5998542 455666776 566665421 1 122 223 344556666667777766655
No 369
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.29 E-value=0.00016 Score=74.59 Aligned_cols=99 Identities=16% Similarity=0.214 Sum_probs=57.6
Q ss_pred HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 268 l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+++++++|+++|+++|.|+.+ .|+.-.|... ..+. ..|+++++ |.+. |...|.+++++ ++ +.+...
T Consensus 248 l~~lr~lc~~~g~LlI~DEV~-tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~Pi~av~~~~------~~-~~~~~~ 317 (459)
T PRK06931 248 LQKIREVTQKHGILLIVDEVQ-AGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLPLAVLGIKK------EF-DAWQPG 317 (459)
T ss_pred HHHHHHHHHHcCCEEEEecch-hcCCcCchHHHhhhcCCCCCEEEec--ccccCCcceeeeeeHH------HH-hhccCC
Confidence 899999999999999999997 4542223211 1122 46888774 9884 43445566655 33 333222
Q ss_pred cCCCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 344 VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 344 ~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
...++++ .++...++....|+.+.++++.++++
T Consensus 318 ~~~~T~~-gnpla~aaala~L~~l~~~~l~~~~~ 350 (459)
T PRK06931 318 GHTGTFR-GNQLAMATGLTTLKILKEENLAQNAA 350 (459)
T ss_pred CCCCCCC-CCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 2222333 33444555555777666666544443
No 370
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.25 E-value=4.4e-05 Score=76.15 Aligned_cols=156 Identities=19% Similarity=0.192 Sum_probs=100.7
Q ss_pred HHHHHHHHcCCCCCCCcceeecC-CcHHHHHHHHHHh-cc--CCCEEeecCCCCCccccCCccccccccccCcceEEEEe
Q 016668 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~-sGs~A~~~a~~al-l~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~ 228 (385)
.+..++++.|.+-+ |-... .+|.+-.++.++. .. +.++++++.-.|.-++. +. .-...+..++++.
T Consensus 125 fQtlv~dLTGm~VA----NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~---Vl---~Tra~~~g~~i~~ 194 (450)
T COG0403 125 FQTLVADLTGLDVA----NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLD---VL---RTRAEGLGIEIEV 194 (450)
T ss_pred HHHHHHHHhCCCcc----cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHH---HH---HhhcccCceEEEE
Confidence 46678999999874 33333 3455556665555 32 36899988754433322 10 1112333344444
Q ss_pred ccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CC-CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CC
Q 016668 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YP-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YC 305 (385)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~-~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-ga 305 (385)
++.+ |.+++++. ....+-.+++.+|+ +| ...|+++|.+++|++|+++++=. ..++-+....|-+ |+
T Consensus 195 ~~~~------d~~~l~~~-~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~a----DplaL~LL~pPGe~GA 263 (450)
T COG0403 195 VDAD------DLDDLESA-DDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAA----DPLALGLLKPPGEFGA 263 (450)
T ss_pred eccc------hhhhhhhc-cccCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEe----chhHhhccCCccccCC
Confidence 3332 77777776 44345678888776 46 56689999999999999888632 2222233445666 99
Q ss_pred cEEEECCCcc-----CccccEEEEEEeCC
Q 016668 306 DVVTTTTHKS-----LRGPRGGMIFFKKD 329 (385)
Q Consensus 306 Div~~S~hK~-----l~GprgG~I~~~~~ 329 (385)
||++++++-. |+||..|++.++++
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~ 292 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDE 292 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHh
Confidence 9999999963 68899999999986
No 371
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.21 E-value=0.00013 Score=70.70 Aligned_cols=194 Identities=15% Similarity=0.183 Sum_probs=107.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
..|.+++++.++...-+- .++-+| ..+--...+.+.++||-+. .+...+|.+|+..++.-.-
T Consensus 76 chpki~~aLqeq~~kLtl---ssrafY------nd~~~~f~~~vt~lf~~~k-----vlpmnTGaEa~Eta~KLaR~wgy 141 (427)
T KOG1402|consen 76 CHPKIIKALQEQADKLTL---SSRAFY------NDVLGEFAEYVTKLFGYDK-----VLPMNTGAEAVETACKLARKWGY 141 (427)
T ss_pred CCHHHHHHHHHHHhHhhh---hhHHHh------hhhHHHHHHHHHHhcCcce-----eeecccchhHHHHHHHHHHHHHH
Confidence 378999999888764332 122222 1222234567899999986 2345678889998875432
Q ss_pred --c--CCCEEeecCCCCCccccCCccccccccccCcce-------------EEEEeccccCCCCCCCHHHHHHHhhhcCC
Q 016668 190 --K--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-------------FESMPYRLDESTGLVDYDMLEKTAILFRP 252 (385)
Q Consensus 190 --~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-------------~~~i~~~~~~~~~~iD~d~le~~i~~~~p 252 (385)
+ |.|+-.++.-. + .+ ||.-. ..+++.+.. ++.++ .-|.++|+..++..+.
T Consensus 142 ~~K~ip~nka~il~~~-~-nF-hGrT~--~ais~s~d~ds~~~fgp~~P~~~~~v~--------Y~d~eale~~l~~~~v 208 (427)
T KOG1402|consen 142 RKKNIPKNKAKILSAE-N-NF-HGRTL--GAISLSTDPDSWDGFGPFLPGVVDKVP--------YGDAEALEVALKSPNV 208 (427)
T ss_pred hhccCCccceeEEEec-c-cc-cCcee--eeEEecCCcchhhccCCCCCCcceeec--------cCCHHHHHHHhcCCCe
Confidence 2 54543333211 1 11 22210 112222111 12222 2377888988876455
Q ss_pred cEEEEcCCC------CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc-CCCC--CCcEEEECCCccCccc--cE
Q 016668 253 KLIIAGASA------YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSLRGP--RG 321 (385)
Q Consensus 253 klIi~~~s~------~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~p~~--gaDiv~~S~hK~l~Gp--rg 321 (385)
..+++.+.- .|.+.=+++.+++|++|+.++|.|+.| .|+--.|.+- ...+ .-|++... |.|.|- .-
T Consensus 209 aaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQ-TGl~RTGk~la~d~env~PDivilg--KalSGG~~Pv 285 (427)
T KOG1402|consen 209 AAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQ-TGLARTGKLLACDYENVRPDIVILG--KALSGGVYPV 285 (427)
T ss_pred eEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhh-hcccccCcEEEeehhhcCCCeEEEe--ccccCCeeee
Confidence 556664321 233334899999999999999999999 5765455321 1122 45877654 877552 23
Q ss_pred EEEEEeCCCCchhHHHHHHhhc
Q 016668 322 GMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~ 343 (385)
..+++.+ ++...++..
T Consensus 286 savl~~~------~im~~~~pg 301 (427)
T KOG1402|consen 286 SAVLADD------DIMLNIKPG 301 (427)
T ss_pred EEEEecH------HHHhccCCC
Confidence 3455555 455445433
No 372
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.20 E-value=1.6e-05 Score=78.38 Aligned_cols=192 Identities=21% Similarity=0.238 Sum_probs=125.1
Q ss_pred cCCCCC----cHHHHHHHhhHhhccCCCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 109 ASENFT----SRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 109 asen~~----s~~V~~al~s~l~~~y~~g~p~~r-~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
+|.|+. ++.+.+.....+ .+|.-|.-|-| +|+-.+....+| +++++++|++.+ +...-|-.++.-
T Consensus 100 aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE----~~iakF~G~E~a-----ivYs~gF~ti~S 169 (467)
T KOG1358|consen 100 ASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLE----KRIAKFMGTEDA-----IVYSYGFSTIES 169 (467)
T ss_pred cchhhhhhcccHHHHHHHHHHH-HHhCCCCcCCCcccccceeecccH----HHHHHhhCCcce-----eeeccccchhhh
Confidence 777876 778888777665 46765655544 554333333455 479999999984 456667778888
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc------CCc----
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPK---- 253 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~------~pk---- 253 (385)
++.++.+.||.|.+.+- .++. .+ +.+.++-- ....+. +.|++++++.+.+. +||
T Consensus 170 ~ipafsKrGDIi~~de~---~nfa--Iq---~GlqlSRS--~i~~Fk------hndm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 170 AIPAFSKRGDIIFVDEA---VNFA--IQ---KGLQLSRS--TISYFK------HNDMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred cchhhhccCcEEEEehh---hhHH--HH---HHHhhhhh--eeEEec------CCCHHHHHHhccCcchhhhhccccccc
Confidence 89999999999988653 2211 00 11111111 122222 45778887665321 122
Q ss_pred --EEEEc--CCCCCCCCCHHHHHHHHHHcCcEEEEecccccccccc-C--c--c-cCCCCCCcEEEECCCccCccccEEE
Q 016668 254 --LIIAG--ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-S--V--V-ADPFKYCDVVTTTTHKSLRGPRGGM 323 (385)
Q Consensus 254 --lIi~~--~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g--~--~-~~p~~gaDiv~~S~hK~l~GprgG~ 323 (385)
.|++. ..++|...++.+|.++..|+...++.|++...|.... | . + ..+.+..|++++|+.-.++ ..||+
T Consensus 234 Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~ala-s~GgF 312 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALA-SGGGF 312 (467)
T ss_pred eEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeeccccccc-ccCce
Confidence 34554 3578899999999999999999999999999887653 2 1 1 1233467899999877764 45666
Q ss_pred EEEe
Q 016668 324 IFFK 327 (385)
Q Consensus 324 I~~~ 327 (385)
..++
T Consensus 313 c~G~ 316 (467)
T KOG1358|consen 313 CAGK 316 (467)
T ss_pred eecc
Confidence 6664
No 373
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.20 E-value=4.8e-06 Score=82.69 Aligned_cols=172 Identities=18% Similarity=0.177 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc---cCC----------CEEeecCCCCCccccCCccccc
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---KPH----------DRIMGLDLPHGGHLSHGFMTPK 214 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---~pG----------D~Vl~~~~~~ggh~s~~~~~~~ 214 (385)
..|...-.+..++.|-+.. +-.++..+|+.+|..++.+.- -|+ +-|+..+- .+|.|- .
T Consensus 141 lmE~~vl~km~~ivGw~~~--~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSe--esHYSi-----~ 211 (510)
T KOG0629|consen 141 LMEEEVLAKMREIVGWEEG--GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSE--ESHYSI-----K 211 (510)
T ss_pred eehHHHHHHHHHHhCCCCC--CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecc--cchhhH-----H
Confidence 3454455567777787763 235777889888887765441 122 34444432 355542 1
Q ss_pred cccccCcce-EEEEeccccCCCCCCCHHHHHHHhhhcC-----CcEEEE--cCCCCCCCCCHHHHHHHHHHcCcEEEEec
Q 016668 215 RRVSGTSIY-FESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIA--GASAYPRDFDYPRMRQIADAVGALLMMDM 286 (385)
Q Consensus 215 ~~~~~~g~~-~~~i~~~~~~~~~~iD~d~le~~i~~~~-----pklIi~--~~s~~~~~~dl~~I~~ia~~~ga~livD~ 286 (385)
+...+.|.. ...+.++.+ +.|.+++++||+.+.+.+ |-+|-+ |.+.+|---|++.|+++|++|+.|+++|+
T Consensus 212 kaAa~lg~gtd~c~~v~t~-e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvDA 290 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTD-ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMHVDA 290 (510)
T ss_pred HHHHHhccCCceeEEeccc-ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEEeec
Confidence 233445532 123333344 578999999999985533 444433 34456767799999999999999999999
Q ss_pred cccccccccCcccCCC---CCCcEEEECCCccCccc-cEEEEEEeCC
Q 016668 287 AHISGLVAASVVADPF---KYCDVVTTTTHKSLRGP-RGGMIFFKKD 329 (385)
Q Consensus 287 ah~~Gli~~g~~~~p~---~gaDiv~~S~hK~l~Gp-rgG~I~~~~~ 329 (385)
|++-|+.........+ +.+|-++-+.||.+..| +.+.++++.+
T Consensus 291 AwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~ 337 (510)
T KOG0629|consen 291 AWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREE 337 (510)
T ss_pred ccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHH
Confidence 9977776543322233 36889999999998766 5566666554
No 374
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.14 E-value=0.0002 Score=73.91 Aligned_cols=125 Identities=12% Similarity=0.082 Sum_probs=69.0
Q ss_pred CHHHHHHHhhhc--CCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--C--CCC-CC
Q 016668 239 DYDMLEKTAILF--RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--D--PFK-YC 305 (385)
Q Consensus 239 D~d~le~~i~~~--~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~--p~~-ga 305 (385)
+++.+++.++.. +...||+.+. ..+...+ +++++++|+++|++||+|+.| .|+.-.|... . .+. ..
T Consensus 237 ~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~-tGfGrtG~~fa~e~~gv~~~P 315 (464)
T TIGR00699 237 CLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGVGATGKFWAHEHWNLDDPP 315 (464)
T ss_pred HHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeee-eCCCCCcchhHHHhcCCCCCC
Confidence 456677777542 3456777542 1233333 899999999999999999998 5653333211 1 111 37
Q ss_pred cEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 306 DVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 306 Div~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
|++++ .|.+.| ||+++.++ .+.. . ...+.+..-+.++...++..++|+.+.++++.+.+
T Consensus 316 Di~t~--gK~lg~--gG~~~~~~------~~~~-~-~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~ 374 (464)
T TIGR00699 316 DMVTF--SKKFQT--AGYFFHDP------AFRP-N-KPYRQFNTWMGDPSRALILREIIQEIKRKDLLENV 374 (464)
T ss_pred CEEEe--hhhhcc--CCccccch------hccC-C-CCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 88665 598731 24443332 1110 0 11112222234555566656678777766654333
No 375
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.01 E-value=4.6e-05 Score=76.56 Aligned_cols=230 Identities=15% Similarity=0.076 Sum_probs=128.5
Q ss_pred CCCcHHHHHHHHHHHHHHHHHcCCCCC------CCcceeecCCcHHHHHHHHHHh-------ccCC-----------CEE
Q 016668 140 YGGNEYIDELETLCQKRALAAFNLDEN------KWGVNVQPLSGSPANFEVYTAI-------LKPH-----------DRI 195 (385)
Q Consensus 140 ~~G~~~~~~le~~~~~~la~lfg~~~~------~~~~~V~~~sGs~A~~~a~~al-------l~pG-----------D~V 195 (385)
...++...+||....+|+.++++++.. .-|.-|...|.|++++.++.+. ++.+ +-|
T Consensus 105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV 184 (511)
T KOG0628|consen 105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLV 184 (511)
T ss_pred eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhhe
Confidence 335677889999999999999988641 1123455667778877776543 1222 223
Q ss_pred eecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcC-----CcEEEEcCCC-CC-CCCCH
Q 016668 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASA-YP-RDFDY 268 (385)
Q Consensus 196 l~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~-----pklIi~~~s~-~~-~~~dl 268 (385)
+..+ -.+|.++. +..-..+.+.+.++ .|. +..++.+.|+++++++. |-.|+.+.-. .. -.-++
T Consensus 185 ~Y~S-----Dqahssve--ka~~i~~VklR~l~--td~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l 254 (511)
T KOG0628|consen 185 AYCS-----DQAHSSVE--KACLIAGVKLRALP--TDE-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDEL 254 (511)
T ss_pred EEec-----CcccchHH--HhHhhcceeEEEee--ccc-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccH
Confidence 3222 12233221 22233444444444 443 67899999999997643 4444443221 22 23469
Q ss_pred HHHHHHHHHcCcEEEEeccccccccc-cCccc---CCCCCCcEEEECCCccCcc-ccEEEEEEeCCCC--------chhH
Q 016668 269 PRMRQIADAVGALLMMDMAHISGLVA-ASVVA---DPFKYCDVVTTTTHKSLRG-PRGGMIFFKKDPV--------LGVE 335 (385)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gli~-~g~~~---~p~~gaDiv~~S~hK~l~G-prgG~I~~~~~~~--------~~~~ 335 (385)
++|..+|+++|+||++|+|+ +|-.+ -..+. .-++++|-+.+..|||+.. .....++.++... .+|-
T Consensus 255 ~elg~Vc~~~glWLHVDAAY-AGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL 333 (511)
T KOG0628|consen 255 EELGPVCREEGLWLHVDAAY-AGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYL 333 (511)
T ss_pred HHhcchhhhcCEEEEeehhh-ccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhh
Confidence 99999999999999999996 44322 11111 2234788899999999733 3455566666511 1111
Q ss_pred HHHHHhhccCCCccCCChHHHHHHHHH--HHHHhhCchHHHHHHHHh
Q 016668 336 LESAINNAVFPGLQGGPHNHTIGGLAV--CLKHAQSPEFKVYQNKSA 380 (385)
Q Consensus 336 ~~~~i~~~~fp~~qg~p~~~~iaala~--Al~e~~~~~~~~y~~~v~ 380 (385)
-.+......-.....=|....+-+|-+ .++.+-.+.+++|.++-+
T Consensus 334 ~h~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~ 380 (511)
T KOG0628|consen 334 KHAYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHV 380 (511)
T ss_pred cchhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHH
Confidence 112222222111112234444444433 444555566677776654
No 376
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=97.99 E-value=0.00012 Score=72.30 Aligned_cols=101 Identities=20% Similarity=0.227 Sum_probs=66.0
Q ss_pred HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--C--CcEEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y--CDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 268 l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--g--aDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
++++.++|+++|.++|.|++| .|+--.| ...-|+ + -|++ |..|.+ .|..-|.+++.+ ++.+.+++
T Consensus 235 lka~~~~v~k~Ggl~IaDEVq-tGfGRtG-~~wgfe~h~v~PDIv--TmAKgiGnG~Pl~AVvtt~------EIa~v~~~ 304 (442)
T KOG1404|consen 235 LKAAYKVVRKRGGLFIADEVQ-TGFGRTG-HMWGFESHGVVPDIV--TMAKGIGNGFPLGAVVTTP------EIADVLNQ 304 (442)
T ss_pred HHHHHHHHHHcCCEEEehhhh-hcccccc-ccccccccCCCccHH--HHHhhccCCCcceeeecCH------HHHHHHHh
Confidence 899999999999999999998 4544344 223344 2 2555 456988 455556677766 68888877
Q ss_pred cc-CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 343 AV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 343 ~~-fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
.. +..+.|+......++++ .|+-+.++..++++..|
T Consensus 305 ~~~~fnTyggnP~a~avg~a-VL~Vikee~LqE~aa~v 341 (442)
T KOG1404|consen 305 KSSHFNTYGGNPVACAVGLA-VLKVIKEENLQENAAEV 341 (442)
T ss_pred ccccccccCCCchhHHHHHH-HHHHHHHHhHHHHHHHH
Confidence 65 34444444444444444 56666666667777655
No 377
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.98 E-value=0.0004 Score=71.13 Aligned_cols=123 Identities=15% Similarity=0.077 Sum_probs=66.5
Q ss_pred HHHHHHHhhh--cCCcEEEEcCC--CCC----CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEE
Q 016668 240 YDMLEKTAIL--FRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVV 308 (385)
Q Consensus 240 ~d~le~~i~~--~~pklIi~~~s--~~~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv 308 (385)
++++++.+.. .++..|++.+. ..+ ....+++|+++|+++|+++|+|+.|. |+...|... ..++ ..|++
T Consensus 205 l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~t-G~GrtG~~~a~~~~gv~PDi~ 283 (431)
T TIGR03251 205 LRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVQPDIV 283 (431)
T ss_pred HHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchh-ccCccchHHHHHhcCCCCCEE
Confidence 4555556642 24556777532 112 22358999999999999999999985 554333211 1123 46888
Q ss_pred EECCCccCccccEEEEEEeCCCCchhHHHHHH-h-hccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 309 TTTTHKSLRGPRGGMIFFKKDPVLGVELESAI-N-NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 309 ~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i-~-~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+. .|.+ |-+|++..++- .++...+ . ......+.+ .++...++..++++.+.++++
T Consensus 284 ~~--gK~~--~~~g~~~~~~i----~~~~~~~~~~~~~~~~T~~-gnpl~~aaa~a~L~~l~~~~l 340 (431)
T TIGR03251 284 AF--GKKT--QVCGIMAGRRV----DEVADNVFAVPSRLNSTWG-GNLVDMVRATRILEIIEEERL 340 (431)
T ss_pred Ee--cccC--ccceEEecchH----HHhhhhcccCccccCCCCC-CCHHHHHHHHHHHHHHHhcCH
Confidence 75 5765 55677655430 0111111 1 011122232 234445555557777665554
No 378
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.98 E-value=0.00047 Score=68.56 Aligned_cols=238 Identities=18% Similarity=0.152 Sum_probs=124.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
..|+|.+++...+. +..+...+ ++ -.+ .++ +.+.+.+..+-...+ -..++.|||+||..++....+
T Consensus 73 anpev~ral~~q~~-k~~hs~~~--~~-t~e---av~--l~~~l~~~~~~~~~~--rvff~nsGTeAne~ALK~Ark~~~ 141 (433)
T KOG1401|consen 73 ANPEVARALAEQAK-KLGHSSNG--YF-TLE---AVE--LEEVLSAVLGKGSAE--RVFFCNSGTEANETALKFARKFTG 141 (433)
T ss_pred CCHHHHHHHHHHHh-hheeccCc--cc-cHH---HHH--HHHHHHhcccCCCcc--EEEEecCCcHHHHHHHHHHHHhhc
Confidence 37888888876653 33221111 11 112 222 344555555322211 134567999999999864422
Q ss_pred ---CCC--EEeecCCCCCccccCCccccccccccCcceEEEEeccccCC--C-CCCCHHHHHHHhhhcC--CcEEEEcCC
Q 016668 191 ---PHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--T-GLVDYDMLEKTAILFR--PKLIIAGAS 260 (385)
Q Consensus 191 ---pGD--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~--~-~~iD~d~le~~i~~~~--pklIi~~~s 260 (385)
|-+ +++...-.|-|+. .+.... ...+..+..++.+ .++ + ..-|..+++++++.++ ...||+.+.
T Consensus 142 ~~~~~~~t~~Iaf~nsyHG~t-lgals~-~~~s~y~~~~~p~----~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPi 215 (433)
T KOG1401|consen 142 KKHPEKKTKFIAFENSYHGRT-LGALSV-TGNSKYGLPFDPI----APDVVTAEYNDSTALEKLFESHKGEIAAVIVEPI 215 (433)
T ss_pred ccCCccceeEEEEecCcCCcc-hhHHHh-hcccccCCCCCCC----CCceeecccCCHHHHHHHHHhCCCceEEEEEecc
Confidence 223 3776653332221 011000 0111112211111 111 1 1357899999998765 345666542
Q ss_pred C-CC-----CCCCHHHHHHHHHHcCcEEEEeccccccccccCc--ccCCCC-CCcEEEECCCccCc-cccEEEEEEeCCC
Q 016668 261 A-YP-----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASV--VADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 330 (385)
Q Consensus 261 ~-~~-----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~--~~~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~ 330 (385)
. .+ .+.-+..|+++|+++|++||.|+.+. |+.-.|. ....+. .-|+.|.. |-|. |...|...+++
T Consensus 216 qGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t-G~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPigA~~v~~-- 290 (433)
T KOG1401|consen 216 QGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT-GLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPIGATGVRD-- 290 (433)
T ss_pred cCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh-CccccchHHHHHHhCcCCcceeeh--hhccCCceeEEEeehH--
Confidence 1 11 12236788999999999999999974 4322221 112222 34776544 8884 45667777777
Q ss_pred CchhHHHHHHhhccC--CCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 331 VLGVELESAINNAVF--PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 331 ~~~~~~~~~i~~~~f--p~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
++.+.|+..-. .+..=+-+.....+-..+++++.++++.++..
T Consensus 291 ----kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs 335 (433)
T KOG1401|consen 291 ----KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVS 335 (433)
T ss_pred ----HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHH
Confidence 58888765432 11111233445555567888999888865543
No 379
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.97 E-value=2.9e-05 Score=77.28 Aligned_cols=192 Identities=16% Similarity=0.153 Sum_probs=107.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cCCCEEeecCCCCCccccCCcccccccccc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
|...+-+|-.....-+.+..|+.... .+.+.|...-..+..++.++- ..++.|+.+...| .+ ..+.+..
T Consensus 50 Gss~~~~ltn~l~~d~~~~~G~~~~~-~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridq---kS-----c~kai~~ 120 (389)
T PF05889_consen 50 GSSLLAKLTNSLVLDALRLAGLRSVK-SCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQ---KS-----CFKAIER 120 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHTTHC-EEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEET---HH-----HHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCcccc-ceEEEecccccHHHHHHHHHhcccCCceEEEeeccc---cc-----hHHHHHh
Confidence 55444445544444566778987531 134444332235555666663 4577787766533 22 1145667
Q ss_pred CcceEEEEeccccCCCCCCCHHHHHHHhhhcCC--cEEEEcCC--CCCCCCC-HHHHHHHHHHcCcEEEEeccccccccc
Q 016668 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGAS--AYPRDFD-YPRMRQIADAVGALLMMDMAHISGLVA 294 (385)
Q Consensus 220 ~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~p--klIi~~~s--~~~~~~d-l~~I~~ia~~~ga~livD~ah~~Gli~ 294 (385)
+|..+.+++-...++.-..|.+.+|+.+++..+ .+.++..+ .+|+..| +++|+++|+++|+..++.+|++.--..
T Consensus 121 AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~ 200 (389)
T PF05889_consen 121 AGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSK 200 (389)
T ss_dssp TT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HH
T ss_pred cCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHH
Confidence 787776666434433346789999999876443 34444433 3677777 999999999999999999997550000
Q ss_pred -cCcccCCC--CCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccCCC
Q 016668 295 -ASVVADPF--KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG 347 (385)
Q Consensus 295 -~g~~~~p~--~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~ 347 (385)
-....... ...|+++.|+-|.|--|-||.+++..+. .....+.. .||+
T Consensus 201 ~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~----~~i~~vs~-~YpG 251 (389)
T PF05889_consen 201 CMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDP----SGILAVSK-EYPG 251 (389)
T ss_dssp HHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSH----HHHHHHHH-TSHS
T ss_pred HHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCH----HHHHHHHH-Hhhh
Confidence 00000011 1468999999999988888655554441 45555543 3444
No 380
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.84 E-value=0.00086 Score=68.98 Aligned_cols=83 Identities=18% Similarity=0.129 Sum_probs=51.0
Q ss_pred HHHHHHHhhh--cCCcEEEEcCC--CCC----CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEE
Q 016668 240 YDMLEKTAIL--FRPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVV 308 (385)
Q Consensus 240 ~d~le~~i~~--~~pklIi~~~s--~~~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv 308 (385)
++++++.+.. .++..||+.+. ..+ ....+++|+++|+++|+++|.|+.+. |+.-.|... .-++ ..|++
T Consensus 212 ~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~t-GfGRtG~~~a~~~~gv~PDiv 290 (443)
T PRK08297 212 LAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQT-GVGLTGTAWAYQQLGVRPDIV 290 (443)
T ss_pred HHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh-ccCccchHHHHHhcCCCCCEE
Confidence 4556666653 24567777532 112 22358999999999999999999984 542233211 1122 46888
Q ss_pred EECCCccCccccEEEEEEe
Q 016668 309 TTTTHKSLRGPRGGMIFFK 327 (385)
Q Consensus 309 ~~S~hK~l~GprgG~I~~~ 327 (385)
++ .|.+ |-+|++.++
T Consensus 291 ~~--gK~l--~~~a~l~~~ 305 (443)
T PRK08297 291 AF--GKKT--QVCGIMAGR 305 (443)
T ss_pred Ee--cccc--cccceecch
Confidence 64 6987 345666544
No 381
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.81 E-value=0.0017 Score=71.43 Aligned_cols=122 Identities=16% Similarity=0.094 Sum_probs=70.9
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--C-CCCC----CCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-
Q 016668 241 DMLEKTAIL-------FRPKLIIAGAS--A-YPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK- 303 (385)
Q Consensus 241 d~le~~i~~-------~~pklIi~~~s--~-~~~~----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~- 303 (385)
+.+++.++. .+...||+.+. . .+.. .-+++++++|+++|++||.|+.+ .|+.-.|... .-+.
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~-TGfGRtG~~fa~e~~gv 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVF-TGLWRLGVESAWELLGC 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecc-cCCCcccchhhHHhcCC
Confidence 556666642 23456676652 1 2322 22799999999999999999997 5653233211 1122
Q ss_pred CCcEEEECCCccCccc--cEEEEEEeCCCCchhHHHHHHhh-----ccCCCccCCChHHHHHHHHHHHHHhhCch
Q 016668 304 YCDVVTTTTHKSLRGP--RGGMIFFKKDPVLGVELESAINN-----AVFPGLQGGPHNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 304 gaDiv~~S~hK~l~Gp--rgG~I~~~~~~~~~~~~~~~i~~-----~~fp~~qg~p~~~~iaala~Al~e~~~~~ 371 (385)
..|+++++ |.|.|- ..|.+++++ ++.+.+.. ..+.+..=+-|+-..|+-..+|+.+.+++
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~------~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~ 712 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATE------EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPS 712 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcH------HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHccc
Confidence 45888876 988542 456666666 56665531 11222222334455555556787777763
No 382
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.81 E-value=0.00046 Score=67.85 Aligned_cols=238 Identities=13% Similarity=0.122 Sum_probs=128.2
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~-~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
.+.-+.+...+++|++.....+.+-..-|..- .+.+.+-++...+ ..+++.++++|+++.+ +.+.+...++|.+...
T Consensus 7 ~nFsaGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~-~~a~~~lreLl~iPd~-Y~VlflqGGat~qf~~ 84 (365)
T COG1932 7 YNFSAGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVL-EEAEKDLRELLNIPDD-YKVLFLQGGATGQFAM 84 (365)
T ss_pred CCCCCCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHH-HHHHHHHHHHhCCCCC-ceEEEEcCccHHHHHH
Confidence 34456777788999988887776544333321 1222233333334 4478889999999874 5454444555668888
Q ss_pred HHHHhccCCCE--EeecCCCCCccccCCccccccccccCcceEEEEecc-ccC-CCCCCCHHHHHHHhhhcCCcEEEEc-
Q 016668 184 VYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDE-STGLVDYDMLEKTAILFRPKLIIAG- 258 (385)
Q Consensus 184 a~~all~pGD~--Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~-~~~-~~~~iD~d~le~~i~~~~pklIi~~- 258 (385)
+.+.|+.++.. |.. |+.+.- ..+.++..+......... ... -...+|++..+ +.+ +...|..+
T Consensus 85 ~p~nLl~~~~~~yv~~------g~Ws~~---a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-~~ayv~~~~ 152 (365)
T COG1932 85 APMNLLGKRGTDYVDT------GAWSEF---AIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-NDAYVHFCW 152 (365)
T ss_pred HHHhhhcccCceeEee------eehhHh---HHHHHHHhcccccccccceeccCccCCCChhhcc--cCC-CccEEEEec
Confidence 88898866543 432 222211 001222222111111111 111 12245555443 211 22234433
Q ss_pred -CCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHH
Q 016668 259 -ASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVEL 336 (385)
Q Consensus 259 -~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~ 336 (385)
.+..|..++ ..-.+.. +.++++|++- ++.. .+-++..-|+++++.+|.+ ||.| ++++.++ ++
T Consensus 153 NeTi~Gv~v~--~~p~~~~--~~~~v~D~SS--~ils---r~iDvsk~dviyagaQKnl-GpaGltvvIvr~------~~ 216 (365)
T COG1932 153 NETISGVEVP--ELPDIGS--DGLLVADASS--AILS---RPIDVSKYDVIYAGAQKNL-GPAGLTVVIVRP------DL 216 (365)
T ss_pred CCcccceEcc--CCCCCCC--CceEEEeccc--HHhc---CCCChhHcceEEEehhhcc-CccceEEEEEcH------HH
Confidence 233343222 1111222 2899999974 3321 1223336799999999997 6777 7777777 45
Q ss_pred HHHHhhccCCC------------ccCCChHHHHHHHHHHHHHhhCchH
Q 016668 337 ESAINNAVFPG------------LQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 337 ~~~i~~~~fp~------------~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
.+++.....|. +..+|....+.-+..+++-++..+.
T Consensus 217 l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GG 264 (365)
T COG1932 217 LERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGG 264 (365)
T ss_pred HhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCC
Confidence 55554431222 3457888888888888888877655
No 383
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.69 E-value=0.0039 Score=63.64 Aligned_cols=93 Identities=22% Similarity=0.239 Sum_probs=55.2
Q ss_pred HHHHHHHhhhcCCc---EEEEcCCC---CCCC----CCHHHHHHHHHHcCcEEEEeccccccccccCccc-C-CCC-CCc
Q 016668 240 YDMLEKTAILFRPK---LIIAGASA---YPRD----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVA-D-PFK-YCD 306 (385)
Q Consensus 240 ~d~le~~i~~~~pk---lIi~~~s~---~~~~----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~-~-p~~-gaD 306 (385)
.++||+++.++.|. .+|+.+-. .+.. .=++++++||++||++||.|+. ..|+--.|... . -.. --|
T Consensus 200 a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV-~tGFGRTG~~FA~e~~gi~PD 278 (449)
T COG0161 200 ADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEV-ATGFGRTGKMFACEHAGIVPD 278 (449)
T ss_pred HHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecc-eeCCCcCchhhhhhhcCCCCC
Confidence 67788888776543 44554321 2222 2289999999999999999997 35543333211 1 011 247
Q ss_pred EEEECCCccCcc---ccEEEEEEeCCCCchhHHHHHHhh
Q 016668 307 VVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 307 iv~~S~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+++.+ |.|.| |-++ +++.+ ++.+.+..
T Consensus 279 i~~~a--KGLT~GY~Pl~a-~l~~~------~I~~~~~~ 308 (449)
T COG0161 279 ILCLA--KGLTGGYLPLSA-VLTSD------RIYEAFSD 308 (449)
T ss_pred eeeec--ccccccchhhHh-HhhhH------HHHHHHhc
Confidence 77765 98854 3344 44444 46665543
No 384
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=97.47 E-value=0.0036 Score=62.25 Aligned_cols=208 Identities=17% Similarity=0.113 Sum_probs=100.3
Q ss_pred hhhccccccCCCCCcHHHHHHHhhHhhccCCCCC-----CCCCCC-CCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeec
Q 016668 101 QFKSLELIASENFTSRAVMEAVGSCLTNKYSEGL-----PGKRYY-GGNEYIDELETLCQKRALAAFNLDENKWGVNVQP 174 (385)
Q Consensus 101 ~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~-----p~~r~~-~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~ 174 (385)
+.++|+|-=+---++++-++. +..|..-..+.+ ..-|.| +|.+-+-+ +++..++++|++.+ +|+.
T Consensus 21 ka~~L~LdmtRGKPs~eQLdL-S~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe----~r~l~a~llgv~~~----~viv 91 (425)
T PF12897_consen 21 KAKGLKLDMTRGKPSPEQLDL-SNPLLDLPGSSDYLADGTDCRNYPGGLDGIPE----ARELFAELLGVPPE----NVIV 91 (425)
T ss_dssp HHTT--EES---S--HHHHHG-GGGGGGSSTTCCBECTTEBTTSS-S-SS--HH----HHHHHHHHHTS-GG----GEEE
T ss_pred HHcCCCcccCCCCCCHHHHhh-hHHHhcCCCCccccCCCccccCCCCccCChHH----HHHHHHHHhCCCHH----HEEE
Confidence 336777765666666666664 333332221111 123778 66664444 45568899999985 4544
Q ss_pred CCcHH--HHHHHH-HHh----cc------CCC--EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCC
Q 016668 175 LSGSP--ANFEVY-TAI----LK------PHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (385)
Q Consensus 175 ~sGs~--A~~~a~-~al----l~------pGD--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD 239 (385)
.+.|. -++-++ .++ .. ..+ +.|++.|-|.-|++ .....|.+ .++++.++ .-+|
T Consensus 92 ~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFa--------i~E~~Gie--mi~VpM~~--dGPD 159 (425)
T PF12897_consen 92 GGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFA--------ITEHFGIE--MIPVPMTE--DGPD 159 (425)
T ss_dssp -SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHH--------HHHHCT-E--EEEEEEET--TEE-
T ss_pred eccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHH--------HHHhhCcE--EEecCCCC--CCCC
Confidence 43332 222121 222 11 122 56888876555543 34566764 44444552 3489
Q ss_pred HHHHHHHhhh-cCCcEEEEcCC-CCC--CCCCHHHHHHHH----HHcCcEEEEeccccccccccCc-cc---CCCC----
Q 016668 240 YDMLEKTAIL-FRPKLIIAGAS-AYP--RDFDYPRMRQIA----DAVGALLMMDMAHISGLVAASV-VA---DPFK---- 303 (385)
Q Consensus 240 ~d~le~~i~~-~~pklIi~~~s-~~~--~~~dl~~I~~ia----~~~ga~livD~ah~~Gli~~g~-~~---~p~~---- 303 (385)
+|.+|+++.+ ...|-||+-+. +|| ....=+.++++| ...+..++.|+|+......... .. +.++
T Consensus 160 mD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~ 239 (425)
T PF12897_consen 160 MDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAK 239 (425)
T ss_dssp HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHH
T ss_pred HHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHH
Confidence 9999999854 34588887532 234 233333444444 3469999999998876653221 11 2222
Q ss_pred --CCc--EEEECCCcc-CccccEEEEEEeCC
Q 016668 304 --YCD--VVTTTTHKS-LRGPRGGMIFFKKD 329 (385)
Q Consensus 304 --gaD--iv~~S~hK~-l~GprgG~I~~~~~ 329 (385)
..| +++.||+|. |+|-..+++.+.++
T Consensus 240 AGnpdrv~~F~STSKITf~GaGva~~aaS~~ 270 (425)
T PF12897_consen 240 AGNPDRVYVFASTSKITFPGAGVAFFAASEA 270 (425)
T ss_dssp TT-TTSEEEEEESTTTS-TTSS-EEEEE-HH
T ss_pred cCCCCeEEEEecccccccCCcceeeeecCHH
Confidence 345 678999995 67777788888775
No 385
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.46 E-value=0.0028 Score=70.01 Aligned_cols=150 Identities=20% Similarity=0.152 Sum_probs=88.1
Q ss_pred HHHHHHHHcCCCCCCCcceeecC-CcHHHHHHHHHHh-cc--CCCEEeecCCCCCccccCCccccccccccCcceEEEEe
Q 016668 153 CQKRALAAFNLDENKWGVNVQPL-SGSPANFEVYTAI-LK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~-sGs~A~~~a~~al-l~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~ 228 (385)
.+..++++.|.+-. |-... .+|.+-.+++++. .. +..+|++.+-.|..+.. +. ...+...|. +++.
T Consensus 129 ~Qtmi~~LtGm~va----NASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~---v~-~t~~~~~g~--~i~~ 198 (954)
T PRK12566 129 FQQMTIDLTGLDLA----NASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLS---VL-RTRAEGFGF--ELVV 198 (954)
T ss_pred HHHHHHHHhCchhh----hhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHH---HH-HHhhhcCCc--EEEE
Confidence 56788999999863 22222 3444444444444 22 25688887644322111 00 001122333 3322
Q ss_pred ccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc
Q 016668 229 YRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (385)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD 306 (385)
+++++.+.. +.-.|++.+|+ +|...|+++|.+++|+.|++++ +.+. +.+-+....|-+ |+|
T Consensus 199 ------------~~~~~~~~~-~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~-~~~d---~laL~ll~~Pge~GAD 261 (954)
T PRK12566 199 ------------DAVDNLAAH-AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALAC-VAAD---LLSLLVLTPPGELGAD 261 (954)
T ss_pred ------------cchhhcCCC-CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEE-EEeC---HHHHhCCCChhhcCCc
Confidence 233333322 35566676665 5777899999999999999866 4433 223234456667 999
Q ss_pred EEEECCC-----ccCccccEEEEEEeCC
Q 016668 307 VVTTTTH-----KSLRGPRGGMIFFKKD 329 (385)
Q Consensus 307 iv~~S~h-----K~l~GprgG~I~~~~~ 329 (385)
|++++.+ =.++||..|++.++++
T Consensus 262 I~vG~~Q~fGvp~~~GGP~ag~~a~~~~ 289 (954)
T PRK12566 262 VVLGSTQRFGVPMGYGGPHAAYFACRDD 289 (954)
T ss_pred EEeeCCCcCCCCCCCCCCCeeeeeehHH
Confidence 9987665 3358899999999885
No 386
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.39 E-value=0.0036 Score=60.20 Aligned_cols=254 Identities=19% Similarity=0.217 Sum_probs=135.1
Q ss_pred hhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 102 FKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 102 ~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
.++|+.++--.-..|.|.+|....+.-- ....|+. .|+|-+-++.....+-+++ +..++.|||+||
T Consensus 50 LDCInNVaHvghchp~VV~A~~kQmat~----~tN~RFl-----hd~lv~cA~~l~stlPeLs-----vc~F~NSGSEAN 115 (452)
T KOG1403|consen 50 LDCINNVAHVGHCHPEVVRAGAKQMATI----STNNRFL-----HDELVQCARTLTSTLPELS-----VCFFVNSGSEAN 115 (452)
T ss_pred HHHhhhhhhcccCCHHHHHHHHHHHhHh----cccchhh-----HHHHHHHHHHHhhcCCCce-----EEEEecCCchhh
Confidence 3788887777778899999877665421 2223332 3566653333333333433 567789999999
Q ss_pred HHHHHHh--ccCCCEEeecCCCCCccccCCc-ccccccccc-----CcceEEEEeccc------------cCCCCCCCHH
Q 016668 182 FEVYTAI--LKPHDRIMGLDLPHGGHLSHGF-MTPKRRVSG-----TSIYFESMPYRL------------DESTGLVDYD 241 (385)
Q Consensus 182 ~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~-~~~~~~~~~-----~g~~~~~i~~~~------------~~~~~~iD~d 241 (385)
-.++.-. ..+...+++++..|-||++.-. +.+. +... ..-++.+.|.+- +.+.+..--|
T Consensus 116 DLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPY-KF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad 194 (452)
T KOG1403|consen 116 DLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPY-KFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYAD 194 (452)
T ss_pred HHHHHHHHhhcccCceEEEechhccceeeeeeccce-eccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhh
Confidence 9988654 3344445566666667765210 0000 0000 001122222210 0001111224
Q ss_pred HHHHHhhhc--CCcEE---EE------cCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCc
Q 016668 242 MLEKTAILF--RPKLI---IA------GASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCD 306 (385)
Q Consensus 242 ~le~~i~~~--~pklI---i~------~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaD 306 (385)
.+++.+++. +-.-| +. +...-|-..-++.+++-.+.+|-+.|.|+.| .|+.--|.....++ -.|
T Consensus 195 ~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQ-vGFGRvG~hyWafq~y~fiPD 273 (452)
T KOG1403|consen 195 PVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQ-VGFGRVGSHYWAFQTYNFIPD 273 (452)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhh-hcccccchhhhhhhhhccccc
Confidence 455555321 11111 21 1111121222678888889999999999998 34322233334444 246
Q ss_pred EEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHh
Q 016668 307 VVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSA 380 (385)
Q Consensus 307 iv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~ 380 (385)
|++.. |.+ .|...+.+++.+ ++.+.+... -+..+.||....-.++++ -++.+..+..++.++||=
T Consensus 274 IVtmg--KpmGNGhPVa~Vattk------eIA~Af~atgv~YFNTyGGnPVsCAv~la-Vm~v~e~E~Lq~ha~~vG 341 (452)
T KOG1403|consen 274 IVTMG--KPMGNGHPVAAVATTK------EIAQAFHATGVEYFNTYGGNPVSCAVGLA-VMRVCEDENLQEHAQQVG 341 (452)
T ss_pred hheec--ccCCCCCeeeEEeccH------HHHHHhccccceehhccCCCchhHHHHHH-HHHHHhhhhHHHHHHHHH
Confidence 76654 776 567778888888 577766541 233345554444444444 455677777787777763
No 387
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.37 E-value=0.0034 Score=61.39 Aligned_cols=150 Identities=20% Similarity=0.253 Sum_probs=97.6
Q ss_pred ceeecCCcHHHH--HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHh
Q 016668 170 VNVQPLSGSPAN--FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA 247 (385)
Q Consensus 170 ~~V~~~sGs~A~--~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i 247 (385)
+.||+.|||.|+ .+-|.+..-|+..|.+++|+.|-|.- .-..+|..++...| .++.+..+|++-+-+.+
T Consensus 122 ~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~--------if~~ag~~~~~yrY-yd~~t~gld~~g~ledl 192 (427)
T KOG1411|consen 122 VTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKN--------IFKDAGLPVKFYRY-YDPKTRGLDFKGMLEDL 192 (427)
T ss_pred eEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCc--------cccccCcceeeeee-ccccccccchHHHHHHH
Confidence 568889988644 44455656789999999999877632 22456665555554 35567889998877666
Q ss_pred hhcCCc-EEEEc-CCCCCC-----CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCC------CC-CCc-EEEECC
Q 016668 248 ILFRPK-LIIAG-ASAYPR-----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP------FK-YCD-VVTTTT 312 (385)
Q Consensus 248 ~~~~pk-lIi~~-~s~~~~-----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p------~~-gaD-iv~~S~ 312 (385)
.+.-.. .|++. .-++|+ ...+++|.++.++.+.+-+.|+++ -|+-.++..... ++ |-+ +++.|+
T Consensus 193 ~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAY-QGfaSG~~d~DA~avR~F~~~g~~~~laQSy 271 (427)
T KOG1411|consen 193 GEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAY-QGFASGDLDKDAQAVRLFVEDGHEILLAQSY 271 (427)
T ss_pred hcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhh-cccccCCchhhHHHHHHHHHcCCceEeehhh
Confidence 553223 34432 234443 345899999999999999999985 555433221111 11 445 578899
Q ss_pred CccC--ccccEEE--EEEeCC
Q 016668 313 HKSL--RGPRGGM--IFFKKD 329 (385)
Q Consensus 313 hK~l--~GprgG~--I~~~~~ 329 (385)
-|++ .|-|.|. |+|++.
T Consensus 272 AKNMGLYgERvGa~svvc~~a 292 (427)
T KOG1411|consen 272 AKNMGLYGERVGALSVVCKDA 292 (427)
T ss_pred hhhcchhhhccceeEEEecCH
Confidence 9996 6777664 466665
No 388
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.29 E-value=0.0015 Score=57.44 Aligned_cols=54 Identities=13% Similarity=-0.009 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHcC--CCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCC
Q 016668 148 ELETLCQKRALAAFN--LDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHG 203 (385)
Q Consensus 148 ~le~~~~~~la~lfg--~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~g 203 (385)
++++++++++.+.+| ++. ++ -+|..++|+ .|+..++.+|++|||.|++++|.|.
T Consensus 96 ~lR~AiA~~l~~~~g~~v~~-~p-d~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 96 NFRKAIANFMAEARGGRVKF-DA-DMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHHHHHhCCCCcc-ch-hheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 788888899999988 332 11 246666665 5999999999999999999998654
No 389
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.19 E-value=0.0039 Score=60.21 Aligned_cols=144 Identities=17% Similarity=0.205 Sum_probs=89.9
Q ss_pred eeecCCcHHHHHHHHHHh--ccCCCEEeecCCCCCccccCCccccccccccCc-ceEEEEeccccCCCCCCCHHHHHHHh
Q 016668 171 NVQPLSGSPANFEVYTAI--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-IYFESMPYRLDESTGLVDYDMLEKTA 247 (385)
Q Consensus 171 ~V~~~sGs~A~~~a~~al--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-~~~~~i~~~~~~~~~~iD~d~le~~i 247 (385)
.||..|||.|+.....=| .=+...|.+.+|+.+.|-. ....+| ..+...+| +|.++..+|++.+-..+
T Consensus 102 ~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~--------if~~aGf~tv~~Y~y-Wd~~~k~~d~e~~Lsdl 172 (410)
T KOG1412|consen 102 GVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHA--------IFEKAGFTTVATYPY-WDAENKCVDLEGFLSDL 172 (410)
T ss_pred ceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHH--------HHHHcCCceeeeeee-ecCCCceecHHHHHHHH
Confidence 578899998887654322 2245568888888776632 112344 22344444 45566789999988887
Q ss_pred hhcCCcEE-EEc-CCCCCCCC-----CHHHHHHHHHHcCcEEEEeccccccccccCcccCC------CC-CCc-EEEECC
Q 016668 248 ILFRPKLI-IAG-ASAYPRDF-----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP------FK-YCD-VVTTTT 312 (385)
Q Consensus 248 ~~~~pklI-i~~-~s~~~~~~-----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p------~~-gaD-iv~~S~ 312 (385)
+.-..+-| ++. ..++|+-+ .+..|++..++.+.+.+.|.|+ =|+-.++.-.+. ++ +.. +++.||
T Consensus 173 ~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAY-QGfASGD~~~DawAiR~fV~~g~e~fv~QSF 251 (410)
T KOG1412|consen 173 ESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAY-QGFASGDLDADAWAIRYFVEQGFELFVCQSF 251 (410)
T ss_pred hhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhh-cccccCCccccHHHHHHHHhcCCeEEEEhhh
Confidence 65333433 332 23455433 3788999999999999999985 565433321111 12 433 688999
Q ss_pred CccC--ccccEEEE
Q 016668 313 HKSL--RGPRGGMI 324 (385)
Q Consensus 313 hK~l--~GprgG~I 324 (385)
.|.| .++|-|.+
T Consensus 252 aKNfGlYneRvGnl 265 (410)
T KOG1412|consen 252 AKNFGLYNERVGNL 265 (410)
T ss_pred hhhcccccccccce
Confidence 9996 77887643
No 390
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.09 E-value=0.015 Score=57.11 Aligned_cols=119 Identities=18% Similarity=0.284 Sum_probs=67.3
Q ss_pred HHHHHHHhhhcC----C-cEEEEcCC------CCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc----CCCC-
Q 016668 240 YDMLEKTAILFR----P-KLIIAGAS------AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA----DPFK- 303 (385)
Q Consensus 240 ~d~le~~i~~~~----p-klIi~~~s------~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~----~p~~- 303 (385)
++++|+++...+ | ..||+.+. +.....-+..+++|+++||+.+|+|+.|+ |...+|.+- ..++
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQT-GgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQT-GGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeec-CCCccCceeeehhcCCCC
Confidence 567777775433 3 34566432 22233348999999999999999999995 333444321 2233
Q ss_pred CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 304 YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 304 gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
-.|+||+| |-|. .|| .+.+.+ ++..-.+..|..-.|.|.-..+. ...++++.+++.
T Consensus 334 PpD~vTFS--KK~q--~gG-ffh~~~------frpn~pYrifNTWmGdP~k~lll--~~vv~~I~~~~L 389 (484)
T KOG1405|consen 334 PPDVVTFS--KKFQ--TGG-FFHDEE------FRPNEPYRIFNTWMGDPSKNLLL--EEVVQEIKREDL 389 (484)
T ss_pred Cccceehh--hhhh--cCc-cccCcc------cCCCchHHHhhhhcCChHHHHHH--HHHHHHHhHHHH
Confidence 46888776 5442 335 333443 33322333455556666554443 445555655544
No 391
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=96.06 E-value=0.036 Score=53.63 Aligned_cols=202 Identities=18% Similarity=0.190 Sum_probs=113.4
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHH-HHHhccCCC---EEeecCCCCCccccCCccccccccccCcceEEEEe
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEV-YTAILKPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMP 228 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a-~~all~pGD---~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~ 228 (385)
+-..++.+.|++.. +|...+.-++|... +.++-+|-. +|+. +.++.+|-.|. ....+.+.|..++-..
T Consensus 116 il~l~~~iVGA~e~----EvavmNsLTvNlh~Ll~sFyKPTekR~KILl---E~kaFPSDhYA-iesQ~~lhG~~~e~sm 187 (465)
T KOG3846|consen 116 ILPLLAPIVGAQEN----EVAVMNSLTVNLHSLLISFYKPTEKRFKILL---EKKAFPSDHYA-IESQCKLHGISPENSM 187 (465)
T ss_pred hhhhhhhhccCCch----hhhhHhhhhhHHHHHHHHhcCCcchhhhhhh---ccCCCCchHHH-HHhhhhhcCCChHHhe
Confidence 44567889999875 34444444555554 456777754 4553 33444442221 1113344454332222
Q ss_pred ccccCCCC--CCCHHHHHHHhhhcCC--cEEEEcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC
Q 016668 229 YRLDESTG--LVDYDMLEKTAILFRP--KLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 302 (385)
Q Consensus 229 ~~~~~~~~--~iD~d~le~~i~~~~p--klIi~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~ 302 (385)
..+.+..| .+..+++-+.++...- .+|+++... ++.-.|+.+|.+.-+..|+++=.|-||+.|-+ |--+
T Consensus 188 ~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNV-----pL~L 262 (465)
T KOG3846|consen 188 IQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNV-----PLQL 262 (465)
T ss_pred EEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCC-----ceEE
Confidence 22333333 5777777777765433 344444333 36678999999776777999999999987743 1111
Q ss_pred -C-CCcEEEECCCccC-ccccE-EEEEEeCCCC----------chhHHHHHHhh-cc---CCC----ccCCChHHHHHHH
Q 016668 303 -K-YCDVVTTTTHKSL-RGPRG-GMIFFKKDPV----------LGVELESAINN-AV---FPG----LQGGPHNHTIGGL 360 (385)
Q Consensus 303 -~-gaDiv~~S~hK~l-~Gprg-G~I~~~~~~~----------~~~~~~~~i~~-~~---fp~----~qg~p~~~~iaal 360 (385)
+ ++|+.+--..|.+ +|+-| |.++...+.- +..+..+++.. .+ -|| -+++|..+..+|+
T Consensus 263 HdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al 342 (465)
T KOG3846|consen 263 HDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVAL 342 (465)
T ss_pred eecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHH
Confidence 2 8899888889988 55544 4455544310 00112222111 11 122 2568999999998
Q ss_pred HHHHHHh
Q 016668 361 AVCLKHA 367 (385)
Q Consensus 361 a~Al~e~ 367 (385)
...|+..
T Consensus 343 ~~SLe~F 349 (465)
T KOG3846|consen 343 RSSLELF 349 (465)
T ss_pred HhhHHHH
Confidence 8887643
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=93.75 E-value=0.19 Score=53.10 Aligned_cols=151 Identities=13% Similarity=0.166 Sum_probs=84.2
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
+..++++.|++-+. + -+.--||.|-.+..++. .+++.++++..-.|.-.++ +. .-+..+..+++.
T Consensus 169 QTmi~dlTGL~~aN--A-SLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtls---V~---~TRa~~~~i~v~----- 234 (1001)
T KOG2040|consen 169 QTMITDLTGLPMAN--A-SLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLS---VV---KTRAKGFGIKVV----- 234 (1001)
T ss_pred HHhhhhccCCcccc--h-hhhccchhHHHHHHHHHhhcccceEEecCCCCcchhh---hh---hccccccceeEE-----
Confidence 45567888887642 1 12345787666665554 5666777765543322221 10 001111111111
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEE
Q 016668 233 ESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~ 310 (385)
..|..+...-.+ ..--|++.++. .+...|++++++.|++.|..+++- ..|.+--....|-+ |+||+++
T Consensus 235 ----~~~~~~~~~s~~--~v~gvlvQYP~t~G~i~d~~el~~~a~~~~s~vv~a----tDLLaLtiLrpPgefGaDIavG 304 (1001)
T KOG2040|consen 235 ----VSDIKEADYSSK--DVSGVLVQYPDTEGSVLDFDELVELAHANGSLVVMA----TDLLALTILRPPGEFGADIAVG 304 (1001)
T ss_pred ----ecCHHHhhcccc--ceeEEEEEcCCCCCcccCHHHHHHHhhccCceEEEe----ehhhHHHccCChhhcCceeeec
Confidence 233333322221 23456666665 478899999999999999887652 22222112334556 9999999
Q ss_pred CCCcc-----CccccEEEEEEeC
Q 016668 311 TTHKS-----LRGPRGGMIFFKK 328 (385)
Q Consensus 311 S~hK~-----l~GprgG~I~~~~ 328 (385)
|.+.. ++||..||+.+++
T Consensus 305 SsQRFGVPlGYGGPHAaFfAv~~ 327 (1001)
T KOG2040|consen 305 SSQRFGVPLGYGGPHAAFFAVSE 327 (1001)
T ss_pred cccccCccccCCCchHHHHHHHH
Confidence 99974 3677777766554
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=92.47 E-value=1.5 Score=42.33 Aligned_cols=200 Identities=17% Similarity=0.214 Sum_probs=103.1
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhccCCCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHH
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~-~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~ 182 (385)
-++.-+.+.-+|..|+..+.+++.|-..-|..- ...+.+.++...++ .+...+++++++++. +.+.....+||....
T Consensus 8 vvnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~-~tes~lreLlniPdn-~~vlf~QGGGt~qFa 85 (370)
T KOG2790|consen 8 VVNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIIN-DTESLLRELLNIPDN-YKVLFLQGGGTGQFA 85 (370)
T ss_pred eeecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHH-HHHHHHHHHHcCCCc-eeEEEEeCCCccccc
Confidence 356667788888999998888887654333211 01111223333333 356678999999873 434444456676555
Q ss_pred HHHHHhc--cCCC---EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC--CCCCHHHHHHHhhhcCCcEE
Q 016668 183 EVYTAIL--KPHD---RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLI 255 (385)
Q Consensus 183 ~a~~all--~pGD---~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~--~~iD~d~le~~i~~~~pklI 255 (385)
++...|. +.|+ -|++ |-.+- -..+.+...|. +..+..+..+.+ ..+|.+..+.. .+.+.+
T Consensus 86 Av~lNL~glK~g~~AdYiVT------GsWS~---KA~~EAkk~~~-~~~V~~~~k~y~ygkvPd~~~w~~~---~da~yv 152 (370)
T KOG2790|consen 86 AVPLNLIGLKHGRCADYVVT------GSWSA---KAAEEAKKYGT-PNIVIPKLKSYTYGKVPDPSTWELN---PDASYV 152 (370)
T ss_pred ccchhhhccccCCccceEEe------ccccH---HHHHHHHhhCC-ceEEeccccccccCcCCChhhcccC---CCccEE
Confidence 5555553 5553 3332 11110 00011112222 112222222223 25666554421 133566
Q ss_pred EEcCC--CCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCC
Q 016668 256 IAGAS--AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 256 i~~~s--~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
..+.. .-+..+|.-. +-.-.|++++.|++. .+. ..|++ .-++++...+|+. ||-| .+++.+++
T Consensus 153 yyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSS--nfl-----SrpvDvsk~gvi~aGAQKN~-G~aG~Tvvivr~d 220 (370)
T KOG2790|consen 153 YYCANETVHGVEFDFIP---VNDPKGAVLVADMSS--NFL-----SRPVDVSKFGVIFAGAQKNV-GPAGVTVVIVRKD 220 (370)
T ss_pred EEecCceeeceecCCCC---CCCCCCceEEEeccc--chh-----cCCccchhcceEEecccccc-CccccEEEEEehh
Confidence 55433 2232222111 123469999999973 322 24555 4568889999986 6777 56667775
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=92.44 E-value=0.3 Score=46.55 Aligned_cols=185 Identities=18% Similarity=0.194 Sum_probs=100.7
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cCCCEEee-cCCCCCccccCCccccccccccCcceEEEEec
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPHDRIMG-LDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~pGD~Vl~-~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~ 229 (385)
....+..+.|+..- -.+.|.|...-..+..++.++- +|.-+-++ +..+.-+-+ +.+.-+|.+..++.-
T Consensus 62 ~a~~~i~l~glhav-~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~--------ksi~~agfepiiie~ 132 (432)
T KOG3843|consen 62 FAKDAIHLAGLHAV-ANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCF--------KSIIHAGFEPIIIEN 132 (432)
T ss_pred HHHHHHHHhhhhhh-hceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHH--------HHHHhcCCCceeeec
Confidence 33445566676531 1134545432235566677773 45444333 322211100 112223432222221
Q ss_pred cccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC----CCC-CCCHHHHHHHHHHcCcEEEEeccccccccccCc---ccCC
Q 016668 230 RLDESTGLVDYDMLEKTAILFRPKLIIAGASA----YPR-DFDYPRMRQIADAVGALLMMDMAHISGLVAASV---VADP 301 (385)
Q Consensus 230 ~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~----~~~-~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~---~~~p 301 (385)
-++.+.-.-|++.+++.+++..+..|++-.+. -|+ +.++++|..||..|++.-++.++++ +-.... ....
T Consensus 133 i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayg--lqsee~i~~iaa~ 210 (432)
T KOG3843|consen 133 ILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYG--LQSEECIHKIAAA 210 (432)
T ss_pred cccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccc--cchHHHHHHHHHH
Confidence 13333335799999999987778865442222 244 3459999999999999999999863 321110 0111
Q ss_pred CC--CCcEEEECCCccCccccEEEEEE-eCCCCchhHHHHHHhhccCCCccC-CChH
Q 016668 302 FK--YCDVVTTTTHKSLRGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQG-GPHN 354 (385)
Q Consensus 302 ~~--gaDiv~~S~hK~l~GprgG~I~~-~~~~~~~~~~~~~i~~~~fp~~qg-~p~~ 354 (385)
-+ ..|.++.|+.|.|.-|-||.|+. =++ .+...|.+ +|||-.+ .|+-
T Consensus 211 ~~~grida~vqsldknf~vpvggaiia~fk~-----n~iq~iak-~ypgrasa~ps~ 261 (432)
T KOG3843|consen 211 AECGRIDAFVQSLDKNFMVPVGGAIIAAFKD-----NFIQEIAK-MYPGRASASPSL 261 (432)
T ss_pred hhhccHHHHHHHhhhcceeecchhHhhHhHH-----HHHHHHHH-hCCCccccCccH
Confidence 11 46888999999999998876543 232 56666654 4666433 4443
No 395
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=91.62 E-value=1.1 Score=44.28 Aligned_cols=175 Identities=15% Similarity=0.083 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHcCC-CCCCCcceeecCCcH-HHHHHHHHHhccC---CC---EEeecCCCCCccccCCccccccccc
Q 016668 147 DELETLCQKRALAAFNL-DENKWGVNVQPLSGS-PANFEVYTAILKP---HD---RIMGLDLPHGGHLSHGFMTPKRRVS 218 (385)
Q Consensus 147 ~~le~~~~~~la~lfg~-~~~~~~~~V~~~sGs-~A~~~a~~all~p---GD---~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (385)
.+||+.++ ++-++.|= ..++ --|.+.+|+ +-+.+++.+|..+ .+ .|+...|=|..+.. ++..
T Consensus 46 ~eL~~~Ir-~LH~~VGNAvt~g--r~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~---qt~~---- 115 (363)
T PF04864_consen 46 PELERQIR-RLHRVVGNAVTDG--RYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPE---QTDF---- 115 (363)
T ss_dssp HHHHHHHH-HHHHHH-SB--TT--SEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHH---HCCC----
T ss_pred HHHHHHHH-HHHHHhccccccC--cEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHH---HHHh----
Confidence 37777554 56666663 2221 134455555 5888888888422 22 56665553332211 1110
Q ss_pred cCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEE-EEcCCCCCCCCCHHHHHH-HHHHcCcEEEEeccccccccccC
Q 016668 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI-IAGASAYPRDFDYPRMRQ-IADAVGALLMMDMAHISGLVAAS 296 (385)
Q Consensus 219 ~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklI-i~~~s~~~~~~dl~~I~~-ia~~~ga~livD~ah~~Gli~~g 296 (385)
+.+..+++.- |...+. + .......| ++.+||||.- .|++ +.+.-+..+|+|-|++--..
T Consensus 116 f~s~~y~w~G---da~~~~-~--------~~~~~~~IElVTSPNNPDG----~lr~~V~~g~~~k~I~D~AYYWPhy--- 176 (363)
T PF04864_consen 116 FDSRLYKWAG---DASNFK-N--------SDNPSPYIELVTSPNNPDG----QLREAVLNGSSGKVIHDLAYYWPHY--- 176 (363)
T ss_dssp T-BTTEEEEE---ECCCGT-T---------S-CCGEEEEEESS-TTT----------SSTTTEEEEEEE-TT-STTT---
T ss_pred ccccCccccc---cHHhhc-c--------CCCCCCeEEEEeCCCCCcc----cccchhcCCCCcceeeeeeeecccc---
Confidence 1122233221 111111 1 01122344 6778888842 1222 23455677899999753211
Q ss_pred cccCCCC---CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHH
Q 016668 297 VVADPFK---YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIG 358 (385)
Q Consensus 297 ~~~~p~~---gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~ia 358 (385)
.|+. .-|++.||++|.= +|-|-||.+.+++ ++.+++...+-....|-....++=
T Consensus 177 ---TpI~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~-----~Va~kM~~y~~lnTiGvS~dsQLR 235 (363)
T PF04864_consen 177 ---TPITAPADHDIMLFTLSKLTGHAGSRFGWALVKDE-----EVAKKMTKYMELNTIGVSRDSQLR 235 (363)
T ss_dssp ---S---S-B--SEEEEEHHHHCS-GGG-EEEEEES-H-----HHHHHHHHHHHHHCSS--HHHHHH
T ss_pred ---cccCCCCCCceEEEEEecccCccccccceeeecCH-----HHHHHHHHHHHHhcccCcHHHHHH
Confidence 2332 3479999999952 5567799999997 777777655444444444444443
No 396
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [].; GO: 0047465 N-acylglucosamine-6-phosphate 2-epimerase activity, 0006051 N-acetylmannosamine metabolic process; PDB: 1Y0E_B 3IGS_A 1YXY_A 3Q58_B.
Probab=79.41 E-value=3.7 Score=37.34 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=48.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCcc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKS 315 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~ 315 (385)
.+.+++++++++. ...+|.++.+.-+++..++++.+-.|+.+.+++.|.+-.-.-. ...+ |+|++.++++-.
T Consensus 51 TPT~~ev~~l~~a-GadIIAlDaT~R~Rp~~l~~li~~i~~~~~l~MADist~ee~~------~A~~~G~D~I~TTLsGY 123 (192)
T PF04131_consen 51 TPTLKEVDALAEA-GADIIALDATDRPRPETLEELIREIKEKYQLVMADISTLEEAI------NAAELGFDIIGTTLSGY 123 (192)
T ss_dssp S-SHHHHHHHHHC-T-SEEEEE-SSSS-SS-HHHHHHHHHHCTSEEEEE-SSHHHHH------HHHHTT-SEEE-TTTTS
T ss_pred CCCHHHHHHHHHc-CCCEEEEecCCCCCCcCHHHHHHHHHHhCcEEeeecCCHHHHH------HHHHcCCCEEEcccccC
Confidence 3678999998865 7899999988877778899999888988899999987432111 1112 899998887653
No 397
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]
Probab=77.65 E-value=4.8 Score=37.09 Aligned_cols=110 Identities=18% Similarity=0.156 Sum_probs=68.3
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCC-CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCcc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPRDF-DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKS 315 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~~~-dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~ 315 (385)
+.+++++++++. ...+|.++.+.-+++. +++++.+-.|..|.+++.|.+..-. +. +... |+||+-+|++-.
T Consensus 86 ptlkeVd~L~~~-Ga~IIA~DaT~R~RP~~~~~~~i~~~k~~~~l~MAD~St~ee----~l--~a~~~G~D~IGTTLsGY 158 (229)
T COG3010 86 PTLKEVDALAEA-GADIIAFDATDRPRPDGDLEELIARIKYPGQLAMADCSTFEE----GL--NAHKLGFDIIGTTLSGY 158 (229)
T ss_pred ccHHHHHHHHHC-CCcEEEeecccCCCCcchHHHHHHHhhcCCcEEEeccCCHHH----HH--HHHHcCCcEEecccccc
Confidence 457888888865 6788989888777665 8999999988899999999874211 11 1222 889998886653
Q ss_pred Ccc-ccEEEEEEeCCCCchhHHHHHHhhc-cCCCccCCChHHHHHHHHH
Q 016668 316 LRG-PRGGMIFFKKDPVLGVELESAINNA-VFPGLQGGPHNHTIGGLAV 362 (385)
Q Consensus 316 l~G-prgG~I~~~~~~~~~~~~~~~i~~~-~fp~~qg~p~~~~iaala~ 362 (385)
.+ +. .-..++ +++.+.+... .|-.-.|..|....|+.+.
T Consensus 159 -T~~~~---~~~~pD----f~lvk~l~~~~~~vIAEGr~~tP~~Ak~a~ 199 (229)
T COG3010 159 -TGYTE---KPTEPD----FQLVKQLSDAGCRVIAEGRYNTPEQAKKAI 199 (229)
T ss_pred -cCCCC---CCCCCc----HHHHHHHHhCCCeEEeeCCCCCHHHHHHHH
Confidence 22 11 111122 2444544433 3333346666666665443
No 398
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=70.22 E-value=8.7 Score=31.78 Aligned_cols=49 Identities=14% Similarity=0.065 Sum_probs=40.4
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEe
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMD 285 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD 285 (385)
..++++++++.+.+ +|..|++|.-.+|+..-.++..+++++.++-++.-
T Consensus 47 Hkl~~eEle~~lee-~~E~ivvGTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEE-GPEVIVVGTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhc-CCcEEEEecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 47999999999975 89999998777787666688899999999766653
No 399
>TIGR03586 PseI pseudaminic acid synthase.
Probab=64.00 E-value=11 Score=37.45 Aligned_cols=89 Identities=18% Similarity=0.286 Sum_probs=59.1
Q ss_pred CCCCCHHHHHHHhhhc----CCcEEEE-cCCCCCC---CCCHHHHHHHHHHcCcEE-EEeccccccccccCcccCCCC-C
Q 016668 235 TGLVDYDMLEKTAILF----RPKLIIA-GASAYPR---DFDYPRMRQIADAVGALL-MMDMAHISGLVAASVVADPFK-Y 304 (385)
Q Consensus 235 ~~~iD~d~le~~i~~~----~pklIi~-~~s~~~~---~~dl~~I~~ia~~~ga~l-ivD~ah~~Gli~~g~~~~p~~-g 304 (385)
+|.-++++++.+++.. .++++++ +.+.||. ..|+..|..+.++++..+ ++| |..|.... .-.+. |
T Consensus 141 tG~~t~~Ei~~Av~~i~~~g~~~i~LlhC~s~YP~~~~~~nL~~i~~lk~~f~~pVG~SD--Ht~G~~~~---~aAva~G 215 (327)
T TIGR03586 141 TGIATLEEIQEAVEACREAGCKDLVLLKCTSSYPAPLEDANLRTIPDLAERFNVPVGLSD--HTLGILAP---VAAVALG 215 (327)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEecCCCCCCCcccCCHHHHHHHHHHhCCCEEeeC--CCCchHHH---HHHHHcC
Confidence 5666888887776432 3466654 4556763 568999999999999888 788 87774321 01122 8
Q ss_pred CcEE--EECCCccCccccEEEEEEeC
Q 016668 305 CDVV--TTTTHKSLRGPRGGMIFFKK 328 (385)
Q Consensus 305 aDiv--~~S~hK~l~GprgG~I~~~~ 328 (385)
|+++ -++..|++.||..-.-+..+
T Consensus 216 A~iIEkH~tld~~l~G~D~~~Sl~p~ 241 (327)
T TIGR03586 216 ACVIEKHFTLDRSDGGVDSAFSLEPD 241 (327)
T ss_pred CCEEEeCCChhhcCCCCChhccCCHH
Confidence 8864 57888999888764444444
No 400
>PLN02672 methionine S-methyltransferase
Probab=62.30 E-value=1.2e+02 Score=35.11 Aligned_cols=182 Identities=14% Similarity=0.139 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHhhhccccccCCCCCcHHHH---HHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q 016668 89 EVCEIITKEKERQFKSLELIASENFTSRAVM---EAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE 165 (385)
Q Consensus 89 ~~~~~i~~e~~~~~~~l~Liasen~~s~~V~---~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~ 165 (385)
.+++.++.-.......++|.-.+....++-+ ..+.+.+.+.. -.|... -.|+. .+++++..-+..+++.+-
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~ 447 (1082)
T PLN02672 374 TIFKFLKNGFHEVSGSLDLSFEDESVADEKIPFLAYLASALKGLS--YFPCEP-PAGSK---RFRNLIAGFMRIYHHIPL 447 (1082)
T ss_pred HHHHHHHccchhhhhhccccccccccchhhccHHHHHHHHHccCC--CCCCCC-Cccch---HHHHHHHHHHHHhcCCcC
Confidence 3555555443444466777644444433322 23344443221 123322 23555 677777778888888874
Q ss_pred CCCcceeecCCcHHHHHHHHH------HhccCCCEEeecCCCCCccccCCccccc-----cccccCcceEEEEeccccCC
Q 016668 166 NKWGVNVQPLSGSPANFEVYT------AILKPHDRIMGLDLPHGGHLSHGFMTPK-----RRVSGTSIYFESMPYRLDES 234 (385)
Q Consensus 166 ~~~~~~V~~~sGs~A~~~a~~------all~pGD~Vl~~~~~~ggh~s~~~~~~~-----~~~~~~g~~~~~i~~~~~~~ 234 (385)
..-.+ |.+.|-..|+..++. +++..+..-..+. -|.+.. ....-.+..+.++.-+
T Consensus 448 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 513 (1082)
T PLN02672 448 TPDNV-VVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK---------KWLTSLAIENATSDSKSDDVITVIEAP---- 513 (1082)
T ss_pred Cccce-EEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH---------HHHhHhhhhcccccCccCCeEEEEeCC----
Confidence 32223 344566667766553 3344432222111 011000 0011112222222211
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCCC--CCCHHHHHHHHHHcCcEEEEecccccccc
Q 016668 235 TGLVDYDMLEKTAILFRPKLIIAGASAYPR--DFDYPRMRQIADAVGALLMMDMAHISGLV 293 (385)
Q Consensus 235 ~~~iD~d~le~~i~~~~pklIi~~~s~~~~--~~dl~~I~~ia~~~ga~livD~ah~~Gli 293 (385)
..- +.+.+++++.+|++|+++.-.+-. ..-++.|.+.+++.|++|+.|++....+.
T Consensus 514 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 571 (1082)
T PLN02672 514 -RQS--DLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLELS 571 (1082)
T ss_pred -Ccc--hHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhheeec
Confidence 122 356777878899999987554332 23478899999999999999997655443
No 401
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=52.42 E-value=40 Score=27.52 Aligned_cols=43 Identities=9% Similarity=-0.143 Sum_probs=31.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
....+++.+.+.+.+|++|.++.+......++.++.+..++.+
T Consensus 36 ~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~ 78 (119)
T cd02067 36 DVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG 78 (119)
T ss_pred CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC
Confidence 3567788777777799999887665555556778888777764
No 402
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=49.52 E-value=43 Score=33.63 Aligned_cols=93 Identities=14% Similarity=0.210 Sum_probs=58.6
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEE--cCCCCCC----CCCHHHHHHHHHHcCcEEEEecccccc---ccccCcccC
Q 016668 235 TGL-VDYDMLEKTAIL----FRPKLIIA--GASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG---LVAASVVAD 300 (385)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~--~~s~~~~----~~dl~~I~~ia~~~ga~livD~ah~~G---li~~g~~~~ 300 (385)
+|. .++++++.+++. ..++++++ |.+.||. ..|+..|..+.+..+..+++|..|+.| ++.. ....
T Consensus 232 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~r~~~~~-~a~a 310 (360)
T PRK12595 232 RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGRRDLLLP-TAKA 310 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcchhhHHH-HHHH
Confidence 565 688888777643 23578877 4455552 368999999988899999999999877 3210 0001
Q ss_pred CCC-CCc--EEEECCCccCccccEEEEEEeC
Q 016668 301 PFK-YCD--VVTTTTHKSLRGPRGGMIFFKK 328 (385)
Q Consensus 301 p~~-gaD--iv~~S~hK~l~GprgG~I~~~~ 328 (385)
.+. ||| ++=.-+.|...|+.+..-+..+
T Consensus 311 Ava~GAdg~~iE~H~dp~~a~~D~~~sl~p~ 341 (360)
T PRK12595 311 ALAIGADGVMAEVHPDPAVALSDSAQQMDIP 341 (360)
T ss_pred HHHcCCCeEEEEecCCCCCCCCchhhhCCHH
Confidence 122 787 3333346777777664444433
No 403
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=48.62 E-value=42 Score=32.08 Aligned_cols=57 Identities=12% Similarity=0.240 Sum_probs=42.0
Q ss_pred CCCC-CHHHHHHHhhhc----CCcEEEEc--CCCC-C---CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 235 TGLV-DYDMLEKTAILF----RPKLIIAG--ASAY-P---RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 235 ~~~i-D~d~le~~i~~~----~pklIi~~--~s~~-~---~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
+|.- ++++++.+++.. ..+++++. .+.| | ...|+..|..+.+..+..+++|..|+.|
T Consensus 139 ~G~~~t~~e~~~Ave~i~~~Gn~~i~l~~rG~s~y~~~~~~~~dl~~i~~lk~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 139 RGMGNTIEEWLYAAEYILSSGNGNVILCERGIRTFEKATRNTLDLSAVPVLKKETHLPIIVDPSHAAG 206 (260)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCcEEEEECCCCCCCCCCcCCcCHHHHHHHHHhhCCCEEEcCCCCCC
Confidence 5644 888887776432 24677663 4455 4 3578999999998889999999999876
No 404
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=45.90 E-value=49 Score=30.69 Aligned_cols=88 Identities=23% Similarity=0.261 Sum_probs=54.3
Q ss_pred HHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
++.+++++.. ..|-..+||.++ ++++.|+.+.+.|-.-||| |- .+-++| +.
T Consensus 133 aa~vL~l~dg---~VVDiGGGTTGI-----si~kkGkViy~ADEpTGGt--Hm------tLvlAG-------------~y 183 (277)
T COG4820 133 AADVLQLDDG---GVVDIGGGTTGI-----SIVKKGKVIYSADEPTGGT--HM------TLVLAG-------------NY 183 (277)
T ss_pred HHHHhccCCC---cEEEeCCCccee-----EEEEcCcEEEeccCCCCce--eE------EEEEec-------------cc
Confidence 5677888874 456667888775 4689999999888766775 31 112222 34
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCC-HHHHHHHHHHc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFD-YPRMRQIADAV 278 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~d-l~~I~~ia~~~ 278 (385)
.|++++.|+.-+.++ | +.-.++..-| ++++++|.++|
T Consensus 184 gi~~EeAE~~Kr~~k-~----~~Eif~~v~PV~eKMAeIv~~h 221 (277)
T COG4820 184 GISLEEAEQYKRGHK-K----GEEIFPVVKPVYEKMAEIVARH 221 (277)
T ss_pred CcCHhHHHHhhhccc-c----chhcccchhHHHHHHHHHHHHH
Confidence 578887776543221 1 1112333223 78999998876
No 405
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.54 E-value=49 Score=33.18 Aligned_cols=59 Identities=19% Similarity=0.271 Sum_probs=42.5
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEEcC-----C-CCC-CCCCHHHHHHHHHHcCcEEEEecccccccc
Q 016668 235 TGL-VDYDMLEKTAIL----FRPKLIIAGA-----S-AYP-RDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (385)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~~~-----s-~~~-~~~dl~~I~~ia~~~ga~livD~ah~~Gli 293 (385)
+|. .+++++...++. ...+++++.. . .|+ ...|+..|..+.+..+..+|+|.+|+.|..
T Consensus 215 ~G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 215 RGMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 454 488887666543 2457777743 2 355 467999999997777999999999988753
No 406
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=44.98 E-value=55 Score=31.19 Aligned_cols=58 Identities=16% Similarity=0.273 Sum_probs=42.6
Q ss_pred CC-CCCHHHHHHHhhh----cCCcEEEEc--CCCCC---C-CCCHHHHHHHHHHcCcEEEEeccccccc
Q 016668 235 TG-LVDYDMLEKTAIL----FRPKLIIAG--ASAYP---R-DFDYPRMRQIADAVGALLMMDMAHISGL 292 (385)
Q Consensus 235 ~~-~iD~d~le~~i~~----~~pklIi~~--~s~~~---~-~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (385)
+| ..++++++..++. ..++++++. .+.|+ + ..|+..|..+.++.+..+++|-+|+.|.
T Consensus 129 ~G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 129 RGLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 56 6788888766643 235787773 34454 2 5788888888888999999999998774
No 407
>PRK00945 acetyl-CoA decarbonylase/synthase complex subunit epsilon; Provisional
Probab=44.56 E-value=1.2e+02 Score=27.23 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=41.8
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~ 300 (385)
.+.++.+.+++..-+--+|++|.-......-.+++.+++++.++.++.=.-.+-+++..|..+.
T Consensus 21 ~~~p~~aa~lI~~AKrPlIivG~ga~~~~ea~e~l~elaEkl~iPVvtT~~~~~~~~~kgv~~~ 84 (171)
T PRK00945 21 IVSPKIAAMMIKKAKRPLLVVGSLLLDDEELLDRAVKIAKKANIPVAATGGSYKGLIDKGVDAK 84 (171)
T ss_pred ccCHHHHHHHHHhCCCcEEEECcCccccchHHHHHHHHHHHHCCCEEEccccccccccCCccCC
Confidence 4678888888865333377776533221234788999999999999876544456665555443
No 408
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=44.33 E-value=76 Score=26.47 Aligned_cols=50 Identities=12% Similarity=0.013 Sum_probs=37.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
.++.++++.++.. .|.+|++|.-..+....-+++.+..++.|+-+.+-.+
T Consensus 45 ~l~~~~l~~ll~~-~peivliGTG~~~~~~~~~~~~~~l~~~Gi~ve~m~T 94 (117)
T cd05126 45 GLQPEELEELLEE-GVEVIVIGTGQSGALKVPPETVEKLEKRGVEVLVLPT 94 (117)
T ss_pred cCCHHHHHHHHhc-CCCEEEEcCCCCccccCCHHHHHHHHhcCCEEEEcCh
Confidence 5889999999965 7999999866555433346777788889988877443
No 409
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase. This family is a subset of the Pfam model pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.
Probab=43.94 E-value=32 Score=34.15 Aligned_cols=90 Identities=20% Similarity=0.314 Sum_probs=59.4
Q ss_pred CCCCCHHHHHHHhhhc----CC--cEEEE-cCCCCCC---CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-
Q 016668 235 TGLVDYDMLEKTAILF----RP--KLIIA-GASAYPR---DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK- 303 (385)
Q Consensus 235 ~~~iD~d~le~~i~~~----~p--klIi~-~~s~~~~---~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~- 303 (385)
+|.-++++++..++.. .+ +++++ +.+.||. ..++..|..+.++++..+.. ..|..|.... .-.+.
T Consensus 140 tGmatl~Ei~~Av~~i~~~G~~~~~i~llhC~s~YP~~~~~~nL~~I~~Lk~~f~~pVG~-SdHt~G~~~~---~aAval 215 (329)
T TIGR03569 140 TGMATLEEIEAAVGVLRDAGTPDSNITLLHCTTEYPAPFEDVNLNAMDTLKEAFDLPVGY-SDHTLGIEAP---IAAVAL 215 (329)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCcCcEEEEEECCCCCCCcccCCHHHHHHHHHHhCCCEEE-CCCCccHHHH---HHHHHc
Confidence 5666888888776432 23 36554 4566773 56899999999999977775 4688775321 01122
Q ss_pred CCcEE--EECCCccCccccEEEEEEeC
Q 016668 304 YCDVV--TTTTHKSLRGPRGGMIFFKK 328 (385)
Q Consensus 304 gaDiv--~~S~hK~l~GprgG~I~~~~ 328 (385)
||+++ -++..|++.||....=+..+
T Consensus 216 GA~iIEkH~tldk~~~G~D~~~Sl~p~ 242 (329)
T TIGR03569 216 GATVIEKHFTLDKNLPGPDHKASLEPD 242 (329)
T ss_pred CCCEEEeCCChhhcCCCCChhhcCCHH
Confidence 88964 68999999998765444444
No 410
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=43.48 E-value=66 Score=29.52 Aligned_cols=48 Identities=8% Similarity=0.057 Sum_probs=31.4
Q ss_pred CCCHHHHHHHhh----hcCCcEEEEcCCCC---CC--CCC-------HHHHHHHHHHcCcEEEE
Q 016668 237 LVDYDMLEKTAI----LFRPKLIIAGASAY---PR--DFD-------YPRMRQIADAVGALLMM 284 (385)
Q Consensus 237 ~iD~d~le~~i~----~~~pklIi~~~s~~---~~--~~d-------l~~I~~ia~~~ga~liv 284 (385)
.+++++|++.++ ..++++|++++-.. +. ... ++.|.++|+++|+.+++
T Consensus 105 ~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 105 SLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 467777766553 34789999875321 11 111 46788899999988776
No 411
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=41.68 E-value=78 Score=27.07 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=36.2
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
++++.++. .+-++++.+.+.+.+|++|.++.........++++.+..++.+
T Consensus 32 ~eVi~LG~-----~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~ 82 (137)
T PRK02261 32 FEVINLGV-----MTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG 82 (137)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC
Confidence 56666543 3567888888877889999887665555556777777777663
No 412
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=40.56 E-value=63 Score=27.48 Aligned_cols=53 Identities=15% Similarity=0.134 Sum_probs=37.5
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCc
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga 280 (385)
.|+++.++++ ..++++-+.+.++++.+|.++.-.......++++.+..++.|.
T Consensus 27 GfeVidLG~~-----v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl 79 (128)
T cd02072 27 GFNVVNLGVL-----SPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGL 79 (128)
T ss_pred CCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCC
Confidence 3577765543 5678887777777899988765444455567888888888764
No 413
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=40.55 E-value=40 Score=27.29 Aligned_cols=52 Identities=15% Similarity=0.122 Sum_probs=35.8
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHc--CcEEEEecccc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHI 289 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~--ga~livD~ah~ 289 (385)
.+.+++.+.+.+.+|++|.++.+..+......++.+..|+. ++.+++=+.|.
T Consensus 38 ~~~~~l~~~~~~~~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~GG~~~ 91 (121)
T PF02310_consen 38 VPPEELVEALRAERPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVGGPHA 91 (121)
T ss_dssp B-HHHHHHHHHHTTCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEEESSS
T ss_pred CCHHHHHHHHhcCCCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEECCch
Confidence 45688988888889999988654344333456666666666 77888877663
No 414
>smart00642 Aamy Alpha-amylase domain.
Probab=37.89 E-value=25 Score=31.05 Aligned_cols=27 Identities=19% Similarity=0.331 Sum_probs=23.2
Q ss_pred CCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 261 ~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
.++...+++++++-||++|+.++.|..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 345567899999999999999999975
No 415
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=36.54 E-value=75 Score=27.24 Aligned_cols=53 Identities=19% Similarity=0.176 Sum_probs=37.3
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCc
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGA 280 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga 280 (385)
.|+++.++++ ..++++-+.+.++++.+|.++.-.......++++.+..++.|.
T Consensus 29 GfeVi~LG~~-----v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 29 GFNVVNLGVL-----SPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred CCEEEECCCC-----CCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCC
Confidence 3577765543 5678887777777899988754444444468888888888874
No 416
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=35.93 E-value=1.3e+02 Score=24.05 Aligned_cols=69 Identities=12% Similarity=0.202 Sum_probs=39.0
Q ss_pred cEEEEcCCCCCCCCCH-HHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCC--ccCc-cccEEEEEEeC
Q 016668 253 KLIIAGASAYPRDFDY-PRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTH--KSLR-GPRGGMIFFKK 328 (385)
Q Consensus 253 klIi~~~s~~~~~~dl-~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~h--K~l~-GprgG~I~~~~ 328 (385)
|+++++....+...=+ .++-++++++|+-.-+|..+ .+. ...-.+++|++++|.| ..|. .|. |.++.-.
T Consensus 3 KIL~aCG~GvgSS~~ik~kve~~l~~~gi~~~~~~~~-v~~-----~~~~~~~aDiiv~s~~l~~~~~~~~~-~~v~~~~ 75 (93)
T COG3414 3 KILAACGNGVGSSTMIKMKVEEVLKELGIDVDVEQCA-VDE-----IKALTDGADIIVTSTKLADEFEDIPK-GYVVITG 75 (93)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHHcCCCceeeeEE-ecc-----cccCCCcccEEEEehHhhhhcCcCCC-ceEEEEc
Confidence 5565555443322222 46788999999974455443 222 2223348899988877 5563 344 5555433
No 417
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=34.11 E-value=97 Score=25.60 Aligned_cols=41 Identities=10% Similarity=0.015 Sum_probs=29.2
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV 278 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ 278 (385)
..++++-+.+.+.+|++|+++.+.......++++.+..++.
T Consensus 37 vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~ 77 (122)
T cd02071 37 QTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL 77 (122)
T ss_pred CCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc
Confidence 56677777777778999998766544444567777777766
No 418
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=34.02 E-value=73 Score=28.92 Aligned_cols=52 Identities=12% Similarity=0.102 Sum_probs=39.3
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
.+++++++. .+..+++.+.+.+.+|++|.++.+.......++++.+..++.|
T Consensus 112 G~~vi~LG~-----~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~ 163 (197)
T TIGR02370 112 GFDVIDLGR-----DVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG 163 (197)
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC
Confidence 357776554 3677899888888899999988776666566788888888874
No 419
>PF14639 YqgF: Holliday-junction resolvase-like of SPT6 ; PDB: 3PSI_A 3PSF_A.
Probab=32.63 E-value=27 Score=30.53 Aligned_cols=43 Identities=21% Similarity=0.303 Sum_probs=25.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
.-|.+.|.+.+.+++|.+|.++..+.....-.+.|.++.++..
T Consensus 49 ~~~~~~l~~~i~~~kP~vI~v~g~~~~s~~l~~~v~~~v~~~~ 91 (150)
T PF14639_consen 49 EEDMERLKKFIEKHKPDVIAVGGNSRESRKLYDDVRDIVEELD 91 (150)
T ss_dssp HHHHHHHHHHHHHH--SEEEE--SSTHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCChhHHHHHHHHHHHHHHhh
Confidence 3567788889988999999996533222223456666666654
No 420
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=31.73 E-value=1.1e+02 Score=27.73 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=36.7
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
++++.++. .+..+++.+.+.+.+|++|.++.+......+++++.+..++.+
T Consensus 111 ~~vi~lG~-----~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~ 161 (201)
T cd02070 111 FEVIDLGR-----DVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG 161 (201)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC
Confidence 46665443 3678899888888899999887665555556777777777764
No 421
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=31.57 E-value=33 Score=35.65 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=25.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|+++|++-||++|+.||.|..
T Consensus 75 ~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 75 TKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred cCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 5677888999999999999999999986
No 422
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=31.41 E-value=1.3e+02 Score=29.65 Aligned_cols=52 Identities=17% Similarity=0.223 Sum_probs=34.9
Q ss_pred CCCHHHHHHHhhhc-----CCcEEEEcCCCCC-C-CCCHHHHHHHHHHcCcEEEEeccc
Q 016668 237 LVDYDMLEKTAILF-----RPKLIIAGASAYP-R-DFDYPRMRQIADAVGALLMMDMAH 288 (385)
Q Consensus 237 ~iD~d~le~~i~~~-----~pklIi~~~s~~~-~-~~dl~~I~~ia~~~ga~livD~ah 288 (385)
.++.++++..++.. .-.+|+++.|.=+ . ...|.+|.++|++.|+.+++|.+.
T Consensus 110 ~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 110 EISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 67777766655321 2245666554322 1 234899999999999999999874
No 423
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=31.06 E-value=24 Score=33.19 Aligned_cols=27 Identities=15% Similarity=0.297 Sum_probs=23.2
Q ss_pred CCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 261 ~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
.+|...+++++++.||++|+.||.|..
T Consensus 47 ~~Gt~~d~~~Lv~~~h~~gi~VilD~V 73 (316)
T PF00128_consen 47 RFGTMEDFKELVDAAHKRGIKVILDVV 73 (316)
T ss_dssp TTBHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ccchhhhhhhhhhccccccceEEEeee
Confidence 455556899999999999999999976
No 424
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=30.05 E-value=1.2e+02 Score=29.32 Aligned_cols=58 Identities=21% Similarity=0.226 Sum_probs=38.3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCC--CCC-CCC-----------HHHHHHHHHHcCcEEEEeccccccccccCc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASA--YPR-DFD-----------YPRMRQIADAVGALLMMDMAHISGLVAASV 297 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~--~~~-~~d-----------l~~I~~ia~~~ga~livD~ah~~Gli~~g~ 297 (385)
..|.+.+++.+++.+|.+||-..-. .-. ..+ ...|+++|+++|+++|+=.+ ..++.|.
T Consensus 36 itd~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiST---DyVFDG~ 107 (281)
T COG1091 36 ITDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHIST---DYVFDGE 107 (281)
T ss_pred ccChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeec---ceEecCC
Confidence 4688999999988899998753221 110 111 35788999999999986432 3444443
No 425
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=29.98 E-value=5.2e+02 Score=25.33 Aligned_cols=96 Identities=13% Similarity=0.096 Sum_probs=54.8
Q ss_pred eeecCCcHHHHHHHHHHhccCCC--EEeecC--CCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHH
Q 016668 171 NVQPLSGSPANFEVYTAILKPHD--RIMGLD--LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKT 246 (385)
Q Consensus 171 ~V~~~sGs~A~~~a~~all~pGD--~Vl~~~--~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~ 246 (385)
.|.+.+-|.+...++....+.|. +|++.+ |.+.||.. .+.+...|..+..++ | ..+...
T Consensus 122 ~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~------ak~L~~~gI~~~~I~---D--------sa~~~~ 184 (301)
T COG1184 122 VILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIM------AKELRQSGIPVTVIV---D--------SAVGAF 184 (301)
T ss_pred EEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHH------HHHHHHcCCceEEEe---c--------hHHHHH
Confidence 46777777788878877777776 666665 33334322 124455665444332 2 233333
Q ss_pred hhhcCCcEEEEcCCC---CCCCC---CHHHHHHHHHHcCcEEEEe
Q 016668 247 AILFRPKLIIAGASA---YPRDF---DYPRMRQIADAVGALLMMD 285 (385)
Q Consensus 247 i~~~~pklIi~~~s~---~~~~~---dl~~I~~ia~~~ga~livD 285 (385)
++ +...|++|... +|... ----|+..||+.+..+++=
T Consensus 185 ~~--~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 185 MS--RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred HH--hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 32 46667776532 33221 2356788899998887763
No 426
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.02 E-value=1.7e+02 Score=30.08 Aligned_cols=35 Identities=14% Similarity=0.119 Sum_probs=26.0
Q ss_pred CcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEec
Q 016668 252 PKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (385)
Q Consensus 252 pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ 286 (385)
-+.++++-=.-|...+.+.|.++|++.|..+++|-
T Consensus 144 ~~~vVLSDY~KG~L~~~q~~I~~ar~~~~pVLvDP 178 (467)
T COG2870 144 FDALVLSDYAKGVLTNVQKMIDLAREAGIPVLVDP 178 (467)
T ss_pred CCEEEEeccccccchhHHHHHHHHHHcCCcEEECC
Confidence 46677632122455568999999999999999994
No 427
>PLN02673 quinolinate synthetase A
Probab=27.84 E-value=6.6e+02 Score=27.63 Aligned_cols=99 Identities=11% Similarity=0.005 Sum_probs=50.7
Q ss_pred cCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC
Q 016668 85 EADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD 164 (385)
Q Consensus 85 ~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~ 164 (385)
.-|++..+.|.+.+++.+ -+|-..+|..|+|.+.. .....+|.+++.| |-|+- + +.+++.-..+
T Consensus 253 ~p~~~~v~eI~~lkkek~---avILAH~Yq~pEVQ~iA-Da~~~~~p~~~vG----------DSL~L-A-~~A~~~~~~~ 316 (724)
T PLN02673 253 FPEESKVEELVNVLKEKK---IGVVAHFYMDPEVQGVL-TAAQKHWPHISIS----------DSLIM-A-DSAVKMAKAG 316 (724)
T ss_pred CCCHHHHHHHHHHHHhcC---cEEEEecCCCHHHHHHh-hhhhcccCCCeec----------cHHHH-H-HHHHHhccCC
Confidence 345566666655544322 23568999999996654 3444556555544 23432 2 2232222333
Q ss_pred CCCCcceeecCCcHHHHHHHHHHhccCC----CEE-eecCCCCCc
Q 016668 165 ENKWGVNVQPLSGSPANFEVYTAILKPH----DRI-MGLDLPHGG 204 (385)
Q Consensus 165 ~~~~~~~V~~~sGs~A~~~a~~all~pG----D~V-l~~~~~~gg 204 (385)
.+ +....|-.-+.-....+|+|. .+| +.+++..|+
T Consensus 317 a~-----~IVFcGV~FMAEtA~kIL~p~~~~~k~V~llPd~~AGC 356 (724)
T PLN02673 317 CQ-----FITVLGVDFMSENVRAILDQAGFGEVGVYRMSNERIGC 356 (724)
T ss_pred CC-----EEEEeceeeHHhhHHHhcCCCccCCceEEeCCCCCCCC
Confidence 32 222345443333344578885 356 577765444
No 428
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=27.81 E-value=1.1e+02 Score=32.06 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHc--CcEEEEeccccc
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAV--GALLMMDMAHIS 290 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~--ga~livD~ah~~ 290 (385)
..++.+++.+.+.+.+|++|.++.. ++......++++.+|+. ++.+++=+.|.+
T Consensus 48 ~~~~~~~~~~~l~~~~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 48 GPLTDEKLVERLRAHCPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred cCCCHHHHHHHHHhcCcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 3466777777776678888876432 23223345677777776 888887776643
No 429
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=26.25 E-value=2.2e+02 Score=23.21 Aligned_cols=49 Identities=18% Similarity=0.097 Sum_probs=36.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
.++.++++..+.. +|.+|++|.-.+.... -+++.+..+++|+-+-+-.+
T Consensus 39 ~l~~e~l~~l~~~-~peiliiGTG~~~~~~-~~~~~~~l~~~gi~vE~m~T 87 (109)
T cd05560 39 DLTAAHFEALLAL-QPEVILLGTGERQRFP-PPALLAPLLARGIGVEVMDT 87 (109)
T ss_pred cCCHHHHHHHHhc-CCCEEEEecCCCCCcC-CHHHHHHHHHcCCeEEEECH
Confidence 6889999988865 6999999865555433 47788888889987766543
No 430
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=26.13 E-value=2.4e+02 Score=23.02 Aligned_cols=50 Identities=18% Similarity=0.064 Sum_probs=36.5
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
.++.+++...+...+|.+|++|.-..... .-+++.+..+++|+-+-+-.+
T Consensus 38 ~l~~~~l~~~~~~~~peiliiGTG~~~~~-~~~~~~~~l~~~gI~vE~m~T 87 (109)
T cd00248 38 DLDPEALLPLLAEDRPDILLIGTGAEIAF-LPRALRAALRAAGIGVEVMST 87 (109)
T ss_pred cCCHHHHHHHHhhCCCCEEEEcCCCCCCc-CCHHHHHHHHHcCCeEEEeCc
Confidence 68999999888652489999986555533 346788888899987765443
No 431
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=25.27 E-value=4.7e+02 Score=27.80 Aligned_cols=43 Identities=14% Similarity=0.242 Sum_probs=28.9
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHH--cCcEEEEe
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADA--VGALLMMD 285 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~--~ga~livD 285 (385)
..+..++..+++..+||+|++... .++++.+..++ ..++++.+
T Consensus 105 ~~~~~ei~~~~~~s~~kiif~d~~------~~~~i~~~~~~~~~~i~~l~~ 149 (537)
T KOG1176|consen 105 RLTASEIAKQLKDSKPKLIFVDED------FYDKISEATSKLALKIIVLTG 149 (537)
T ss_pred ccCHHHHHHHHHhcCCeEEEEcCc------hHHHHHHHHhhcCCceEEEec
Confidence 567788888888778999888643 34556555555 45555554
No 432
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=23.82 E-value=1.3e+02 Score=27.80 Aligned_cols=51 Identities=12% Similarity=0.147 Sum_probs=37.4
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
++++.++. .+.++++.+.+.+.+|++|.++...+....+++++.+..++.+
T Consensus 117 ~~Vi~LG~-----~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~ 167 (213)
T cd02069 117 YEVIDLGV-----MVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG 167 (213)
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC
Confidence 56666554 3678899888888899999887665555556777777777664
No 433
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=23.75 E-value=1.3e+02 Score=28.84 Aligned_cols=57 Identities=14% Similarity=0.253 Sum_probs=38.9
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEEc-----CCCCC-CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 235 TGL-VDYDMLEKTAIL----FRPKLIIAG-----ASAYP-RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~~-----~s~~~-~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
+|. .+++++...++. ..++++++. .++|+ ...|+..|..+.+..+..+++|.+|+.|
T Consensus 141 ~G~~~s~~e~~~A~e~i~~~Gn~~i~L~~rG~~t~~~Y~~~~vdl~~i~~lk~~~~~pV~~D~sHs~G 208 (266)
T PRK13398 141 RGMSATLEEWLYAAEYIMSEGNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCeEEEEECCCCCCCCCCHHHHHHHHHHHHHhccCCCEEEeCCCccc
Confidence 453 477777666543 245666653 24455 3457888888877779999999999876
No 434
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=23.69 E-value=89 Score=29.64 Aligned_cols=46 Identities=15% Similarity=0.114 Sum_probs=31.9
Q ss_pred CCC-CHHHHHHHhhhcCCcEEEEcCCCCCCCCCH-HHHHHHHHHcCcEEE
Q 016668 236 GLV-DYDMLEKTAILFRPKLIIAGASAYPRDFDY-PRMRQIADAVGALLM 283 (385)
Q Consensus 236 ~~i-D~d~le~~i~~~~pklIi~~~s~~~~~~dl-~~I~~ia~~~ga~li 283 (385)
|.+ |.+.+++.+++++.++|| +.+ -|+...+ +.+.+.|++.|+.++
T Consensus 50 G~lg~~~~l~~~l~~~~i~~vI-DAT-HPfA~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 50 GRLGDEEGLAEFLRENGIDAVI-DAT-HPFAAEISQNAIEACRELGIPYL 97 (249)
T ss_pred CCCCCHHHHHHHHHhCCCcEEE-ECC-CchHHHHHHHHHHHHhhcCcceE
Confidence 456 999999999877777664 544 3543333 346688888888766
No 435
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=22.80 E-value=2e+02 Score=24.31 Aligned_cols=52 Identities=15% Similarity=0.081 Sum_probs=33.3
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
.|+++..+. ...++++-+.+.+.++++|.++.........++++.+..++.|
T Consensus 30 GfeVi~lg~-----~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g 81 (132)
T TIGR00640 30 GFDVDVGPL-----FQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG 81 (132)
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC
Confidence 356666433 3567777666666689999886544334444677777777765
No 436
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=22.66 E-value=1.9e+02 Score=29.82 Aligned_cols=48 Identities=6% Similarity=0.071 Sum_probs=34.4
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCC-------CCC---C----HHHHHHHHHHcCcEEEE
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYP-------RDF---D----YPRMRQIADAVGALLMM 284 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~-------~~~---d----l~~I~~ia~~~ga~liv 284 (385)
..|++++.+.++..+|+++++++..+- -+. . -.+|.++||..|+.++.
T Consensus 154 Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 154 ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 368899999998889999998753211 111 1 24677899999988775
No 437
>PRK11823 DNA repair protein RadA; Provisional
Probab=22.50 E-value=1.3e+02 Score=31.11 Aligned_cols=47 Identities=11% Similarity=0.140 Sum_probs=31.7
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCC-------CCC-------HHHHHHHHHHcCcEEEE
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPR-------DFD-------YPRMRQIADAVGALLMM 284 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~-------~~d-------l~~I~~ia~~~ga~liv 284 (385)
-+++++.+.+++.+|++|++++-.... ... +.+|.++|+++|+.++.
T Consensus 143 ~~l~~i~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 143 TNLEAILATIEEEKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred CCHHHHHHHHHhhCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 467888888877789999997643211 111 23578889999985554
No 438
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=22.29 E-value=1.7e+02 Score=23.55 Aligned_cols=52 Identities=12% Similarity=-0.005 Sum_probs=34.7
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC--cEEEEecccc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG--ALLMMDMAHI 289 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g--a~livD~ah~ 289 (385)
...+++.+.+...+|++|.++.+......+++.+.++.++.+ +.+++=+.|.
T Consensus 37 ~~~~~~~~~i~~~~pdiV~iS~~~~~~~~~~~~~~~~~~~~p~~~~ivvGG~~~ 90 (125)
T cd02065 37 VPPEEIVEAAKEEDADVVGLSALSTTHMEAMKLVIEALKELGIDIPVVVGGAHP 90 (125)
T ss_pred CCHHHHHHHHHHcCCCEEEEecchHhHHHHHHHHHHHHHhcCCCCeEEEeCCcC
Confidence 355666666666789999886554433345677777777774 7777766553
No 439
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=22.14 E-value=2.2e+02 Score=25.52 Aligned_cols=46 Identities=20% Similarity=0.211 Sum_probs=20.7
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
+-.+++.++..+|+++++-.+. =+..+...|++.|+.++.=++..+
T Consensus 84 ~~~~~rfl~~~~P~~~i~~EtE-----lWPnll~~a~~~~ip~~LvNarls 129 (186)
T PF04413_consen 84 PWAVRRFLDHWRPDLLIWVETE-----LWPNLLREAKRRGIPVVLVNARLS 129 (186)
T ss_dssp HHHHHHHHHHH--SEEEEES---------HHHHHH-----S-EEEEEE---
T ss_pred HHHHHHHHHHhCCCEEEEEccc-----cCHHHHHHHhhcCCCEEEEeeeec
Confidence 4667777777789987664431 135677888888877665444333
No 440
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=22.02 E-value=1.9e+02 Score=22.54 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=31.9
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHH-HHHHHHHcCcEEEEecc
Q 016668 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPR-MRQIADAVGALLMMDMA 287 (385)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~~~~~dl~~-I~~ia~~~ga~livD~a 287 (385)
+.++.+.++..+.++|++.....+ ..+.. +..+|+++++.++.=.+
T Consensus 20 ~~~v~k~l~~~~~~lvilA~d~~~--~~~~~~l~~~c~~~~Ip~~~~~s 66 (95)
T PF01248_consen 20 IKEVLKALKKGKAKLVILAEDCSP--DSIKKHLPALCEEKNIPYVFVPS 66 (95)
T ss_dssp HHHHHHHHHTTCESEEEEETTSSS--GHHHHHHHHHHHHTTEEEEEESH
T ss_pred hHHHHHHHHcCCCcEEEEcCCCCh--hhhcccchhheeccceeEEEECC
Confidence 356777776667888888544333 24556 88999999998876543
No 441
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=21.26 E-value=1.5e+02 Score=29.87 Aligned_cols=47 Identities=9% Similarity=0.124 Sum_probs=32.0
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCC--C-----CCC-------HHHHHHHHHHcCcEEEE
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYP--R-----DFD-------YPRMRQIADAVGALLMM 284 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~--~-----~~d-------l~~I~~ia~~~ga~liv 284 (385)
.+++++.+.++..+|++|++++-.+. . ... +.+|.++|+++|+.++.
T Consensus 145 ~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 145 TNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred CcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 46888888887778999998763221 1 111 24577899999976654
No 442
>PLN00196 alpha-amylase; Provisional
Probab=20.94 E-value=65 Score=33.16 Aligned_cols=28 Identities=14% Similarity=0.275 Sum_probs=23.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...+++++++-||++|+-+|.|..
T Consensus 86 ~~fGt~~elk~Lv~~aH~~GIkVilDvV 113 (428)
T PLN00196 86 SKYGNEAQLKSLIEAFHGKGVQVIADIV 113 (428)
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 3456666899999999999999999975
No 443
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=20.66 E-value=1.5e+02 Score=31.25 Aligned_cols=51 Identities=24% Similarity=0.201 Sum_probs=36.9
Q ss_pred CCCCHHHHHHHhhhc----CCcEEEE---cCCCCCCCCCHHHHHHHHHHcC-cEEEEec
Q 016668 236 GLVDYDMLEKTAILF----RPKLIIA---GASAYPRDFDYPRMRQIADAVG-ALLMMDM 286 (385)
Q Consensus 236 ~~iD~d~le~~i~~~----~pklIi~---~~s~~~~~~dl~~I~~ia~~~g-a~livD~ 286 (385)
|.||...+++.+.+. |.-+|++ |.+..+....+-+|.++|+++. .||+.-+
T Consensus 272 griDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakfWLHasG 330 (838)
T KOG0630|consen 272 GRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKFWLHASG 330 (838)
T ss_pred ccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhheeEeecc
Confidence 479999999988642 3334433 5566677667899999999987 7777654
No 444
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=20.30 E-value=87 Score=32.86 Aligned_cols=96 Identities=13% Similarity=0.089 Sum_probs=52.3
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC-C
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA-S 260 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~-s 260 (385)
.....+|++.|=.++..+..|| |-...+ ..+...-..+..+++-. ....+.+..+.+++. ..+.|.++. +
T Consensus 243 ~~~~~~l~~ag~d~i~id~a~G-~s~~~~----~~i~~ik~~~~~~~v~a---G~V~t~~~a~~~~~a-Gad~I~vg~g~ 313 (495)
T PTZ00314 243 IERAAALIEAGVDVLVVDSSQG-NSIYQI----DMIKKLKSNYPHVDIIA---GNVVTADQAKNLIDA-GADGLRIGMGS 313 (495)
T ss_pred HHHHHHHHHCCCCEEEEecCCC-CchHHH----HHHHHHHhhCCCceEEE---CCcCCHHHHHHHHHc-CCCEEEECCcC
Confidence 3455677788877887776653 322110 11111111110112111 235678888888754 678876542 1
Q ss_pred C----------C--CCCCCHHHHHHHHHHcCcEEEEec
Q 016668 261 A----------Y--PRDFDYPRMRQIADAVGALLMMDM 286 (385)
Q Consensus 261 ~----------~--~~~~dl~~I~~ia~~~ga~livD~ 286 (385)
. . |....+.++.++|+++|+.+|.|+
T Consensus 314 Gs~~~t~~~~~~g~p~~~ai~~~~~~~~~~~v~vIadG 351 (495)
T PTZ00314 314 GSICITQEVCAVGRPQASAVYHVARYARERGVPCIADG 351 (495)
T ss_pred CcccccchhccCCCChHHHHHHHHHHHhhcCCeEEecC
Confidence 1 1 111234567788899999999996
Done!