Query 016668
Match_columns 385
No_of_seqs 278 out of 2733
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 17:26:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016668.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016668hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ou5_A Serine hydroxymethyltra 100.0 4.4E-79 1.5E-83 610.5 24.6 307 77-383 29-344 (490)
2 2a7v_A Serine hydroxymethyltra 100.0 1.7E-54 5.8E-59 445.2 23.1 304 80-383 32-344 (490)
3 1rv3_A Serine hydroxymethyltra 100.0 3.3E-48 1.1E-52 397.6 25.5 308 76-383 18-334 (483)
4 3h7f_A Serine hydroxymethyltra 100.0 8.8E-40 3E-44 331.1 25.6 289 79-382 22-310 (447)
5 3n0l_A Serine hydroxymethyltra 100.0 2.6E-37 9E-42 306.9 26.2 287 81-382 4-290 (417)
6 3gbx_A Serine hydroxymethyltra 100.0 3.7E-35 1.3E-39 291.3 23.6 287 83-382 11-297 (420)
7 3ecd_A Serine hydroxymethyltra 100.0 4.2E-35 1.4E-39 291.4 23.7 292 77-382 7-298 (425)
8 2vi8_A Serine hydroxymethyltra 100.0 1.7E-31 5.9E-36 263.9 25.5 282 83-379 4-285 (405)
9 2dkj_A Serine hydroxymethyltra 100.0 2.4E-31 8.2E-36 263.1 26.1 283 84-380 5-287 (407)
10 3hvy_A Cystathionine beta-lyas 99.9 8.4E-24 2.9E-28 213.6 19.7 230 85-343 15-270 (427)
11 3i16_A Aluminum resistance pro 99.9 1.5E-22 5.2E-27 204.4 16.5 230 86-343 18-270 (427)
12 3jzl_A Putative cystathionine 99.9 6.3E-21 2.1E-25 191.6 20.2 228 88-342 6-252 (409)
13 3zrp_A Serine-pyruvate aminotr 99.9 1.9E-21 6.4E-26 189.8 15.8 241 105-379 4-271 (384)
14 3nnk_A Ureidoglycine-glyoxylat 99.9 6.9E-21 2.4E-25 187.9 19.5 240 105-378 15-294 (411)
15 3isl_A Purine catabolism prote 99.9 1.1E-20 3.8E-25 186.7 21.1 240 105-378 13-294 (416)
16 3tqx_A 2-amino-3-ketobutyrate 99.9 6E-21 2E-25 187.7 17.7 223 114-367 58-293 (399)
17 2dr1_A PH1308 protein, 386AA l 99.9 2.4E-20 8.1E-25 182.3 20.9 226 109-369 26-275 (386)
18 2huf_A Alanine glyoxylate amin 99.9 1.2E-20 4E-25 185.4 18.6 240 105-378 21-287 (393)
19 1bs0_A Protein (8-amino-7-oxon 99.8 4.7E-20 1.6E-24 181.0 21.2 232 104-368 41-284 (384)
20 3f9t_A TDC, L-tyrosine decarbo 99.8 8.4E-20 2.9E-24 178.3 22.8 200 109-329 37-262 (397)
21 3cai_A Possible aminotransfera 99.8 2.4E-20 8.3E-25 184.2 19.0 233 111-369 35-284 (406)
22 3kgw_A Alanine-glyoxylate amin 99.8 2.1E-20 7E-25 183.0 18.1 242 104-379 24-292 (393)
23 3kki_A CAI-1 autoinducer synth 99.8 2.7E-20 9.1E-25 184.9 18.9 253 84-368 24-304 (409)
24 3ht4_A Aluminum resistance pro 99.8 6.7E-21 2.3E-25 192.6 14.6 235 84-342 8-258 (431)
25 1vjo_A Alanine--glyoxylate ami 99.8 4.8E-20 1.6E-24 181.3 19.7 239 106-378 37-299 (393)
26 3f0h_A Aminotransferase; RER07 99.8 5E-20 1.7E-24 179.8 19.6 234 103-370 19-273 (376)
27 2z9v_A Aspartate aminotransfer 99.8 5.4E-20 1.8E-24 180.6 19.8 226 109-369 15-265 (392)
28 1kmj_A Selenocysteine lyase; p 99.8 7.1E-20 2.4E-24 179.9 19.5 232 112-369 33-296 (406)
29 1u08_A Hypothetical aminotrans 99.8 2.5E-19 8.4E-24 176.2 22.4 259 81-367 10-284 (386)
30 2ch1_A 3-hydroxykynurenine tra 99.8 9.5E-20 3.2E-24 179.1 19.2 240 105-379 20-287 (396)
31 3lvm_A Cysteine desulfurase; s 99.8 5.2E-20 1.8E-24 182.8 17.3 234 109-368 29-279 (423)
32 1iug_A Putative aspartate amin 99.8 7.2E-20 2.5E-24 176.7 17.6 235 105-379 3-257 (352)
33 4hvk_A Probable cysteine desul 99.8 9.8E-20 3.3E-24 176.9 18.5 229 109-367 7-250 (382)
34 3dzz_A Putative pyridoxal 5'-p 99.8 4.6E-20 1.6E-24 180.8 15.9 230 111-366 38-283 (391)
35 1fc4_A 2-amino-3-ketobutyrate 99.8 9.3E-20 3.2E-24 179.9 18.1 223 114-368 60-296 (401)
36 2w8t_A SPT, serine palmitoyltr 99.8 2.4E-19 8.1E-24 179.7 21.0 222 114-368 79-312 (427)
37 1gd9_A Aspartate aminotransfer 99.8 3.1E-19 1E-23 175.5 21.4 257 80-365 4-279 (389)
38 2yrr_A Aminotransferase, class 99.8 6.1E-20 2.1E-24 176.7 15.9 240 105-379 2-260 (353)
39 1m32_A 2-aminoethylphosphonate 99.8 7.7E-20 2.6E-24 176.9 15.9 231 105-369 6-260 (366)
40 4eb5_A Probable cysteine desul 99.8 1.4E-19 4.9E-24 176.5 17.7 233 110-368 8-251 (382)
41 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 4.3E-20 1.5E-24 179.8 13.8 230 109-367 16-264 (371)
42 2o0r_A RV0858C (N-succinyldiam 99.8 3.1E-19 1.1E-23 177.3 20.2 236 80-342 4-257 (411)
43 3ju7_A Putative PLP-dependent 99.8 5.2E-20 1.8E-24 182.4 14.5 204 105-345 5-217 (377)
44 4dq6_A Putative pyridoxal phos 99.8 2.1E-19 7.1E-24 176.1 18.4 236 103-366 33-287 (391)
45 1c7n_A Cystalysin; transferase 99.8 2.7E-19 9.1E-24 176.5 19.0 235 104-366 33-287 (399)
46 3hbx_A GAD 1, glutamate decarb 99.8 4.4E-19 1.5E-23 182.3 21.1 249 111-382 65-350 (502)
47 3ly1_A Putative histidinol-pho 99.8 6.8E-19 2.3E-23 170.6 20.9 225 104-365 18-257 (354)
48 2dou_A Probable N-succinyldiam 99.8 2.5E-19 8.6E-24 175.5 17.9 254 85-365 3-276 (376)
49 1v2d_A Glutamine aminotransfer 99.8 4.8E-19 1.7E-23 173.8 19.9 253 80-367 4-270 (381)
50 3a9z_A Selenocysteine lyase; P 99.8 1.4E-19 4.9E-24 180.5 15.8 237 111-367 27-300 (432)
51 3a2b_A Serine palmitoyltransfe 99.8 4E-19 1.4E-23 175.4 18.8 231 105-367 46-290 (398)
52 3fvs_A Kynurenine--oxoglutarat 99.8 5E-19 1.7E-23 175.9 19.5 262 79-366 6-294 (422)
53 1yiz_A Kynurenine aminotransfe 99.8 1.9E-18 6.5E-23 172.4 23.6 260 80-366 16-302 (429)
54 1o4s_A Aspartate aminotransfer 99.8 7.5E-19 2.6E-23 173.5 20.3 212 104-343 43-271 (389)
55 1j32_A Aspartate aminotransfer 99.8 1.2E-18 4E-23 171.2 21.5 234 104-365 32-283 (388)
56 1t3i_A Probable cysteine desul 99.8 1E-18 3.5E-23 172.6 21.1 230 113-368 39-299 (420)
57 1b5p_A Protein (aspartate amin 99.8 2.3E-18 8E-23 169.7 23.4 234 104-365 33-280 (385)
58 2bkw_A Alanine-glyoxylate amin 99.8 1.7E-19 5.9E-24 176.2 15.0 200 104-329 6-217 (385)
59 3h14_A Aminotransferase, class 99.8 1.3E-18 4.3E-23 171.4 21.3 233 103-365 32-276 (391)
60 3n75_A LDC, lysine decarboxyla 99.8 9.9E-20 3.4E-24 193.9 14.0 208 153-382 200-431 (715)
61 1eg5_A Aminotransferase; PLP-d 99.8 8.9E-19 3E-23 170.8 19.6 233 110-367 9-254 (384)
62 3vax_A Putative uncharacterize 99.8 9.4E-20 3.2E-24 179.4 12.7 234 109-368 27-279 (400)
63 2x5d_A Probable aminotransfera 99.8 8.8E-19 3E-23 174.1 19.7 262 80-366 11-292 (412)
64 3mc6_A Sphingosine-1-phosphate 99.8 2E-19 6.7E-24 183.6 15.2 246 115-382 77-353 (497)
65 3dr4_A Putative perosamine syn 99.8 1.3E-19 4.6E-24 178.6 13.5 202 105-342 25-229 (391)
66 2z61_A Probable aspartate amin 99.8 1.2E-18 4.2E-23 170.2 20.2 227 104-365 31-268 (370)
67 1elu_A L-cysteine/L-cystine C- 99.8 2.1E-19 7E-24 175.9 14.5 236 111-371 25-293 (390)
68 3get_A Histidinol-phosphate am 99.8 2.9E-19 9.8E-24 174.2 15.4 226 103-365 31-271 (365)
69 3ffh_A Histidinol-phosphate am 99.8 3E-18 1E-22 166.9 21.9 247 80-365 7-269 (363)
70 1b9h_A AHBA synthase, protein 99.8 1.4E-18 4.9E-23 170.8 19.8 188 114-329 15-203 (388)
71 3nyt_A Aminotransferase WBPE; 99.8 4.3E-19 1.5E-23 173.9 15.8 198 109-343 9-210 (367)
72 3euc_A Histidinol-phosphate am 99.8 1.8E-18 6E-23 168.7 20.1 227 103-366 31-271 (367)
73 3l8a_A METC, putative aminotra 99.8 4.6E-19 1.6E-23 177.0 16.2 236 105-366 64-317 (421)
74 3e2y_A Kynurenine-oxoglutarate 99.8 9.7E-19 3.3E-23 172.9 17.8 261 81-366 3-287 (410)
75 3kax_A Aminotransferase, class 99.8 1E-18 3.4E-23 170.8 17.6 235 105-366 27-279 (383)
76 1gc0_A Methionine gamma-lyase; 99.8 1.5E-18 5E-23 172.5 19.0 195 104-329 29-229 (398)
77 3frk_A QDTB; aminotransferase, 99.8 2.6E-19 8.8E-24 175.4 13.1 192 113-342 14-210 (373)
78 3dyd_A Tyrosine aminotransfera 99.8 2.3E-18 7.7E-23 172.6 19.9 229 112-366 70-316 (427)
79 3ele_A Amino transferase; RER0 99.8 6.8E-18 2.3E-22 166.4 23.0 207 105-330 38-266 (398)
80 3b46_A Aminotransferase BNA3; 99.8 1.1E-18 3.9E-23 175.9 17.7 255 86-367 33-323 (447)
81 3nra_A Aspartate aminotransfer 99.8 7.3E-19 2.5E-23 173.4 16.0 209 113-343 53-278 (407)
82 1xi9_A Putative transaminase; 99.8 1.2E-18 4.3E-23 172.7 17.6 238 104-365 40-296 (406)
83 3mad_A Sphingosine-1-phosphate 99.8 1.1E-17 3.9E-22 171.6 25.1 222 143-382 134-385 (514)
84 3p1t_A Putative histidinol-pho 99.8 3.4E-18 1.2E-22 164.3 19.8 227 95-365 9-242 (337)
85 1d2f_A MALY protein; aminotran 99.8 5.8E-18 2E-22 166.6 21.8 234 104-366 30-283 (390)
86 2o1b_A Aminotransferase, class 99.8 5E-19 1.7E-23 175.9 14.3 261 81-366 24-300 (404)
87 1c4k_A Protein (ornithine deca 99.8 3.5E-19 1.2E-23 190.6 13.4 216 153-382 178-427 (730)
88 2oga_A Transaminase; PLP-depen 99.8 2.5E-18 8.4E-23 170.5 18.6 200 105-342 33-237 (399)
89 2dgk_A GAD-beta, GADB, glutama 99.8 3.5E-18 1.2E-22 172.5 19.8 199 112-329 52-278 (452)
90 1o69_A Aminotransferase; struc 99.8 5.8E-18 2E-22 167.7 20.9 196 113-342 9-207 (394)
91 2gb3_A Aspartate aminotransfer 99.8 1.2E-18 4.1E-23 173.1 16.0 234 103-365 44-290 (409)
92 2vyc_A Biodegradative arginine 99.8 1.5E-18 5.2E-23 186.6 17.8 213 153-382 210-453 (755)
93 3ffr_A Phosphoserine aminotran 99.8 1.1E-18 3.9E-23 168.7 15.2 241 104-377 5-269 (362)
94 3vp6_A Glutamate decarboxylase 99.8 7.1E-18 2.4E-22 173.7 21.2 176 142-329 129-332 (511)
95 3jtx_A Aminotransferase; NP_28 99.8 6.3E-18 2.2E-22 166.3 19.8 256 81-365 4-291 (396)
96 1mdo_A ARNB aminotransferase; 99.8 2.9E-18 9.8E-23 168.6 17.2 190 114-342 18-211 (393)
97 2c81_A Glutamine-2-deoxy-scyll 99.8 3.6E-18 1.2E-22 170.1 17.8 200 111-341 11-214 (418)
98 2fq6_A Cystathionine beta-lyas 99.8 4.5E-18 1.5E-22 171.0 18.6 168 133-329 73-248 (415)
99 2aeu_A Hypothetical protein MJ 99.8 2.4E-18 8.1E-23 170.0 16.2 212 110-367 38-254 (374)
100 3ke3_A Putative serine-pyruvat 99.8 1.8E-18 6.1E-23 170.6 15.1 212 142-377 30-278 (379)
101 2po3_A 4-dehydrase; external a 99.8 3.8E-18 1.3E-22 170.4 17.6 195 110-342 26-223 (424)
102 3ezs_A Aminotransferase ASPB; 99.8 1E-17 3.6E-22 163.6 20.2 248 86-365 4-277 (376)
103 3uwc_A Nucleotide-sugar aminot 99.8 2.5E-18 8.6E-23 167.9 15.2 197 106-342 10-211 (374)
104 1e5e_A MGL, methionine gamma-l 99.8 5.6E-18 1.9E-22 169.1 17.8 170 142-344 60-237 (404)
105 3fdb_A Beta C-S lyase, putativ 99.8 1.2E-17 4E-22 163.0 19.6 232 104-366 25-271 (377)
106 3cq5_A Histidinol-phosphate am 99.8 4.8E-17 1.7E-21 159.2 24.0 231 105-365 33-275 (369)
107 2fnu_A Aminotransferase; prote 99.8 3.3E-18 1.1E-22 166.7 15.6 193 110-342 7-206 (375)
108 3g0t_A Putative aminotransfera 99.8 2.2E-17 7.4E-22 164.7 21.7 240 103-367 45-326 (437)
109 2rfv_A Methionine gamma-lyase; 99.8 4.7E-18 1.6E-22 168.5 16.5 184 153-365 69-259 (398)
110 1qgn_A Protein (cystathionine 99.8 9.2E-18 3.1E-22 170.3 18.7 168 142-342 112-286 (445)
111 2zc0_A Alanine glyoxylate tran 99.8 4.4E-17 1.5E-21 161.0 21.9 223 114-365 50-292 (407)
112 1qz9_A Kynureninase; kynurenin 99.8 3.4E-18 1.2E-22 169.3 13.9 235 111-379 37-310 (416)
113 2z67_A O-phosphoseryl-tRNA(SEC 99.8 2E-18 6.9E-23 175.0 12.4 248 109-379 87-355 (456)
114 3rq1_A Aminotransferase class 99.8 1.5E-17 5.2E-22 165.3 17.5 233 83-342 14-289 (418)
115 2bwn_A 5-aminolevulinate synth 99.8 4.6E-17 1.6E-21 160.8 20.7 231 114-378 61-306 (401)
116 3ndn_A O-succinylhomoserine su 99.8 1.2E-17 4.1E-22 167.7 16.8 168 133-329 72-245 (414)
117 3qhx_A Cystathionine gamma-syn 99.8 2.2E-17 7.6E-22 164.1 18.2 169 142-342 64-238 (392)
118 1jg8_A L-ALLO-threonine aldola 99.7 6.1E-18 2.1E-22 163.4 13.4 196 113-340 15-223 (347)
119 3b8x_A WBDK, pyridoxamine 5-ph 99.7 1.2E-16 4.2E-21 157.4 22.9 187 110-329 9-205 (390)
120 1bw0_A TAT, protein (tyrosine 99.7 3.3E-17 1.1E-21 162.6 18.0 231 111-365 48-304 (416)
121 3cog_A Cystathionine gamma-lya 99.7 1.5E-17 5.1E-22 166.1 15.6 169 142-343 65-240 (403)
122 3e9k_A Kynureninase; kynurenin 99.7 1E-18 3.6E-23 176.7 7.2 199 151-369 114-351 (465)
123 1pff_A Methionine gamma-lyase; 99.7 2.7E-17 9.2E-22 158.3 16.7 165 153-346 3-175 (331)
124 2okj_A Glutamate decarboxylase 99.7 5.9E-17 2E-21 166.0 20.2 174 144-329 128-329 (504)
125 3aow_A Putative uncharacterize 99.7 8.4E-17 2.9E-21 162.7 20.9 257 78-365 53-334 (448)
126 3pj0_A LMO0305 protein; struct 99.7 1.3E-17 4.5E-22 161.8 14.5 207 100-342 11-230 (359)
127 3ri6_A O-acetylhomoserine sulf 99.7 1.7E-17 5.9E-22 167.5 15.8 168 133-329 73-246 (430)
128 2c0r_A PSAT, phosphoserine ami 99.7 1.4E-18 4.9E-23 169.3 7.3 245 105-379 6-268 (362)
129 4e1o_A HDC, histidine decarbox 99.7 3.8E-17 1.3E-21 166.9 18.0 202 110-329 87-325 (481)
130 1wyu_B Glycine dehydrogenase s 99.7 4.8E-17 1.6E-21 165.6 18.6 165 146-329 105-287 (474)
131 2jis_A Cysteine sulfinic acid 99.7 1.4E-16 4.6E-21 163.9 22.0 173 143-329 143-343 (515)
132 3e77_A Phosphoserine aminotran 99.7 3.5E-18 1.2E-22 169.8 9.6 234 109-370 19-268 (377)
133 3t18_A Aminotransferase class 99.7 2E-17 6.9E-22 164.1 14.7 232 85-342 15-288 (413)
134 3m5u_A Phosphoserine aminotran 99.7 1.8E-17 6.1E-22 163.8 13.9 234 103-373 5-260 (361)
135 2r2n_A Kynurenine/alpha-aminoa 99.7 3.2E-16 1.1E-20 156.6 23.2 198 148-366 82-309 (425)
136 1v72_A Aldolase; PLP-dependent 99.7 3E-17 1E-21 158.5 15.1 190 113-328 19-226 (356)
137 1svv_A Threonine aldolase; str 99.7 5E-17 1.7E-21 156.9 16.6 190 113-329 25-231 (359)
138 1vp4_A Aminotransferase, putat 99.7 6.5E-17 2.2E-21 161.5 17.6 223 114-366 59-306 (425)
139 3piu_A 1-aminocyclopropane-1-c 99.7 1.2E-16 4.2E-21 159.9 19.5 177 148-343 90-299 (435)
140 3acz_A Methionine gamma-lyase; 99.7 7.7E-17 2.6E-21 159.8 17.8 176 133-342 50-231 (389)
141 2x3l_A ORN/Lys/Arg decarboxyla 99.7 5.2E-18 1.8E-22 171.7 9.5 195 153-369 62-263 (446)
142 1iay_A ACC synthase 2, 1-amino 99.7 1.5E-16 5.3E-21 158.6 20.1 177 148-343 87-294 (428)
143 3qm2_A Phosphoserine aminotran 99.7 1.1E-18 3.7E-23 174.0 4.4 238 105-370 29-283 (386)
144 2ez2_A Beta-tyrosinase, tyrosi 99.7 1.3E-16 4.4E-21 160.5 19.1 225 113-374 55-316 (456)
145 2zyj_A Alpha-aminodipate amino 99.7 3.7E-17 1.3E-21 161.4 14.9 218 114-365 48-283 (397)
146 4f4e_A Aromatic-amino-acid ami 99.7 2.2E-16 7.6E-21 157.4 20.4 231 79-326 24-283 (420)
147 3k40_A Aromatic-L-amino-acid d 99.7 1.3E-16 4.4E-21 162.9 18.8 177 141-329 106-318 (475)
148 1cs1_A CGS, protein (cystathio 99.7 2.2E-16 7.6E-21 155.7 19.6 162 154-343 58-225 (386)
149 3op7_A Aminotransferase class 99.7 5.9E-17 2E-21 158.3 15.3 191 148-365 67-268 (375)
150 3hdo_A Histidinol-phosphate am 99.7 9.8E-17 3.3E-21 156.3 16.7 221 104-365 28-258 (360)
151 3nmy_A Xometc, cystathionine g 99.7 9.2E-17 3.1E-21 160.6 15.8 175 133-342 58-240 (400)
152 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.7 3.9E-16 1.3E-20 156.7 20.1 187 110-329 37-235 (437)
153 3qgu_A LL-diaminopimelate amin 99.7 1.9E-16 6.4E-21 159.0 17.7 197 104-330 71-300 (449)
154 1js3_A DDC;, DOPA decarboxylas 99.7 1.4E-16 4.9E-21 162.2 16.4 198 114-329 86-319 (486)
155 1ibj_A CBL, cystathionine beta 99.7 1.3E-16 4.6E-21 162.5 15.9 168 142-342 131-304 (464)
156 2ctz_A O-acetyl-L-homoserine s 99.7 2.2E-16 7.7E-21 158.3 16.9 190 107-327 25-222 (421)
157 3lws_A Aromatic amino acid bet 99.7 1.1E-16 3.9E-21 155.3 14.2 207 103-341 11-227 (357)
158 3tcm_A Alanine aminotransferas 99.7 1.7E-15 5.8E-20 155.3 23.5 225 114-364 107-365 (500)
159 1n8p_A Cystathionine gamma-lya 99.7 1.6E-16 5.4E-21 158.1 15.1 161 153-343 60-230 (393)
160 3ei9_A LL-diaminopimelate amin 99.7 2E-16 6.8E-21 158.0 15.5 225 80-329 27-287 (432)
161 1fg7_A Histidinol phosphate am 99.7 4.4E-16 1.5E-20 152.0 17.1 184 154-365 64-258 (356)
162 3if2_A Aminotransferase; YP_26 99.7 1.1E-15 3.8E-20 153.0 20.2 184 148-343 87-300 (444)
163 2qma_A Diaminobutyrate-pyruvat 99.7 4.1E-16 1.4E-20 159.5 17.0 198 112-329 110-341 (497)
164 3b1d_A Betac-S lyase; HET: PLP 99.5 2.4E-18 8.1E-23 169.9 0.0 224 113-365 44-286 (392)
165 1lc5_A COBD, L-threonine-O-3-p 99.7 7.9E-16 2.7E-20 150.0 17.7 222 104-365 26-261 (364)
166 2cb1_A O-acetyl homoserine sul 99.7 2E-15 6.9E-20 150.6 20.2 160 142-328 54-219 (412)
167 1yaa_A Aspartate aminotransfer 99.7 3.8E-16 1.3E-20 154.8 14.8 228 113-366 47-312 (412)
168 3k7y_A Aspartate aminotransfer 99.7 1.4E-15 4.7E-20 152.4 18.6 227 81-326 6-263 (405)
169 7aat_A Aspartate aminotransfer 99.7 1.3E-15 4.4E-20 150.3 17.8 227 83-327 7-265 (401)
170 3fsl_A Aromatic-amino-acid ami 99.7 1.9E-15 6.5E-20 148.5 18.8 195 115-327 46-262 (397)
171 3ftb_A Histidinol-phosphate am 99.7 7.4E-16 2.5E-20 149.4 15.6 220 103-365 27-260 (361)
172 2x5f_A Aspartate_tyrosine_phen 99.7 4.5E-16 1.5E-20 155.3 14.3 240 103-365 48-324 (430)
173 4adb_A Succinylornithine trans 99.7 1.9E-15 6.5E-20 149.0 18.4 218 114-372 56-304 (406)
174 3meb_A Aspartate aminotransfer 99.7 3.2E-15 1.1E-19 150.8 20.1 226 81-326 26-293 (448)
175 4eu1_A Mitochondrial aspartate 99.7 8.7E-16 3E-20 152.3 14.9 228 80-328 17-276 (409)
176 1w23_A Phosphoserine aminotran 99.7 7.9E-17 2.7E-21 156.2 7.1 228 105-368 5-255 (360)
177 3asa_A LL-diaminopimelate amin 99.7 1.9E-15 6.4E-20 149.6 16.7 218 80-329 4-253 (400)
178 1vef_A Acetylornithine/acetyl- 99.6 3.1E-15 1E-19 147.3 18.0 224 113-368 61-302 (395)
179 3d6k_A Putative aminotransfera 99.6 5E-16 1.7E-20 155.1 11.8 233 78-343 9-282 (422)
180 2q7w_A Aspartate aminotransfer 99.6 2E-15 6.8E-20 148.4 15.6 194 113-326 44-260 (396)
181 1ajs_A Aspartate aminotransfer 99.6 1.6E-15 5.4E-20 150.2 14.9 227 81-326 7-272 (412)
182 3ruy_A Ornithine aminotransfer 99.6 7.9E-15 2.7E-19 144.2 19.8 221 114-372 53-304 (392)
183 3ihj_A Alanine aminotransferas 99.6 2.5E-15 8.5E-20 154.2 15.5 214 105-343 94-345 (498)
184 1s0a_A Adenosylmethionine-8-am 99.6 2.7E-14 9.2E-19 142.5 22.5 242 114-375 60-335 (429)
185 3f6t_A Aspartate aminotransfer 99.6 9.4E-15 3.2E-19 151.2 19.5 194 115-329 117-330 (533)
186 2oat_A Ornithine aminotransfer 99.6 9.3E-15 3.2E-19 147.3 18.6 221 114-373 93-346 (439)
187 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 1E-15 3.4E-20 154.8 11.0 192 142-349 92-296 (450)
188 2ay1_A Aroat, aromatic amino a 99.6 4.2E-15 1.4E-19 146.1 15.2 191 113-326 44-257 (394)
189 1ax4_A Tryptophanase; tryptoph 99.6 5E-15 1.7E-19 149.2 16.0 226 116-369 55-321 (467)
190 3ez1_A Aminotransferase MOCR f 99.6 2.4E-15 8.2E-20 149.6 13.0 231 81-343 5-277 (423)
191 1z7d_A Ornithine aminotransfer 99.6 2E-14 7E-19 144.4 19.8 222 114-372 82-334 (433)
192 1uu1_A Histidinol-phosphate am 99.6 5.1E-15 1.7E-19 142.8 14.8 214 105-366 22-247 (335)
193 2oqx_A Tryptophanase; lyase, p 99.6 2.4E-15 8.2E-20 151.5 12.6 190 116-329 53-281 (467)
194 3hl2_A O-phosphoseryl-tRNA(SEC 99.6 9.2E-16 3.2E-20 154.4 9.3 212 148-379 117-341 (501)
195 2pb2_A Acetylornithine/succiny 99.6 1.6E-14 5.6E-19 144.4 18.1 219 114-372 74-322 (420)
196 3g7q_A Valine-pyruvate aminotr 99.6 1E-14 3.5E-19 144.3 16.0 181 147-343 78-274 (417)
197 4h51_A Aspartate aminotransfer 99.6 2.2E-14 7.4E-19 144.4 18.6 228 83-329 24-282 (420)
198 2eh6_A Acoat, acetylornithine 99.6 3.6E-14 1.2E-18 138.4 19.2 222 114-367 45-288 (375)
199 3ppl_A Aspartate aminotransfer 99.6 1.9E-14 6.5E-19 143.5 17.4 166 155-343 85-284 (427)
200 1sff_A 4-aminobutyrate aminotr 99.6 2.2E-14 7.6E-19 142.4 17.7 232 114-373 58-321 (426)
201 2zy4_A L-aspartate beta-decarb 99.6 2.4E-14 8.1E-19 148.7 17.9 196 113-329 116-332 (546)
202 2ord_A Acoat, acetylornithine 99.6 1.7E-14 5.8E-19 142.2 15.5 218 114-372 57-303 (397)
203 3a8u_X Omega-amino acid--pyruv 99.6 6.3E-14 2.1E-18 140.8 19.3 233 114-374 67-352 (449)
204 3l44_A Glutamate-1-semialdehyd 99.6 9E-14 3.1E-18 138.9 20.2 226 114-373 72-326 (434)
205 3nx3_A Acoat, acetylornithine 99.6 6.4E-14 2.2E-18 138.0 18.6 228 114-374 53-303 (395)
206 3dxv_A Alpha-amino-epsilon-cap 99.6 9.7E-14 3.3E-18 138.9 19.8 230 114-372 60-321 (439)
207 3i4j_A Aminotransferase, class 99.6 2.1E-13 7E-18 136.1 20.3 231 115-373 47-319 (430)
208 1wyu_A Glycine dehydrogenase ( 99.6 1.8E-14 6.2E-19 144.7 12.7 161 147-329 107-277 (438)
209 3n5m_A Adenosylmethionine-8-am 99.6 7.8E-13 2.7E-17 133.0 24.5 238 114-373 66-344 (452)
210 3fkd_A L-threonine-O-3-phospha 99.5 1E-13 3.5E-18 134.1 16.9 215 103-366 16-242 (350)
211 3fq8_A Glutamate-1-semialdehyd 99.5 6.1E-13 2.1E-17 132.6 22.9 224 114-375 69-325 (427)
212 1zod_A DGD, 2,2-dialkylglycine 99.5 4.2E-13 1.5E-17 133.8 20.5 236 114-374 60-328 (433)
213 2epj_A Glutamate-1-semialdehyd 99.5 3.1E-13 1.1E-17 135.1 19.5 226 114-372 73-326 (434)
214 2fyf_A PSAT, phosphoserine ami 99.5 5E-14 1.7E-18 139.2 13.2 227 103-370 40-293 (398)
215 3gju_A Putative aminotransfera 99.5 2E-12 6.8E-17 130.7 23.8 240 114-372 68-350 (460)
216 4e77_A Glutamate-1-semialdehyd 99.5 2.8E-12 9.7E-17 128.0 23.3 231 114-375 70-326 (429)
217 3tfu_A Adenosylmethionine-8-am 99.5 7.1E-13 2.4E-17 134.4 18.6 239 114-374 92-363 (457)
218 2eo5_A 419AA long hypothetical 99.5 7.2E-13 2.5E-17 132.1 18.3 230 115-367 61-327 (419)
219 3k28_A Glutamate-1-semialdehyd 99.5 8E-13 2.7E-17 132.1 18.5 220 114-367 70-318 (429)
220 4a6r_A Omega transaminase; tra 99.5 1.2E-12 4.1E-17 132.2 19.4 238 114-372 67-344 (459)
221 2e7u_A Glutamate-1-semialdehyd 99.5 1E-12 3.6E-17 130.9 18.6 224 114-369 69-318 (424)
222 3dod_A Adenosylmethionine-8-am 99.5 2.2E-12 7.5E-17 129.8 20.9 229 114-372 61-340 (448)
223 2cy8_A D-phgat, D-phenylglycin 99.5 6.1E-13 2.1E-17 133.9 16.8 226 114-373 74-327 (453)
224 3i5t_A Aminotransferase; pyrid 99.5 5.3E-12 1.8E-16 128.6 22.9 243 114-376 71-355 (476)
225 3hmu_A Aminotransferase, class 99.4 3.9E-12 1.3E-16 129.5 20.1 232 114-372 72-347 (472)
226 3oks_A 4-aminobutyrate transam 99.4 1E-11 3.4E-16 125.4 21.4 239 114-372 78-348 (451)
227 4ffc_A 4-aminobutyrate aminotr 99.4 4.8E-12 1.6E-16 127.9 18.7 238 114-372 81-346 (453)
228 2cjg_A L-lysine-epsilon aminot 99.4 2.7E-12 9.3E-17 129.5 16.0 228 114-373 71-354 (449)
229 3bwn_A AT1G70560, L-tryptophan 99.3 1.5E-11 5E-16 121.8 11.7 183 148-366 72-265 (391)
230 2hox_A ALLIIN lyase 1; cystein 99.2 1E-11 3.6E-16 124.6 8.0 179 147-366 103-299 (427)
231 2yky_A Beta-transaminase; tran 98.8 1.2E-12 4E-17 133.4 0.0 220 114-372 117-357 (465)
232 4ao9_A Beta-phenylalanine amin 99.2 5.4E-10 1.8E-14 113.4 19.5 225 115-373 105-344 (454)
233 1ohv_A 4-aminobutyrate aminotr 99.2 2.4E-10 8.1E-15 116.2 13.7 228 114-372 80-376 (472)
234 4atq_A 4-aminobutyrate transam 98.8 5.6E-07 1.9E-11 91.2 23.4 238 114-376 81-351 (456)
235 4e3q_A Pyruvate transaminase; 98.4 1.2E-05 4.2E-10 81.7 18.0 235 114-376 84-369 (473)
236 4a0g_A Adenosylmethionine-8-am 98.3 1.8E-05 6.3E-10 85.8 18.1 121 241-371 577-722 (831)
237 2yxb_A Coenzyme B12-dependent 41.1 22 0.00075 29.9 3.8 51 224-279 47-97 (161)
238 1xrs_B D-lysine 5,6-aminomutas 37.8 53 0.0018 30.1 6.1 59 223-286 157-222 (262)
239 1vli_A Spore coat polysacchari 36.9 50 0.0017 32.1 6.0 90 235-328 165-267 (385)
240 2wqp_A Polysialic acid capsule 36.3 33 0.0011 32.9 4.6 90 235-328 155-255 (349)
241 1y80_A Predicted cobalamin bin 33.9 47 0.0016 28.8 4.9 58 224-286 117-178 (210)
242 2ab1_A Hypothetical protein; H 32.5 1E+02 0.0035 24.7 6.3 50 237-287 48-97 (122)
243 4gqr_A Pancreatic alpha-amylas 30.2 18 0.00062 35.2 1.7 28 260-287 71-98 (496)
244 3q58_A N-acetylmannosamine-6-p 29.4 1.2E+02 0.0042 26.8 7.0 48 239-287 90-137 (229)
245 3igs_A N-acetylmannosamine-6-p 29.0 1.3E+02 0.0043 26.8 7.0 47 239-286 90-136 (232)
246 3nvt_A 3-deoxy-D-arabino-heptu 28.4 56 0.0019 31.7 4.8 57 235-291 256-323 (385)
247 1vr6_A Phospho-2-dehydro-3-deo 28.3 53 0.0018 31.5 4.5 57 235-291 220-287 (350)
248 1ccw_A Protein (glutamate muta 25.7 36 0.0012 27.7 2.4 51 224-279 32-82 (137)
249 1lwj_A 4-alpha-glucanotransfer 25.4 29 0.001 33.8 2.2 28 260-287 64-91 (441)
250 3ghf_A Septum site-determining 25.4 90 0.0031 24.8 4.8 46 238-283 25-78 (120)
251 1vs1_A 3-deoxy-7-phosphoheptul 25.1 90 0.0031 28.7 5.4 57 235-291 152-219 (276)
252 4aie_A Glucan 1,6-alpha-glucos 25.1 30 0.001 34.4 2.2 27 261-287 75-101 (549)
253 1zco_A 2-dehydro-3-deoxyphosph 25.1 98 0.0034 28.2 5.6 58 235-292 137-205 (262)
254 3bh4_A Alpha-amylase; calcium, 24.5 31 0.001 34.1 2.1 28 260-287 73-100 (483)
255 1wpc_A Glucan 1,4-alpha-maltoh 24.0 32 0.0011 34.0 2.1 28 260-287 77-104 (485)
256 1ud2_A Amylase, alpha-amylase; 23.5 33 0.0011 33.8 2.1 28 260-287 75-102 (480)
257 1g94_A Alpha-amylase; beta-alp 23.0 30 0.001 33.9 1.7 28 260-287 59-86 (448)
258 1hvx_A Alpha-amylase; hydrolas 22.8 34 0.0012 34.2 2.1 28 260-287 76-103 (515)
259 1ht6_A AMY1, alpha-amylase iso 22.6 36 0.0012 32.8 2.2 28 260-287 63-90 (405)
260 2guy_A Alpha-amylase A; (beta- 22.5 35 0.0012 33.5 2.1 28 260-287 92-119 (478)
261 1mxg_A Alpha amylase; hyperthe 22.2 36 0.0012 33.2 2.1 28 260-287 81-108 (435)
262 1iv0_A Hypothetical protein; r 22.1 1.6E+02 0.0056 22.4 5.5 51 237-287 37-94 (98)
263 1gcy_A Glucan 1,4-alpha-maltot 22.1 37 0.0013 34.1 2.2 28 260-287 87-114 (527)
264 2aaa_A Alpha-amylase; glycosid 20.5 39 0.0013 33.3 1.9 28 260-287 92-119 (484)
265 2duw_A Putative COA-binding pr 20.2 1.1E+02 0.0038 24.8 4.5 46 241-294 85-130 (145)
No 1
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=100.00 E-value=4.4e-79 Score=610.45 Aligned_cols=307 Identities=62% Similarity=1.023 Sum_probs=257.9
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016668 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (385)
Q Consensus 77 ~~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~ 156 (385)
+.....|++.||+++++|++|+.||+.+|+||||||++|+.|+++++|+|+|+|+|||||.|||+||+++|++|.+|++|
T Consensus 29 ~~~~~~l~~~Dpei~~~i~~E~~RQ~~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~r 108 (490)
T 3ou5_A 29 WTGQESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRR 108 (490)
T ss_dssp CSSCCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHH
T ss_pred cccccchhhhCHHHHHHHHHHHHHHHcCceEecCCCcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHH
Confidence 33467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
++++||+++++|+|||||.||+.||++++.+|++|||+||.+++.+|||++||+++...++++.|..|+.++|++|++++
T Consensus 109 ak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~ 188 (490)
T 3ou5_A 109 ALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTG 188 (490)
T ss_dssp HHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEETTTT
T ss_pred HHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999876556788999999999999999999
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l 316 (385)
.||+|+++++++++|||+|++|.|.|++.+|++++++||+++|++|++|+||.+||+++|.+|+|+++|||+|+||||||
T Consensus 189 ~IDyd~~~~~A~~~kPklIi~G~SaY~r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTL 268 (490)
T 3ou5_A 189 LIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTL 268 (490)
T ss_dssp EECHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTT
T ss_pred cccHHHHHHHHhhcCCCeEEECCccCccccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccEEEEEEeCCCC---------chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 317 RGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 317 ~GprgG~I~~~~~~~---------~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
+|||||+|+++++.. ..+++.++|++++||++|||||+|.|||+|+||+|+++++|++|++||++|.
T Consensus 269 rGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NA 344 (490)
T 3ou5_A 269 RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNA 344 (490)
T ss_dssp CSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred cCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 999999999998521 2346899999999999999999999999999999999999999999999984
No 2
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=100.00 E-value=1.7e-54 Score=445.19 Aligned_cols=304 Identities=62% Similarity=1.043 Sum_probs=241.9
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALA 159 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~ 159 (385)
..+|+++||+++++|++|+.||+++|+||+|||++|+.|++++.+.++++|++|||++|||+|+++++++|++|++++++
T Consensus 32 ~~~l~~~d~~~~~~~~~e~~rq~~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~ 111 (490)
T 2a7v_A 32 QESLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALE 111 (490)
T ss_dssp CCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHH
T ss_pred cchhhhcCHHHHHHHHHHHHHHHcCceEECCCCCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCC
Q 016668 160 AFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD 239 (385)
Q Consensus 160 lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD 239 (385)
+||+++++|+++|+++|||.||.+++.++++|||+|+++++.|+||++|+++.....+.+.|..++.++++++++++.+|
T Consensus 112 l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD 191 (490)
T 2a7v_A 112 AFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLID 191 (490)
T ss_dssp HTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCTTTCSBC
T ss_pred HcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcC
Confidence 99999877877899999999999999999999999999999999999998754333455677777778888887788999
Q ss_pred HHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccc
Q 016668 240 YDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP 319 (385)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gp 319 (385)
+++|++.+++++||+|+++.++||+.+|+++|++||+++|++|++|++|++|+++.|..+++++++|++++|+||+|+||
T Consensus 192 ~d~le~~l~~~~~klIi~~~s~~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp 271 (490)
T 2a7v_A 192 YNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGA 271 (490)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSC
T ss_pred HHHHHHHHhhcCCcEEEEcCCCCCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccc
Confidence 99999999766899999999999999999999999999999999999999999888877788889999999999999999
Q ss_pred cEEEEEEeCCCC---------chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 320 RGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 320 rgG~I~~~~~~~---------~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
+||+|+++++.+ .++++.+++++.+|+++||+|+++.++|+++|++++..++|++|++++++|.
T Consensus 272 ~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na 344 (490)
T 2a7v_A 272 RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNA 344 (490)
T ss_dssp SCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred cchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 999999998521 1135788999999999999999999999999999999999999999998874
No 3
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=100.00 E-value=3.3e-48 Score=397.64 Aligned_cols=308 Identities=64% Similarity=1.048 Sum_probs=272.3
Q ss_pred cchhhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 76 SSFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 76 ~~~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
+.+++++|+++||+++.++++|..+|+..|+|++++|++|+.|++++.+.+.++|.+|||++++|+|++.++++|+.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~a~e~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~ 97 (483)
T 1rv3_A 18 EQMLAQPLKDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQK 97 (483)
T ss_dssp HHHTTSCHHHHCHHHHHHHHHHHHHHHSSEECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHH
T ss_pred HHHHhhhhhhcCHHHHHHHHHHHHHhhcCeEEEcCCCCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHH
Confidence 45566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC
Q 016668 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST 235 (385)
Q Consensus 156 ~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~ 235 (385)
+++++||+++++|+++|+++||+.||.+++.++++|||+|++++++|++|++|++......+.+.|..++.+++++++++
T Consensus 98 ~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~ 177 (483)
T 1rv3_A 98 RALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDT 177 (483)
T ss_dssp HHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTT
T ss_pred HHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCC
Confidence 99999999976676789999999999999999999999999999999999988864333345566666788888777677
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCcc
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKS 315 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~ 315 (385)
+.+|+++|++.+++.+||+|+++.+++++..|+++|++||+++|++|++|++|+.|++..+..++|+.++|++++|+||+
T Consensus 178 ~~iD~d~le~~i~~~~tklIi~~~sn~~~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~ 257 (483)
T 1rv3_A 178 GYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKT 257 (483)
T ss_dssp CSBCHHHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGG
T ss_pred CcCCHHHHHHHHhhcCCcEEEEeCCcCCCcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCccc
Confidence 89999999999975689999887677778889999999999999999999999999988777777777899999999999
Q ss_pred CccccEEEEEEeCCCC---------chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhccc
Q 016668 316 LRGPRGGMIFFKKDPV---------LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACKP 383 (385)
Q Consensus 316 l~GprgG~I~~~~~~~---------~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~~ 383 (385)
|+||+||+|+++++.+ ..|++.++++...|++.+|+|+.+.++|+++|++++..++|++|++++.+|+
T Consensus 258 l~GprgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~ 334 (483)
T 1rv3_A 258 LRGCRAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANC 334 (483)
T ss_dssp GCCCSCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHH
Confidence 9999999999998521 0113667788888999999999999999999999998888999999988764
No 4
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.8e-40 Score=331.15 Aligned_cols=289 Identities=51% Similarity=0.802 Sum_probs=254.3
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
..+++..++|++++.+.+|..|+.+.++|++++|+++|.|++++.+.+.++|.+||++.+++.|++..+.+|++++++++
T Consensus 22 ~~~~l~~~~~~i~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la 101 (447)
T 3h7f_A 22 MSAPLAEVDPDIAELLAKELGRQRDTLEMIASENFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAK 101 (447)
T ss_dssp GGCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHhCCHHHHHHHHHHHHHHhCceeEecCCCCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999999988999999999999999999999988879999
Q ss_pred HHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCC
Q 016668 159 AAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLV 238 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~i 238 (385)
+++|++. ++++++||+.||..++.++++|||+|+++++.|++|+.++. .+...|..+..++++++++++.+
T Consensus 102 ~~~g~~~----~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~ 172 (447)
T 3h7f_A 102 ALFGAEF----ANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGM-----RLNFSGKLYENGFYGVDPATHLI 172 (447)
T ss_dssp HHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHSSEEEEECCCTTTCSC
T ss_pred HHcCCCc----eEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhh-----hhhhcCCeeEEEEcCcCcccCCc
Confidence 9999986 46668999999999999999999999999999888776654 22344555566677777667889
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCcc
Q 016668 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRG 318 (385)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~G 318 (385)
|++++++.++..+||+|+++.+++|...++++|+++|+++|++|++|++|+.|++..|..+++++++|++++|+||+|+|
T Consensus 173 d~~~l~~~i~~~~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G 252 (447)
T 3h7f_A 173 DMDAVRATALEFRPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGG 252 (447)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCC
T ss_pred CHHHHHHHHHhcCCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCC
Confidence 99999999976689999998888898889999999999999999999999999887776667777889999999999999
Q ss_pred ccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 319 PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 319 prgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
|+||++++++ ++.+.++...+++.++++....++|+++|+.++..++++++.+++.+|
T Consensus 253 ~~gG~i~~~~------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~ 310 (447)
T 3h7f_A 253 GRSGLIVGKQ------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSG 310 (447)
T ss_dssp CSCEEEEECG------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCeEEEEECH------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 9999999987 577888888888899999999999999999998877888888888765
No 5
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-37 Score=306.89 Aligned_cols=287 Identities=51% Similarity=0.831 Sum_probs=240.2
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~l 160 (385)
.+++.+||++++.+.+|..++...++|++++|++++.|++++...+.+.|.++|++.++|.|....+++++.++++++++
T Consensus 4 ~~~~~~~~~i~~~~~~e~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 83 (417)
T 3n0l_A 4 MSLEMFDKEIFDLTNKELERQCEGLEMIASENFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKL 83 (417)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHH
T ss_pred cchhhcCHHHHHHHHHHHHHHhcCeeeecccCCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHH
Confidence 46788999999999999888889999999999999999999999988888889999999999999999999999999999
Q ss_pred cCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCH
Q 016668 161 FNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDY 240 (385)
Q Consensus 161 fg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~ 240 (385)
+|++. .+|.+++|++|+..++.++++|||+|++.++.|+++..++. .+...|..+..++++++ +++.+|+
T Consensus 84 ~g~~~----~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~ 153 (417)
T 3n0l_A 84 FNCKF----ANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGA-----KVSSSGKMYESCFYGVE-LDGRIDY 153 (417)
T ss_dssp HTCSE----EECCCSSHHHHHHHHHHHHSCTTCEEEEECC---------------------CCSEEEEECCC-TTSSCCH
T ss_pred hCCCC----cceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhh-----hhhhhcceeeeEeccCC-CCCCcCH
Confidence 99976 35788999999999999999999999999998877765443 23344555566676676 5678999
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCcccc
Q 016668 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPR 320 (385)
Q Consensus 241 d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gpr 320 (385)
++|++.+++.++|+|+++.+++|...|+++|.++|+++|++||+|++|+.|+...+..+.++.++|++++|+||+|+||+
T Consensus 154 ~~l~~~i~~~~~~~v~~~~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~ 233 (417)
T 3n0l_A 154 EKVREIAKKEKPKLIVCGASAYARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPR 233 (417)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCS
T ss_pred HHHHHHHHhcCCeEEEECCcccCccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCC
Confidence 99999997558999999888889999999999999999999999999998888776666666678999999999999999
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
||+++++++ ++.+.+....+++.+++++...+++++.++.+....+++++.+++.++
T Consensus 234 ~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~ 290 (417)
T 3n0l_A 234 GGIIMTNDE-----ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTN 290 (417)
T ss_dssp CEEEEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred eeEEEECCH-----HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999854 788888887788888899999999999999887777778888777654
No 6
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=100.00 E-value=3.7e-35 Score=291.34 Aligned_cols=287 Identities=52% Similarity=0.829 Sum_probs=220.3
Q ss_pred cccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC
Q 016668 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (385)
Q Consensus 83 l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg 162 (385)
++.++|+++++++++..++.+.+.+++++|+++|.|.+++...+.+.+..||++.+++.+....+.+++.+++++++++|
T Consensus 11 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 90 (420)
T 3gbx_A 11 IADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG 90 (420)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT
T ss_pred hhhcCHHHHHHHHHHHHhhhcceeeeccCCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC
Confidence 78899999999999988888899999999999999999999988788888999988888887778889888899999999
Q ss_pred CCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHH
Q 016668 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (385)
Q Consensus 163 ~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~ 242 (385)
++. ..|.+++|++|+..++.++++|||+|++.++.|+++..++. .+...|..+..++++++ +++.+|+++
T Consensus 91 ~~~----~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~-~~~~~d~~~ 160 (420)
T 3gbx_A 91 ADY----ANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGS-----PVNFSGKLYNIVPYGID-ESGKIDYDE 160 (420)
T ss_dssp CSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC-----------------CHHHHSEEEEEEEC-TTCSCCHHH
T ss_pred CCC----ceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccch-----hhhhcccceeEEeccCC-ccCCcCHHH
Confidence 976 35778899999999999999999999999998877654443 22344554566666666 567899999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEE
Q 016668 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (385)
Q Consensus 243 le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG 322 (385)
|++.+++.++++|+++.+++|...|+++|+++|+++|++||+|++|+.|+...+..+.++...|++++|+||+|.||+||
T Consensus 161 l~~~i~~~~~~~v~~~~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gg 240 (420)
T 3gbx_A 161 MAKLAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGG 240 (420)
T ss_dssp HHHHHHHHCCSEEEECCTTCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSCE
T ss_pred HHHHHHhcCCeEEEEecCccCCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCce
Confidence 99999776799999988889988999999999999999999999998887766655555667899999999999999999
Q ss_pred EEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
+++++++. .++.+.++...+++.++++....+++++.++.+...++++++.+++.++
T Consensus 241 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~ 297 (420)
T 3gbx_A 241 LILAKGGD---EELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKN 297 (420)
T ss_dssp EEEESSCC---HHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred EEEEcCCc---HHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHH
Confidence 99998721 1577778887888888899999999999999887777777777666544
No 7
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=4.2e-35 Score=291.37 Aligned_cols=292 Identities=50% Similarity=0.802 Sum_probs=221.7
Q ss_pred chhhhhcccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016668 77 SFVDYSLGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (385)
Q Consensus 77 ~~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~ 156 (385)
.++..++..++|+++..+.++..++.+.++|++++|+.++.|++++...+.+.|..++++.+++.|....+.+++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 86 (425)
T 3ecd_A 7 PFFSQSLAERDASVRGAILKELERQQSQVELIASENIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIER 86 (425)
T ss_dssp HHHHCCHHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHH
T ss_pred hHHHHHHHhhCHHHHHHHHHHHHHHhcceeeecccCCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHH
Confidence 34677899999999999999888888889999999999999999999988888888999988888887667788888889
Q ss_pred HHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
+++++|++. +.|.++||+.|+..++.++++|||+|++.++.|+++..++. .....|..++.++++++++++
T Consensus 87 ~~~~~~~~~----~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~ 157 (425)
T 3ecd_A 87 VKRLFNAGH----ANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGA-----KPALSGKWFNALQYGVSRDTM 157 (425)
T ss_dssp HHHHHTCSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECC-----------------------CEEEEECCCTTTS
T ss_pred HHHHhCCCC----ceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecch-----hhhhcccceeeeecCCCcccC
Confidence 999999986 35668899999999999999999999999998876544432 222445555666776766667
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccC
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL 316 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l 316 (385)
.+|+++|++.+++.++++|+++.+++|...++++|.++|+++|++||+|++|+.|+...+..+.+++.+|++++|+||+|
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l 237 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYPRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTL 237 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCCSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGG
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCCCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCccc
Confidence 89999999999755899999988888999999999999999999999999998888766655555556899999999999
Q ss_pred ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 317 RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 317 ~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
+||+||+++++++ ++.+.+....+++.++++....+++++.++.+...++++++.+++.++
T Consensus 238 ~g~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~ 298 (425)
T 3ecd_A 238 RGPRGGFVLTNDE-----EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLAN 298 (425)
T ss_dssp CCCSCEEEEESCH-----HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCH-----HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999875 678888887888888889999999999999887776667776666543
No 8
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=100.00 E-value=1.7e-31 Score=263.94 Aligned_cols=282 Identities=51% Similarity=0.865 Sum_probs=221.3
Q ss_pred cccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC
Q 016668 83 LGEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (385)
Q Consensus 83 l~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg 162 (385)
+.++||+++..+.++..++.+.+.+.+++++.++.|++++...+.+++..||++.+++.|.+...++++.+++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g 83 (405)
T 2vi8_A 4 LPQQDPQVFAAIEQERKRQHAKIELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG 83 (405)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhCHHHHHHHHHHHHHhhcceeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC
Confidence 56789999999999888887777777899999999999999888667777888888888877778899888999999999
Q ss_pred CCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHH
Q 016668 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDM 242 (385)
Q Consensus 163 ~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~ 242 (385)
++. ..+.+++|+.|+..++.++++|||+|+++++.|+++..... .+...|..++.++++++++++.+|+++
T Consensus 84 ~~~----~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~ 154 (405)
T 2vi8_A 84 AEH----ANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGS-----PVNFSGVQYNFVAYGVDPETHVIDYDD 154 (405)
T ss_dssp CSE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTC-----TTSHHHHHSEEEEECBCTTTCSBCHHH
T ss_pred CCc----eEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhcccc-----hhhhccceeEEEecccccccCCcCHHH
Confidence 985 35667899999999999999999999999987765532111 112334433555666654567899999
Q ss_pred HHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEE
Q 016668 243 LEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGG 322 (385)
Q Consensus 243 le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG 322 (385)
+++.+++.++++|+++.++++...|+++|.++|+++|++|++|++|+.|....+..+..+++.|++++|+||+|.||.||
T Consensus 155 l~~~i~~~~~~~v~~~~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG 234 (405)
T 2vi8_A 155 VREKARLHRPKLIVAAAAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRGG 234 (405)
T ss_dssp HHHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSCE
T ss_pred HHHHHHhcCCeEEEEeCCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCCe
Confidence 99998755789998876778877799999999999999999999998665544433333446899999999999888899
Q ss_pred EEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
++++++ ++.+++.....++..++++...++++..+++.+....+++..+++
T Consensus 235 ~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~ 285 (405)
T 2vi8_A 235 MILCQE------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRV 285 (405)
T ss_dssp EEEECH------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred EEEEcH------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 999986 677777766556666778888898888888776554444444443
No 9
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=2.4e-31 Score=263.11 Aligned_cols=283 Identities=51% Similarity=0.824 Sum_probs=224.3
Q ss_pred ccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC
Q 016668 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL 163 (385)
Q Consensus 84 ~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~ 163 (385)
...||++++.+.++..++...+++..++|+.++.|++++...+.+.+..+||+.+++.|.+..+.+|+.+++++++++|+
T Consensus 5 ~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~ 84 (407)
T 2dkj_A 5 LKRDEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA 84 (407)
T ss_dssp -CCCHHHHHHHHHHHHHHHTSEECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhhcceeeccCCCCCCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC
Confidence 45689999999999888888899999999999999999998886656667888777778887778888888999999999
Q ss_pred CCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHH
Q 016668 164 DENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (385)
Q Consensus 164 ~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~l 243 (385)
+. .+|.+++|+.|+..++.++++|||+|+++++.|+++..... .+...|..+..++++++++++.+|++++
T Consensus 85 ~~----~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~l 155 (407)
T 2dkj_A 85 AW----ANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHGS-----RVNFSGKLYKVVSYGVRPDTELIDLEEV 155 (407)
T ss_dssp SE----EECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTC-----TTSHHHHHSEEEEECCCTTTSSCCHHHH
T ss_pred Cc----ceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchHH-----HHHhcCceEEEEecCCCcccCccCHHHH
Confidence 86 35778899999999999999999999999987766532111 2334455445666655544678999999
Q ss_pred HHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEEE
Q 016668 244 EKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGM 323 (385)
Q Consensus 244 e~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG~ 323 (385)
++.+++.++++|+++.+++|...|+++|.++|+++|+++|+|++|+.|+...+....+++..|++++|+||+|+|+++|+
T Consensus 156 ~~~l~~~~~~~v~~~~p~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~G~ 235 (407)
T 2dkj_A 156 RRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRGGL 235 (407)
T ss_dssp HHHHHHHCCSEEEECCSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSCEE
T ss_pred HHHHhhcCCeEEEEeccccCCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCceE
Confidence 99997557899999778889888999999999999999999999987776555443444468999999999999999999
Q ss_pred EEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHh
Q 016668 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSA 380 (385)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~ 380 (385)
++++++ ++.+.+.....++..++++...++++..+++......+++..+++.
T Consensus 236 ~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 287 (407)
T 2dkj_A 236 ILSNDP-----ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVV 287 (407)
T ss_dssp EEESCH-----HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred EEECCH-----HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 999843 6777777666566667788888878788887765544444444443
No 10
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=8.4e-24 Score=213.64 Aligned_cols=230 Identities=18% Similarity=0.157 Sum_probs=169.5
Q ss_pred cCChHHH---HHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhccC----CCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 85 EADPEVC---EIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 85 ~~dp~~~---~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~y----~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
.+++++. +.+++|..+|...++.|+++|. +.|++++.+...... .+||++.++ ..+++| +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~n~--~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-----g~~~Le----~~l 83 (427)
T 3hvy_A 15 NINERVLELYERALNDVEKEFKYYDEIREYNQ--LKVLKAFQEERISESHFTNSSGYGYNDI-----GRDSLD----RVY 83 (427)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCTTCH-----HHHHHH----HHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHhcccCcCCCCCch-----hHHHHH----HHH
Confidence 5688877 5567788888899999999998 899999987643222 345554332 245565 468
Q ss_pred HHHcCCCCCCCcceee--cCCcHHHHHHHHHHhccCCCEEeecC-CCCCcccc--CCccccc-cccccCcceEEEEeccc
Q 016668 158 LAAFNLDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLS--HGFMTPK-RRVSGTSIYFESMPYRL 231 (385)
Q Consensus 158 a~lfg~~~~~~~~~V~--~~sGs~A~~~a~~all~pGD~Vl~~~-~~~ggh~s--~~~~~~~-~~~~~~g~~~~~i~~~~ 231 (385)
++++|.+. +.++ ++||+.||..++.++++|||+|++.+ +.|+++.. ++....+ ..+...|..+. .++.
T Consensus 84 A~l~g~e~----alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~--~v~~ 157 (427)
T 3hvy_A 84 ANIFNTES----AFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYK--MVDL 157 (427)
T ss_dssp HHHHTCSE----EEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEE--ECCC
T ss_pred HHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEE--EecC
Confidence 99999987 3444 68999999999999999999999998 77765431 0000000 12234565444 4334
Q ss_pred cCCCCCCCHHHHHHHhhh-cCCcEEEEcC----CCCC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCC
Q 016668 232 DESTGLVDYDMLEKTAIL-FRPKLIIAGA----SAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPF 302 (385)
Q Consensus 232 ~~~~~~iD~d~le~~i~~-~~pklIi~~~----s~~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~ 302 (385)
+++.+|++++++.+++ .++|+|+++. ++++ ...|+++|+++|++ +|+++++|++|..+.. ...|+
T Consensus 158 --~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~----~~~p~ 231 (427)
T 3hvy_A 158 --KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVE----EKEPT 231 (427)
T ss_dssp --BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTS----SSCGG
T ss_pred --CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcccccc----CCCCc
Confidence 3678999999999973 4799999987 5655 45689999999999 8999999999966542 13455
Q ss_pred C-CCcEEEECCCccCcc---ccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 303 K-YCDVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 303 ~-gaDiv~~S~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+ ++|++++|+||+|.| ++||+|++++ ++.+++...
T Consensus 232 ~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~------~li~~l~~~ 270 (427)
T 3hvy_A 232 DVGADIIAGSLIKNIGGGIATTGGYIAGKE------EYVTQATFR 270 (427)
T ss_dssp GGTCSEEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHH
T ss_pred ccCCeEEEECCcccccccccceEEEEEECH------HHHHHHHHH
Confidence 5 799999999999977 8899999987 687877663
No 11
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.89 E-value=1.5e-22 Score=204.45 Aligned_cols=230 Identities=17% Similarity=0.140 Sum_probs=165.7
Q ss_pred CChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhh--ccC--CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc
Q 016668 86 ADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLT--NKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAF 161 (385)
Q Consensus 86 ~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~--~~y--~~g~p~~r~~~G~~~~~~le~~~~~~la~lf 161 (385)
-..++++.++++..++...++.++++|. +.|++++..... ..+ ++||.+ +....+++|+ ++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~a~~n~--~~Vl~A~~~~~~~~~~~~~~~gy~y-----~~~~~~~Le~----~lA~l~ 86 (427)
T 3i16_A 18 RVLKLYETAMNDIQNQFKILDDIREFNQ--LKVLNAFQEERISEAHFTNSSGYGY-----GDIGRDSLDA----VYARVF 86 (427)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCTTCT-----TCHHHHHHHH----HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCH--HHHHHHHHHhchhHHhcCCCCCCCC-----CHHHHHHHHH----HHHHHh
Confidence 3446677778888888888999999998 789999875321 111 233433 3333556664 689999
Q ss_pred CCCCCCCcceee--cCCcHHHHHHHHHHhccCCCEEeecC-CCCCccccC-Ccccc--ccccccCcceEEEEeccccCCC
Q 016668 162 NLDENKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSH-GFMTP--KRRVSGTSIYFESMPYRLDEST 235 (385)
Q Consensus 162 g~~~~~~~~~V~--~~sGs~A~~~a~~all~pGD~Vl~~~-~~~ggh~s~-~~~~~--~~~~~~~g~~~~~i~~~~~~~~ 235 (385)
|++. +.++ ++||+.||..++.++++|||+|++.+ +.|+++... +.-.. ...+...|..+ ..++++ ++
T Consensus 87 g~e~----alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~--~~v~~~-~~ 159 (427)
T 3i16_A 87 NTES----ALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINY--KQVDLK-ED 159 (427)
T ss_dssp TCSE----EEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEE--EECCCC-TT
T ss_pred CCcc----eEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEE--EEecCc-cC
Confidence 9987 3444 78999999999999999999999998 777665310 00000 01123346544 444454 35
Q ss_pred CCCCHHHHHHHhhh-cCCcEEEEcC----CCCC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCCC-CC
Q 016668 236 GLVDYDMLEKTAIL-FRPKLIIAGA----SAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YC 305 (385)
Q Consensus 236 ~~iD~d~le~~i~~-~~pklIi~~~----s~~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~-ga 305 (385)
+.+|++++++.+++ .++|+|+++. ++++ ...|+++|+++|++ +|+++++|++|..+.. ...|++ ++
T Consensus 160 g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~----~~~p~~~ga 235 (427)
T 3i16_A 160 GKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMD----TKEPTDVGA 235 (427)
T ss_dssp SSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSS----SSCGGGGTC
T ss_pred CCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccc----cCCccccCC
Confidence 78999999999973 4789999887 5555 45689999999999 9999999999865532 124555 89
Q ss_pred cEEEECCCccCcc---ccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 306 DVVTTTTHKSLRG---PRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 306 Div~~S~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
|++++|+||++.| ++||+|++++ ++.+++...
T Consensus 236 Div~~S~sK~lgg~g~~~gG~i~~~~------~li~~l~~~ 270 (427)
T 3i16_A 236 DLIAGSLIKNIGGGIAPTGGYLAGTK------DCIEKTSYR 270 (427)
T ss_dssp SEEEEETTSGGGTTTCCSCEEEEECH------HHHHHHHHH
T ss_pred eEEEecCcccCCCCCCceEEEEEECH------HHHHHHHHh
Confidence 9999999999977 8899999987 677777653
No 12
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.86 E-value=6.3e-21 Score=191.61 Aligned_cols=228 Identities=18% Similarity=0.168 Sum_probs=159.9
Q ss_pred hHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhc--cCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCC
Q 016668 88 PEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTN--KYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDE 165 (385)
Q Consensus 88 p~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~--~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~ 165 (385)
.++++.++++.+++...++.++..|. ..|++++...... .+. +..+ |.-+....+++|+ .+++++|.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~a~~~~~~~~~~~~-~~~~--~~y~~~~~~~Le~----~lA~l~g~e~ 76 (409)
T 3jzl_A 6 QAIRKKVETQIDDLQNKTDEIAEFNQ--AKVLDAFQENKVSDFHFH-PSTG--YGYDDEGRDTLER----VYATVFKTEA 76 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGGC-CCCT--TCTTCHHHHHHHH----HHHHHHTCSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhH--HHHHHHHHHhhhhhhccC-CCcC--CCCChhHHHHHHH----HHHHHhCCCc
Confidence 35677778888888888888888886 7888888765321 111 1111 1113333455554 6889999986
Q ss_pred CCCcceee--cCCcHHHHHHHHHHhccCCCEEeecC-CCCCccccCCcc-c-cccccccCcceEEEEeccccCCCCCCCH
Q 016668 166 NKWGVNVQ--PLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFM-T-PKRRVSGTSIYFESMPYRLDESTGLVDY 240 (385)
Q Consensus 166 ~~~~~~V~--~~sGs~A~~~a~~all~pGD~Vl~~~-~~~ggh~s~~~~-~-~~~~~~~~g~~~~~i~~~~~~~~~~iD~ 240 (385)
+.++ ++||+.||..++.++++|||+|++.+ +.|++.....-. . ....+...|..+ ..++++ +++.+|+
T Consensus 77 ----alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~--~~v~~~-~~g~~d~ 149 (409)
T 3jzl_A 77 ----ALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGY--SSVPLL-ENGDVDF 149 (409)
T ss_dssp ----EEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEE--EECCCC-TTSCCCH
T ss_pred ----EEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEE--EEeCCC-CCCCcCH
Confidence 3454 78999999999999999999999998 766554210000 0 000223446544 444455 3578999
Q ss_pred HHHHHHhhhcCCcEEEEcC----CCCC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCCC-CCcEEEEC
Q 016668 241 DMLEKTAILFRPKLIIAGA----SAYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT 311 (385)
Q Consensus 241 d~le~~i~~~~pklIi~~~----s~~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S 311 (385)
+++++.+++ ++|+|+++. ++++ ...|+++|+++|++ +|+++++|++|..+.. ...+.+ ++|++++|
T Consensus 150 e~l~~ai~~-~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~----~~~p~~~g~Div~~S 224 (409)
T 3jzl_A 150 PRIAKKMTP-KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVE----YQEPPEVGADIIAGS 224 (409)
T ss_dssp HHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTS----SCCSGGGTCSEEEEE
T ss_pred HHHHHhccC-CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccc----cCCccccCCeEEEEC
Confidence 999999965 789999887 5554 45689999999999 9999999999865532 123455 89999999
Q ss_pred CCccCcc---ccEEEEEEeCCCCchhHHHHHHhh
Q 016668 312 THKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 312 ~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+||++.| +.||+|++++ ++.+++..
T Consensus 225 ~sK~lgg~~~~~GG~v~~~~------~li~~l~~ 252 (409)
T 3jzl_A 225 LIKNPGGGLAKTGGYIAGKE------ALVDLCGY 252 (409)
T ss_dssp TTSGGGTTTCSSCEEEEECH------HHHHHHHH
T ss_pred ccccCCccCCceEEEEEeCH------HHHHHHHH
Confidence 9999976 5689999987 67777755
No 13
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.86 E-value=1.9e-21 Score=189.78 Aligned_cols=241 Identities=15% Similarity=0.077 Sum_probs=163.0
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+.+.++...+++.|++++...+...+ + ....++.+.+++++++++|++.. +...+.+.+|++|+. +
T Consensus 4 ~~~~~gp~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~la~~~~~~~~-~~~v~~~~g~t~al~-~ 69 (384)
T 3zrp_A 4 LLLHVGPTTIKEDVLVAGLENNVGFT-----------S-KEFVEALAYSLKGLRYVMGASKN-YQPLIIPGGGTSAME-S 69 (384)
T ss_dssp --CCSSCSCCCHHHHHHTTCCSCCTT-----------S-HHHHHHHHHHHHHHHHHHTCCTT-SEEEEEESCHHHHHH-H
T ss_pred eeccCCCCCCCHHHHHHhhccccccc-----------c-HHHHHHHHHHHHHHHHHhCCCCC-CcEEEEcCCcHHHHH-H
Confidence 45678888999999999876543211 1 12234555578899999999862 112355566778999 9
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+.++++|||+|++.++.|.+. .+. ..+...|..+..++ ++. ++.+|++++++.+++.++++|++..+++
T Consensus 70 ~~~~~~~gd~vi~~~~~~~~~---~~~---~~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 140 (384)
T 3zrp_A 70 VTSLLKPNDKILVVSNGVFGD---RWE---QIFKRYPVNVKVLR--PSP-GDYVKPGEVEEEVRKSEYKLVALTHVETST 140 (384)
T ss_dssp GGGGCCTTCEEEEECSSHHHH---HHH---HHHTTSSCEEEEEC--CST-TCCCCHHHHHHHHHHSCEEEEEEESEETTT
T ss_pred HHhhcCCCCEEEEecCCcchH---HHH---HHHHHcCCcEEEec--CCC-CCCCCHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 999999999999988754221 110 12245566555444 543 5689999999999776789998876654
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCcccc-EEEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gpr-gG~I~~~~~~~~~~~~~~~ 339 (385)
|...|+++|.++|+++|+++|+|++|..|.. +..+. ++|++++|+||+|.|+. .|++++++ ++.++
T Consensus 141 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~~ 209 (384)
T 3zrp_A 141 GVREPVKDVINKIRKYVELIVVDGVSSVGAE-----EVKAEEWNVDVYLTASQKALGSAAGLGLLLLSP------KALSI 209 (384)
T ss_dssp TEECCHHHHHHHHGGGEEEEEEECTTTTTTS-----CCCTTTTTCSEEEEETTSTTCCCSSEEEEEECH------HHHHH
T ss_pred ceECcHHHHHHHHHhcCCEEEEECcccccCc-----cccccccCCCEEEecCcccccCCCceEEEEECH------HHHHH
Confidence 4678999999999999999999999976532 22233 68999999999997655 58888877 45444
Q ss_pred H-------------hhcc---------CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 340 I-------------NNAV---------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 340 i-------------~~~~---------fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
+ .... .....|+++...++++..+++.+...++++..+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 271 (384)
T 3zrp_A 210 LDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRH 271 (384)
T ss_dssp HHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 4 1000 11112467888888888888765544344444333
No 14
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.86 E-value=6.9e-21 Score=187.95 Aligned_cols=240 Identities=15% Similarity=0.128 Sum_probs=166.4
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+.+.+....+++.|++++...+...+ +.. ..++.+.+++++++++|.+..+ ..+.+.||+.|+..+
T Consensus 15 ~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~~~-~~~~~~~~~~~la~~~~~~~~~--~v~~~~sgt~al~~~ 80 (411)
T 3nnk_A 15 LLMGPGPINADPRVLRAMSSQLIGQY-----------DPA-MTHYMNEVMALYRGVFRTENRW--TMLVDGTSRAGIEAI 80 (411)
T ss_dssp EEESSSCCCCCHHHHHHHTSCCCCTT-----------CHH-HHHHHHHHHHHHHHHHTCCCSE--EEEEESCHHHHHHHH
T ss_pred eeecCCCCCCCHHHHHHhhccccccc-----------cHH-HHHHHHHHHHHHHHHhCCCCCc--EEEECCCcHHHHHHH
Confidence 55667888889999999875432111 112 2244555778999999998642 134455778899999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+.++++|||+|++.++.|.+.. +. ..+...|..+..++ ++ +++.+|+++|++.+++.++++|+++.+++
T Consensus 81 ~~~~~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 151 (411)
T 3nnk_A 81 LVSAIRPGDKVLVPVFGRFGHL---LC---EIARRCRAEVHTIE--VP-WGEVFTPDQVEDAVKRIRPRLLLTVQGDTST 151 (411)
T ss_dssp HHHHCCTTCEEEEEECSHHHHH---HH---HHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHHhcCCCCEEEEecCCchHHH---HH---HHHHHcCCeEEEEe--cC-CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCc
Confidence 9999999999999987553311 10 13345676555555 44 45788999999999765899998876554
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
|...|+++|.++|+++|+++++|++|..|.. +..+. ++|++++|+||+|.||.| |++++++ ++.++
T Consensus 152 G~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~ 220 (411)
T 3nnk_A 152 TMLQPLAELGEICRRYDALFYTDATASLGGN-----PLETDVWGLDAVSAGMQKCLGGPSGTSPITLSA------RMEEA 220 (411)
T ss_dssp TEECCCTTHHHHHHHHTCEEEEECTTTBTTB-----CCCTTTTTCSEEECCSTTTTCCCSSEEEEEECH------HHHHH
T ss_pred ceeccHHHHHHHHHHcCCEEEEECCcccCCc-----ccchhccCCcEEEecCccccCCCCceEEEEECH------HHHHH
Confidence 4577899999999999999999999876532 22232 689999999999877755 8888877 56666
Q ss_pred Hhhcc-----------------------------------CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 340 INNAV-----------------------------------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 340 i~~~~-----------------------------------fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
+.... .....++++...++++..+++......+++..++
T Consensus 221 ~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 294 (411)
T 3nnk_A 221 IRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIAR 294 (411)
T ss_dssp HHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 65432 0112246778888888888876654333333333
No 15
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.86 E-value=1.1e-20 Score=186.75 Aligned_cols=240 Identities=10% Similarity=0.083 Sum_probs=165.0
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+.+.++...+++.+++++...... ++ . ....++.+.+++++++++|++.+ + +.+.+.||+.|+..+
T Consensus 13 ~~~~p~p~~~~~~v~~a~~~~~~~----------~~-~-~~~~~~~~~l~~~la~~~g~~~~-~-~~~~~~s~t~al~~~ 78 (416)
T 3isl_A 13 TIMTPGPVEVDPRVLRVMSTPVVG----------QF-D-PAFTGIMNETMEMLRELFQTKNR-W-AYPIDGTSRAGIEAV 78 (416)
T ss_dssp EECSSSSCCCCHHHHHHTTSCCCC----------TT-S-HHHHHHHHHHHHHHHHHTTCCCS-E-EEEEESCHHHHHHHH
T ss_pred eeecCCCcCcCHHHHHHhcccCCC----------Cc-c-HHHHHHHHHHHHHHHHHhCCCCC-c-EEEecCcHHHHHHHH
Confidence 456677788899999987642111 01 1 22235555678899999999874 1 223566788999999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+.++++|||+|++.++.|.++. +. ..+...|..+..++ ++ .++.+|++++++.+++.++++|+++.+++
T Consensus 79 ~~~l~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 149 (416)
T 3isl_A 79 LASVIEPEDDVLIPIYGRFGYL---LT---EIAERYGANVHMLE--CE-WGTVFDPEDIIREIKKVKPKIVAMVHGETST 149 (416)
T ss_dssp HHHHCCTTCEEEEEESSHHHHH---HH---HHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHHhcCCCCEEEEecCCcccHH---HH---HHHHhcCCeeEEEe--cC-CCCCCCHHHHHHHHhhCCCcEEEEEccCCCC
Confidence 9999999999999987543311 10 12345676555555 44 35689999999999755799998876655
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
|...|+++|.++|+++|+++++|++|+.|.. +..++ ++|++++|+||++.||.| |+++.++ ++.++
T Consensus 150 G~~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~------~~~~~ 218 (416)
T 3isl_A 150 GRIHPLKAIGEACRTEDALFIVDAVATIGGC-----EVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNE------RVADV 218 (416)
T ss_dssp TEECCCHHHHHHHHHTTCEEEEECTTTTTTS-----CCCTTTTTCSEEECCSSSTTCCCSSEEEEEECH------HHHHH
T ss_pred ceecCHHHHHHHHHHcCCEEEEECCccccCC-----CcchhhcCCCEEEecCccccCCCCCeEEEEECH------HHHHH
Confidence 4577899999999999999999999976533 22232 689999999999877765 8888877 56555
Q ss_pred Hhhc-------------------------------------cCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 340 INNA-------------------------------------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 340 i~~~-------------------------------------~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
+... ......++++...++++..+++.....++++..++
T Consensus 219 ~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~ 294 (416)
T 3isl_A 219 IAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFER 294 (416)
T ss_dssp HHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred hhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 5421 11112456777888888888876544323444333
No 16
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.86 E-value=6e-21 Score=187.67 Aligned_cols=223 Identities=20% Similarity=0.197 Sum_probs=157.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD 193 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD 193 (385)
.++.+.+++...+.. +..++++.++..|.. .....+++++++++|.+. .+.+++|++|+..++.++++|||
T Consensus 58 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~~~~~-----~i~~~sGt~a~~~~l~~~~~~gd 128 (399)
T 3tqx_A 58 DHPALIKTAQTVVEQ-YGFGMASVRFICGTQ---TIHKELEKDISEFLGTDD-----TILYSSCFDANGGLFETLLGPED 128 (399)
T ss_dssp TCHHHHHHHHHHHHH-HCSCCCSCCCCCCCB---HHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHTTHHHHCCTTC
T ss_pred CCHHHHHHHHHHHHH-hCCCCCCcCccccCc---hHHHHHHHHHHHHHCCCc-----EEEECchHHHHHHHHHHhcCCCC
Confidence 369999999877754 545556556555543 222334567889999874 57788999999999999999999
Q ss_pred EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCCC--CCC
Q 016668 194 RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAYP--RDF 266 (385)
Q Consensus 194 ~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~~--~~~ 266 (385)
+|++.++.|+++.. .+...|..+..++ . +|++++++.+++. ++++|+++++++| ...
T Consensus 129 ~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~ 192 (399)
T 3tqx_A 129 AIISDELNHASIID--------GIRLCKAQRYRYK--N------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIA 192 (399)
T ss_dssp EEEEETTCCHHHHH--------HHHSCCSEEEEEC--T------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEEC
T ss_pred EEEECCcccHHHHH--------HHHHcCCceeEeC--C------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcC
Confidence 99999987765422 3445666444333 2 5778888888653 6889998876554 567
Q ss_pred CHHHHHHHHHHcCcEEEEeccccccccccCcc--cC--C-CCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVV--AD--P-FKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 267 dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~--p-~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
++++|.++|+++|+++|+|++|..|+...... .. . ..+.|++++|+||++.|++||++++++ ++.+.+.
T Consensus 193 ~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~gG~~~~~~------~~~~~~~ 266 (399)
T 3tqx_A 193 DLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASGGYTSGHK------EIIEWLR 266 (399)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCCEEEEECH------HHHHHHH
T ss_pred CHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCceEEEEcCH------HHHHHHH
Confidence 89999999999999999999997665321100 00 1 125689999999999889999999987 5666665
Q ss_pred hccCCC-ccCCChHHHHHHHHHHHHHh
Q 016668 342 NAVFPG-LQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 342 ~~~fp~-~qg~p~~~~iaala~Al~e~ 367 (385)
....+. ..++++...+++...+++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ 293 (399)
T 3tqx_A 267 NRSRPYLFSNTVAPVIVATSLKVLELL 293 (399)
T ss_dssp HHCHHHHSSCCCCHHHHHHHHHHHHHH
T ss_pred HhCcceeccCCCcHHHHHHHHHHHHHH
Confidence 432111 23456666777777777655
No 17
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.86 E-value=2.4e-20 Score=182.34 Aligned_cols=226 Identities=12% Similarity=0.059 Sum_probs=158.0
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcHHHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTA 187 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs~A~~~a~~a 187 (385)
++...+++.|.+++...+.+. | + ....++.+.+++++++++|++ .+ ..+.+.+|+.|+..++.+
T Consensus 26 ~~~~~~~~~v~~a~~~~~~~~----------~-~-~~~~~~~~~~~~~la~~~g~~~~~---~v~~~~g~t~a~~~~~~~ 90 (386)
T 2dr1_A 26 AGPVACFPEVLEIMKVQMFSH----------R-S-KEYRKVHMDTVERLREFLEVEKGE---VLLVPSSGTGIMEASIRN 90 (386)
T ss_dssp SSSCCCCHHHHHHTTSCCCCT----------T-S-HHHHHHHHHHHHHHHHHHTCSSSE---EEEESSCHHHHHHHHHHH
T ss_pred CCCcCCcHHHHHHHhcccccc----------c-C-HHHHHHHHHHHHHHHHHhCCCCCc---EEEEeCChHHHHHHHHHH
Confidence 666778999999987654321 1 1 112456667788999999997 32 234556778899999999
Q ss_pred hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh-cCCcEEEEcCCCC--CC
Q 016668 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAY--PR 264 (385)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~-~~pklIi~~~s~~--~~ 264 (385)
+++|||+|++.++.|.++. +. ..+...|..+..++ +++ ++.+|+++|++.+++ .++++|++..+++ |.
T Consensus 91 l~~~gd~vl~~~~~~~~~~-~~-----~~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~ 161 (386)
T 2dr1_A 91 GVSKGGKVLVTIIGAFGKR-YK-----EVVESNGRKAVVLE--YEP-GKAVKPEDLDDALRKNPDVEAVTITYNETSTGV 161 (386)
T ss_dssp HSCTTCEEEEEESSHHHHH-HH-----HHHHHTTCEEEEEE--CCT-TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTE
T ss_pred hhcCCCeEEEEcCCchhHH-HH-----HHHHHhCCceEEEe--cCC-CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcch
Confidence 9999999999988654420 11 12345666544444 543 567999999999853 3789988876554 45
Q ss_pred CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCcccc-EEEEEEeCCCCchhHHHHHHh
Q 016668 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gpr-gG~I~~~~~~~~~~~~~~~i~ 341 (385)
..|+++|.++|+++|++|++|++|+.|.. +.++. +.|++++|+||+|.+|. .|++++++ ++.+++.
T Consensus 162 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~~~~~g~G~~~~~~------~~~~~~~ 230 (386)
T 2dr1_A 162 LNPLPELAKVAKEHDKLVFVDAVSAMGGA-----DIKFDKWGLDVVFSSSQKAFGVPPGLAIGAFSE------RFLEIAE 230 (386)
T ss_dssp ECCHHHHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCSEEEEETTSTTCCCSSCEEEEECH------HHHHHHT
T ss_pred hCCHHHHHHHHHHcCCeEEEEccccccCc-----cccccccCCcEEEEeccccccCCCceEEEEECH------HHHHHHh
Confidence 78999999999999999999999976532 12233 67999999999998774 49999987 4555542
Q ss_pred h----------------cc-CCCccCCChHHHHHHHHHHHHHhhC
Q 016668 342 N----------------AV-FPGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 342 ~----------------~~-fp~~qg~p~~~~iaala~Al~e~~~ 369 (385)
. .. .....++++...++++..+++....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 275 (386)
T 2dr1_A 231 KMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEK 275 (386)
T ss_dssp TCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 1 00 0122345677777788888876543
No 18
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.85 E-value=1.2e-20 Score=185.41 Aligned_cols=240 Identities=12% Similarity=0.063 Sum_probs=164.8
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+.+.+++..+++.|++++...+...| ....+.....+++++++++|++.++ ..+.+.+|+.|+..+
T Consensus 21 ~~~~~g~~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~g~~~~~--~i~~~~g~t~a~~~~ 86 (393)
T 2huf_A 21 LLMGPGPSNAPQRVLDAMSRPILGHL------------HPETLKIMDDIKEGVRYLFQTNNIA--TFCLSASGHGGMEAT 86 (393)
T ss_dssp EECSSSCCCCCHHHHHHTTSCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSE--EEEESSCHHHHHHHH
T ss_pred EEecCCCCCCCHHHHHHHHhhhccCC------------CHHHHHHHHHHHHHHHHHhCCCCCc--EEEEcCcHHHHHHHH
Confidence 45556777789999999876543211 1222344455778899999997631 124556778899999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+.++++|||+|+++++.|.++ .+. ..+...|..+..++ +++ ++.+|++++++.+++.++++|+++.+++
T Consensus 87 ~~~~~~~gd~vl~~~~~~~~~---~~~---~~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~i~~~~~~~v~~~~~~npt 157 (393)
T 2huf_A 87 LCNLLEDGDVILIGHTGHWGD---RSA---DMATRYGADVRVVK--SKV-GQSLSLDEIRDALLIHKPSVLFLTQGDSST 157 (393)
T ss_dssp HHHHCCTTCEEEEEESSHHHH---HHH---HHHHHTTCEEEEEE--CCT-TCCCCHHHHHHHHHHHCCSEEEEESEETTT
T ss_pred HHHHhCCCCEEEEECCCcchH---HHH---HHHHHcCCeeEEEe--CCC-CCCCCHHHHHHHHhccCCcEEEEEccCCCc
Confidence 999999999999998865432 110 11233566555554 443 4689999999998654789998876654
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
|...|+++|.++|+++|+++++|++|..|.. +..+. +.|++++|+||+|.||.| |++++++ ++.++
T Consensus 158 G~~~~l~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~------~~~~~ 226 (393)
T 2huf_A 158 GVLQGLEGVGALCHQHNCLLIVDTVASLGGA-----PMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSH------RAVER 226 (393)
T ss_dssp TEECCCTTHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCSEEECCSSSTTCCCSSCEEEEECH------HHHHH
T ss_pred cccCCHHHHHHHHHHcCCEEEEEcccccCCC-----CcchhhcCccEEEECCCcccccCCCeEEEEECH------HHHHH
Confidence 4567899999999999999999999875532 21232 689999999999887766 8888876 67776
Q ss_pred Hhhc---cCC-------------------CccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 340 INNA---VFP-------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 340 i~~~---~fp-------------------~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
+... ..+ ...++++...++++..+++.+...++++..++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 287 (393)
T 2huf_A 227 YKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIAR 287 (393)
T ss_dssp HHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 6543 111 11246777888888878876543334333333
No 19
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.85 E-value=4.7e-20 Score=180.97 Aligned_cols=232 Identities=14% Similarity=0.127 Sum_probs=157.7
Q ss_pred ccccccCCC---CCcHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH
Q 016668 104 SLELIASEN---FTSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (385)
Q Consensus 104 ~l~Liasen---~~s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~ 179 (385)
-+++..+++ .+++.+++++...+.+ +..+++..+|..| .+...+ .++.+++++|++. .+.+++|++
T Consensus 41 ~id~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~-----~i~~~sGt~ 110 (384)
T 1bs0_A 41 YLNFSSNDYLGLSHHPQIIRAWQQGAEQ-FGIGSGGSGHVSGYSVVHQA----LEEELAEWLGYSR-----ALLFISGFA 110 (384)
T ss_dssp EEECSCCCTTSGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCCHHHHH----HHHHHHHHHTCSE-----EEEESCHHH
T ss_pred EEEeeccCccCCCCCHHHHHHHHHHHHH-hCCCCCCcCcccCChHHHHH----HHHHHHHHhCCCc-----EEEeCCcHH
Confidence 356655554 4689999999887754 2233444444323 233333 4557888899863 577899999
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEE
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIA 257 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~ 257 (385)
|+..++.++++|||.|++.++.|+++.. .+...|..+..++ .+|++++++.+++. ++++|++
T Consensus 111 a~~~~~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--------~~d~~~l~~~l~~~~~~~~~v~~ 174 (384)
T 1bs0_A 111 ANQAVIAAMMAKEDRIAADRLSHASLLE--------AASLSPSQLRRFA--------HNDVTHLARLLASPCPGQQMVVT 174 (384)
T ss_dssp HHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHHTSSSEEEEEC--------TTCHHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHHhCCCCcEEEEcccccHHHHH--------HHHHcCCCEEEeC--------CCCHHHHHHHHHhcCCCCeEEEE
Confidence 9999999999999999999887654321 3345666544333 25899999988653 2678888
Q ss_pred cCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccc-cCc-ccCCCC-CCcEEEECCCccCccccEEEEEEeCCCCc
Q 016668 258 GASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVL 332 (385)
Q Consensus 258 ~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~-~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~ 332 (385)
+.+++ |...|+++|.++|+++|+++|+|++|..|... .+. .+..++ +.|++++|+||++. |.||++++++
T Consensus 175 ~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~---- 249 (384)
T 1bs0_A 175 EGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG-VSGAAVLCSS---- 249 (384)
T ss_dssp ESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS-SCCEEEEECH----
T ss_pred eCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh-ccCcEEEeCH----
Confidence 76665 46789999999999999999999999766532 111 111222 57899999999984 8889999976
Q ss_pred hhHHHHHHhhccCCCc-cCCChHHHHHHHHHHHHHhh
Q 016668 333 GVELESAINNAVFPGL-QGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~-qg~p~~~~iaala~Al~e~~ 368 (385)
++.+.+.....+.. ..+++....++...+++.+.
T Consensus 250 --~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 284 (384)
T 1bs0_A 250 --TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIR 284 (384)
T ss_dssp --HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHh
Confidence 56666654321111 12456666666666776654
No 20
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.85 E-value=8.4e-20 Score=178.32 Aligned_cols=200 Identities=17% Similarity=0.077 Sum_probs=142.4
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
.....+++.+.+++...+...+. ++. +.+...++++.+++++++++|++.+ ..+.+.+|++|+..++.++
T Consensus 37 ~~~~~~~~~v~~a~~~~~~~~~~--~~~-----~~~~~~~~~~~l~~~la~~~~~~~~---~i~~~~ggt~a~~~~~~~~ 106 (397)
T 3f9t_A 37 SMCSNVLPITRKIVDIFLETNLG--DPG-----LFKGTKLLEEKAVALLGSLLNNKDA---YGHIVSGGTEANLMALRCI 106 (397)
T ss_dssp CSCCCCCTHHHHHHHHHTTCCTT--SGG-----GBHHHHHHHHHHHHHHHHHTTCTTC---EEEEESCHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHHhhcCC--Ccc-----cChhHHHHHHHHHHHHHHHhCCCCC---CEEEecCcHHHHHHHHHHH
Confidence 44555789999999877654332 221 1223457777788999999999874 1355667788999999998
Q ss_pred ccC-------------CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEE
Q 016668 189 LKP-------------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (385)
Q Consensus 189 l~p-------------GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklI 255 (385)
.++ ||+|++.++.|.++.. .+...|..+..++ ++ +++.+|++++++.+++.++++|
T Consensus 107 ~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v 175 (397)
T 3f9t_A 107 KNIWREKRRKGLSKNEHPKIIVPITAHFSFEK--------GREMMDLEYIYAP--IK-EDYTIDEKFVKDAVEDYDVDGI 175 (397)
T ss_dssp HHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH--------HHHHHTCEEEEEC--BC-TTSSBCHHHHHHHHHHSCCCEE
T ss_pred HHHHHhhhhhcccCCCCeEEEECCcchhHHHH--------HHHHcCceeEEEe--eC-CCCcCCHHHHHHHHhhcCCeEE
Confidence 776 9999999987655321 3345576555444 55 3578999999999976468888
Q ss_pred EEcCCCC--CCCCCHHHHHHHHHHcCcEEEEecccccccccc-Cc---c---cCCCC---CCcEEEECCCccCccc-cEE
Q 016668 256 IAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SV---V---ADPFK---YCDVVTTTTHKSLRGP-RGG 322 (385)
Q Consensus 256 i~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~---~---~~p~~---gaDiv~~S~hK~l~Gp-rgG 322 (385)
++..+++ |...|+++|.++|+++|++|++|++|..+.... +. . ..+++ ++|++++|+||++.+| +.|
T Consensus 176 ~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g 255 (397)
T 3f9t_A 176 IGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSG 255 (397)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCE
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCce
Confidence 7766655 467899999999999999999999996543311 10 0 01222 6789999999998544 678
Q ss_pred EEEEeCC
Q 016668 323 MIFFKKD 329 (385)
Q Consensus 323 ~I~~~~~ 329 (385)
+++++++
T Consensus 256 ~~~~~~~ 262 (397)
T 3f9t_A 256 GILFKDI 262 (397)
T ss_dssp EEEESSG
T ss_pred EEEEeCH
Confidence 8888765
No 21
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.85 E-value=2.4e-20 Score=184.18 Aligned_cols=233 Identities=14% Similarity=0.078 Sum_probs=158.3
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-- 188 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-- 188 (385)
...+++.|++++...+.+.+ +++...|..|.. .....+.+++++++++|++.+ ..+.+++|+.++..++.++
T Consensus 35 ~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~al~~~~~~l~~ 108 (406)
T 3cai_A 35 GMLIPDSVATTVSTAFRRSG--ASTVGAHPSARR-SAAVLDAAREAVADLVNADPG---GVVLGADRAVLLSLLAEASSS 108 (406)
T ss_dssp CCCCCHHHHHHHHHHHHHCC--SSSCSSSHHHHH-HHHHHHHHHHHHHHHHTCCGG---GEEEESCHHHHHHHHHHHTGG
T ss_pred cCCCCHHHHHHHHHHHHhcC--CCCCCccHHHHH-HHHHHHHHHHHHHHHhCCCCC---eEEEeCChHHHHHHHHHHHhh
Confidence 34679999999988876433 233323311211 223444467889999999753 2344555667888888887
Q ss_pred -ccCCCEEeecCCCCCccccCCccccccc-cccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CC
Q 016668 189 -LKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PR 264 (385)
Q Consensus 189 -l~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~ 264 (385)
++|||+|+++++.|.++... ... ....|..+..+ +++++++.+|+++|++.+++ ++++|++..+++ |.
T Consensus 109 ~~~~gd~vi~~~~~~~~~~~~-----~~~~~~~~g~~v~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~ 180 (406)
T 3cai_A 109 RAGLGYEVIVSRLDDEANIAP-----WLRAAHRYGAKVKWA--EVDIETGELPTWQWESLISK-STRLVAVNSASGTLGG 180 (406)
T ss_dssp GGBTTCEEEEETTSCGGGTHH-----HHHHHHHHBCEEEEE--CCCTTTCCCCGGGHHHHCCT-TEEEEEEESBCTTTCB
T ss_pred ccCCCCEEEEcCCccHHHHHH-----HHHHHHhcCCeEEEE--ecCcccCCcCHHHHHHHhCC-CceEEEEeCCcCCccc
Confidence 89999999999877554221 001 01146544444 45545678999999999865 789988876665 56
Q ss_pred CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccEE-EEEEeCCCCchhHHHHHHh
Q 016668 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGG-MIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~GprgG-~I~~~~~~~~~~~~~~~i~ 341 (385)
..|+++|.++|+++|+++++|++|..|.. +.++. +.|++++|+||++ ||++| ++++++ ++.+++.
T Consensus 181 ~~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~~K~~-g~~~G~~~~~~~------~~~~~l~ 248 (406)
T 3cai_A 181 VTDLRAMTKLVHDVGALVVVDHSAAAPYR-----LLDIRETDADVVTVNAHAWG-GPPIGAMVFRDP------SVMNSFG 248 (406)
T ss_dssp BCCCHHHHHHHHHTTCEEEEECTTTTTTC-----CCCHHHHCCSEEEEEGGGGT-SCSCEEEEESCH------HHHHTSC
T ss_pred cCCHHHHHHHHHHcCCEEEEEcccccCCC-----CCCchhcCCCEEEeehhhhc-CCCcCeEEEEeh------HHHhhcC
Confidence 78999999999999999999999976532 11222 6899999999976 67788 888877 5666664
Q ss_pred hccC-C-------CccCCChHHHHHHHHHHHHHhhC
Q 016668 342 NAVF-P-------GLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 342 ~~~f-p-------~~qg~p~~~~iaala~Al~e~~~ 369 (385)
.... . ...++++...++++..+++....
T Consensus 249 ~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 284 (406)
T 3cai_A 249 SVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAA 284 (406)
T ss_dssp CCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHT
T ss_pred CcccCCCCCccccccCCCccHHHHHHHHHHHHHHHH
Confidence 3321 0 11356777788888888876654
No 22
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.85 E-value=2.1e-20 Score=182.96 Aligned_cols=242 Identities=12% Similarity=0.051 Sum_probs=165.4
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
.+.+.++...+++.|++++...+...+ .....++....++++++++|.+..++ .+++.+|+.|+..
T Consensus 24 ~~~~~p~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~~--v~~~~gg~~al~~ 89 (393)
T 3kgw_A 24 RLLLGPGPSNLAPRVLAAGSLRMIGHM------------QKEMLQIMEEIKQGIQYVFQTRNPLT--LVVSGSGHCAMET 89 (393)
T ss_dssp CEECSSSCCCCCHHHHHHTTCCCCCTT------------SHHHHHHHHHHHHHHHHHHTCCCSEE--EEESCCTTTHHHH
T ss_pred ceeccCCCCCCCHHHHHHhcccccCcc------------cHHHHHHHHHHHHHHHHHhCCCCCcE--EEEeCCcHHHHHH
Confidence 355678888899999999875332111 11123444556788999999976321 3455778889999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~ 263 (385)
++.++++|||+|++..+. |+++.+ ...+...|..+..++ ++ .++.+|++++++.+++.++++|+++.+++|
T Consensus 90 ~~~~~~~~gd~vl~~~~~---~~~~~~---~~~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 160 (393)
T 3kgw_A 90 ALFNLLEPGDSFLTGTNG---IWGMRA---AEIADRIGARVHQMI--KK-PGEHYTLQEVEEGLAQHKPVLLFLVHGESS 160 (393)
T ss_dssp HHHHHCCTTCEEEEEESS---HHHHHH---HHHHHHTTCEEEEEE--CC-TTCCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHhcCCCCCEEEEEeCC---chhHHH---HHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHhhCCCcEEEEeccCCc
Confidence 999999999999998653 321111 012345676555555 44 345799999999997657999988776654
Q ss_pred --CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
...|+++|.++|+++|++|++|++|+.|.. +..++ +.|++++|+||++.|+.| |++++++ ++.+
T Consensus 161 tG~~~~l~~i~~l~~~~~~~li~De~~~~g~~-----~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~------~~~~ 229 (393)
T 3kgw_A 161 TGVVQPLDGFGELCHRYQCLLLVDSVASLGGV-----PIYMDQQGIDIMYSSSQKVLNAPPGISLISFND------KAKY 229 (393)
T ss_dssp TTEECCCTTHHHHHHHTTCEEEEECTTTTTTS-----CCCTTTTTCCEEEEESSSTTCCCSSCEEEEECH------HHHH
T ss_pred chhhccHHHHHHHHHHcCCEEEEECCccccCc-----ccchhhcCCCEEEecCcccccCCCceeEEEECH------HHHH
Confidence 567899999999999999999999975532 12222 679999999999977665 8888877 5666
Q ss_pred HHhhccCC----------------------CccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 339 AINNAVFP----------------------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 339 ~i~~~~fp----------------------~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
++.....+ ...++++...++++..+++......+++..+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 292 (393)
T 3kgw_A 230 KVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRH 292 (393)
T ss_dssp HHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 66432111 112466778888888888765543344444433
No 23
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.85 E-value=2.7e-20 Score=184.89 Aligned_cols=253 Identities=15% Similarity=0.161 Sum_probs=167.2
Q ss_pred ccCChHHHHHHHHHHHHhh----h--ccccc----------cCCCC----CcHHHHHHHhhHhhccCCCCCCCCCCCCCc
Q 016668 84 GEADPEVCEIITKEKERQF----K--SLELI----------ASENF----TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN 143 (385)
Q Consensus 84 ~~~dp~~~~~i~~e~~~~~----~--~l~Li----------asen~----~s~~V~~al~s~l~~~y~~g~p~~r~~~G~ 143 (385)
+.+++++++.+++.+.+.. . ++.+- .++++ .+|.+.+++...+. +|..++.+.+.+.|.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ld~~s~~~l~~~~~p~v~~a~~~~l~-~~~~~~~~~~~~~g~ 102 (409)
T 3kki_A 24 PQLPDFIQNKIDHYIENYFDINKNGKHLVLGKQASPDDIILQSNDYLALANHPLIKARLAKSLL-EEQQSLFMSASFLQN 102 (409)
T ss_dssp CCCCHHHHHHHHHHHHHHTTTSTTSSCTTCCCCCCTTSEECCCSCTTCCTTCHHHHHHHHHHHH-SCCCCCCSBGGGGCS
T ss_pred ccchHHHHHHHHHHHHHHhhhccCCCeeeeCCCCCCceEEeeccCccCCcCCHHHHHHHHHHHH-HcCCCCCccccccCC
Confidence 6788999999877655421 1 12221 22332 48999999988775 444344443333342
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcce
Q 016668 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (385)
Q Consensus 144 ~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~ 223 (385)
. ++.+.+++++++++|.+. .+.+++|++|+..++.++++|||.|++.++.|+++.. .+...|..
T Consensus 103 ~---~~~~~l~~~la~~~g~~~-----~i~~~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~ 166 (409)
T 3kki_A 103 D---YDKPMIEKRLAKFTGFDE-----CLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWE--------GARYANAQ 166 (409)
T ss_dssp T---TTSCHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHH--------HHHHTTCE
T ss_pred c---HHHHHHHHHHHHHhCCCe-----EEEecchHHHHHHHHHHhcCCCCEEEECCCcCHHHHH--------HHHHcCCe
Confidence 2 122234557888999876 4678999999999999999999999999886654321 33455653
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccc-cCc-cc
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VA 299 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~-~~ 299 (385)
+++++ .+|+++|++.+++.++++|+++++++ |...++++|+++|+++|++|++|++|..|... .|. ..
T Consensus 167 --~~~~~------~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~ 238 (409)
T 3kki_A 167 --AHPFM------HNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLL 238 (409)
T ss_dssp --EEEEC------TTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHH
T ss_pred --EEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcch
Confidence 33432 26899999999766689999987765 46789999999999999999999999655432 111 00
Q ss_pred --CCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhccCCC-ccCCChHHHHHHHHHHHHHhh
Q 016668 300 --DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAVFPG-LQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 300 --~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~-~qg~p~~~~iaala~Al~e~~ 368 (385)
..+. ..|+++.|+||++.++ ||+++++++ +.+.+.....+. ..++++...+++...+++...
T Consensus 239 ~~~~~~~~~di~~~s~sK~~~~~-gg~v~~~~~------~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~ 304 (409)
T 3kki_A 239 AELGLTREVHFMTASLAKTFAYR-AGAIWCNNE------VNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIE 304 (409)
T ss_dssp HHHTCGGGCSEEEEESSSTTCSS-CEEEEESSS------GGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHH
T ss_pred hhcCCCCCCCEEEeecchhhCCC-ceEEEECHH------HHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHh
Confidence 1111 5689999999999766 899999885 333332211111 112345566667667776553
No 24
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.85 E-value=6.7e-21 Score=192.58 Aligned_cols=235 Identities=18% Similarity=0.158 Sum_probs=161.0
Q ss_pred ccCChHHHHHHHHHHHHhhhccccccCCCCCcHHHHHHHhhHhhcc-CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC
Q 016668 84 GEADPEVCEIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFN 162 (385)
Q Consensus 84 ~~~dp~~~~~i~~e~~~~~~~l~Liasen~~s~~V~~al~s~l~~~-y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg 162 (385)
.+..+++.+.++++.+++...++.+..+|. +.|++++....... ...+..+ |.-+... .+.+++++++++|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~--~~vl~A~~~~~~~~~~~~~~~g--~~y~~~~----~~~l~~~la~~~g 79 (431)
T 3ht4_A 8 GEKIAPIVKEVESQITEVHKRADEVIESNQ--FRVLESFGKHKISDSHFIPTTG--YGYDDIG----RDTLEKVYADVFG 79 (431)
T ss_dssp TTTSHHHHHHHHHHTHHHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSCCCCT--TCCSCHH----HHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHhchhhhhcCCCCC--CCCChhh----HHHHHHHHHHHhC
Confidence 344566667777788888888999988884 78888887542111 1111122 1113333 3334567999999
Q ss_pred CCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecC-CCCCccccCCccc--cccccccCcceEEEEeccccCCCCCCC
Q 016668 163 LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLD-LPHGGHLSHGFMT--PKRRVSGTSIYFESMPYRLDESTGLVD 239 (385)
Q Consensus 163 ~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~-~~~ggh~s~~~~~--~~~~~~~~g~~~~~i~~~~~~~~~~iD 239 (385)
.+.+. +.++++||+.|+..++.++++|||+|++.+ +.|+++....... ....+...|..+ ..++.++ ++.+|
T Consensus 80 ~~~~~--~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~--~~v~~~~-~~~~d 154 (431)
T 3ht4_A 80 AEAGL--VRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGY--NAVPLTE-GGLVD 154 (431)
T ss_dssp CSEEC--CBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEE--EECCBCT-TSSBC
T ss_pred CCccc--ccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEE--EEeCCCC-CCCcC
Confidence 98641 234567999999999999999999999998 7776543210000 001122346544 4444553 47899
Q ss_pred HHHHHHHhhhcCCcEEEEcC-CCCC-----CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCCC-CCcEEEE
Q 016668 240 YDMLEKTAILFRPKLIIAGA-SAYP-----RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (385)
Q Consensus 240 ~d~le~~i~~~~pklIi~~~-s~~~-----~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~ 310 (385)
+++|++.+++ ++|+|+++. ++|| ...|+++|+++|++ +|++|++|++|..+.. . ..++. ++|++++
T Consensus 155 ~e~l~~~l~~-~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~-~---~~~~~~g~Di~~~ 229 (431)
T 3ht4_A 155 FEAVAAAIHS-NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIE-E---QEPCHVGADLMAG 229 (431)
T ss_dssp HHHHHHHCCT-TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSS-S---CCGGGTTCSEEEE
T ss_pred HHHHHhhcCC-CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhcc-C---CCccccCCeEEEc
Confidence 9999999965 789998874 4444 34478999999999 9999999999865532 1 13444 7899999
Q ss_pred CCCccCcc---ccEEEEEEeCCCCchhHHHHHHhh
Q 016668 311 TTHKSLRG---PRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 311 S~hK~l~G---prgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
|+||+|.| +.||++++++ ++.+++..
T Consensus 230 S~sK~lgg~~~~~GG~v~~~~------~li~~l~~ 258 (431)
T 3ht4_A 230 SLIKNPGGGIVKTGGYIVGKE------QYVEACAY 258 (431)
T ss_dssp ETTSGGGTTTCSSCEEEEECH------HHHHHHHH
T ss_pred CccccCCCCCCCceEEEEecH------HHHHHHHH
Confidence 99999866 7899999987 67777755
No 25
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.84 E-value=4.8e-20 Score=181.27 Aligned_cols=239 Identities=10% Similarity=0.031 Sum_probs=163.3
Q ss_pred ccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHH
Q 016668 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (385)
Q Consensus 106 ~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~ 185 (385)
...++...+++.|++++...+.+. | +. ...++.+.+++++++++|++.+ + ..+.+.+|++|+..++
T Consensus 37 l~~~~~~~~~~~v~~a~~~~~~~~----------~-~~-~~~~~~~~~~~~la~~~g~~~~-~-~v~~t~g~t~al~~~~ 102 (393)
T 1vjo_A 37 LLGPGPSNAHPSVLQAMNVSPVGH----------L-DP-AFLALMDEIQSLLRYVWQTENP-L-TIAVSGTGTAAMEATI 102 (393)
T ss_dssp ECSSSCCCCCHHHHHHHSSCCCCT----------T-SH-HHHHHHHHHHHHHHHHHTCCCS-C-EEEESSCHHHHHHHHH
T ss_pred eccCCCCCCCHHHHHHHhcccccc----------c-CH-HHHHHHHHHHHHHHHHhCCCCC-c-EEEEeCchHHHHHHHH
Confidence 344667788999999987654321 1 11 1335666678899999999752 1 1244556778999999
Q ss_pred HHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--
Q 016668 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (385)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~-- 263 (385)
.++++|||+|++.++.|.+. ++. ..+...|..+..++ +++ ++.+|+++|++.+++.++++|++..+++|
T Consensus 103 ~~~~~~gd~Vl~~~~~~~~~-~~~-----~~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG 173 (393)
T 1vjo_A 103 ANAVEPGDVVLIGVAGYFGN-RLV-----DMAGRYGADVRTIS--KPW-GEVFSLEELRTALETHRPAILALVHAETSTG 173 (393)
T ss_dssp HHHCCTTCEEEEEESSHHHH-HHH-----HHHHHTTCEEEEEE--CCT-TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HhccCCCCEEEEEcCChhHH-HHH-----HHHHHcCCceEEEe--cCC-CCCCCHHHHHHHHhhCCceEEEEeccCCCcc
Confidence 99999999999998865441 011 12345666555444 543 56899999999986536899988766554
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHH
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i 340 (385)
...|+++|.++|+++|+++++|++|..|. .+..+. +.|++++|+||+|.+|.+ |++++++ ++.+++
T Consensus 174 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~-----~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~------~~~~~~ 242 (393)
T 1vjo_A 174 ARQPLEGVGELCREFGTLLLVDTVTSLGG-----VPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSS------RAIEKL 242 (393)
T ss_dssp EECCCTTHHHHHHHHTCEEEEECTTTTTT-----SCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECH------HHHHHH
T ss_pred eeccHHHHHHHHHHcCCEEEEECCccccC-----cCCcccccCccEEEEcCcccccCCCceEEEEECH------HHHHHH
Confidence 56789999999999999999999997542 122233 679999999999977654 8999887 566666
Q ss_pred hhc-----cC-C------------Ccc-CCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 341 NNA-----VF-P------------GLQ-GGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 341 ~~~-----~f-p------------~~q-g~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
... .+ . ... ++++...++++..+++......+++..++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~ 299 (393)
T 1vjo_A 243 QRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQR 299 (393)
T ss_dssp HTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred hccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 321 01 0 112 26777778888888876533323333333
No 26
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.84 E-value=5e-20 Score=179.84 Aligned_cols=234 Identities=12% Similarity=0.042 Sum_probs=159.5
Q ss_pred hccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHH
Q 016668 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (385)
Q Consensus 103 ~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~ 182 (385)
...++.+++..+++.|++++...+...+ + +...++.+.+++++++++|++.+ ..+.+.+.||++|+.
T Consensus 19 ~~~~~~pgp~~~~~~v~~a~~~~~~~~~-----------~-~~~~~~~~~~~~~la~~~g~~~~-~~~i~~~~ggt~al~ 85 (376)
T 3f0h_A 19 GMLNFTVGPVMSSEEVRAIGAEQVPYFR-----------T-TEFSSTMLENEKFMLEYAKAPEG-SKAVFMTCSSTGSME 85 (376)
T ss_dssp SCEECSSSSCCCCHHHHHHHTSCCCCCS-----------S-HHHHHHHHHHHHHHHHHHTCCTT-CEEEEESSCHHHHHH
T ss_pred CceeecCCCCCCcHHHHHHhcCCCCCCC-----------C-HHHHHHHHHHHHHHHHHhCCCCC-ceEEEEcCChhHHHH
Confidence 4577888999999999999876442211 1 12224555577899999999752 112233556789999
Q ss_pred HHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-
Q 016668 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA- 261 (385)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~- 261 (385)
.++.++++|||+|++.++.+-++ .+. ......|..+..++ .+ .++.+|++++++.++. ++++|+++.++
T Consensus 86 ~~~~~~~~~gd~vi~~~~~~~~~---~~~---~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~~~~n 155 (376)
T 3f0h_A 86 AVVMNCFTKKDKVLVIDGGSFGH---RFV---QLCEIHEIPYVALK--LE-HGKKLTKEKLYEYDNQ-NFTGLLVNVDET 155 (376)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHH---HHH---HHHHHTTCCEEEEE--CC-TTCCCCHHHHHTTTTS-CCCEEEEESEET
T ss_pred HHHHhccCCCCeEEEEeCChhhH---HHH---HHHHHcCCceEEEe--CC-CCCCCCHHHHHHhhcc-CceEEEEecccC
Confidence 99999999999999987633222 110 12334566555555 43 3468999999997754 78999887544
Q ss_pred -CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 262 -YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 262 -~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
+|...|+++|+++|+++|+++++|++|..|.. +..++ ++|++++|+||+|.|+.| |+++.++ ++.
T Consensus 156 ptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~------~~~ 224 (376)
T 3f0h_A 156 STAVLYDTMMIGEFCKKNNMFFVCDCVSAFLAD-----PFNMNECGADVMITGSQKVLACPPGISVIVLAP------RGV 224 (376)
T ss_dssp TTTEECCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEETTTTTCCCSSCEEEEECH------HHH
T ss_pred CcceecCHHHHHHHHHHcCCEEEEEcCccccCc-----cccccccCccEEEecCcccccCCCceEEEEECH------HHH
Confidence 45678999999999999999999999865432 12222 689999999999986655 7877776 566
Q ss_pred HHHhhccCC----------------CccCCChHHHHHHHHHHHHHhhCc
Q 016668 338 SAINNAVFP----------------GLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 338 ~~i~~~~fp----------------~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
+++...... +...++....++++..+++.+...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 273 (376)
T 3f0h_A 225 ERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKH 273 (376)
T ss_dssp HHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 666532111 123355666667777788765543
No 27
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.84 E-value=5.4e-20 Score=180.63 Aligned_cols=226 Identities=15% Similarity=0.086 Sum_probs=155.7
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
++...+++.|++++...+.+. + +... ......+++++++++|++.+ ..+.+.+|+.|+..++.++
T Consensus 15 ~~~~~~~~~v~~a~~~~~~~~--------~---~~~~-~~~~~~l~~~la~~~g~~~~---~v~~t~g~t~a~~~~~~~~ 79 (392)
T 2z9v_A 15 AGPVNAYPEVLRGLGRTVLYD--------Y---DPAF-QLLYEKVVDKAQKAMRLSNK---PVILHGEPVLGLEAAAASL 79 (392)
T ss_dssp SSCCCCCHHHHHHTTSCCCCT--------T---SHHH-HHHHHHHHHHHHHHTTCSSC---CEEESSCTHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHhcccccc--------c---cHHH-HHHHHHHHHHHHHHhCCCCC---EEEEeCCchHHHHHHHHHh
Confidence 455677899999987654321 1 1121 23333467789999999753 2355567788999999999
Q ss_pred ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh-cCCcEEEEcCCCC--CCC
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGASAY--PRD 265 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~-~~pklIi~~~s~~--~~~ 265 (385)
++|||+|+++++.|.++. +. ..+...|..+..++ +++ ++.+|++++++.+++ .++++|++..+++ |..
T Consensus 80 ~~~gd~Vl~~~~~~~~~~---~~---~~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 150 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG---FG---YWAKRYSPHLLEIE--VPY-NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTI 150 (392)
T ss_dssp CCTTCCEEEEESSHHHHH---HH---HHHHHHCSCEEEEE--CCT-TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEE
T ss_pred cCCCCEEEEecCCcccHH---HH---HHHHHcCCceEEee--CCC-CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCcee
Confidence 999999999987554331 10 11223465555555 443 467999999999853 3689998877665 467
Q ss_pred CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhh
Q 016668 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~ 342 (385)
.|+++|.++|+++|+++++|++|+.|.. +.++. +.|++++|+||++.||.| |++++++ ++.+++..
T Consensus 151 ~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~------~~~~~l~~ 219 (392)
T 2z9v_A 151 NPIDAIGALVSAHGAYLIVDAVSSFGGM-----KTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSE------RAWAKMKA 219 (392)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTBTTB-----SCCGGGGTCSEEEECSSSTTCCCSCCEEEEECH------HHHHHHHT
T ss_pred ccHHHHHHHHHHcCCeEEEEcccccCCc-----ccccccccceEEEecCcccccCCCceeEEEECH------HHHHHhhh
Confidence 8999999999999999999999975432 21232 679999999999888766 8998887 56666643
Q ss_pred cc-------------------CCCccCCChHHHHHHHHHHHHHhhC
Q 016668 343 AV-------------------FPGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 343 ~~-------------------fp~~qg~p~~~~iaala~Al~e~~~ 369 (385)
.. .....++++...++++..+++.+..
T Consensus 220 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 265 (392)
T 2z9v_A 220 NPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLN 265 (392)
T ss_dssp CTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 10 0112356677777777777776543
No 28
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.84 E-value=7.1e-20 Score=179.89 Aligned_cols=232 Identities=17% Similarity=0.171 Sum_probs=157.6
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceeecCCcHHHHHHHHHHh-
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPANFEVYTAI- 188 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r-~~~G~~~~~~le~~~~~~la~lfg~-~~~~~~~~V~~~sGs~A~~~a~~al- 188 (385)
...++.|++++...+.+.+ +++... +..+... ......+++++++++|. +.+ ..+.+.+|++|+..++.++
T Consensus 33 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~~~~~ 106 (406)
T 1kmj_A 33 AQKPSQVIDAEAEFYRHGY--AAVHRGIHTLSAQA-TEKMENVRKRASLFINARSAE---ELVFVRGTTEGINLVANSWG 106 (406)
T ss_dssp CCCCHHHHHHHHHHHHHTC--CCCSSCSSHHHHHH-HHHHHHHHHHHHHHTTCSCGG---GEEEESSHHHHHHHHHHHTH
T ss_pred CCCCHHHHHHHHHHHHhhc--CCCCCCcchHHHHH-HHHHHHHHHHHHHHcCCCCCC---eEEEeCChhHHHHHHHHHhh
Confidence 3678999999988876532 223211 1111111 23333467789999998 442 2344556678999999999
Q ss_pred ---ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--C
Q 016668 189 ---LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (385)
Q Consensus 189 ---l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~ 263 (385)
++|||+|++.++.|.+... .+. ..+...|..+..++ ++ +++.+|++++++.+++ ++++|++..+++ |
T Consensus 107 ~~~~~~gd~vl~~~~~~~~~~~-~~~---~~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG 178 (406)
T 1kmj_A 107 NSNVRAGDNIIISQMEHHANIV-PWQ---MLCARVGAELRVIP--LN-PDGTLQLETLPTLFDE-KTRLLAITHVSNVLG 178 (406)
T ss_dssp HHHCCTTCEEEEETTCCGGGTH-HHH---HHHHHHTCEEEEEC--BC-TTSCBCGGGHHHHCCT-TEEEEEEESBCTTTC
T ss_pred hhcCCCCCEEEEecccchHHHH-HHH---HHHHhCCCEEEEEe--cC-CCCCcCHHHHHHHhcc-CCeEEEEeCCCcccc
Confidence 8999999999987655421 110 11234565544444 54 3578999999999865 789998876654 5
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHH
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i 340 (385)
...|+++|.++|+++|+++++|++|+.|.. +..+. +.|++++|+||++ ||.| |++++++ ++.+++
T Consensus 179 ~~~~l~~i~~l~~~~~~~li~D~~~~~g~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~~~~~~------~~~~~~ 246 (406)
T 1kmj_A 179 TENPLAEMITLAHQHGAKVLVDGAQAVMHH-----PVDVQALDCDFYVFSGHKLY-GPTGIGILYVKE------ALLQEM 246 (406)
T ss_dssp CBCCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECH------HHHHHC
T ss_pred CcCCHHHHHHHHHHcCCEEEEEchhhcCCC-----CCcccccCCCEEEEEchhcc-CCCCcEEEEEeH------HHHhhc
Confidence 678999999999999999999999976532 11222 6899999999988 7776 9999986 677766
Q ss_pred hhccCC---------------------CccCCChHHHHHHHHHHHHHhhC
Q 016668 341 NNAVFP---------------------GLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 341 ~~~~fp---------------------~~qg~p~~~~iaala~Al~e~~~ 369 (385)
...... ...+++....++++..+++.+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 296 (406)
T 1kmj_A 247 PPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSA 296 (406)
T ss_dssp CCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHH
Confidence 533211 11346777888888777776543
No 29
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.83 E-value=2.5e-19 Score=176.18 Aligned_cols=259 Identities=12% Similarity=0.093 Sum_probs=167.9
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
+++..+.+.++..+.+... ....+++...++ .+++.+.+++...+.+. ..+|+.. .|. .++++.+.+++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~l~~~la~~l~ 81 (386)
T 1u08_A 10 SKLPQLGTTIFTQMSALAQ-QHQAINLSQGFPDFDGPRYLQERLAHHVAQG-ANQYAPM---TGV---QALREAIAQKTE 81 (386)
T ss_dssp CSCCCCCCCHHHHHHHHHH-HTTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TCC---HHHHHHHHHHHH
T ss_pred hhhhcCCccHHHHHHHHHh-cCCeEEecCCCCCCCCCHHHHHHHHHHHHhh-ccCCCCC---CCC---HHHHHHHHHHHH
Confidence 4455566666655544322 224456654433 35799999998877541 2234431 133 378888888888
Q ss_pred HHcCCCCCCCc-ceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCC
Q 016668 159 AAFNLDENKWG-VNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL 237 (385)
Q Consensus 159 ~lfg~~~~~~~-~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~ 237 (385)
+.+|.+.+ .. ..+.+.+|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++++++.
T Consensus 82 ~~~g~~~~-~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~ 150 (386)
T 1u08_A 82 RLYGYQPD-ADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYAP--------AIALSGGIVKRMA--LQPPHFR 150 (386)
T ss_dssp HHHSCCCC-TTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CCTTTCC
T ss_pred HHhCCCCC-CCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEee--cCcccCc
Confidence 88886421 11 13445566789999999999999999999987755421 2345666554444 5544567
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCCCCC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCC---C--C-CCc
Q 016668 238 VDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F--K-YCD 306 (385)
Q Consensus 238 iD~d~le~~i~~~~pklIi~~~s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p---~--~-gaD 306 (385)
+|+++|++.++. ++++|+++.+++| ... ++++|.++|+++|+++|+|++|. ++...|....+ + . +.|
T Consensus 151 ~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~ 228 (386)
T 1u08_A 151 VDWQEFAALLSE-RTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYE-HINFSQQGHASVLAHPQLRERA 228 (386)
T ss_dssp CCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTT-TCBCCSSCCCCGGGSHHHHTTE
T ss_pred CCHHHHHHhhcc-cCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEcccc-ccccCCCCCcChhcccCccCcE
Confidence 999999999864 7899888776665 444 37899999999999999999985 34433321111 2 1 568
Q ss_pred EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 307 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
+++.|+||+| +|.|.|++++++ ++.+.+......... +++....+++..+++..
T Consensus 229 i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~~ 284 (386)
T 1u08_A 229 VAVSSFGKTYHMTGWKVGYCVAPA------PISAEIRKVHQYLTF-SVNTPAQLALADMLRAE 284 (386)
T ss_dssp EEEEEHHHHTTCGGGCCEEEECCH------HHHHHHHHHHHHHTS-SCCHHHHHHHHHHHHHC
T ss_pred EEEecchhhcCCcccceEEEEcCH------HHHHHHHHHHHhhcc-CCChHHHHHHHHHHhCC
Confidence 9999999998 467789999886 566666543221112 23334455666677653
No 30
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.83 E-value=9.5e-20 Score=179.11 Aligned_cols=240 Identities=13% Similarity=0.061 Sum_probs=160.3
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCccee-ecCCcHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNV-QPLSGSPANFE 183 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V-~~~sGs~A~~~ 183 (385)
+...++...+++.|++++.+.+...| +...+.....+++++++++|.+++. +| .+.+|++|+..
T Consensus 20 ~~~~~~p~~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~l~~~la~~~~~~~~~---~v~~~~g~t~al~~ 84 (396)
T 2ch1_A 20 IMMGPGPSNCSKRVLTAMTNTVLSNF------------HAELFRTMDEVKDGLRYIFQTENRA---TMCVSGSAHAGMEA 84 (396)
T ss_dssp BCCSSSSCCCCHHHHHHTTSCCCCTT------------CHHHHHHHHHHHHHHHHHHTCCCSC---EEEESSCHHHHHHH
T ss_pred eeecCCCCCCCHHHHHHhccccccCC------------ChhHHHHHHHHHHHHHHHhCCCCCc---EEEECCcHHHHHHH
Confidence 44556666778999999875442211 1222333344677899999997631 34 45567789999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~- 262 (385)
++.++++|||+|+++++.|.++. + ...+...|..+..++ ++ .++.+|++++++.+++.++++|++..+++
T Consensus 85 ~~~~~~~~gd~vl~~~~~~~~~~---~---~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~np 155 (396)
T 2ch1_A 85 MLSNLLEEGDRVLIAVNGIWAER---A---VEMSERYGADVRTIE--GP-PDRPFSLETLARAIELHQPKCLFLTHGDSS 155 (396)
T ss_dssp HHHHHCCTTCEEEEEESSHHHHH---H---HHHHHHTTCEEEEEE--CC-TTSCCCHHHHHHHHHHHCCSEEEEESEETT
T ss_pred HHHHhcCCCCeEEEEcCCcccHH---H---HHHHHHcCCceEEec--CC-CCCCCCHHHHHHHHHhCCCCEEEEECCCCC
Confidence 99999999999999998665431 0 012345676555555 44 35689999999998654789998876654
Q ss_pred -CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 263 -PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 263 -~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
|...|+++|.++|+++|+++|+|++|..|.. +..+. ++|++++|+||++.||.| |++++++ ++.+
T Consensus 156 tG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~------~~~~ 224 (396)
T 2ch1_A 156 SGLLQPLEGVGQICHQHDCLLIVDAVASLCGV-----PFYMDKWEIDAVYTGAQKVLGAPPGITPISISP------KALD 224 (396)
T ss_dssp TTEECCCTTHHHHHHHTTCEEEEECTTTBTTB-----CCCTTTTTCCEEECCCC-CCCCCSSCEEEEECH------HHHH
T ss_pred CceecCHHHHHHHHHHcCCEEEEEccccccCC-----ccchhhcCcCEEEEcCCccccCCCCeEEEEECH------HHHH
Confidence 4567899999999999999999999875422 22233 579999999999877655 8888876 4555
Q ss_pred HHhhc-------c---------C------CCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 339 AINNA-------V---------F------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 339 ~i~~~-------~---------f------p~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
.+... . + ....++++...++++..+++......+++..+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 287 (396)
T 2ch1_A 225 VIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRR 287 (396)
T ss_dssp HHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 55321 0 1 1123456666777777788765433344444433
No 31
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.83 E-value=5.2e-20 Score=182.76 Aligned_cols=234 Identities=15% Similarity=0.155 Sum_probs=157.4
Q ss_pred cCCCCCcHHHHHHHhhHhh--ccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLT--NKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~--~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~ 185 (385)
++...+++.|++++...+. +.+ ++|.. .+..+. ...+..+.+++++++++|++.+ ..+++.+|++|+..++
T Consensus 29 ~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~l~~~la~~~~~~~~---~v~~~~ggt~a~~~a~ 102 (423)
T 3lvm_A 29 SATTPVDPRVAEKMMQFMTMDGTF--GNPASRSHRFGW-QAEEAVDIARNQIADLVGADPR---EIVFTSGATESDNLAI 102 (423)
T ss_dssp TTCCCCCHHHHHHHTTSSSTTSCC--SCTTCTTSHHHH-HHHHHHHHHHHHHHHHHTCCGG---GEEEESSHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHhhcccc--cCCCccccchhH-HHHHHHHHHHHHHHHHcCCCCC---eEEEeCChHHHHHHHH
Confidence 4455779999999988776 444 34443 222222 2234455578899999999864 2345566788999999
Q ss_pred HHhcc----CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 186 TAILK----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 186 ~all~----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.++++ |||+|++.++.|.++... ...+...|..+..++ +++ ++.+|+++|++.+++ ++++|++..++
T Consensus 103 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~-----~~~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~i~~-~~~~v~~~~~~ 173 (423)
T 3lvm_A 103 KGAANFYQKKGKHIITSKTEHKAVLDT-----CRQLEREGFEVTYLA--PQR-NGIIDLKELEAAMRD-DTILVSIMHVN 173 (423)
T ss_dssp HHHHHHHTTTCCEEEEETTSCHHHHHH-----HHHHHHTTCEEEEEC--CCT-TSCCCHHHHHHHCCT-TEEEEECCSBC
T ss_pred HHHHHhhccCCCEEEECCccchHHHHH-----HHHHHHcCCEEEEec--cCC-CCccCHHHHHHhcCC-CcEEEEEeCCC
Confidence 98874 899999998876554211 011133466544444 553 678999999999965 78888887665
Q ss_pred C--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccEEEEEEeCCCCchhHHH
Q 016668 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELE 337 (385)
Q Consensus 262 ~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~ 337 (385)
+ |...|+++|.++|+++|++||+|++|+.|.. +..+. +.|++++|+||++.++..|+++++++. .
T Consensus 174 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~------~ 242 (423)
T 3lvm_A 174 NEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKL-----PIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKP------R 242 (423)
T ss_dssp TTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTT------B
T ss_pred CCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCC-----CcChhhcCCCEEEechHHhcCCCCeEEEEEeccc------c
Confidence 4 4678999999999999999999999866532 22222 679999999996543335888888752 2
Q ss_pred HHHhhccC------CCccCCChHHHHHHHHHHHHHhh
Q 016668 338 SAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 338 ~~i~~~~f------p~~qg~p~~~~iaala~Al~e~~ 368 (385)
+.+..... ....++++...++++..+++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 279 (423)
T 3lvm_A 243 VRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAK 279 (423)
T ss_dssp CCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHH
T ss_pred CCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHH
Confidence 22222111 11234567778888877776553
No 32
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.83 E-value=7.2e-20 Score=176.68 Aligned_cols=235 Identities=13% Similarity=0.051 Sum_probs=158.5
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+.+.++...+++.|++++...+... + +.. .......+++++++++|++.+ ..+.+.+|++|+..+
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~~--------~---~~~-~~~~~~~l~~~la~~~g~~~~---~i~~~~g~t~a~~~~ 67 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLHH--------R---TEA-AREVFLKARGLLREAFRTEGE---VLILTGSGTLAMEAL 67 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCCT--------T---SHH-HHHHHHHHHHHHHHHHTCSSE---EEEEESCHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCCc--------c---CHH-HHHHHHHHHHHHHHHhCCCCc---eEEEcCchHHHHHHH
Confidence 4567888899999999998665311 1 112 123334467789999999753 234556778899999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+.++++|||+|+++++.|.++. +. ..+...|..+..++ ++ .++.+|++++++ .++|+|++..+++
T Consensus 68 ~~~~~~~gd~vl~~~~~~~~~~---~~---~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~----~~~~~v~~~~~~npt 134 (352)
T 1iug_A 68 VKNLFAPGERVLVPVYGKFSER---FY---EIALEAGLVVERLD--YP-YGDTPRPEDVAK----EGYAGLLLVHSETST 134 (352)
T ss_dssp HHHHCCTTCEEEEEECSHHHHH---HH---HHHHHTTCEEEEEE--CC-TTCCCCTTTSCC----SSCSEEEEESEETTT
T ss_pred HHhccCCCCeEEEEeCCchhHH---HH---HHHHHcCCceEEEe--CC-CCCCCCHHHHhc----cCCcEEEEEEecCCc
Confidence 9999999999999988654432 10 11233566555444 44 346789888876 3789998877665
Q ss_pred CCCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 263 PRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
|...|+++|.++|+++ |+++++|++|..|.. +..+. +.|++++|+||++.||.| |+++++++ +.
T Consensus 135 G~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~------~~ 203 (352)
T 1iug_A 135 GALADLPALARAFKEKNPEGLVGADMVTSLLVG-----EVALEAMGVDAAASGSQKGLMCPPGLGFVALSPR------AL 203 (352)
T ss_dssp TEECCHHHHHHHHHHHCTTCEEEEECTTTBTTB-----CCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHH------HH
T ss_pred ceecCHHHHHHHHHhhCCCCEEEEECCccccCc-----ceeccccCeeEEEecCcccccCCCceeEEEECHH------HH
Confidence 4678999999999999 999999999975532 21232 689999999999888765 88888773 33
Q ss_pred HH-------------HhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 338 SA-------------INNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 338 ~~-------------i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
++ +.........++++...++++..+++.+... +++..+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~ 257 (352)
T 1iug_A 204 ERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALK 257 (352)
T ss_dssp HTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHH
T ss_pred HHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 32 1111011223567777788888888765433 44444433
No 33
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.83 E-value=9.8e-20 Score=176.94 Aligned_cols=229 Identities=14% Similarity=0.173 Sum_probs=157.1
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
++..++++.|++++...+.+.+ ++|...+..+ ....++.+.+++++++++|++.+ ..+.+++|+.|+..++.++
T Consensus 7 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~~~---~i~~~~g~~~a~~~~~~~~ 80 (382)
T 4hvk_A 7 TSAKPVDERILEAMLPYMTESF--GNPSSVHSYG-FKAREAVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGY 80 (382)
T ss_dssp TTCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHH-HHHHHHHHHHHHHHHHHTTCTTE---EEEEESSHHHHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHhhc--CCCcccchHH-HHHHHHHHHHHHHHHHHcCCCcC---eEEEECCchHHHHHHHHHh
Confidence 4556789999999998886644 4555433222 22335555678899999999863 1344555667999999998
Q ss_pred c----cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC-
Q 016668 189 L----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP- 263 (385)
Q Consensus 189 l----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~- 263 (385)
+ +|||+|+++++.|.++... ...+...|..+..++ ++ +++.+|+++|++.+++ ++++|++..+++|
T Consensus 81 ~~~~~~~gd~vi~~~~~~~~~~~~-----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~npt 151 (382)
T 4hvk_A 81 AMRNARKGKHILVSAVEHMSVINP-----AKFLQKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEI 151 (382)
T ss_dssp HHHHGGGCCEEEEETTCCHHHHHH-----HHHHHHTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTT
T ss_pred hhhhcCCCCEEEECCCCcHHHHHH-----HHHHHhcCCEEEEec--cC-CCCCcCHHHHHHHhcc-CceEEEEECCCCCc
Confidence 7 9999999998876554321 011223466555444 55 4678999999999965 7888888776654
Q ss_pred -CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCcccc-EEEEEEeCCCCchhHHHHH
Q 016668 264 -RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESA 339 (385)
Q Consensus 264 -~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gpr-gG~I~~~~~~~~~~~~~~~ 339 (385)
...|+++|.++|+++|+ +++|++|+.|.. +.++. ++|++++|+||++ ||. .|+++++++. .
T Consensus 152 G~~~~~~~i~~l~~~~~~-li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~g~g~~~~~~~~--------~ 216 (382)
T 4hvk_A 152 GTIQPVEEISEVLAGKAA-LHIDATASVGQI-----EVDVEKIGADMLTISSNDIY-GPKGVGALWIRKEA--------K 216 (382)
T ss_dssp CBBCCHHHHHHHHSSSSE-EEEECTTTBTTB-----CCCHHHHTCSEEEEESGGGT-SCTTCEEEEEETTC--------C
T ss_pred eeeCCHHHHHHHHHHcCE-EEEEhHHhcCCC-----CCCchhcCCCEEEEeHHHhc-CCCceEEEEEcCcc--------C
Confidence 67899999999999999 999999976533 22222 6899999999965 665 4888888751 1
Q ss_pred HhhccCC------CccCCChHHHHHHHHHHHHHh
Q 016668 340 INNAVFP------GLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 340 i~~~~fp------~~qg~p~~~~iaala~Al~e~ 367 (385)
+....+. ...++++...++++..+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 250 (382)
T 4hvk_A 217 LQPVILGGGQENGLRSGSENVPSIVGFGKAAEIT 250 (382)
T ss_dssp CCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH
T ss_pred cCcccccCCCcCccccCCcCHHHHHHHHHHHHHH
Confidence 1111110 113456777788887777644
No 34
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.83 E-value=4.6e-20 Score=180.81 Aligned_cols=230 Identities=15% Similarity=0.107 Sum_probs=153.7
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceeecCCcHHHHHHHHHHh
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
.-.+++.|++++...+.+. ..+|+.. ..++++.+++++++.+|. +.+ ..+.+++|++|+..++.++
T Consensus 38 ~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~l~~~la~~l~~~~g~~~~~~---~i~~~~g~~~a~~~~~~~l 105 (391)
T 3dzz_A 38 DFKIAPEIMASMEEKLKVA-AFGYESV--------PAEYYKAVADWEEIEHRARPKED---WCVFASGVVPAISAMVRQF 105 (391)
T ss_dssp SSCCCHHHHHHHHHHHTTC-CCCCBCC--------CHHHHHHHHHHHHHHHSCCCCGG---GEEEESCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcC-cCCCCCC--------CHHHHHHHHHHHHHHhCCCCCHH---HEEECCCHHHHHHHHHHHh
Confidence 3346899999998877542 2233321 246777788899999994 442 2334445578999999999
Q ss_pred ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CC-
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RD- 265 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~- 265 (385)
++|||+|++.++.|.++.. .+...|..+..++++....++.+|++++++.++..++|+|++..+++| ..
T Consensus 106 ~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~ 177 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNMFYS--------VIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAW 177 (391)
T ss_dssp SCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCC
T ss_pred CCCCCeEEECCCCcHHHHH--------HHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCccc
Confidence 9999999999987655321 334566654444432122233599999999997457899888777665 34
Q ss_pred --CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-----CCc--EEEECCCccC--ccccEEEEEEeCCCCchh
Q 016668 266 --FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGV 334 (385)
Q Consensus 266 --~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-----gaD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~ 334 (385)
.++++|.++|+++|+++|+|++|. ++...+..+.++. ..| +++.|+||++ +|.+.|+++++++
T Consensus 178 ~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~----- 251 (391)
T 3dzz_A 178 SEEEVKRIAELCAKHQVLLISDEIHG-DLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP----- 251 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTT-TCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH-----
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccc-cccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH-----
Confidence 468999999999999999999984 4444432222221 257 8899999996 6788899999743
Q ss_pred HHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 335 ~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++.+.+..........+++...+++...+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (391)
T 3dzz_A 252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE 283 (391)
T ss_dssp HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc
Confidence 67776654422111223444555555556654
No 35
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.83 E-value=9.3e-20 Score=179.91 Aligned_cols=223 Identities=19% Similarity=0.191 Sum_probs=155.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.++.+++++...+. +|..++.+.+|..| .+..++ .++.+++++|++. .+.+++|+.|+..++.++++||
T Consensus 60 ~~~~v~~a~~~~~~-~~~~~~~~~~~~~g~~~~~~~----l~~~la~~~g~~~-----~i~~~sGs~a~~~~~~~~~~~g 129 (401)
T 1fc4_A 60 NHPDLIAAAKAGMD-SHGFGMASVRFICGTQDSHKE----LEQKLAAFLGMED-----AILYSSCFDANGGLFETLLGAE 129 (401)
T ss_dssp TCHHHHHHHHHHHH-HHCSCCCSCHHHHCCBHHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHTTHHHHCCTT
T ss_pred CCHHHHHHHHHHHH-HhCCCCCCCCcccCCcHHHHH----HHHHHHHHhCCCc-----EEEeCChHHHHHHHHHHHcCCC
Confidence 38999999987764 34334443343322 233333 4557888899873 4778999999999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCC--CCC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAY--PRD 265 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~--~~~ 265 (385)
|+|++.++.|+++.. .+...|..+. +++ .+|++++++.+++. ++++|+++.+++ |..
T Consensus 130 d~v~~~~~~~~~~~~--------~~~~~g~~~~--~~~------~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~ 193 (401)
T 1fc4_A 130 DAIISDALNHASIID--------GVRLCKAKRY--RYA------NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVI 193 (401)
T ss_dssp CEEEEETTCCHHHHH--------HHHTSCSEEE--EEC------TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEE
T ss_pred CEEEEcchhHHHHHH--------HHHHcCCceE--EEC------CCCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCC
Confidence 999999887654321 3445665443 332 25899999988642 689998877655 456
Q ss_pred CCHHHHHHHHHHcCcEEEEeccccccccc-cCcc-c--CCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHH
Q 016668 266 FDYPRMRQIADAVGALLMMDMAHISGLVA-ASVV-A--DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~~-~--~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i 340 (385)
.++++|.++|+++|+++|+|++|+.|+.. .+.. + ..+. +.|++++|+||++.|+.||++++++ ++.+.+
T Consensus 194 ~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~gG~~~~~~------~~~~~l 267 (401)
T 1fc4_A 194 ANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARK------EVVEWL 267 (401)
T ss_dssp CCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSCEEEEECH------HHHHHH
T ss_pred CCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCCEEEEcCH------HHHHHH
Confidence 78999999999999999999999767753 2221 1 1222 5799999999999666699999976 677766
Q ss_pred hhccCCC-ccCCChHHHHHHHHHHHHHhh
Q 016668 341 NNAVFPG-LQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 341 ~~~~fp~-~qg~p~~~~iaala~Al~e~~ 368 (385)
.....+. ..++++....++...+++.+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 296 (401)
T 1fc4_A 268 RQRSRPYLFSNSLAPAIVAASIKVLEMVE 296 (401)
T ss_dssp HHHCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred HHhCcCceeCCCCCHHHHHHHHHHHHHHh
Confidence 5533111 133566666777777777653
No 36
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.83 E-value=2.4e-19 Score=179.68 Aligned_cols=222 Identities=17% Similarity=0.183 Sum_probs=155.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCc-HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGN-EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~-~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.++.|++++...+.. +..++++.++..|. +...++ ++++++++|.+. .+.++||+.||..++.++++||
T Consensus 79 ~~~~v~~a~~~~~~~-~~~~~~~~~~~~G~~~~~~~l----~~~la~~~g~~~-----~i~~~sGs~a~~~al~~l~~~g 148 (427)
T 2w8t_A 79 FDPDVIAAGKEALEK-FGSGTCGSRMLNGTFHDHMEV----EQALRDFYGTTG-----AIVFSTGYMANLGIISTLAGKG 148 (427)
T ss_dssp GCHHHHHHHHHHHHH-HCSCCCSCTTTTCCCHHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCTT
T ss_pred CCHHHHHHHHHHHHH-hCCCCcccccccCCcHHHHHH----HHHHHHHhCCCc-----eEEecCcHHHHHHHHHHhcCCC
Confidence 679999999887754 43456665655564 433344 457888899863 5778999999999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc---CCcEEEEcCCCC--CCCCC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIAGASAY--PRDFD 267 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~---~pklIi~~~s~~--~~~~d 267 (385)
|.|++..+.|+++.. .+...|..+ +.++ .+|+++|++.+++. ++++|+++++++ |...+
T Consensus 149 d~vl~~~~~h~~~~~--------~~~~~g~~~--~~~~------~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~ 212 (427)
T 2w8t_A 149 EYVILDADSHASIYD--------GCQQGNAEI--VRFR------HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP 212 (427)
T ss_dssp CEEEEETTCCHHHHH--------HHHHSCSEE--EEEC------TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC
T ss_pred CEEEECCcccHHHHH--------HHHHcCCee--EEeC------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC
Confidence 999999887654321 334556543 3432 36999999998753 678998876654 46778
Q ss_pred HHHHHHHHHHcCcEEEEecccccccccc-Cc-cc--CCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 268 YPRMRQIADAVGALLMMDMAHISGLVAA-SV-VA--DPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 268 l~~I~~ia~~~ga~livD~ah~~Gli~~-g~-~~--~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+++|+++|+++|++||+|++|+.|.... +. .. ..+. ++|++++|+||+| |+.||+++++++ +.+.+..
T Consensus 213 l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~-g~~gG~v~~~~~------l~~~l~~ 285 (427)
T 2w8t_A 213 LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSV-GTVGGFVVSNHP------KFEAVRL 285 (427)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTT-CSCCEEEEECCT------TGGGGGG
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhh-ccCCCEEEeCHH------HHHHHHH
Confidence 9999999999999999999997665421 11 11 1122 5789999999998 588899999874 4444433
Q ss_pred ccCC-CccCCChHHHHHHHHHHHHHhh
Q 016668 343 AVFP-GLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 343 ~~fp-~~qg~p~~~~iaala~Al~e~~ 368 (385)
...+ ...++++...++++..+++.+.
T Consensus 286 ~~~~~~~~~~~~~~~~aa~~~al~~~~ 312 (427)
T 2w8t_A 286 ACRPYIFTASLPPSVVATATTSIRKLM 312 (427)
T ss_dssp TCHHHHSSCCCCHHHHHHHHHHHHHHT
T ss_pred hcccccccCCCCHHHHHHHHHHHHHHh
Confidence 2111 1123566677777777887664
No 37
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.83 E-value=3.1e-19 Score=175.48 Aligned_cols=257 Identities=13% Similarity=0.023 Sum_probs=167.7
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
++++..+++..+..+.+...+...-+++...++. +++.+.+++...+... ..+|+.. .|. .++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~l~~~la~~~ 76 (389)
T 1gd9_A 4 SDRLELVSASEIRKLFDIAAGMKDVISLGIGEPDFDTPQHIKEYAKEALDKG-LTHYGPN---IGL---LELREAIAEKL 76 (389)
T ss_dssp HHHHHHSCCCHHHHHHHHHHTCSSCEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TCC---HHHHHHHHHHH
T ss_pred hhHhHhCChhHHHHHHHHHhhhcCeEecCCCCCCCCCCHHHHHHHHHHHhCC-CCCCCCC---CCc---HHHHHHHHHHH
Confidence 4555666665544444433322244566544443 5789999998777542 2234431 233 37887778888
Q ss_pred HHHcCC--CCCCCcc-eeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC
Q 016668 158 LAAFNL--DENKWGV-NVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (385)
Q Consensus 158 a~lfg~--~~~~~~~-~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~ 234 (385)
.+.+|. +.+ - .+.+.+|++|+..++.++++|||+|++.++.|.++.. .+...|..+..++ ++++
T Consensus 77 ~~~~g~~~~~~---~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~ 143 (389)
T 1gd9_A 77 KKQNGIEADPK---TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP--------AVILAGGKPVEVP--TYEE 143 (389)
T ss_dssp HHHHCCCCCTT---TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH--------HHHHHTCEEEEEE--CCGG
T ss_pred HHHhCCCCCCC---CeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEec--cCCc
Confidence 888895 332 2 3455667889999999999999999999987755421 2345566555555 4432
Q ss_pred -CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccCc-ccC--CCC--
Q 016668 235 -TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK-- 303 (385)
Q Consensus 235 -~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~--p~~-- 303 (385)
++.+|++++++.+++ ++|+|++..+++| ... ++++|.++|+++|+++|+|++|..+ ...+. .++ .+.
T Consensus 144 ~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~ 221 (389)
T 1gd9_A 144 DEFRLNVDELKKYVTD-KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHF-IYDDARHYSIASLDGM 221 (389)
T ss_dssp GTTCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTC-BCTTCCCCCGGGSTTC
T ss_pred cCCCCCHHHHHHhcCc-CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhc-ccCCCCCCCHhhccCC
Confidence 357899999999865 6888888777665 444 5899999999999999999998644 33332 111 121
Q ss_pred -CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 304 -YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 304 -gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+.|+++.|+||++ +|.|.|++++++ ++.+++......... +++....++...+++
T Consensus 222 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~ 279 (389)
T 1gd9_A 222 FERTITVNGFSKTFAMTGWRLGFVAAPS------WIIERMVKFQMYNAT-CPVTFIQYAAAKALK 279 (389)
T ss_dssp GGGEEEEEESTTTTTCGGGCCEEEECCH------HHHHHHHHHHTTTTC-SCCHHHHHHHHHHHT
T ss_pred CCCEEEEecChhhcCCcccceEEEEECH------HHHHHHHHHHhhhcc-CCCHHHHHHHHHHHh
Confidence 3578999999998 466789999986 677777654433322 334444444455554
No 38
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.83 E-value=6.1e-20 Score=176.74 Aligned_cols=240 Identities=15% Similarity=0.069 Sum_probs=159.8
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+.+.+++..+++.|++++.+.+.+. + +.. ..+....+++++++++|.+.+ ....+.+.+|++|+..+
T Consensus 2 ~~~~~gp~~~~~~v~~a~~~~~~~~--------~---~~~-~~~~~~~l~~~la~~~g~~~~-~~~v~~t~g~t~a~~~~ 68 (353)
T 2yrr_A 2 LLLTPGPTPIPERVQKALLRPMRGH--------L---DPE-VLRVNRAIQERLAALFDPGEG-ALVAALAGSGSLGMEAG 68 (353)
T ss_dssp EECSSSSCCCCHHHHGGGGSCCCCT--------T---CHH-HHHHHHHHHHHHHHHHCCCTT-CEEEEESSCHHHHHHHH
T ss_pred ccCCCCCCCCCHHHHHHHhcccccc--------c---CHH-HHHHHHHHHHHHHHHhCCCCC-CceEEEcCCcHHHHHHH
Confidence 4567888899999999987655321 1 111 224445577889999999611 11234445667899999
Q ss_pred HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--
Q 016668 185 YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY-- 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~-- 262 (385)
+.++++ |+|+++++.|.++ .+ ...+...|..+..++ ++ +++.+|++++++.+++.++++|++..+++
T Consensus 69 ~~~~~~--d~vl~~~~~~~~~---~~---~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 137 (353)
T 2yrr_A 69 LANLDR--GPVLVLVNGAFSQ---RV---AEMAALHGLDPEVLD--FP-PGEPVDPEAVARALKRRRYRMVALVHGETST 137 (353)
T ss_dssp HHTCSC--CCEEEEECSHHHH---HH---HHHHHHTTCCEEEEE--CC-TTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred HHHhcC--CcEEEEcCCCchH---HH---HHHHHHcCCceEEEe--CC-CCCCCCHHHHHHHHHhCCCCEEEEEccCCCc
Confidence 998887 8999887654432 11 012345566555555 44 35679999999998754789998877665
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
|...|+++|.++|+++|+++++|++|..|.. +.++. +.|++++|+||++.||.| |++++++ ++.++
T Consensus 138 G~~~~~~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~------~~~~~ 206 (353)
T 2yrr_A 138 GVLNPAEAIGALAKEAGALFFLDAVTTLGML-----PFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASL------EARKA 206 (353)
T ss_dssp TEECCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCHHHHTCSEEECCTTSTTCCCSSCEEEEECH------HHHHH
T ss_pred ceecCHHHHHHHHHHcCCeEEEEcCcccccc-----cccccccCceEEEecCcccccCCCceEEEEECH------HHHHH
Confidence 4578999999999999999999999964422 22233 679999999999887665 8999887 45554
Q ss_pred Hhh------------c-c-CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 340 INN------------A-V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 340 i~~------------~-~-fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
+.. . . .....++++...++++..+++.+....+++..+++
T Consensus 207 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 260 (353)
T 2yrr_A 207 FTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRA 260 (353)
T ss_dssp CCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred hccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 431 0 0 01123466777777777777765433344443333
No 39
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.82 E-value=7.7e-20 Score=176.89 Aligned_cols=231 Identities=16% Similarity=0.093 Sum_probs=152.6
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+++.++...+++.|++++.+.+. + + + + .........+++++++++|. ..++...+.+.+|++|+..+
T Consensus 6 ~~~~~gp~~~~~~v~~a~~~~~~------~---~-~-~-~~~~~~~~~l~~~la~~~g~-~~~~~~v~~~~g~t~a~~~~ 72 (366)
T 1m32_A 6 LLLTPGPLTTSRTVKEAMLFDSC------T---W-D-D-DYNIGVVEQIRQQLTALATA-SEGYTSVLLQGSGSYAVEAV 72 (366)
T ss_dssp EECSSSSCCCCHHHHHTTCCCCC------T---T-S-H-HHHTTTHHHHHHHHHHHHCS-SSSEEEEEEESCHHHHHHHH
T ss_pred ccccCCCcCCCHHHHHHHhhhhc------C---C-C-H-HHHHHHHHHHHHHHHHHhCC-CCcCcEEEEecChHHHHHHH
Confidence 56666667789999999875321 1 1 1 1 11101222356678899993 22111245566778899999
Q ss_pred HHHhccCCCEEeecC-CCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-CCcEEEEcCCCC
Q 016668 185 YTAILKPHDRIMGLD-LPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGASAY 262 (385)
Q Consensus 185 ~~all~pGD~Vl~~~-~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-~pklIi~~~s~~ 262 (385)
+.++++|||+|++.+ +.|++... ..+...|..+..++ ++ +++.+|++++++.+++. ++++|++..+++
T Consensus 73 ~~~~~~~gd~vi~~~~~~~~~~~~-------~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~~~~~~~v~~~~~~n 142 (366)
T 1m32_A 73 LGSALGPQDKVLIVSNGAYGARMV-------EMAGLMGIAHHAYD--CG-EVARPDVQAIDAILNADPTISHIAMVHSET 142 (366)
T ss_dssp HHHSCCTTCCEEEEESSHHHHHHH-------HHHHHHTCCEEEEE--CC-TTSCCCHHHHHHHHHHCTTCCEEEEESEET
T ss_pred HHHhcCCCCeEEEEeCCCccHHHH-------HHHHHhCCceEEEe--CC-CCCCCCHHHHHHHHhcCCCeEEEEEecccC
Confidence 999999999988765 33322110 12234565555555 44 35679999999999764 578887766555
Q ss_pred --CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHH
Q 016668 263 --PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELE 337 (385)
Q Consensus 263 --~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~ 337 (385)
|...|+++|.++|+++|+++++|++|+.|.. +..+. +.|++++|+||++.||.| |++++++ ++.
T Consensus 143 ptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~------~~~ 211 (366)
T 1m32_A 143 TTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGI-----PMDIAALHIDYLISSANKCIQGVPGFAFVIARE------QKL 211 (366)
T ss_dssp TTTEECCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEH------HHH
T ss_pred CcceecCHHHHHHHHHHcCCEEEEECCccccCc-----CccccccCccEEEecCcccccCCCceEEEEECH------HHH
Confidence 5678999999999999999999999975532 22233 589999999999978766 9999987 455
Q ss_pred HHHhhccCC----------------C-ccCCChHHHHHHHHHHHHHhhC
Q 016668 338 SAINNAVFP----------------G-LQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 338 ~~i~~~~fp----------------~-~qg~p~~~~iaala~Al~e~~~ 369 (385)
+++.....+ + ..++++...++++..+++.+..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 260 (366)
T 1m32_A 212 AACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAK 260 (366)
T ss_dssp TTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 544321100 1 1235677777777778876544
No 40
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.82 E-value=1.4e-19 Score=176.54 Aligned_cols=233 Identities=15% Similarity=0.180 Sum_probs=154.6
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all 189 (385)
+...+++.|++++...+.+.+ ++++..|..+.. .......+++++++++|++.+ ..+.+.+|+.|+..++.++.
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~l~ 81 (382)
T 4eb5_A 8 SAKPVDERILEAMLPYMTESF--GNPSSVHSYGFK-AREAVQEAREKVAKLVNGGGG---TVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSC--CCTTCSSHHHHH-HHHHHHHHHHHHHHHHTCTTE---EEEEESSHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhcc--CCCCCCcHHHHH-HHHHHHHHHHHHHHHhCCCCC---eEEEcCchHHHHHHHHHHHH
Confidence 445789999999998876533 344433332222 223444577889999999753 23455667889999999987
Q ss_pred ----cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--C
Q 016668 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (385)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~ 263 (385)
+|||+|+++++.|.++... ...+...|..+..++ ++ +++.+|+++|++.+++ ++|+|++..+++ |
T Consensus 82 ~~~~~~gd~Vl~~~~~~~~~~~~-----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG 152 (382)
T 4eb5_A 82 MRNARKGKHILVSAVEHMSVINP-----AKFLQKQGFEVEYIP--VG-KYGEVDVSFIDQKLRD-DTILVSVQHANNEIG 152 (382)
T ss_dssp HHHGGGCCEEEEETTCCHHHHHH-----HHHHTTTTCEEEEEC--BC-TTSCBCHHHHHHHCCT-TEEEEECCSBCTTTC
T ss_pred hhccCCCCEEEECCCcchHHHHH-----HHHHHhCCcEEEEec--cC-CCCccCHHHHHHHhcC-CCeEEEEeccCCCcc
Confidence 8999999999876543211 011123566544444 55 3578999999999865 689888877665 4
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHH
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i 340 (385)
...|+++|.++|+++|++ ++|++|..|.. +..+. +.|++++|+||+ .||.| |+++++++. .+...+
T Consensus 153 ~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~-----~~~~~~~~~di~~~s~sK~-~g~~g~G~~~~~~~~----~l~~~~ 221 (382)
T 4eb5_A 153 TIQPVEEISEVLAGKAAL-HIDATASVGQI-----EVDVEKIGADMLTISSNDI-YGPKGVGALWIRKEA----KLQPVI 221 (382)
T ss_dssp BBCCHHHHHHHHTTSSEE-EEECTTTBTTB-----CCCHHHHTCSEEEEETGGG-TCCSSCEEEEEETTC----CCCCSS
T ss_pred ccCCHHHHHHHHHHCCCE-EEEcchhcCCc-----ccCccccCCCEEEeehHHh-cCCCceEEEEEcccc----ccCcee
Confidence 678999999999999999 99999975422 11222 679999999997 56764 888888751 011000
Q ss_pred hhc--cCCCccCCChHHHHHHHHHHHHHhh
Q 016668 341 NNA--VFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 341 ~~~--~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
... ......++++...++++..+++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 251 (382)
T 4eb5_A 222 LGGGQENGLRSGSENVPSIVGFGKAAEITA 251 (382)
T ss_dssp CSSCTGGGTSCSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCccccccCCCccHHHHHHHHHHHHHHH
Confidence 000 0001234566777777777776543
No 41
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.82 E-value=4.3e-20 Score=179.75 Aligned_cols=230 Identities=11% Similarity=-0.001 Sum_probs=150.3
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCC--CCCCCCCcHHHHHHHHHHHHH-HHHHcCCCCCCCcceeecCCcHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLP--GKRYYGGNEYIDELETLCQKR-ALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p--~~r~~~G~~~~~~le~~~~~~-la~lfg~~~~~~~~~V~~~sGs~A~~~a~ 185 (385)
.+...+++.|++++...+......++. ....+... .....++++ +++++|.+ . .+.+++|+.|+..++
T Consensus 16 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~la~~~~~~-~----v~~~~g~t~a~~~~~ 86 (371)
T 2e7j_A 16 QTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKT----PPIHDFIHNQLPKFLGCD-V----ARVTNGAREAKFAVM 86 (371)
T ss_dssp HHTCCCCHHHHHHHHHC------------------------CCHHHHHHTHHHHHTTSS-E----EEEESSHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHH----HHHHHHHHHHHHHHcCCC-E----EEEeCChHHHHHHHH
Confidence 446778999999998776543211111 00001111 122235568 89999987 2 244445578999999
Q ss_pred HHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh----cCCcEEEEcCCC
Q 016668 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL----FRPKLIIAGASA 261 (385)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~----~~pklIi~~~s~ 261 (385)
.++++|||+|++.++.|.++.. .+...|..+..++++++ +++.+|+++|++.++. .++++|++..++
T Consensus 87 ~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~ 157 (371)
T 2e7j_A 87 HSLAKKDAWVVMDENCHYSSYV--------AAERAGLNIALVPKTDY-PDYAITPENFAQTIEETKKRGEVVLALITYPD 157 (371)
T ss_dssp HHHCCTTCEEEEETTCCHHHHH--------HHHHTTCEEEEECCCCT-TTCCCCHHHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHhCCCCEEEEccCcchHHHH--------HHHHcCCeEEEeecccC-CCCCcCHHHHHHHHHhhcccCCeEEEEEECCC
Confidence 9999999999999987654421 24456765555542244 3478999999999863 368898887766
Q ss_pred C--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccc-cEEEEEEeCCCCchhHH
Q 016668 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVEL 336 (385)
Q Consensus 262 ~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gp-rgG~I~~~~~~~~~~~~ 336 (385)
+ |...|+++|.++|+++|+++++|++|+.|.. +..+. +.|++++|+||++.+| ++|+++++++ +
T Consensus 158 nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~------~ 226 (371)
T 2e7j_A 158 GNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRM-----PVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEE------W 226 (371)
T ss_dssp TTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTB-----CCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTT------T
T ss_pred CCCcccCCHHHHHHHHHHcCCeEEEECccccCCC-----CCChhhcCCCEEEecCCcCCCCCCCcEEEEEech------h
Confidence 5 4678999999999999999999999976532 11122 6799999999998665 6699999884 4
Q ss_pred HHH-HhhccCCCc------cCCChHHHHHHHHHHHHHh
Q 016668 337 ESA-INNAVFPGL------QGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 337 ~~~-i~~~~fp~~------qg~p~~~~iaala~Al~e~ 367 (385)
.++ +......+. .++++...++++..+++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 264 (371)
T 2e7j_A 227 AEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHV 264 (371)
T ss_dssp TTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHH
T ss_pred hhhhccccccCcccccccccCCcCHHHHHHHHHHHHHH
Confidence 344 433222111 3456666777776777654
No 42
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.82 E-value=3.1e-19 Score=177.32 Aligned_cols=236 Identities=14% Similarity=0.118 Sum_probs=159.0
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
++++..+++.++..+.+... ....++|...++. +++.+.+++...+.+. ..+|+.. .|. .++++.+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~l~~~la~~~ 75 (411)
T 2o0r_A 4 VSRLRPYATTVFAEMSALAT-RIGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VNQYPPG---PGS---APLRRAIAAQR 75 (411)
T ss_dssp CGGGGGGSSCHHHHHHHHHH-TTTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CCSCCCT---TCC---HHHHHHHHHHH
T ss_pred hhHhHhcCccHHHHHHHHhh-cCCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CCC---HHHHHHHHHHH
Confidence 45666777777766654322 2244666544433 5799999998887542 2244431 233 37888888888
Q ss_pred HHHcCCCCCCCc-ceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC--
Q 016668 158 LAAFNLDENKWG-VNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-- 234 (385)
Q Consensus 158 a~lfg~~~~~~~-~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-- 234 (385)
.+.+|.+.+ .. ..+.+.+|++|+..++.++++|||+|++.++.|.++.. .+...|..+..++ ++++
T Consensus 76 ~~~~g~~~~-~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~--~~~~~~ 144 (411)
T 2o0r_A 76 RRHFGVDYD-PETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSP--------VVAMAGAHRVTVP--LVPDGR 144 (411)
T ss_dssp HHHHCCCCC-TTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CEEETT
T ss_pred HHHcCCCCC-CCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCEEEEee--cccccc
Confidence 888886421 10 12444556779999999999999999999987765421 3345676555555 4322
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCC---C---C
Q 016668 235 TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---F---K 303 (385)
Q Consensus 235 ~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p---~---~ 303 (385)
++.+|+++|++.++. ++++|+++.+++| ...+ +++|.++|+++|++||+|++|.. +...|..+.+ + .
T Consensus 145 ~~~~d~~~l~~~l~~-~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~ 222 (411)
T 2o0r_A 145 GFALDADALRRAVTP-RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEH-LVFDHARHLPLAGFDGMA 222 (411)
T ss_dssp EEECCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCTTCCCCCGGGSTTTG
T ss_pred CCCCCHHHHHHhhcc-CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCcChhhccCCC
Confidence 346999999999864 7899888776655 4444 58999999999999999999854 3333321111 2 1
Q ss_pred CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 304 YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 304 gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+.|++++|+||++ +|.|.|++++++ ++.+.+..
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~ 257 (411)
T 2o0r_A 223 ERTITISSAAKMFNCTGWKIGWACGPA------ELIAGVRA 257 (411)
T ss_dssp GGEEEEEEHHHHTTCTTTCEEEEECCH------HHHHHHHH
T ss_pred CCEEEEeechhhcCCccceEEEEeeCH------HHHHHHHH
Confidence 4689999999998 567889999976 56666544
No 43
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.82 E-value=5.2e-20 Score=182.42 Aligned_cols=204 Identities=9% Similarity=0.082 Sum_probs=147.4
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH-HHHcC-CCCCCCcceeecCCcHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA-LAAFN-LDENKWGVNVQPLSGSPANF 182 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l-a~lfg-~~~~~~~~~V~~~sGs~A~~ 182 (385)
|.+..++-.+++.+++++...+.+.. +....+..+++|+ .+ ++++| .++ .|.++|||.|+.
T Consensus 5 i~~~~p~~~~~~~i~~a~~~~~~~~~--------~~~~~~~~~~l~~----~~~a~~~g~~~~-----~v~~~sgt~al~ 67 (377)
T 3ju7_A 5 IPFLRASTVPVIEYLDELKEIDASHI--------YTNYGPINQRFEQ----TIMSGFFQNRGA-----VTTVANATLGLM 67 (377)
T ss_dssp BCSCCCCCCCGGGGHHHHHHHHHHTC--------CSSSCHHHHHHHH----HHHHHTSTTCSE-----EEEESCHHHHHH
T ss_pred eeccCCCCCCcHHHHHHHHHHHHcCC--------cccCCHHHHHHHH----HHHHHHhCCCCe-----EEEeCCHHHHHH
Confidence 55656677778888999887775432 1111244556665 57 88999 443 477899999999
Q ss_pred HHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcC--CcEEEEcC
Q 016668 183 EVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR--PKLIIAGA 259 (385)
Q Consensus 183 ~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~--pklIi~~~ 259 (385)
.++.++ ++|||+|+++++.|.++.. .+...|..+. .++++++++.+|++++++.+...+ +|+|+..+
T Consensus 68 ~al~~l~~~~Gd~Vi~~~~~~~~~~~--------~~~~~G~~~~--~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~~ 137 (377)
T 3ju7_A 68 AAIQLKKRKKGKYALMPSFTFPATPL--------AAIWCGLEPY--FIDISIDDWYMDKTVLWDKIEELKEEVAIVVPYA 137 (377)
T ss_dssp HHHHHHSCTTCCEEEEESSSCTHHHH--------HHHHTTCEEE--EECBCTTTCSBCHHHHHHHHHHHGGGEEEECCBC
T ss_pred HHHHHcCCCCcCEEEECCCCcHHHHH--------HHHHcCCEEE--EEecCCccCCcCHHHHHHHHhcCCCCceEEEEEC
Confidence 999998 9999999999987755421 3446676544 444665678999999999883335 88887543
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC-C-CCcEEEEC--CCccCccccEEEEEEeCCCCchhH
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K-YCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~-~-gaDiv~~S--~hK~l~GprgG~I~~~~~~~~~~~ 335 (385)
.++...|+++|.++|+ +|++|++|++|+.|....+. ++ . .+|+.++| .||++.++.||+++++++ +
T Consensus 138 -~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~---~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~-----~ 207 (377)
T 3ju7_A 138 -TFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGM---HYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNE-----E 207 (377)
T ss_dssp -GGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTE---ETTTTCSSEEEEECBTTSSSCCBSCEEEEESCH-----H
T ss_pred -CCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCE---eccCCCCcEEEEECCCCCcCCCCCcEEEEECCH-----H
Confidence 3577889999999999 99999999999877654332 22 1 35766655 579998788999999876 6
Q ss_pred HHHHHhhccC
Q 016668 336 LESAINNAVF 345 (385)
Q Consensus 336 ~~~~i~~~~f 345 (385)
+.+++.....
T Consensus 208 l~~~~~~~~~ 217 (377)
T 3ju7_A 208 DIQRIKRMGN 217 (377)
T ss_dssp HHHHHHHHTB
T ss_pred HHHHHHHHHh
Confidence 7777665433
No 44
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.82 E-value=2.1e-19 Score=176.13 Aligned_cols=236 Identities=13% Similarity=0.126 Sum_probs=159.3
Q ss_pred hccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCCcH
Q 016668 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (385)
Q Consensus 103 ~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~sGs 178 (385)
.-+++...++ .+++.|.+++...+.+. ..+|+. +. .++++.+++++++++| ++.+ ..+.+++|+
T Consensus 33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~~---~~~~~~l~~~l~~~~g~~~~~~---~v~~~~g~~ 100 (391)
T 4dq6_A 33 DLLPMWVADMDFKAAPCIIDSLKNRLEQE-IYGYTT-----RP---DSYNESIVNWLYRRHNWKIKSE---WLIYSPGVI 100 (391)
T ss_dssp CSEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCBC-----CC---HHHHHHHHHHHHHHHCCCCCGG---GEEEESCHH
T ss_pred CceeccccCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----CC---HHHHHHHHHHHHHHhCCCCcHH---HeEEcCChH
Confidence 3355554444 45799999998877542 222322 22 3677778889999999 4443 234455667
Q ss_pred HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecc-ccCCCCCCCHHHHHHHhhhcCCcEEEE
Q 016668 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR-LDESTGLVDYDMLEKTAILFRPKLIIA 257 (385)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~-~~~~~~~iD~d~le~~i~~~~pklIi~ 257 (385)
+|+..++.++++|||+|++.++.|.++.. .+...|..+..++++ .++.++.+|++++++.+++ +++|++
T Consensus 101 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i 170 (391)
T 4dq6_A 101 PAISLLINELTKANDKIMIQEPVYSPFNS--------VVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFIL 170 (391)
T ss_dssp HHHHHHHHHHSCTTCEEEECSSCCTHHHH--------HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCHHHHH--------HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEE
Confidence 79999999999999999999987655421 234566654444432 1122346999999999965 888888
Q ss_pred cCCCCC--CC---CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCc-----EEEECCCccC--ccccEEE
Q 016668 258 GASAYP--RD---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD-----VVTTTTHKSL--RGPRGGM 323 (385)
Q Consensus 258 ~~s~~~--~~---~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaD-----iv~~S~hK~l--~GprgG~ 323 (385)
..+++| .. .++++|+++|+++|+++|+|++|. ++...|..+.++. ..| +++.|+||++ +|.+.|+
T Consensus 171 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~ 249 (391)
T 4dq6_A 171 CNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHS-DIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSY 249 (391)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEE
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeecccc-ccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEE
Confidence 777665 33 358899999999999999999984 4444443222332 222 7899999997 6778899
Q ss_pred EEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++++++ ++.+.+.........++++....++...++++
T Consensus 250 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (391)
T 4dq6_A 250 VVLPDE-----KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN 287 (391)
T ss_dssp EECCSH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEeCCH-----HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc
Confidence 998874 56666655433333445666666666667765
No 45
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.82 E-value=2.7e-19 Score=176.51 Aligned_cols=235 Identities=15% Similarity=0.165 Sum_probs=156.8
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCCcHH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGSP 179 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~sGs~ 179 (385)
-+++..+++ .+++.|.+++...+.+. ..+|+. + ..++++.+.+++.+.+| ++.+ ..+.+.+|++
T Consensus 33 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~---~v~~t~g~~~ 100 (399)
T 1c7n_A 33 VVPLSVADMEFKNPPELIEGLKKYLDET-VLGYTG-----P---TEEYKKTVKKWMKDRHQWDIQTD---WIINTAGVVP 100 (399)
T ss_dssp CCCCCSSSCSSCCCHHHHHHHHHHHHHC-CCSSBC-----C---CHHHHHHHHHHHHHHHCCCCCGG---GEEEESSHHH
T ss_pred ceeeeecCCCCCCCHHHHHHHHHHHhcC-CCCCCC-----C---cHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHHH
Confidence 355554444 35899999998877532 223332 2 34788878888888888 4442 2344455577
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC--CCCCHHHHHHHhhhcCCcEEEE
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST--GLVDYDMLEKTAILFRPKLIIA 257 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~--~~iD~d~le~~i~~~~pklIi~ 257 (385)
|+..++.++++|||+|++.+|.|.++.. .+...|..+. .+++++++ +.+|+++|++.++..++++|++
T Consensus 101 a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~--~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 101 AVFNAVREFTKPGDGVIIITPVYYPFFM--------AIKNQERKII--ECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp HHHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHTTTCEEE--ECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEE--ecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 9999999999999999999987655421 2345566444 44443122 3599999999997447899888
Q ss_pred cCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-------CCcEEEECCCccC--ccccEEE
Q 016668 258 GASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGGM 323 (385)
Q Consensus 258 ~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-------gaDiv~~S~hK~l--~GprgG~ 323 (385)
..+++| ...+ +++|+++|+++|++||+|++|.. +...+..+.++. ..++++.|+||++ +|.|.|+
T Consensus 171 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 249 (399)
T 1c7n_A 171 CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFD-LIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSN 249 (399)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTT-CBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEE
T ss_pred cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEE
Confidence 777665 4566 89999999999999999999853 333332222221 2347899999997 6778899
Q ss_pred EEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++++++ ++.+.+.....+...++++....++...++++
T Consensus 250 ~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~ 287 (399)
T 1c7n_A 250 IIIKNP-----DIRERFTKSRDATSGMPFTTLGYKACEICYKE 287 (399)
T ss_dssp EECCCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCH-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhC
Confidence 998753 57776655433333334555555555666654
No 46
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.82 E-value=4.4e-19 Score=182.28 Aligned_cols=249 Identities=12% Similarity=0.016 Sum_probs=165.8
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--CCCCcceeecCCcHHHHHHHHHHh
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~--~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
..++++.+.+++.+.+...+. ++ ...+...++|+.+++++++++|++ .++....+.+++|++||+.++.++
T Consensus 65 t~~~~~~v~~~l~~~~~~~~~--~~-----~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~ 137 (502)
T 3hbx_A 65 TTWMEPECDKLIMSSINKNYV--DM-----DEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAF 137 (502)
T ss_dssp CCCCCHHHHHHHHHTTTCBTT--CT-----TTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhccCCC--Ch-----hcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHH
Confidence 356789999999877654332 11 233456789999999999999998 332223345678889999998888
Q ss_pred ccC--------CC-----EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEE
Q 016668 189 LKP--------HD-----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLI 255 (385)
Q Consensus 189 l~p--------GD-----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklI 255 (385)
.++ || +|++.++.|. ++. +.+...|..+..++ ++++++.+|+++|++.+++ +|++|
T Consensus 138 ~~~~~~~~~~~G~~~~~~~vi~~~~~h~---s~~-----~~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~t~~v 206 (502)
T 3hbx_A 138 KRKWQNKRKAEGKPVDKPNIVTGANVQV---CWE-----KFARYFEVELKEVK--LSEGYYVMDPQQAVDMVDE-NTICV 206 (502)
T ss_dssp HHHHHHHHHHTTCCCSCCEEEEETTCCH---HHH-----HHHHHTTCEEEEEC--CBTTBCSCCHHHHHHHCCT-TEEEE
T ss_pred HHHHhHHHHhcCCCCCCcEEEEcCCchH---HHH-----HHHHHcCceeEEEe--cCCCcCcCCHHHHHHHHhh-CCEEE
Confidence 665 87 8988876543 321 23456777655555 5544589999999999975 68888
Q ss_pred EEcCCC--CCCCCCHHHHHHHHHHc------CcEEEEecccccccc--ccCcccCCC--CCCcEEEECCCccCccccE-E
Q 016668 256 IAGASA--YPRDFDYPRMRQIADAV------GALLMMDMAHISGLV--AASVVADPF--KYCDVVTTTTHKSLRGPRG-G 322 (385)
Q Consensus 256 i~~~s~--~~~~~dl~~I~~ia~~~------ga~livD~ah~~Gli--~~g~~~~p~--~gaDiv~~S~hK~l~Gprg-G 322 (385)
++..++ +|...|+++|.++|+++ |+++++|+||+.+.. ..+..+..+ .++|++++++||++.+|.| |
T Consensus 207 ~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G 286 (502)
T 3hbx_A 207 AAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIG 286 (502)
T ss_dssp EEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCE
T ss_pred EEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeE
Confidence 765544 46778999999999999 999999999964432 122222223 3899999999999867654 8
Q ss_pred EEEEeCCCCchhHHH-HHHhhc-cC-------CCccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 323 MIFFKKDPVLGVELE-SAINNA-VF-------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~-~~i~~~-~f-------p~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
+++++++ ++. +.+... .+ ..+.++.....++++..+++.+..++|.++.++..++
T Consensus 287 ~~~~~~~-----~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~ 350 (502)
T 3hbx_A 287 WVIWRNK-----EDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCREN 350 (502)
T ss_dssp EEEESSG-----GGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCH-----HHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7877764 221 111110 11 1122344444566777777766556666666655543
No 47
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.82 E-value=6.8e-19 Score=170.60 Aligned_cols=225 Identities=10% Similarity=0.023 Sum_probs=155.5
Q ss_pred ccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 104 ~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
-++|..++|. +++.|++++...+.+ ..+||. ....+ .++++++++|++.+ ..+.+.+|++|+
T Consensus 18 ~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~-------~~~~~----l~~~la~~~~~~~~---~i~~~~g~~~a~ 81 (354)
T 3ly1_A 18 PIRINFNENPLGMSPKAQAAARDAVVK--ANRYAK-------NEILM----LGNKLAAHHQVEAP---SILLTAGSSEGI 81 (354)
T ss_dssp CEECSSCCCSSCCCHHHHHHHHHTGGG--TTSCCH-------HHHHH----HHHHHHHHTTSCGG---GEEEESHHHHHH
T ss_pred eEEccCCCCCCCCCHHHHHHHHHHHhh--CcCCCC-------CchHH----HHHHHHHHhCCChH---HEEEeCChHHHH
Confidence 3555555554 689999999877653 223332 22223 45678899998764 134445566799
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh-cCCcEEEEcCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-FRPKLIIAGAS 260 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~-~~pklIi~~~s 260 (385)
..++.++++|||+|++.++.|.++.. .+...|..+..++ +++ ++.+|++++++.+++ .++|+|++..+
T Consensus 82 ~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~-~~~~d~~~l~~~l~~~~~~~~v~l~~p 150 (354)
T 3ly1_A 82 RAAIEAYASLEAQLVIPELTYGDGEH--------FAKIAGMKVTKVK--MLD-NWAFDIEGLKAAVAAYSGPSIVYLVNP 150 (354)
T ss_dssp HHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--CCT-TSCCCHHHHHHHHHTCSSCEEEEEESS
T ss_pred HHHHHHHhCCCCeEEECCCCchHHHH--------HHHHcCCEEEEec--CCC-CCCCCHHHHHHHhccCCCCCEEEEeCC
Confidence 99999999999999999987655421 3345666544444 543 478999999999974 47999988777
Q ss_pred CCC--CCCCHHHHHHHHHH--cCcEEEEeccccccccccCcccCCCC------CCcEEEECCCccC--ccccEEEEEEeC
Q 016668 261 AYP--RDFDYPRMRQIADA--VGALLMMDMAHISGLVAASVVADPFK------YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 261 ~~~--~~~dl~~I~~ia~~--~ga~livD~ah~~Gli~~g~~~~p~~------gaDiv~~S~hK~l--~GprgG~I~~~~ 328 (385)
++| ...+.+++.++++. +|+++++|++|. ++...+..+..+. +.+++++|+||++ +|.|.|++++++
T Consensus 151 ~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 229 (354)
T 3ly1_A 151 NNPTGTITPADVIEPWIASKPANTMFIVDEAYA-EFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP 229 (354)
T ss_dssp CTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTG-GGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH
T ss_pred CCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHH-HhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH
Confidence 765 57788888888887 999999999985 4444443222221 2348899999997 577889999976
Q ss_pred CCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+.....+ .+++....+++..+++
T Consensus 230 ------~~~~~~~~~~~~---~~~~~~~~~a~~~~l~ 257 (354)
T 3ly1_A 230 ------TVIALMGRYVAG---EKINFSGVDAALASMN 257 (354)
T ss_dssp ------HHHHHHGGGTTC---SCCCHHHHHHHHHHTT
T ss_pred ------HHHHHHHHhcCC---CCCCHHHHHHHHHHhc
Confidence 688888766544 3556666666666654
No 48
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.82 E-value=2.5e-19 Score=175.50 Aligned_cols=254 Identities=13% Similarity=0.098 Sum_probs=162.0
Q ss_pred cCCh-HHHHHHHHHHHHh-h---hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 85 EADP-EVCEIITKEKERQ-F---KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 85 ~~dp-~~~~~i~~e~~~~-~---~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
++++ +.+..+.+...+. . .-+++..+++. +++.+.+++...+.+....+|+. .....++++...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~~~~~l~~~ia~~~ 76 (376)
T 2dou_A 3 RVPEPSVFLVVDEAKRKARERGVGLIDLSIGSTDLPPPEAPLKALAEALNDPTTYGYCL------KSCTLPFLEEAARWY 76 (376)
T ss_dssp -CCCTHHHHHHHHHHHHHHHTTCCCEECSSCCCCCCCCHHHHHHHHHHTTCGGGSSCCC------HHHHHHHHHHHHHHH
T ss_pred cCCccchHHHHHHHHHHhhccCCCEEeccCCCCCCCCCHHHHHHHHHHHhCCCcCCCCC------CCCCHHHHHHHHHHH
Confidence 3455 6666665544433 1 23556555443 47999999987764321223322 233457887777788
Q ss_pred HHHcCCCCC-CCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 158 LAAFNLDEN-KWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 158 a~lfg~~~~-~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
.+.+|++.+ +. ..+.+++|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ + +++.
T Consensus 77 ~~~~g~~~~~~~-~v~~~~g~~~a~~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~-~~~~ 144 (376)
T 2dou_A 77 EGRYGVGLDPRR-EALALIGSQEGLAHLLLALTEPEDLLLLPEVAYPSYFG--------AARVASLRTFLIP--L-REDG 144 (376)
T ss_dssp HHHHSCCCCTTT-SEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHTTCEEEEEC--B-CTTS
T ss_pred HHHhCCCCCCCc-cEEEcCCcHHHHHHHHHHhcCCCCEEEECCCCcHhHHH--------HHHHcCCEEEEee--C-CCCC
Confidence 787898621 10 12344455679999999999999999999987655321 2345566554444 4 3345
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-----CCc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD 306 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-----gaD 306 (385)
.+|++++++.++. ++|+|++..+++| ...+ +++|.++|+++|+++|+|++|. ++...+..++.+. +.+
T Consensus 145 ~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~ 222 (376)
T 2dou_A 145 LADLKAVPEGVWR-EAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYV-DQVYEGEAPSPLALPGAKERV 222 (376)
T ss_dssp SBCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGBSSSCCCCGGGSTTGGGTE
T ss_pred CCCHHHHHHhhcc-CceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccch-hcccCCCCCChhhcCCCCCcE
Confidence 6899999988864 6899988766665 4444 6789999999999999999985 3333332222222 345
Q ss_pred EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 307 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+++.|+||+| +|.|.|++++++ ++.+.+......... +++....++...+++
T Consensus 223 i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~ 276 (376)
T 2dou_A 223 VELFSLSKSYNLAGFRLGFALGSE------EALARLERVKGVIDF-NQYAGVLRMGVEALK 276 (376)
T ss_dssp EEEEEHHHHHTCGGGCCEEEEECH------HHHHHHHHHHHHHCC-CSCHHHHHHHHHHHT
T ss_pred EEEecchhhcCChhheeEEEecCH------HHHHHHHHHHHhccc-CCCHHHHHHHHHHHh
Confidence 8899999997 577889999877 576766543322222 234444555555564
No 49
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.82 E-value=4.8e-19 Score=173.78 Aligned_cols=253 Identities=17% Similarity=0.118 Sum_probs=161.3
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRA 157 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~l 157 (385)
+++++.+.+..+..+.+.... ...+++..+++ .+++.+.+++...+.+ ...|+.. .|.+ +++ +.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~---~~~~---~l~----~~l 70 (381)
T 1v2d_A 4 HPRTEAAKESIFPRMSGLAQR-LGAVNLGQGFPSNPPPPFLLEAVRRALGR--QDQYAPP---AGLP---ALR----EAL 70 (381)
T ss_dssp CGGGGGC---CHHHHHHHHHH-HTCEECCCCSCSSCCCHHHHHHHHHHTTT--SCSCCCT---TCCH---HHH----HHH
T ss_pred hhhhhhcCccHHHHHHHHHhc-CCeEEecCCCCCCCCCHHHHHHHHHHHHH--hcCCCCC---CCCH---HHH----HHH
Confidence 455666666666555543332 34466654443 3579999999877653 2234331 1222 444 457
Q ss_pred HHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc--CCC
Q 016668 158 LAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD--EST 235 (385)
Q Consensus 158 a~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~--~~~ 235 (385)
++++|++.+ ..+.+.+|++|+..++.++++|||+|++.++.|.++.. .+...|..+..++ .+ +++
T Consensus 71 a~~~~~~~~---~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~ 137 (381)
T 1v2d_A 71 AEEFAVEPE---SVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLP--------DAFLAGAKARLVR--LDLTPEG 137 (381)
T ss_dssp HHHHTSCGG---GEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CEEETTE
T ss_pred HHhcCCChh---hEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--CCCCCcc
Confidence 778998764 23455667789999999999999999999987755421 2345676555554 43 334
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCCcE
Q 016668 236 GLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDV 307 (385)
Q Consensus 236 ~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~gaDi 307 (385)
+.+|++++++.++. ++++|++..+++| ...+ +++|.++|+++|+++|+|++|.. +..+....+.. .+.|+
T Consensus 138 ~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~g~~~~~~~~~~~~~~~ 215 (381)
T 1v2d_A 138 FRLDLSALEKALTP-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDE-LYYGERPRRLREFAPERTF 215 (381)
T ss_dssp EECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBSSSCCCCHHHHCTTTEE
T ss_pred CCcCHHHHHHhcCc-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccc-cccCCCCCCHHHhcCCCEE
Confidence 67999999998864 6898888776665 4444 89999999999999999999853 33211111111 26789
Q ss_pred EEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 308 VTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 308 v~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
++.|+||++ +|+|.|+++++++ +.+.+....... ..+++....+++..+|+..
T Consensus 216 ~~~s~sK~~~~~G~r~G~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~ 270 (381)
T 1v2d_A 216 TVGSAGKRLEATGYRVGWIVGPKE------FMPRLAGMRQWT-SFSAPTPLQAGVAEALKLA 270 (381)
T ss_dssp EEEEHHHHTTCGGGCCEEEECCTT------THHHHHHHHHHH-TSSCCHHHHHHHHHHHHHH
T ss_pred EEeechhhcCCcccceEEEEeCHH------HHHHHHHHHhhc-ccCCCcHHHHHHHHHHhCc
Confidence 999999987 5778899999874 444443321111 1133445555666677644
No 50
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.81 E-value=1.4e-19 Score=180.48 Aligned_cols=237 Identities=15% Similarity=0.162 Sum_probs=145.4
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL- 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all- 189 (385)
...+++.|++++...+.+. .+||...|..+... .++.+.+++++++++|++.+ ..+++++|++|+..++.+++
T Consensus 27 ~~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~~ 100 (432)
T 3a9z_A 27 TTPLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKA-KDIINTARASLAKMIGGKPQ---DIIFTSGGTESNNLVIHSTVR 100 (432)
T ss_dssp CCCCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHH-HHHHHHHHHHHHHHHTCCGG---GEEEESCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHh--cCCCccCcHHHHHH-HHHHHHHHHHHHHHcCCCcC---eEEEeCChHHHHHHHHHHHHh
Confidence 3467999999999887653 25666444323222 23444578899999999753 12444455789999998886
Q ss_pred -------cCCCEEeecCCCCCccc-------cCCccc-cccc-cccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCc
Q 016668 190 -------KPHDRIMGLDLPHGGHL-------SHGFMT-PKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (385)
Q Consensus 190 -------~pGD~Vl~~~~~~ggh~-------s~~~~~-~~~~-~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pk 253 (385)
+|||+|++.+|.+.++. .|.... .+.. ....|..+..++ ++++++.+|+++|++.+++ +++
T Consensus 101 ~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~--~~~~~~~~d~~~l~~~i~~-~~~ 177 (432)
T 3a9z_A 101 CFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVP--VSKVNGQVEVEDILAAVRP-TTC 177 (432)
T ss_dssp HHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEEC--CCTTTSSCCHHHHHHTCCT-TEE
T ss_pred hhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEe--cCcccCCcCHHHHHHhccC-Cce
Confidence 59999999988765431 111100 0001 123465554444 5543578999999999865 689
Q ss_pred EEEEcCCCC--CCCCCHHHHHHHHHHcC----------cEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccc
Q 016668 254 LIIAGASAY--PRDFDYPRMRQIADAVG----------ALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGP 319 (385)
Q Consensus 254 lIi~~~s~~--~~~~dl~~I~~ia~~~g----------a~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gp 319 (385)
+|+++.+++ |...|+++|.++|+++| +++++|++|+.|.. +..+. +.|++++|+||++ ||
T Consensus 178 ~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~ 251 (432)
T 3a9z_A 178 LVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKR-----RVDVEDLGVDFLTIVGHKFY-GP 251 (432)
T ss_dssp EEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTS-----CCCHHHHCCSEEEEEGGGTT-CC
T ss_pred EEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCc-----ccChhhcCCCEEEEehhHhc-CC
Confidence 998877765 46789999999999999 99999999965421 11222 6899999999986 79
Q ss_pred cEEEEEEeCCCCchhHHHHHHhhccC------CCccCCChHHHHHHHHHHHHHh
Q 016668 320 RGGMIFFKKDPVLGVELESAINNAVF------PGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 320 rgG~I~~~~~~~~~~~~~~~i~~~~f------p~~qg~p~~~~iaala~Al~e~ 367 (385)
+.|+++++++. ....+....+ ....++++...++++..+++.+
T Consensus 252 ~~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~ 300 (432)
T 3a9z_A 252 RIGALYVRGVG-----KLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV 300 (432)
T ss_dssp SCEEEEETTBT-----TTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH
T ss_pred cceEEEEcccc-----ccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH
Confidence 99999998741 0111211100 0112456677777777777654
No 51
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.81 E-value=4e-19 Score=175.38 Aligned_cols=231 Identities=16% Similarity=0.189 Sum_probs=156.1
Q ss_pred cccccCCC--C-CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 105 LELIASEN--F-TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 105 l~Liasen--~-~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
+++..+++ + +++.+.+++...+.. +..++.+.++..|.. ++.+.+++++++++|.+. .+.+++|++|+
T Consensus 46 idl~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~g~~---~~~~~l~~~la~~~g~~~-----v~~~~ggt~a~ 116 (398)
T 3a2b_A 46 LMFGSNSYLGLTTDTRIIKAAQDALEK-YGTGCAGSRFLNGTL---DIHVELEEKLSAYVGKEA-----AILFSTGFQSN 116 (398)
T ss_dssp EECSCSCTTCGGGCHHHHHHHHHHHHH-HCSCCCSBTTTTCCC---HHHHHHHHHHHHHHTCSE-----EEEESSHHHHH
T ss_pred EEeecccccCCCCCHHHHHHHHHHHHH-cCCCCCCcCcccCCc---HHHHHHHHHHHHHhCCCc-----EEEECCHHHHH
Confidence 45544433 2 689999998877653 223343333333443 444556678999999853 46677888999
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc---CCcEEEEc
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF---RPKLIIAG 258 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~---~pklIi~~ 258 (385)
..++.++++|||+|++.+|.|+++.. .+...|..+..++ . +|++++++.+++. ++++|+++
T Consensus 117 ~~~~~~~~~~gd~V~~~~p~~~~~~~--------~~~~~g~~~~~v~--~------~d~~~l~~~l~~~~~~~~~~v~~~ 180 (398)
T 3a2b_A 117 LGPLSCLMGRNDYILLDERDHASIID--------GSRLSFSKVIKYG--H------NNMEDLRAKLSRLPEDSAKLICTD 180 (398)
T ss_dssp HHHHHHSSCTTCEEEEETTCCHHHHH--------HHHHSSSEEEEEC--T------TCHHHHHHHHHTSCSSSCEEEEEE
T ss_pred HHHHHHHhCCCCEEEECCccCHHHHH--------HHHHcCCceEEeC--C------CCHHHHHHHHHhhccCCceEEEEe
Confidence 99999999999999999987765432 3445676444333 2 6899999998754 68899888
Q ss_pred CCCCC--CCCCHHHHHHHHHHcCcEEEEecccccccccc-Cccc-C--CCC-CCcEEEECCCccCccccEEEEEEeCCCC
Q 016668 259 ASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAA-SVVA-D--PFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPV 331 (385)
Q Consensus 259 ~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~-g~~~-~--p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~ 331 (385)
++++| ...++++|.++|+++|+++++|++|..|.... +... . .+. ++|++++|+||++. |.||++++++
T Consensus 181 ~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~GG~~~~~~--- 256 (398)
T 3a2b_A 181 GIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLA-SLGGFVAGDA--- 256 (398)
T ss_dssp SBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTC-SSCEEEEECH---
T ss_pred CCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEeccccccc-CCCcEEEeCH---
Confidence 77654 57899999999999999999999996553311 1100 0 011 36899999999984 6779999876
Q ss_pred chhHHHHHHhhccC-CCccCCChHHHHHHHHHHHHHh
Q 016668 332 LGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 332 ~~~~~~~~i~~~~f-p~~qg~p~~~~iaala~Al~e~ 367 (385)
++.+.+..... ....+.++..+.++...+++..
T Consensus 257 ---~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~ 290 (398)
T 3a2b_A 257 ---DVIDFLKHNARSVMFSASMTPASVASTLKALEII 290 (398)
T ss_dssp ---HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhcccceecCCCCHHHHHHHHHHHHHH
Confidence 57676654321 1122345555665555666553
No 52
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.81 E-value=5e-19 Score=175.85 Aligned_cols=262 Identities=10% Similarity=0.033 Sum_probs=171.9
Q ss_pred hhhhcccCChHHHHHHHHHHHHhhhccccccCCC--CCcHHHHHHHhhHhhccC-CCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 79 VDYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNKY-SEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 79 ~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen--~~s~~V~~al~s~l~~~y-~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
+++++..+++..+..+.+... ...-++|-..++ .+++.|.+++...+.... ..+|+.. .|.+ ++++.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~---~g~~---~lr~~la~ 78 (422)
T 3fvs_A 6 QARRLDGIDYNPWVEFVKLAS-EHDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFMLNQYTKT---FGYP---PLTKILAS 78 (422)
T ss_dssp SCGGGTTCCCCHHHHHHHHHH-TSCCEECCCSSCSSCCCHHHHHHHHHHHHSCGGGGSCCCT---TCCH---HHHHHHHH
T ss_pred HHHHhhccCccHHHHHHHHhh-cCCceEeCCCCCCCCCCHHHHHHHHHHHhCCCccCCCCCC---CCCH---HHHHHHHH
Confidence 456777788776655544322 224455554433 478999999988776432 2344432 2333 67777788
Q ss_pred HHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC--
Q 016668 156 RALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-- 233 (385)
Q Consensus 156 ~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-- 233 (385)
++.+.+|.+.+.-...+.+.+|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ +++
T Consensus 79 ~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~~~~ 148 (422)
T 3fvs_A 79 FFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEP--------MTMMAGGRPVFVS--LKPGP 148 (422)
T ss_dssp HHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CBCCC
T ss_pred HHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHH--------HHHHcCCEEEEEe--ccccc
Confidence 8888888764210012444455679999999999999999999987655321 2345666555555 432
Q ss_pred ---------CCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 234 ---------STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 234 ---------~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
.++.+|++++++.+++ ++++|+++.++|| ... ++++|+++|+++|+++|+|++|. ++...+..+
T Consensus 149 ~~~G~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~ 226 (422)
T 3fvs_A 149 IQNGELGSSSNWQLDPMELAGKFTS-RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQ-WMVYDGHQH 226 (422)
T ss_dssp CCSSSCCBGGGSBCCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCC
T ss_pred ccccccccccCCCCCHHHHHhhcCC-CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccch-hhccCCCCC
Confidence 2346899999998865 7899888777765 445 58999999999999999999984 454444322
Q ss_pred CCCC------CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 300 DPFK------YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 300 ~p~~------gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
.++. +.++++.|+||++ +|+|.|++++++ ++.+.+......... +++....++++.+++.
T Consensus 227 ~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 227 ISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPD------HIMKHLRTVHQNSVF-HCPTQSQAAVAESFER 294 (422)
T ss_dssp CCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCH------HHHHHHHHHHHTTTC-CCCHHHHHHHHHHHHH
T ss_pred CChhhcccccCcEEEEecchhccCCccceEEEEEeCH------HHHHHHHHHHhhccC-CCCcHHHHHHHHHHhh
Confidence 2221 2337899999997 578889999887 566666543322222 3445555666667764
No 53
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.81 E-value=1.9e-18 Score=172.36 Aligned_cols=260 Identities=12% Similarity=0.056 Sum_probs=169.0
Q ss_pred hhhcccCChHHHHHHHHHHHHhhhccccccCCC--CCcHHHHHHHhhHhhcc--CCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQFKSLELIASEN--FTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen--~~s~~V~~al~s~l~~~--y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
++++...++.++..+.+... ...-++|...++ .+++.|.+++...+... ...+|+.. .|.. ++++.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~g~~---~l~~~la~ 88 (429)
T 1yiz_A 16 PKRYQGSTKSVWVEYIQLAA-QYKPLNLGQGFPDYHAPKYALNALAAAANSPDPLANQYTRG---FGHP---RLVQALSK 88 (429)
T ss_dssp SSSCCCCTTCHHHHHHHHHH-HHCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGGGSCCCS---SCCH---HHHHHHHH
T ss_pred hHHhhhCCchHHHHHHHHhc-cCCEEEecCCCCCCCCCHHHHHHHHHHHhccccCccCCCCC---CCcH---HHHHHHHH
Confidence 45566677777766655332 234466654433 35799999998877541 11234331 2333 67777788
Q ss_pred HHHHHcCCCCCCCc-ceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC
Q 016668 156 RALAAFNLDENKWG-VNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (385)
Q Consensus 156 ~la~lfg~~~~~~~-~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~ 234 (385)
++.+.+|.+.+ .. ..+.+.+|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++++
T Consensus 89 ~l~~~~g~~~~-~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~~ 157 (429)
T 1yiz_A 89 LYSQLVDRTIN-PMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP--------MVKAAGGIPRFIP--LKPN 157 (429)
T ss_dssp HHHHHHTSCCC-TTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CBCC
T ss_pred HHHHHhCCCCC-CcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--CCcc
Confidence 88888885421 11 12344455779999999999999999999987655321 2345566555444 4433
Q ss_pred ---------CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccCc-cc
Q 016668 235 ---------TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VA 299 (385)
Q Consensus 235 ---------~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~ 299 (385)
++.+|+++|++.++. ++++|++..+++| ... ++++|.++|+++|++||+|++|. ++...+. ..
T Consensus 158 ~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~g~~~~ 235 (429)
T 1yiz_A 158 KTGGTISSADWVLDNNELEALFNE-KTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYE-HMVFEPFEHI 235 (429)
T ss_dssp CSSSSEEGGGCBCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTSCCC
T ss_pred cccccccccCcccCHHHHHHHhcc-CceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEecccc-ccccCCCCCc
Confidence 356999999999864 7898888777665 445 48999999999999999999984 4443332 11
Q ss_pred C--CC--C-CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 300 D--PF--K-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 300 ~--p~--~-gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
. .+ . +.|+++.|+||++ +|.|.|++++++ ++.+.+......... +.+....++...+|+.
T Consensus 236 ~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~ 302 (429)
T 1yiz_A 236 RICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE------ALLKNLQMVHQNCVY-TCATPIQEAIAVGFET 302 (429)
T ss_dssp CGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH------HHHHHHHHHHHTTTC-CCCHHHHHHHHHHHHH
T ss_pred ChhhccCCcCceEEEecchhccCCCCcceEEEEeCH------HHHHHHHHHHhhccc-CCChHHHHHHHHHHhc
Confidence 1 12 1 4678999999997 466789999986 576666543221122 3344455566677776
No 54
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.81 E-value=7.5e-19 Score=173.47 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=146.2
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--CCCCcceeecCCcHH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGSP 179 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~--~~~~~~~V~~~sGs~ 179 (385)
.+++...++ ..++.+.+++...+... ..+|+.. .|. .++++.+.+++.+.+|++ .+ ..+.+.+|++
T Consensus 43 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~---~g~---~~lr~~la~~~~~~~g~~~~~~---~v~~~~g~t~ 112 (389)
T 1o4s_A 43 VINLTAGEPDFPTPEPVVEEAVRFLQKG-EVKYTDP---RGI---YELREGIAKRIGERYKKDISPD---QVVVTNGAKQ 112 (389)
T ss_dssp CEECCCSSCSSCCCHHHHHHHHHHHTTC-CCCCCCT---TCC---HHHHHHHHHHHHHHHTCCCCGG---GEEEESHHHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHhcC-CCCCCCC---CCC---HHHHHHHHHHHHHHhCCCCCHH---HEEEecCHHH
Confidence 456654444 24789999998777532 2234321 133 378887788888888874 32 2344455667
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
|+..++.++++|||+|++.++.|.++.. .+...|..+..++ +++ +++.+|+++|++.+++ ++|+|++.
T Consensus 113 al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 181 (389)
T 1o4s_A 113 ALFNAFMALLDPGDEVIVFSPVWVSYIP--------QIILAGGTVNVVE--TFMSKNFQPSLEEVEGLLVG-KTKAVLIN 181 (389)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--CCGGGTTCCCHHHHHHTCCT-TEEEEEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEe--cCCccCCCCCHHHHHHhccc-CceEEEEc
Confidence 9999999999999999999987655421 3345676555555 443 2457899999999865 68888887
Q ss_pred CCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCC--C---CCCcEEEECCCccC--ccccEEEEEE
Q 016668 259 ASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--F---KYCDVVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 259 ~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p--~---~gaDiv~~S~hK~l--~GprgG~I~~ 326 (385)
.+++| ...+ +++|.++|+++|+++|+|++|.. +...+..++. + .+.|++++|+||++ +|.|.|++++
T Consensus 182 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~-~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~ 260 (389)
T 1o4s_A 182 SPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDS-LVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLIS 260 (389)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-SBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEe
Confidence 76654 4555 89999999999999999999864 3333321111 1 25689999999998 5667899999
Q ss_pred eCCCCchhHHHHHHhhc
Q 016668 327 KKDPVLGVELESAINNA 343 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~~ 343 (385)
++ ++.+.+...
T Consensus 261 ~~------~~~~~l~~~ 271 (389)
T 1o4s_A 261 SE------KVATAVSKI 271 (389)
T ss_dssp CH------HHHHHHHHH
T ss_pred CH------HHHHHHHHH
Confidence 76 566666544
No 55
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.81 E-value=1.2e-18 Score=171.22 Aligned_cols=234 Identities=15% Similarity=0.066 Sum_probs=153.8
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC-cHHH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPA 180 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s-Gs~A 180 (385)
-+++...++ .+++.+.+++...+.+. ..+|+. ..|. .++++.+.+++.+.+|++.+ . .+|.+++ |++|
T Consensus 32 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~g~---~~l~~~la~~~~~~~g~~~~-~-~~v~~~~g~~~a 102 (388)
T 1j32_A 32 VCSFSAGEPDFNTPKHIVEAAKAALEQG-KTRYGP---AAGE---PRLREAIAQKLQRDNGLCYG-A-DNILVTNGGKQS 102 (388)
T ss_dssp CEECCCSSCSSCCCHHHHHHHHHHHHTT-CCSCCC---TTCC---HHHHHHHHHHHHHHHCCCCC-G-GGEEEESHHHHH
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHhcC-CCCCCC---CCCC---HHHHHHHHHHHHHhcCCCCC-h-hhEEEcCCHHHH
Confidence 355554443 25789999988776442 223433 1233 37888888888888886431 1 1344444 5779
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+..++.++++|||+|++.++.|.++.. .+...|..+..++ .+++ ++.+|+++|++.+++ ++++|++..
T Consensus 103 ~~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 171 (388)
T 1j32_A 103 IFNLMLAMIEPGDEVIIPAPFWVSYPE--------MVKLAEGTPVILP--TTVETQFKVSPEQIRQAITP-KTKLLVFNT 171 (388)
T ss_dssp HHHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC--CCGGGTTCCCHHHHHHHCCT-TEEEEEEES
T ss_pred HHHHHHHhcCCCCEEEEcCCCChhHHH--------HHHHcCCEEEEec--CCcccCCCCCHHHHHHhcCc-CceEEEEeC
Confidence 999999999999999999987655321 2345666554444 4432 457999999999865 688888777
Q ss_pred CCCC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccCc-ccCC--CC----CCcEEEECCCccC--ccccEEEEE
Q 016668 260 SAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADP--FK----YCDVVTTTTHKSL--RGPRGGMIF 325 (385)
Q Consensus 260 s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p--~~----gaDiv~~S~hK~l--~GprgG~I~ 325 (385)
+++| ... ++++|.++|+++|+++++|++|. ++...+. .++. ++ +.|+++.|+||++ +|+|.|+++
T Consensus 172 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~ 250 (388)
T 1j32_A 172 PSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYE-KILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLA 250 (388)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEE
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccch-hcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEE
Confidence 7665 443 48999999999999999999985 3443332 1111 21 3578999999998 567789999
Q ss_pred EeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+++ ++.+.+.........+.+... .++...+++
T Consensus 251 ~~~------~~~~~l~~~~~~~~~~~~~~~-~~a~~~~l~ 283 (388)
T 1j32_A 251 GPV------PLVKAATKIQGHSTSNVCTFA-QYGAIAAYE 283 (388)
T ss_dssp CCH------HHHHHHHHHHHTTTCSCCHHH-HHHHHHHHH
T ss_pred eCH------HHHHHHHHHHhhcccCCCHHH-HHHHHHHHh
Confidence 877 576666554333333333333 333334554
No 56
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.81 E-value=1e-18 Score=172.64 Aligned_cols=230 Identities=18% Similarity=0.140 Sum_probs=154.3
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceeecCCcHHHHHHHHHHh--
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPLSGSPANFEVYTAI-- 188 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~-~~~~~~~~V~~~sGs~A~~~a~~al-- 188 (385)
..++.|++++...+.+.. +++.. .+.-+....+.++ .+++++++++|. +.+ ..+.+.+|+.|+..++.++
T Consensus 39 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~y~~~~~~~~~-~l~~~la~~~~~~~~~---~v~~~~g~t~a~~~~~~~~~~ 112 (420)
T 1t3i_A 39 QKPRAVLEKLMHYYENDN--ANVHRGAHQLSVRATDAYE-AVRNKVAKFINARSPR---EIVYTRNATEAINLVAYSWGM 112 (420)
T ss_dssp CCCHHHHHHHHHHHHHTC--CCC--CCSHHHHHHHHHHH-HHHHHHHHHTTCSCGG---GEEEESSHHHHHHHHHHHTHH
T ss_pred CCCHHHHHHHHHHHHhcc--CCCCcccchHHHHHHHHHH-HHHHHHHHHcCCCCCC---eEEEcCChHHHHHHHHHHhhh
Confidence 568999999988776532 22221 1111211122233 366789999998 442 2355667788999999999
Q ss_pred --ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CC
Q 016668 189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PR 264 (385)
Q Consensus 189 --l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~ 264 (385)
++|||+|+++++.|.+... .+. ..+...|..+..++ ++ +++.+|++++++.+++ ++++|++..+++ |.
T Consensus 113 ~~~~~gd~Vl~~~~~~~~~~~-~~~---~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~ 184 (420)
T 1t3i_A 113 NNLKAGDEIITTVMEHHSNLV-PWQ---MVAAKTGAVLKFVQ--LD-EQESFDLEHFKTLLSE-KTKLVTVVHISNTLGC 184 (420)
T ss_dssp HHCCTTCEEEEETTCCGGGTH-HHH---HHHHHHCCEEEEEC--BC-TTSSBCHHHHHHHCCT-TEEEEEEESBCTTTCB
T ss_pred cccCCCCEEEECcchhHHHHH-HHH---HHHHhcCcEEEEec--cC-CCCCcCHHHHHHhhCC-CceEEEEeCCcccccC
Confidence 9999999999987755321 010 11234465444444 54 4577999999999965 789998877664 56
Q ss_pred CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCcccc-EEEEEEeCCCCchhHHHHHHh
Q 016668 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPR-GGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gpr-gG~I~~~~~~~~~~~~~~~i~ 341 (385)
..|+++|.++|+++|+++|+|++|+.|.. +..+. +.|++++|+||.+ ||. +|++++++ ++.+++.
T Consensus 185 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~-----~~~~~~~~~di~~~s~sK~~-~~~g~G~~~~~~------~~~~~~~ 252 (420)
T 1t3i_A 185 VNPAEEIAQLAHQAGAKVLVDACQSAPHY-----PLDVQLIDCDWLVASGHKMC-APTGIGFLYGKE------EILEAMP 252 (420)
T ss_dssp BCCHHHHHHHHHHTTCEEEEECTTTTTTS-----CCCHHHHTCSEEEEEGGGTT-SCTTCEEEEECH------HHHHHSC
T ss_pred cCCHHHHHHHHHHcCCEEEEEhhhccCCc-----cCchhhcCCCEEEEehhhhc-CCCceEEEEEch------HHHhhcC
Confidence 78999999999999999999999976532 11122 6899999999955 555 48888876 6777665
Q ss_pred hccCCC--------------------ccCCChHHHHHHHHHHHHHhh
Q 016668 342 NAVFPG--------------------LQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 342 ~~~fp~--------------------~qg~p~~~~iaala~Al~e~~ 368 (385)
.....+ ..+++....++++..+++.+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 299 (420)
T 1t3i_A 253 PFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT 299 (420)
T ss_dssp CCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred ceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHH
Confidence 433211 125667777777776776554
No 57
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.81 E-value=2.3e-18 Score=169.66 Aligned_cols=234 Identities=17% Similarity=0.091 Sum_probs=152.2
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecC-CcHHH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPL-SGSPA 180 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~-sGs~A 180 (385)
.++|-..++ .+++.+.+++...+.... .+|+.. .|.+ ++++.+++++.+.+|.+.+ . -+|.++ +|++|
T Consensus 33 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~~---~lr~~ia~~~~~~~g~~~~-~-~~i~~t~g~~~a 103 (385)
T 1b5p_A 33 LVALTAGEPDFDTPEHVKEAARRALAQGK-TKYAPP---AGIP---ELREALAEKFRRENGLSVT-P-EETIVTVGGSQA 103 (385)
T ss_dssp CEECCCSSCSSCCCHHHHHHHHHHHHTTC-CSCCCT---TCCH---HHHHHHHHHHHHTTCCCCC-G-GGEEEESHHHHH
T ss_pred EEEecCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCCH---HHHHHHHHHHHHHhCCCCC-h-HHEEEcCChHHH
Confidence 345544443 357889999887765422 234431 2333 6777777888887886421 1 134444 55679
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+..++.++++|||+|++.+|.|.++.. .+...|..+..++ +++ +++.+|++++++.+++ ++|+|+++.
T Consensus 104 l~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 172 (385)
T 1b5p_A 104 LFNLFQAILDPGDEVIVLSPYWVSYPE--------MVRFAGGVVVEVE--TLPEEGFVPDPERVRRAITP-RTKALVVNS 172 (385)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGGGTTCCCHHHHHTTCCT-TEEEEEEES
T ss_pred HHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEee--cCcccCCCCCHHHHHHhcCC-CCEEEEEeC
Confidence 999999999999999999987654321 3345676555444 543 3457999999998865 688888877
Q ss_pred CCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCC--CC-CCcEEEECCCccC--ccccEEEEEEeCC
Q 016668 260 SAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP--FK-YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 260 s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p--~~-gaDiv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
++|| ..++ +++|.++|+++|++||+|++|. .+...+..++. ++ +.++++.|+||++ +|.|.|++++++
T Consensus 173 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~- 250 (385)
T 1b5p_A 173 PNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYE-HLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPK- 250 (385)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGGGCCEEEECCH-
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccch-hcccCCCCCCHHHcCCCCEEEEEechhhcCCcccceEEEEeCH-
Confidence 7776 3444 8999999999999999999974 44443311111 11 3358899999997 578899999876
Q ss_pred CCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 330 ~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+++.....++..+.+ .....+...+++
T Consensus 251 -----~~~~~l~~~~~~~~~~~~-~~~~~a~~~~l~ 280 (385)
T 1b5p_A 251 -----EVIKAMASVSRQSTTSPD-TIAQWATLEALT 280 (385)
T ss_dssp -----HHHHHHHHHHHTTTCSCC-HHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHhhccCCCC-HHHHHHHHHHHh
Confidence 576666554333333333 333333333553
No 58
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.81 E-value=1.7e-19 Score=176.15 Aligned_cols=200 Identities=13% Similarity=0.048 Sum_probs=137.3
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCC-CCcceeecCCcHHHHH
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDEN-KWGVNVQPLSGSPANF 182 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~-~~~~~V~~~sGs~A~~ 182 (385)
.+.+.++...+++.|++++...+.+. + ++.........+++++++++.... ++...+.+.+|++|+.
T Consensus 6 ~~~~~p~p~~~~~~v~~a~~~~~~~~---~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~ 73 (385)
T 2bkw_A 6 DTLLIPGPIILSGAVQKALDVPSLGH---T---------SPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWD 73 (385)
T ss_dssp CEECSSSSCCCCHHHHHTTSCCCCCT---T---------SHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHH
T ss_pred ceeecCCCcCchHHHHHHHhcccccc---C---------CHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHH
Confidence 46677888889999999987543221 1 121112223356678888876420 0112355667789999
Q ss_pred HHHHHhc---cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc-cCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 183 EVYTAIL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 183 ~a~~all---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~-~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
.++.+++ +|||+|++++..+- |.+. ...+...|..+..++ + + +++.+|+++|++.+++.++|+|++.
T Consensus 74 ~~~~~~~~~~~~gd~vlv~~~~~~----~~~~--~~~~~~~g~~~~~v~--~~~-~~~~~d~~~l~~~l~~~~~~~v~~~ 144 (385)
T 2bkw_A 74 IFASNFILSKAPNKNVLVVSTGTF----SDRF--ADCLRSYGAQVDVVR--PLK-IGESVPLELITEKLSQNSYGAVTVT 144 (385)
T ss_dssp HHHHHHSCTTCSCCEEEEECSSHH----HHHH--HHHHHHTTCEEEEEC--CSS-TTSCCCHHHHHHHHHHSCCSEEEEE
T ss_pred HHHHHHhccCCCCCeEEEEcCCcc----hHHH--HHHHHHcCCceEEEe--cCC-CCCCCCHHHHHHHHhcCCCCEEEEE
Confidence 9999997 99999988754221 1110 012345566555444 4 4 4578999999999976578999887
Q ss_pred CCCC--CCCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCC
Q 016668 259 ASAY--PRDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 259 ~s~~--~~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
.+++ |...|+++|.++|+++ |+++++|++|..|.. +.++. ++|++++|+||++.||.| |+++++++
T Consensus 145 ~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~ 217 (385)
T 2bkw_A 145 HVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCE-----EFEFDEWGVDFALTASQKAIGAPAGLSISLCSSR 217 (385)
T ss_dssp SEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTS-----CCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred ccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCc-----cccccccCceEEEecCccccccCCcceEEEEcHH
Confidence 6554 4678999999999999 999999999975532 22233 679999999999988776 88888773
No 59
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.81 E-value=1.3e-18 Score=171.40 Aligned_cols=233 Identities=13% Similarity=0.053 Sum_probs=148.9
Q ss_pred hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 103 ~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
.-+++..+++. +++.|.+++...+.+.. .+|+.. .|. .++++...+++.+.+|.+.. ....+++.+|++|
T Consensus 32 ~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~lr~~ia~~~~~~~g~~~~-~~~v~~t~g~~~a 103 (391)
T 3h14_A 32 RIIHMEVGQPGTGAPRGAVEALAKSLETDA-LGYTVA---LGL---PALRQRIARLYGEWYGVDLD-PGRVVITPGSSGG 103 (391)
T ss_dssp CCEECCCSSCSSCSCHHHHHHHHHHHC--------------CC---HHHHHHHHHHHHHHHCCCCC-GGGEEEESSHHHH
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCh---HHHHHHHHHHHHHHhCCCCC-HHHEEEecChHHH
Confidence 44566544443 47889999987765422 234331 133 36777778888888885421 1123445566789
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++++ ++.+|++++++. ++++|++..
T Consensus 104 l~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~----~~~~v~i~~ 169 (391)
T 3h14_A 104 FLLAFTALFDSGDRVGIGAPGYPSYRQ--------ILRALGLVPVDLP--TAPENRLQPVPADFAGL----DLAGLMVAS 169 (391)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEE--CCGGGTTSCCHHHHTTS----CCSEEEEES
T ss_pred HHHHHHHhcCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEee--cCcccCCCCCHHHHHhc----CCeEEEECC
Confidence 999999999999999999887654421 3345676555555 4433 347899999875 689988877
Q ss_pred CCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccC--ccccEEEEEEeCCC
Q 016668 260 SAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 260 s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l--~GprgG~I~~~~~~ 330 (385)
+++| ...+ +++|.++|+++|+++|+|++|. ++...+......+ ..++++.|+||++ +|.|.|++++++
T Consensus 170 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-- 246 (391)
T 3h14_A 170 PANPTGTMLDHAAMGALIEAAQAQGASFISDEIYH-GIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPE-- 246 (391)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCG--
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcch-hcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCH--
Confidence 7765 4455 8899999999999999999984 4444443222222 3448899999998 677889999987
Q ss_pred CchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 331 ~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+......... +++....++...+++
T Consensus 247 ----~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~ 276 (391)
T 3h14_A 247 ----DQVRVVERIAQNMFI-CAPHASQVAALAALD 276 (391)
T ss_dssp ----GGHHHHHHHHHHTTC-CCCHHHHHHHHHHTT
T ss_pred ----HHHHHHHHHHhhhcc-CCCHHHHHHHHHHhC
Confidence 455555443322222 344444444444443
No 60
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.81 E-value=9.9e-20 Score=193.91 Aligned_cols=208 Identities=16% Similarity=0.043 Sum_probs=147.6
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
++++++++||++. .+.+++|+ .||.+++.++++|||+|+++.+.|.++.. .+.+.|.....++...
T Consensus 200 aE~~lA~~fGa~~-----a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~--------~l~lsGa~pv~v~~~~ 266 (715)
T 3n75_A 200 AEQYIARVFNADR-----SYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH--------LMMMSDVTPIYFRPTR 266 (715)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHSCCEEEEECCCB
T ss_pred HHHHHHHHhCCCC-----ceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEeccc
Confidence 4567999999987 35567885 79999999999999999999886654321 3456777555444322
Q ss_pred cCCCCC----C-----CHHHHHHHhhhc-C---CcEEEEcCC-CCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCc
Q 016668 232 DESTGL----V-----DYDMLEKTAILF-R---PKLIIAGAS-AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASV 297 (385)
Q Consensus 232 ~~~~~~----i-----D~d~le~~i~~~-~---pklIi~~~s-~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~ 297 (385)
++.. + |+++|++++++. + |++|++..+ .+|...|+++|.++|++++ +++|+||+.|+.+.+.
T Consensus 267 --~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~pn~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~ 342 (715)
T 3n75_A 267 --NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (715)
T ss_dssp --CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESSCTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGG
T ss_pred --cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECCCCCCccCCHHHHHHHhCcCc--EEEccccccccccCCc
Confidence 2222 4 899999999753 2 346665544 4578889999999998764 7999999888755443
Q ss_pred cc--CCCC-C--CcEE---EECCCccCccc-cEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhh
Q 016668 298 VA--DPFK-Y--CDVV---TTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 298 ~~--~p~~-g--aDiv---~~S~hK~l~Gp-rgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
.+ +++. + +|++ ++|+||+|+|+ +||++.++++ ...+++++.......++|+...+||+.+|++.+.
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~-----i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~ 417 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-----VNEETFNEAYMMHTTTSPHYGIVASTETAAAMMK 417 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESC-----CCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHS
T ss_pred cccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCch-----hhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHH
Confidence 33 3444 3 6865 99999999998 6799999875 1234455554444567899999999999998775
Q ss_pred CchHHHHHHHHhcc
Q 016668 369 SPEFKVYQNKSACK 382 (385)
Q Consensus 369 ~~~~~~y~~~v~~~ 382 (385)
.++.+++.++++++
T Consensus 418 ~~~g~~~~~~l~~~ 431 (715)
T 3n75_A 418 GNAGKRLINGSIER 431 (715)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHH
Confidence 43445566665543
No 61
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.81 E-value=8.9e-19 Score=170.77 Aligned_cols=233 Identities=17% Similarity=0.149 Sum_probs=154.1
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all 189 (385)
+...+++.|++++...+.+.|. .+...+..|.... ......++++++++|++.+ ..+.+.+|++|+..++.++.
T Consensus 9 ~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 9 ATTRVDDRVLEEMIVFYREKYG--NPNSAHGMGIEAN-LHMEKAREKVAKVLGVSPS---EIFFTSCATESINWILKTVA 82 (384)
T ss_dssp TCCCCCHHHHHHHHHHHHTCCC--CTTCSSHHHHHHH-HHHHHHHHHHHHHHTSCGG---GEEEESCHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHhcCC--CCccccHHHHHHH-HHHHHHHHHHHHHcCCCCC---eEEEECCHHHHHHHHHHhhh
Confidence 3447799999999988776442 2322111122222 3333467789999998753 23455667789999999987
Q ss_pred ----cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--
Q 016668 190 ----KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (385)
Q Consensus 190 ----~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~-- 263 (385)
+|||+|++.++.|.++... ...+...|..+ +.++++ +++.+|+++|++.+++ ++++|++..+++|
T Consensus 83 ~~~~~~gd~vl~~~~~~~~~~~~-----~~~~~~~g~~~--~~v~~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 83 ETFEKRKRTIITTPIEHKAVLET-----MKYLSMKGFKV--KYVPVD-SRGVVKLEELEKLVDE-DTFLVSIMAANNEVG 153 (384)
T ss_dssp HHTTTTCCEEEECTTSCHHHHHH-----HHHHHHTTCEE--EECCBC-TTSCBCHHHHHHHCCT-TEEEEEEESBCTTTC
T ss_pred hhccCCCCEEEECCCCchHHHHH-----HHHHHhcCCEE--EEEccC-CCCccCHHHHHHHhCC-CCeEEEEECCCCCcc
Confidence 8999999998866543211 01123456544 444455 3578999999999865 7899888776654
Q ss_pred CCCCHHHHHHHHHHcC--cEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 264 RDFDYPRMRQIADAVG--ALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~g--a~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
...|+++|.++|+++| ++||+|++|+.|.. +..+. +.|++++|+||++ ||.| |+++++++. ++.+
T Consensus 154 ~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~-----~~~~~~~~~di~~~s~sK~~-g~~G~G~~~~~~~~----~~~~ 223 (384)
T 1eg5_A 154 TIQPVEDVTRIVKKKNKETLVHVDAVQTIGKI-----PFSLEKLEVDYASFSAHKFH-GPKGVGITYIRKGV----PIRP 223 (384)
T ss_dssp BBCCHHHHHHHHHHHCTTCEEEEECTTTTTTS-----CCCCTTTCCSEEEEEGGGGT-SCTTCEEEEECTTS----CCCC
T ss_pred cccCHHHHHHHHHhcCCceEEEEEhhhhcCCc-----ccCchhcCCCEEEecHHHhc-CCCceEEEEEcCCC----cccc
Confidence 6789999999999999 99999999974421 21233 6899999999974 6665 999998752 0111
Q ss_pred HHhhcc--CCCccCCChHHHHHHHHHHHHHh
Q 016668 339 AINNAV--FPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 339 ~i~~~~--fp~~qg~p~~~~iaala~Al~e~ 367 (385)
.+.... .....++++...++++..+++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 254 (384)
T 1eg5_A 224 LIHGGGQERGLRSGTQNVPGIVGAARAMEIA 254 (384)
T ss_dssp SBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH
T ss_pred ccccCcccccccCCCCChHHHHHHHHHHHHH
Confidence 111100 01123456777777777788764
No 62
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.81 E-value=9.4e-20 Score=179.37 Aligned_cols=234 Identities=15% Similarity=0.164 Sum_probs=155.6
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
++...+++.|++++...+.+.+ ++++..+..+ ....++.+.+++++++++|++.+ ..+.+++|+.|+..++.++
T Consensus 27 ~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~l~~~la~~~~~~~~---~v~~~~g~t~al~~~~~~l 100 (400)
T 3vax_A 27 AATTRVDQRVADIVLHWMTAEF--GNAGSRHEYG-IRAKRGVERAREYLASTVSAEPD---ELIFTSGATESNNIALLGL 100 (400)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHH--SCSSCHHHHH-HHHHHHHHHHHHHHHHHTTCCGG---GEEEESCHHHHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHHHHHHhcc--CCCcccchhH-HHHHHHHHHHHHHHHHHcCCCCC---cEEEeCCHHHHHHHHHHHH
Confidence 4455779999999988876544 3343322222 22234455578899999999853 2344556678999999999
Q ss_pred c----cCCC-EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 016668 189 L----KPHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (385)
Q Consensus 189 l----~pGD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~ 263 (385)
+ +||| +|++++++|.++... ...+...|..+..++ ++ +++.+|+++|++.+++ ++++|++..+++|
T Consensus 101 ~~~~~~~gd~~Vl~~~~~~~~~~~~-----~~~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~-~~~~v~~~~~~np 171 (400)
T 3vax_A 101 APYGERTGRRHIITSAIEHKAVLEP-----LEHLAGRGFEVDFLT--PG-PSGRISVEGVMERLRP-DTLLVSLMHVNNE 171 (400)
T ss_dssp HHHHHHHTCCEEEEETTSCHHHHHH-----HHHHHTTTCEEEEEC--CC-TTCCCCHHHHHTTCCT-TEEEEECCSBCTT
T ss_pred HHhhccCCCCEEEECccccHhHHHH-----HHHHHhcCCeEEEEc--cC-CCCCcCHHHHHHhcCC-CceEEEEECCCCC
Confidence 8 8999 999998876544221 112223566544444 55 3678999999999865 7899988776654
Q ss_pred --CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCC-CcEEEECCCccCccccE-EEEE-EeCCCCchhHHH-
Q 016668 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY-CDVVTTTTHKSLRGPRG-GMIF-FKKDPVLGVELE- 337 (385)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~g-aDiv~~S~hK~l~Gprg-G~I~-~~~~~~~~~~~~- 337 (385)
...|+++|.++|+++|+++++|++|+.|.... .+.. +|++++|+|| +.||.| |+++ ++++ ++.
T Consensus 172 tG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-----~~~~~~d~~~~s~~K-~~g~~g~g~~~~~~~~-----~~~~ 240 (400)
T 3vax_A 172 TGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG-----DLTTPIDMISISGHK-IGAPKGVGALVTRRRE-----EMDD 240 (400)
T ss_dssp TCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG-----GGGSCCSEEEEETGG-GTSCSSCEEEEECBCS-----SSTT
T ss_pred ceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc-----ChhhcCcEEEEeHHH-hCCCCceEEEEEecch-----hccc
Confidence 57899999999999999999999997654311 1211 7999999999 456764 7777 7762 111
Q ss_pred --HHHhhccC------CCccCCChHHHHHHHHHHHHHhh
Q 016668 338 --SAINNAVF------PGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 338 --~~i~~~~f------p~~qg~p~~~~iaala~Al~e~~ 368 (385)
..+....+ ....++++...++++..+++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 279 (400)
T 3vax_A 241 ERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFE 279 (400)
T ss_dssp CBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHH
T ss_pred cccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHH
Confidence 11111111 11134567777888877876543
No 63
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.81 E-value=8.8e-19 Score=174.06 Aligned_cols=262 Identities=16% Similarity=0.127 Sum_probs=154.5
Q ss_pred hhhcccCChHHHHHHHHHHHHh-hh---ccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQ-FK---SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~-~~---~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~ 153 (385)
++++.++.++.+..+.+...+. .+ -+++..+++. +++.+.+++...+......+|+. ..|. .++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~---~~l~~~i 84 (412)
T 2x5d_A 11 FARIDRLPPYVFNITAELKMAARRRGEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTHGYST---SRGI---PRLRRAI 84 (412)
T ss_dssp ----------CHHHHHHHHHHHHHTTCCCEECSSCCCCSCCCHHHHHHHHHTC---------C---TTCC---HHHHHHH
T ss_pred hHHHhhcCchHHHHHHHHHHHHhhcCCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC---CCCc---HHHHHHH
Confidence 4455556665555444333221 12 3555544443 57999999887664321223432 1233 3777777
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
.+++.+.+|.+.+.-...+.+.+|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ +++
T Consensus 85 a~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~~ 154 (412)
T 2x5d_A 85 SHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY--------GAVIAGAQVRSVP--LVP 154 (412)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHHTCEEEEEE--CST
T ss_pred HHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEee--cCC
Confidence 777777778632100013455667789999999999999999999987755421 2334565444444 553
Q ss_pred CCC-CCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCc-ccC--CCC-
Q 016668 234 STG-LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-VAD--PFK- 303 (385)
Q Consensus 234 ~~~-~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~--p~~- 303 (385)
+++ .+|++++++.++. ++++|+++.+++| ...+ +++|.++|+++|+++|+|++|..+ ...|. .++ .++
T Consensus 155 ~~~~~~d~~~l~~~i~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~-~~~g~~~~~~~~~~~ 232 (412)
T 2x5d_A 155 GIDFFNELERAIRESIP-KPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADI-VYDGWKAPSIMQVPG 232 (412)
T ss_dssp TSCHHHHHHHHHHTEES-CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC-BCTTCCCCCGGGSTT
T ss_pred ccCCCCCHHHHHHhccc-CceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCCCCCCChhhccC
Confidence 323 4789999998864 7899988777665 3444 688999999999999999998543 33222 111 122
Q ss_pred --CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 304 --YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 304 --gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+.|++++|+||+| +|+|.|++++++ ++.+.+........ .+++....++...+|+.
T Consensus 233 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~ 292 (412)
T 2x5d_A 233 AKDIAVEFFTLSKSYNMAGWRIGFMVGNP------ELVSALARIKSYHD-YGTFTPLQVAAIAALEG 292 (412)
T ss_dssp GGGTEEEEEECC-CCSCTTSCCEEEEECH------HHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHS
T ss_pred ccCcEEEEecCccccCCcccceEEEEcCH------HHHHHHHHHHhhhc-cCCCHHHHHHHHHHHhC
Confidence 4568999999998 577889999976 56666654322111 23444555555556653
No 64
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.81 E-value=2e-19 Score=183.59 Aligned_cols=246 Identities=15% Similarity=0.092 Sum_probs=166.8
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
++.+.+++.+.+.. +...++. .+...+...++|+.+++++++++|++ ..+ ..+++++|++|+..++.++++
T Consensus 77 ~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~~--~~~~~~ggt~a~~~a~~a~~~~~~ 151 (497)
T 3mc6_A 77 GDDLIHLQTIAYEK-YCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDTG--CGTTTSGGTESLLLACLSAKMYAL 151 (497)
T ss_dssp CHHHHHHHHHHHHH-TSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTTC--CEEEESSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHH-HhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCCC--eEEEcCcHHHHHHHHHHHHHHHHH
Confidence 46777777666543 2222222 12334556689999999999999998 222 246677788899999998865
Q ss_pred --CC---CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--C
Q 016668 191 --PH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (385)
Q Consensus 191 --pG---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~ 263 (385)
+| |+|+++.+.|.++. ..+...|..+..++ ++++++.+|+++|++.+++ ++++|+++.+++ |
T Consensus 152 ~~~g~~~~~Vi~~~~~h~~~~--------~~~~~~G~~~~~v~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG 220 (497)
T 3mc6_A 152 HHRGITEPEIIAPVTAHAGFD--------KAAYYFGMKLRHVE--LDPTTYQVDLGKVKKFINK-NTVLLVGSAPNFPHG 220 (497)
T ss_dssp HHSCCSSCEEEEETTSCHHHH--------HHHHHSCCEEEEEC--BCTTTCSBCTTTTGGGCCS-SEEEEEEETTCTTTC
T ss_pred hcCCCCCceEEEeCCccHHHH--------HHHHHcCCeEEEEe--cCcccCcCCHHHHHHHHhh-CCEEEEEECCCCCCC
Confidence 67 99999887654421 24456677655555 5544678999999999965 689998877764 5
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccc----c--Ccc-cCCC--CCCcEEEECCCccCccc-cEEEEEEeCCCCch
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVA----A--SVV-ADPF--KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLG 333 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~----~--g~~-~~p~--~gaDiv~~S~hK~l~Gp-rgG~I~~~~~~~~~ 333 (385)
...|+++|+++|+++|++|++|++|+.++.. . +.. +..+ .++|++++|+||++.|| +.|+++++++
T Consensus 221 ~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~---- 296 (497)
T 3mc6_A 221 IADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNS---- 296 (497)
T ss_dssp CCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSH----
T ss_pred cCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCH----
Confidence 7789999999999999999999999744321 1 111 1112 27899999999997555 5588888874
Q ss_pred hHHHHHHhhccCC----------CccCCChHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 334 VELESAINNAVFP----------GLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 334 ~~~~~~i~~~~fp----------~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
..........+ .+.++.....++++.++++.+...+|+++.+++.++
T Consensus 297 --~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 353 (497)
T 3mc6_A 297 --DLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGA 353 (497)
T ss_dssp --HHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 33322222212 222334445577778888877766777777776654
No 65
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.81 E-value=1.3e-19 Score=178.56 Aligned_cols=202 Identities=18% Similarity=0.159 Sum_probs=142.9
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+++-.++...++.+++++...+.... |+ ...+...+++ +.+++++|.+. .+.++|||.|+..+
T Consensus 25 ~~l~~~~p~~~~~~~~a~~~~~~~~~---~~-----~~~~~~~~l~----~~la~~~~~~~-----~i~~~~gt~al~~~ 87 (391)
T 3dr4_A 25 PRISVAAPRLDGNERDYVLECMDTTW---IS-----SVGRFIVEFE----KAFADYCGVKH-----AIACNNGTTALHLA 87 (391)
T ss_dssp ---CCCCCCCCSSHHHHHHHHHHHTC---CS-----SCSHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHH
T ss_pred ceeccCCCCCCHHHHHHHHHHHHcCC---cc-----CCChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHH
Confidence 34434455667889998887765422 11 1223344444 46888999874 47788999999999
Q ss_pred HHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 016668 185 YTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (385)
Q Consensus 185 ~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~ 263 (385)
+.++ ++|||+|+++++.|.++.. .+...|..+. .++++++++.+|++++++.+++ ++++|++.. .+|
T Consensus 88 l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~--~~~~~~~~~~~d~~~l~~~~~~-~~~~v~~~n-~tG 155 (391)
T 3dr4_A 88 LVAMGIGPGDEVIVPSLTYIASAN--------SVTYCGATPV--LVDNDPRTFNLDAAKLEALITP-RTKAIMPVH-LYG 155 (391)
T ss_dssp HHHHTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEE--EECBCTTTCSBCGGGSGGGCCT-TEEEECCBC-GGG
T ss_pred HHHcCCCCcCEEEECCCchHHHHH--------HHHHCCCEEE--EEecCccccCcCHHHHHHhcCC-CceEEEEEC-CCC
Confidence 9999 9999999999987755421 3345666444 4456656788999999998864 678887643 356
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEEC--CCccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTT--THKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S--~hK~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
...|+++|.++|+++|++|++|++|+.|....+..... ..|++++| .||+|+|++||+++++++ ++.+++.
T Consensus 156 ~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~S~s~~K~l~~g~gg~~~~~~~-----~~~~~~~ 228 (391)
T 3dr4_A 156 QICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGS--LGDCATFSFFGNAIITTGEGGMITTNDD-----DLAAKMR 228 (391)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTS--SSSEEEEECBTTSSSCCBSCEEEEESCH-----HHHHHHH
T ss_pred ChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecc--cCCEEEEECCCCCcCCcCCeEEEEECCH-----HHHHHHH
Confidence 77899999999999999999999998776654321111 24666666 669998889999988875 5666554
Q ss_pred h
Q 016668 342 N 342 (385)
Q Consensus 342 ~ 342 (385)
.
T Consensus 229 ~ 229 (391)
T 3dr4_A 229 L 229 (391)
T ss_dssp H
T ss_pred H
Confidence 3
No 66
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.81 E-value=1.2e-18 Score=170.20 Aligned_cols=227 Identities=13% Similarity=-0.005 Sum_probs=150.5
Q ss_pred ccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 104 ~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
-+++...++. .++.+.+++...+... ..+|+. ..|. .++++...+++.+.+|.+.+ ....+.+.+|++|+
T Consensus 31 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~---~~~~---~~l~~~la~~~~~~~g~~~~-~~~v~~~~g~~~a~ 102 (370)
T 2z61_A 31 VIHLEIGEPDFNTPKPIVDEGIKSLKEG-KTHYTD---SRGI---LELREKISELYKDKYKADII-PDNIIITGGSSLGL 102 (370)
T ss_dssp CEECCCCSCSSCCCHHHHHHHHHHHHTT-CCSCCC---TTCC---HHHHHHHHHHHHHHSSCCCC-GGGEEEESSHHHHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHcC-ccCCCC---CCCC---HHHHHHHHHHHHHHhCCCCC-hhhEEECCChHHHH
Confidence 3555544442 4789999998777542 223433 1233 37887778888887775431 11234455667899
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++++|||+|++.+|.|.++.. .+...|..+..++ +|++++++.+++ ++++|++..++
T Consensus 103 ~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~v~---------~d~~~l~~~l~~-~~~~v~~~~p~ 164 (370)
T 2z61_A 103 FFALSSIIDDGDEVLIQNPCYPCYKN--------FIRFLGAKPVFCD---------FTVESLEEALSD-KTKAIIINSPS 164 (370)
T ss_dssp HHHHHHHCCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC---------SSHHHHHHHCCS-SEEEEEEESSC
T ss_pred HHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEeC---------CCHHHHHHhccc-CceEEEEcCCC
Confidence 99999999999999999987755421 2345565433332 789999999865 68888887666
Q ss_pred C--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC--CC---CCCcEEEECCCccC--ccccEEEEEEeCCCCc
Q 016668 262 Y--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF---KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 262 ~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~---~gaDiv~~S~hK~l--~GprgG~I~~~~~~~~ 332 (385)
+ |...+.+ |.++|+++|+++|+|++|.. +...+...+ .+ .+.|++++|+||++ +|.|.|++++++
T Consensus 165 nptG~~~~~~-l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---- 238 (370)
T 2z61_A 165 NPLGEVIDRE-IYEFAYENIPYIISDEIYNG-LVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISND---- 238 (370)
T ss_dssp TTTCCCCCHH-HHHHHHHHCSEEEEECTTTT-CBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCH----
T ss_pred CCcCcccCHH-HHHHHHHcCCEEEEEcchhh-cccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECH----
Confidence 5 4678899 99999999999999999864 333332211 12 15679999999998 567789999987
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+........ .+++....+++..+++
T Consensus 239 --~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~ 268 (370)
T 2z61_A 239 --EIIEAILKLQQNLF-ISAPTISQYAALKAFE 268 (370)
T ss_dssp --HHHHHHHHHHHHHT-SSSCHHHHHHHGGGGS
T ss_pred --HHHHHHHHHHhhcc-cCCCHHHHHHHHHHHh
Confidence 56666654332222 2344444445455554
No 67
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.81 E-value=2.1e-19 Score=175.90 Aligned_cols=236 Identities=17% Similarity=0.142 Sum_probs=154.7
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCC-CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGK-RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~-r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al- 188 (385)
....++.|++++...+.+.. ...+.. +.|.. .. .....+++.+++++|++.+ ..+++.+|+.|+..++.++
T Consensus 25 ~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~y~~--~~-~~~~~l~~~la~~~g~~~~---~v~~~~g~t~a~~~~~~~~~ 97 (390)
T 1elu_A 25 QGILPTVALEAITAMYGYLQ-ENGPFSIAANQH--IQ-QLIAQLRQALAETFNVDPN---TITITDNVTTGCDIVLWGLD 97 (390)
T ss_dssp CCCCCHHHHHHHHHHHHHHH-HHCSSSHHHHHH--HH-HHHHHHHHHHHHHTTSCGG---GEEEESSHHHHHHHHHHHSC
T ss_pred cCCCCHHHHHHHHHHHHHHh-ccCCcchhhHHH--HH-HHHHHHHHHHHHHcCCCHH---HEEEeCChHHHHHHHHhCCC
Confidence 44567889999887765421 111110 01111 11 2333456788999998763 2355667788999999999
Q ss_pred ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCC
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAY--PRD 265 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~ 265 (385)
++|||+|++.++.|.++... +. ......|..+..++ +++ +++.+|++++++.+++ ++++|+++.+++ |..
T Consensus 98 ~~~gd~vl~~~~~~~~~~~~-~~---~~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~nptG~~ 170 (390)
T 1elu_A 98 WHQGDEILLTDCEHPGIIAI-VQ---AIAARFGITYRFFP--VAATLNQGDAAAVLANHLGP-KTRLVILSHLLWNTGQV 170 (390)
T ss_dssp CCTTCEEEEETTCCHHHHHH-HH---HHHHHHCCEEEEEC--CGGGSSSSCHHHHHHTTCCT-TEEEEEEESBCTTTCCB
T ss_pred CCCCCEEEEecCcccHHHHH-HH---HHHHHhCcEEEEEc--CCCCCCccchHHHHHHhcCC-CceEEEEeccccCCcee
Confidence 89999999999877554210 00 01233465555444 432 3567999999998865 789998877765 467
Q ss_pred CCHHHHHHHHH----HcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 266 FDYPRMRQIAD----AVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 266 ~dl~~I~~ia~----~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
.|+++|.++|+ ++|+++++|++|+.|.. +..+. +.|++++|+||++.|+.| |+++++++ +.+
T Consensus 171 ~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~-----~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~------~~~ 239 (390)
T 1elu_A 171 LPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSL-----PLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGD------CLG 239 (390)
T ss_dssp CCHHHHHHHHHHCCSSSCCEEEEECTTTBTTB-----CCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTT------TGG
T ss_pred cCHHHHHHHHhhhhhhcCcEEEEEcccccCCc-----CCChhhcCCCEEEccccccccCCCceEEEEECHH------hHh
Confidence 89999999999 99999999999976532 22232 679999999997766655 99999874 434
Q ss_pred HHhhccC---------------------CCccCCChHHHHHHHHHHHHHhhCch
Q 016668 339 AINNAVF---------------------PGLQGGPHNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 339 ~i~~~~f---------------------p~~qg~p~~~~iaala~Al~e~~~~~ 371 (385)
++..... ....++++...++++..+++.+...+
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~ 293 (390)
T 1elu_A 240 EINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQG 293 (390)
T ss_dssp GCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHC
T ss_pred hcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcC
Confidence 4332110 01234566677777777777654433
No 68
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.81 E-value=2.9e-19 Score=174.20 Aligned_cols=226 Identities=13% Similarity=0.047 Sum_probs=154.2
Q ss_pred hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 103 ~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
.-++|-.++|. +++.|++++...+.. ..+|+... + .++ ++++++++|++.+ ..+.+++|++|
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~---~----~~l----r~~la~~~~~~~~---~v~~~~g~~~a 94 (365)
T 3get_A 31 EVIKLASNENPFGTPPKAIECLRQNANK--AHLYPDDS---M----IEL----KSTLAQKYKVQNE---NIIIGAGSDQV 94 (365)
T ss_dssp CCEECSSCCCTTCSCHHHHHHHHHHGGG--TTSCCCTT---C----HHH----HHHHHHHHTCCGG---GEEEESSHHHH
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHh--hccCCCCC---h----HHH----HHHHHHHhCCCcc---eEEECCCHHHH
Confidence 34666656555 589999999887653 23455421 2 134 4467888998764 13445556679
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++.+++ +|++++++.++ .++|+|+++.+
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~-~d~~~l~~~l~-~~~~~v~~~~p 162 (365)
T 3get_A 95 IEFAIHSKLNSKNAFLQAGVTFAMYEI--------YAKQCGAKCYKTQ--SITHNL-DEFKKLYETHK-DEIKLIFLCLP 162 (365)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCTHHHH--------HHHHHTCEEEECS--SSSCCH-HHHHHHHHHTT-TTEEEEEEESS
T ss_pred HHHHHHHHhCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEEe--cCCCCC-CCHHHHHHHhC-CCCCEEEEcCC
Confidence 999999999999999999887654321 2345566444444 433567 99999999996 47899988777
Q ss_pred CCC--CCCCHHHHHHHHH--HcCcEEEEecccccccc--ccCcccCCCC-----CCcEEEECCCccC--ccccEEEEEEe
Q 016668 261 AYP--RDFDYPRMRQIAD--AVGALLMMDMAHISGLV--AASVVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 261 ~~~--~~~dl~~I~~ia~--~~ga~livD~ah~~Gli--~~g~~~~p~~-----gaDiv~~S~hK~l--~GprgG~I~~~ 327 (385)
+|| ...+.+++.++++ ++|+++++|++|..+.. .++.....+. +.+++++|+||++ +|.|.|+++++
T Consensus 163 ~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 242 (365)
T 3get_A 163 NNPLGECLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN 242 (365)
T ss_dssp CTTTCCCCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC
T ss_pred CCCCCCCcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC
Confidence 664 6788888888888 67999999999853321 2221112211 3458899999996 67788999996
Q ss_pred CCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+ ++.+++.....+. +++....+++..+++
T Consensus 243 ~------~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 271 (365)
T 3get_A 243 A------NIISAFYKLRAPF---NVSNLALKAAVAAMD 271 (365)
T ss_dssp H------HHHHHHHHHSCTT---CSCHHHHHHHHHHHT
T ss_pred H------HHHHHHHHhcCCC---CcCHHHHHHHHHHhC
Confidence 6 6778776654432 356666666666665
No 69
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.80 E-value=3e-18 Score=166.88 Aligned_cols=247 Identities=16% Similarity=0.082 Sum_probs=160.7
Q ss_pred hhhcccCChHHHHHHHHHHHHhh---hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016668 80 DYSLGEADPEVCEIITKEKERQF---KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (385)
Q Consensus 80 ~~~l~~~dp~~~~~i~~e~~~~~---~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~ 154 (385)
...++++.++.......+..++. .-++|-..+|. +++.|++++...+.. ..+||.. + ..++ +
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~----~---~~~l----r 73 (363)
T 3ffh_A 7 KKSLAGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTSKKVAAIQANSSVE--TEIYPDG----W---ASSL----R 73 (363)
T ss_dssp CGGGTTCCC----CHHHHHHHTTTCSCCEECSSCSCTTCCCHHHHHHHHTCBSC--CCBC-----------CHHH----H
T ss_pred hHHHHhCCCCCCCCCHHHHHHhcCCCceEEccCCCCCCCCCHHHHHHHHHHHHH--hhcCCCc----c---hHHH----H
Confidence 34455666665443333333322 33566555555 589999999876532 1234421 1 1233 4
Q ss_pred HHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC
Q 016668 155 KRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~ 234 (385)
+++++++|++.+ ..+.+.+|++|+..++.++++|||+|++.++.|.++. ..+...|..+..++ +++
T Consensus 74 ~~la~~~~~~~~---~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--------~~~~~~g~~~~~v~--~~~- 139 (363)
T 3ffh_A 74 KEVADFYQLEEE---ELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYR--------QNALIEGAEVREIP--LLQ- 139 (363)
T ss_dssp HHHHHHHTCCGG---GEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHH--------HHHHHHTCEEEEEE--CCT-
T ss_pred HHHHHHhCCChh---hEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHH--------HHHHHcCCEEEEec--CCC-
Confidence 578889998764 2344556677999999999999999999988664432 12345566554444 543
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC-----CC
Q 016668 235 TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK-----YC 305 (385)
Q Consensus 235 ~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~-----ga 305 (385)
++.+|++++++.+++ ++++|++..+++| ...|.+++.++++.+ |+++++|++|. ++.. +..+..+. ..
T Consensus 140 ~~~~d~~~l~~~i~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~ 216 (363)
T 3ffh_A 140 DGEHDLEGMLNAIDE-KTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYI-EYVT-PQPEKHEKLVRTYKN 216 (363)
T ss_dssp TSCCCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTG-GGCS-SCCCCCGGGGGTCTT
T ss_pred CCCcCHHHHHHhccc-CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchH-hhcC-ccccCHHHHhhcCCC
Confidence 578999999999965 7899988777654 678999999999888 99999999985 3332 22222221 22
Q ss_pred cEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 306 DVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 306 Div~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++++.|++|++ +|.|.|++++++ ++.+++.....+ .+++....+++..+++
T Consensus 217 ~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~~~~---~~~~~~~~~~~~~~l~ 269 (363)
T 3ffh_A 217 LIITRTFSKIYGLASARVGYGIADK------EIIRQLNIVRPP---FNTTSIGQKLAIEAIK 269 (363)
T ss_dssp EEEEEESSSTTCCSSCCCEEEEECH------HHHHHHHHTCCS---CCCBHHHHHHHHHHHH
T ss_pred EEEEeechhhhcCchhceeeeecCH------HHHHHHHHhCCC---CCCCHHHHHHHHHHhc
Confidence 37889999997 567779999976 687877765442 2466666666666775
No 70
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.80 E-value=1.4e-18 Score=170.82 Aligned_cols=188 Identities=15% Similarity=0.145 Sum_probs=133.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pG 192 (385)
.++.+++++...+.... .+ |+.+ +...+++ +.+++++|.+. .|.++|||+|+..++.++ ++||
T Consensus 15 ~~~~~~~a~~~~l~~~~-~~-----~~~~-~~~~~l~----~~la~~~~~~~-----~i~~~sGt~al~~~l~~l~~~~g 78 (388)
T 1b9h_A 15 YDDAERNGLVRALEQGQ-WW-----RMGG-DEVNSFE----REFAAHHGAAH-----ALAVTNGTHALELALQVMGVGPG 78 (388)
T ss_dssp CCHHHHHHHHHHHHTSC-CB-----TTTC-SHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHHHHcCC-ee-----ecCC-HHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCCc
Confidence 34899999888775421 01 2222 3233444 56888999874 577889999999999999 9999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHH
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~ 272 (385)
|+|+++++.|.++.. .+...|..+ +.++++++++.+|+++|++.+++ ++++|+.+ +.+|...|+++|.
T Consensus 79 d~Vi~~~~~~~~~~~--------~~~~~g~~~--~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~-n~tG~~~~l~~i~ 146 (388)
T 1b9h_A 79 TEVIVPAFTFISSSQ--------AAQRLGAVT--VPVDVDAATYNLDPEAVAAAVTP-RTKVIMPV-HMAGLMADMDALA 146 (388)
T ss_dssp CEEEEESSSCTHHHH--------HHHHTTCEE--EEECBCTTTCCBCHHHHHHHCCT-TEEEECCB-CGGGCCCCHHHHH
T ss_pred CEEEECCCccHHHHH--------HHHHcCCEE--EEEecCCCcCCCCHHHHHHhcCc-CceEEEEe-CCccCcCCHHHHH
Confidence 999999987655421 334566644 44456655678999999999864 67887732 2256778999999
Q ss_pred HHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEEEEEEeCC
Q 016668 273 QIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 273 ~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG~I~~~~~ 329 (385)
++|+++|++|++|++|+.|....+.....+..+++.++|.||+++|++||+++++++
T Consensus 147 ~la~~~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~ 203 (388)
T 1b9h_A 147 KISADTGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDG 203 (388)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTT
T ss_pred HHHHHcCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCH
Confidence 999999999999999987765433211112113344555669998899999999875
No 71
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.80 E-value=4.3e-19 Score=173.87 Aligned_cols=198 Identities=21% Similarity=0.200 Sum_probs=143.3
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
.+....++.+.+++...+.... ++ ..+...++| +.+++++|.+. .+.++|||.|+..++.++
T Consensus 9 ~~~~~~~~~v~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~~~~~sGt~al~~al~~~ 70 (367)
T 3nyt_A 9 NQQARIKDKIDAGIQRVLRHGQ--------YI-LGPEVTELE----DRLADFVGAKY-----CISCANGTDALQIVQMAL 70 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC--------CS-SCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHT
T ss_pred ccccccCHHHHHHHHHHHhcCC--------cc-CChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHh
Confidence 3444567888888877765421 12 234344554 46888999874 477889999999999999
Q ss_pred -ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCC
Q 016668 189 -LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFD 267 (385)
Q Consensus 189 -l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~d 267 (385)
++|||+|+++++.|.+... .+...|.. ++.++++++++.+|++++++.+++ ++++|+.+. .+|...|
T Consensus 71 ~~~~gd~Vi~~~~~~~~~~~--------~~~~~G~~--~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~ 138 (367)
T 3nyt_A 71 GVGPGDEVITPGFTYVATAE--------TVALLGAK--PVYVDIDPRTYNLDPQLLEAAITP-RTKAIIPVS-LYGQCAD 138 (367)
T ss_dssp TCCTTCEEEEESSSCTHHHH--------HHHHTTCE--EEEECBCTTTCSBCGGGTGGGCCT-TEEEECCBC-GGGCCCC
T ss_pred CCCCcCEEEECCCccHHHHH--------HHHHcCCE--EEEEecCCccCCcCHHHHHHhcCc-CCcEEEeeC-CccChhh
Confidence 9999999999987654321 33456664 445556666689999999999864 788887543 3567789
Q ss_pred HHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECC--CccCcc-ccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 268 YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTT--HKSLRG-PRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 268 l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~--hK~l~G-prgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+++|.++|+++|++||+|++|+.|....+..... ..|++++|+ ||++.+ ..||+++++++ ++.+++...
T Consensus 139 ~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~--~~di~~~Sf~~~K~l~~~g~gg~~~~~~~-----~l~~~~~~~ 210 (367)
T 3nyt_A 139 FDAINAIASKYGIPVIEDAAQSFGASYKGKRSCN--LSTVACTSFFPSAPLGCYGDGGAIFTNDD-----ELATAIRQI 210 (367)
T ss_dssp HHHHHHHHHHTTCCBEEECTTTTTCEETTEETTS--SSSEEEEECCTTSSSCCSSCCEEEEESCH-----HHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECccccCCeECCeeccC--CCCEEEEECCCCCcCCCcCceeEEEeCCH-----HHHHHHHHH
Confidence 9999999999999999999998776644322111 239999996 899976 46899998765 677666543
No 72
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.80 E-value=1.8e-18 Score=168.72 Aligned_cols=227 Identities=15% Similarity=0.084 Sum_probs=153.7
Q ss_pred hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC-CCCCCcceeecC-CcH
Q 016668 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL-DENKWGVNVQPL-SGS 178 (385)
Q Consensus 103 ~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~-~~~~~~~~V~~~-sGs 178 (385)
.-++|...+|. +++.|++++...+.+....+|+.. | ..++ ++++++++|+ +.+ +|.++ +|+
T Consensus 31 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~---~~~l----~~~la~~~g~~~~~----~i~~~~g~t 95 (367)
T 3euc_A 31 GLVKLDAMENPYRLPPALRSELAARLGEVALNRYPVP----S---SEAL----RAKLKEVMQVPAGM----EVLLGNGSD 95 (367)
T ss_dssp TCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCCC----C---HHHH----HHHHHHHHTCCTTC----EEEEEEHHH
T ss_pred CeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----c---HHHH----HHHHHHHhCCCCcc----eEEEcCCHH
Confidence 34666656655 589999999887764222344431 2 2244 4567888998 442 34444 456
Q ss_pred HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
+|+..++.++++|||+|++.++.|.++.. .+...|..+..++ +++ ++.+|++++++.+++.++|+|++.
T Consensus 96 ~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~-~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 96 EIISMLALAAARPGAKVMAPVPGFVMYAM--------SAQFAGLEFVGVP--LRA-DFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp HHHHHHHHHTCCTTCEEEEEESCSCCSCH--------HHHTTTCEEEEEE--CCT-TSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEEcCCCHHHHHH--------HHHHcCCeEEEec--CCC-CCCCCHHHHHHHhhccCCCEEEEc
Confidence 79999999999999999999887654321 3345676555444 553 578999999999976579999887
Q ss_pred CCCCC--CCC---CHHHHHHHHHHc--CcEEEEeccccccccccCcccCCCC--CCcEEEECCCccC-ccccEEEEEEeC
Q 016668 259 ASAYP--RDF---DYPRMRQIADAV--GALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRGGMIFFKK 328 (385)
Q Consensus 259 ~s~~~--~~~---dl~~I~~ia~~~--ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l-~GprgG~I~~~~ 328 (385)
.++|| ... ++++|.++|+++ |+++++|++|. ++...+..+ .++ +.++++.|+||+. +|.+.|++++++
T Consensus 165 ~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~-~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 242 (367)
T 3euc_A 165 YPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQ-PFAQESWMS-RLTDFGNLLVMRTVSKLGLAGIRLGYVAGDP 242 (367)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTC-CSSSCCSGG-GGGTCTTEEEEEECCCTTSCSCCEEEEEECH
T ss_pred CCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcch-hhcccchHH-HHhhCCCEEEEecchhhcccccCceeeeeCH
Confidence 77765 343 477888889999 99999999985 333222211 122 3458899999983 567889999976
Q ss_pred CCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++.+.+.....+. +++....++...+++.
T Consensus 243 ------~~~~~~~~~~~~~---~~~~~~~~a~~~~l~~ 271 (367)
T 3euc_A 243 ------QWLEQLDKVRPPY---NVNVLTEATALFALEH 271 (367)
T ss_dssp ------HHHHHHGGGCCSS---CCCHHHHHHHHHHHTT
T ss_pred ------HHHHHHHHhCCCC---CCCHHHHHHHHHHhcC
Confidence 6778776654332 3555666666666653
No 73
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.80 E-value=4.6e-19 Score=176.98 Aligned_cols=236 Identities=12% Similarity=0.085 Sum_probs=159.7
Q ss_pred cccccC--CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceeecCCcHHH
Q 016668 105 LELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQPLSGSPA 180 (385)
Q Consensus 105 l~Lias--en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~~~sGs~A 180 (385)
|++..+ +-..+|.|.+++...+... ..+|+. .. .++++.+++++++.+|. +.+ ..+++++|++|
T Consensus 64 i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~~---~~l~~~l~~~l~~~~g~~~~~~---~v~~~~g~~ea 131 (421)
T 3l8a_A 64 LQMWVADMDFLPVPEIKEAIINYGREH-IFGYNY-----FN---DDLYQAVIDWERKEHDYAVVKE---DILFIDGVVPA 131 (421)
T ss_dssp EECCSSCCCSCCCHHHHHHHHHHHHHC-CSSCBC-----CC---HHHHHHHHHHHHHHHCCCCCGG---GEEEESCHHHH
T ss_pred eecccCCCCCCCCHHHHHHHHHHHhcC-CcCCCC-----CC---HHHHHHHHHHHHHHhCCCCCHH---HEEEcCCHHHH
Confidence 444433 3345899999998877542 223432 11 36777788899999994 442 23344455569
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.+++++||+|++.++.|.++.. .+...|..+..+++.....++.+|+++|++.+++.++++|+++.+
T Consensus 132 ~~~a~~~~~~~gd~Vi~~~~~y~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p 203 (421)
T 3l8a_A 132 ISIALQAFSEKGDAVLINSPVYYPFAR--------TIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSP 203 (421)
T ss_dssp HHHHHHHHSCTEEEEEEEESCCHHHHH--------HHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESS
T ss_pred HHHHHHHhcCCCCEEEECCCCcHHHHH--------HHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCC
Confidence 999999999999999999887654321 334566655555543222334689999999997557899988877
Q ss_pred CCC--CC---CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-------CCcEEEECCCccC--ccccEEEEEE
Q 016668 261 AYP--RD---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 261 ~~~--~~---~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-------gaDiv~~S~hK~l--~GprgG~I~~ 326 (385)
++| .. .++++|+++|+++|++||+|++| .++...|....++. +.++++.|++|+| +|.+.|++++
T Consensus 204 ~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~ 282 (421)
T 3l8a_A 204 HNPGGRVWDNDDLIKIAELCKKHGVILVSDEIH-QDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAII 282 (421)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTT-TTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccc-cccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEc
Confidence 665 34 36899999999999999999998 45555443222221 2237899999997 5678899998
Q ss_pred eCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+++ ++.+.+.........++++...+++...++++
T Consensus 283 ~~~-----~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~ 317 (421)
T 3l8a_A 283 QNE-----SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY 317 (421)
T ss_dssp CSH-----HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH
T ss_pred CCH-----HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc
Confidence 844 67777655432223345666777777777764
No 74
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.80 E-value=9.7e-19 Score=172.89 Aligned_cols=261 Identities=13% Similarity=0.001 Sum_probs=165.3
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccC--CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRAL 158 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Lias--en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la 158 (385)
+++..+++..+..+.+. .....-++|-.. +..+++.|.+++...+.+....+|+.. .|.+ ++++...+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~---~l~~~la~~~~ 75 (410)
T 3e2y_A 3 KRIEGLDSNVWVEFTKL-AADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG---FGHP---ALVKALSCLYG 75 (410)
T ss_dssp GGGTTCCCCHHHHTTTT-TTSTTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCT---TCCH---HHHHHHHHHHH
T ss_pred hhhccCCccHHHHHHHH-hcCCCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCC---CChH---HHHHHHHHHHH
Confidence 34555555544433221 111233555433 334789999999888764333345442 1333 67777778888
Q ss_pred HHcCCCCCCCcceeecC-CcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc-----
Q 016668 159 AAFNLDENKWGVNVQPL-SGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD----- 232 (385)
Q Consensus 159 ~lfg~~~~~~~~~V~~~-sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~----- 232 (385)
+.+|.+.+ ...+|.++ +|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++++..
T Consensus 76 ~~~~~~~~-~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~~~~g~ 146 (410)
T 3e2y_A 76 KIYQRQID-PNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEP--------MVRMAGAVPVFIPLRSKPTDGM 146 (410)
T ss_dssp HHHTSCCC-TTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEECEECCCCSS
T ss_pred HHhCCCCC-CCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEEeccccccccc
Confidence 88886532 10134444 45679999999999999999999887654421 23456665555554321
Q ss_pred ---CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CC---CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-
Q 016668 233 ---ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RD---FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK- 303 (385)
Q Consensus 233 ---~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~---~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~- 303 (385)
.+++.+|++++++.+++ ++++|+++.+++| .. .++++|+++|+++|+++|+|++|. ++...+..+.++.
T Consensus 147 ~~~~~~~~~d~~~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~ 224 (410)
T 3e2y_A 147 KWTSSDWTFDPRELESKFSS-KTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYE-WLVYTGHTHVKIAT 224 (410)
T ss_dssp CCBGGGEECCHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGG
T ss_pred cccccCCcCCHHHHHhhcCC-CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhh-hcccCCCCCCCHHH
Confidence 12346899999998864 7899988877765 33 368999999999999999999984 4444443221221
Q ss_pred -----CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 304 -----YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 304 -----gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+.++++.|+||++ +|+|.|++++++ ++.+.+......... +++....++.+.+++.
T Consensus 225 ~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~ 287 (410)
T 3e2y_A 225 LPGMWERTITIGSAGKTFSVTGWKLGWSIGPA------HLIKHLQTVQQNSFY-TCATPLQAALAEAFWI 287 (410)
T ss_dssp STTCGGGEEEEEEHHHHSSCGGGCCEEEECCH------HHHHHHHHHHHTTTC-CCCHHHHHHHHHHHHH
T ss_pred cCCccCeEEEEecchhhcCCCCceEEEEEECH------HHHHHHHHHHHhhcc-CCChHHHHHHHHHHHh
Confidence 2237899999998 578889999887 566666544332222 3444555555666653
No 75
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.80 E-value=1e-18 Score=170.80 Aligned_cols=235 Identities=13% Similarity=0.165 Sum_probs=154.8
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCCcHHH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~sGs~A 180 (385)
+++...++ .+++.|.+++...+.+. ..+|+.. ..++++.+++++++.+| ++.+ ..+.+++|++|
T Consensus 27 i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~--------~~~~~~~l~~~l~~~~g~~~~~~---~v~~~~g~~~a 94 (383)
T 3kax_A 27 IHAWIADMDFEVPQPIQTALKKRIEHP-IFGYTLP--------PENIGDIICNWTKKQYNWDIQKE---WIVFSAGIVPA 94 (383)
T ss_dssp EECCCSSCSSCCCHHHHHHHHHHHHSC-CCCCCCC--------CTTHHHHHHHHHHHHHCCCCCGG---GEEEESCHHHH
T ss_pred eecccccCCCCCCHHHHHHHHHHHhcC-CCCCCCC--------CHHHHHHHHHHHHHHhCCCCChh---hEEEcCCHHHH
Confidence 44443333 35899999998877542 2234431 12566777888999999 4443 23445556779
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.++++|||+|++.++.|.++.. .+...|..+..++++.+..++.+|++++++.++ .++|+|++..+
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~-~~~~~v~i~~p 165 (383)
T 3kax_A 95 LSTSIQAFTKENESVLVQPPIYPPFFE--------MVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ-QGVKLMLLCSP 165 (383)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCHHHHH--------HHHHTTCEEEECCCEEETTEEECCHHHHHHHHT-TTCCEEEEESS
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHH--------HHHHcCCEEEeccceecCCcEEEcHHHHHHHhC-cCCeEEEEeCC
Confidence 999999999999999999987655421 334566654444432211123589999999994 47899988777
Q ss_pred CCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-------CCcEEEECCCccC--ccccEEEEEE
Q 016668 261 AYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 261 ~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-------gaDiv~~S~hK~l--~GprgG~I~~ 326 (385)
++| ...+ +++|.++|+++|+++|+|++|. ++...|..+.++. +.++++.|+||++ +|.+.|++++
T Consensus 166 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 244 (383)
T 3kax_A 166 HNPIGRVWKKEELTKLGSLCTKYNVIVVADEIHS-DIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIII 244 (383)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC
T ss_pred CCCCCcCcCHHHHHHHHHHHHHCCCEEEEEcccc-ccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEe
Confidence 765 3444 6677777999999999999984 4444443222221 2237899999986 5678899988
Q ss_pred eCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 327 KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+++ ++.+.+.........++++....++...+++.
T Consensus 245 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 245 PNE-----KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp CCH-----HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT
T ss_pred CCH-----HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh
Confidence 543 67776665443333345666666666666643
No 76
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.80 E-value=1.5e-18 Score=172.51 Aligned_cols=195 Identities=18% Similarity=0.211 Sum_probs=130.8
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
+..+..+.++..+.+.+++.. +.+. ..+|...|+ +++..++++ +++++++|.+. .+.++||++|+..
T Consensus 29 ~~p~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~r~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~a~~~ 95 (398)
T 1gc0_A 29 VPPVYQTATFTFPTVEYGAAC-FAGE-QAGHFYSRI--SNPTLNLLE----ARMASLEGGEA-----GLALASGMGAITS 95 (398)
T ss_dssp SCCBCCCSCBCCC-------------------------CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHH
T ss_pred CCCccCCCccccCCHHHHHHh-hcCC-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHH
Confidence 445567788888888877652 2222 223444333 455555555 46888999873 4778999999999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~ 263 (385)
++.++++|||+|+++++.|+++..... ......|..+..++ . .|++++++.+++ ++++|+++.++++
T Consensus 96 ~l~~~~~~gd~vl~~~~~~~~~~~~~~----~~~~~~g~~~~~~~--~------~d~~~l~~~i~~-~~~~v~~~~~~np 162 (398)
T 1gc0_A 96 TLWTLLRPGDEVLLGNTLYGCTFAFLH----HGIGEFGVKLRHVD--M------ADLQALEAAMTP-ATRVIYFESPANP 162 (398)
T ss_dssp HHHHHCCTTCEEEEESSCCSHHHHHHH----HTGGGGTCEEEEEC--T------TCHHHHHHHCCT-TEEEEEEESSCTT
T ss_pred HHHHHhcCCCEEEEeCCCchhHHHHHH----HHHHHcCCEEEEEC--C------CCHHHHHHhcCC-CCeEEEEECCCCC
Confidence 999999999999999988766432100 01134455443332 2 389999999865 7899998877664
Q ss_pred --CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCC
Q 016668 264 --RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (385)
Q Consensus 264 --~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~ 329 (385)
...|+++|.++|+++|+++++|++|..+.. ..++. ++|+++.|+||++.||. ||+++++++
T Consensus 163 tG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~-----~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~ 229 (398)
T 1gc0_A 163 NMHMADIAGVAKIARKHGATVVVDNTYCTPYL-----QRPLELGADLVVHSATKYLSGHGDITAGIVVGSQA 229 (398)
T ss_dssp TCCCCCHHHHHHHHGGGTCEEEEECTTTHHHH-----CCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHH
T ss_pred CcccccHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCceEEEECCccccCCCCCCeEEEEEEChH
Confidence 678999999999999999999999976643 22344 78999999999997764 689988873
No 77
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.80 E-value=2.6e-19 Score=175.45 Aligned_cols=192 Identities=16% Similarity=0.101 Sum_probs=140.4
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~p 191 (385)
..++.+++++...+.... | ...+...++| +.+++++|.+. .+.+.|||.|+..++.++ ++|
T Consensus 14 ~~~~~~~~a~~~~~~~~~--------~-~~~~~~~~l~----~~la~~~~~~~-----~i~~~sgt~al~~~l~~l~~~~ 75 (373)
T 3frk_A 14 EIEYEIKFKFEEIYKRNW--------F-ILGDEDKKFE----QEFADYCNVNY-----CIGCGNGLDALHLILKGYDIGF 75 (373)
T ss_dssp HHHHHHHHHHHHHHHHTC--------C-SSSHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHCCC--------c-cCCchHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 446778888877665421 1 1224344444 46888999874 477889999999999999 999
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHH
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRM 271 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I 271 (385)
||+|+++++.|.+... .+...|..+ +.++++++++.+|++++++.+++ ++++|++.. .+|...|+++|
T Consensus 76 gd~Vi~~~~~~~~~~~--------~~~~~g~~~--~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~n-~~G~~~~l~~i 143 (373)
T 3frk_A 76 GDEVIVPSNTFIATAL--------AVSYTGAKP--IFVEPDIRTYNIDPSLIESAITE-KTKAIIAVH-LYGQPADMDEI 143 (373)
T ss_dssp TCEEEEETTSCTHHHH--------HHHHHSCEE--EEECEETTTTEECGGGTGGGCCT-TEEEEEEEC-CTTCCCCHHHH
T ss_pred cCEEEECCCCcHHHHH--------HHHHcCCEE--EEEeccccccCcCHHHHHHhcCC-CCeEEEEEC-CCcCcccHHHH
Confidence 9999999987755321 334556644 44456656788999999999865 788888543 36778899999
Q ss_pred HHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCC--ccCcc-ccEEEEEEeCCCCchhHHHHHHhh
Q 016668 272 RQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 272 ~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~h--K~l~G-prgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.++|+++|++|++|++|+.|....+. ++. .+|++++|+| |++++ +.||+++++++ ++.+++..
T Consensus 144 ~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~-----~~~~~~~~ 210 (373)
T 3frk_A 144 KRIAKKYNLKLIEDAAQAHGSLYKGM---KVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDK-----DLAEKIKA 210 (373)
T ss_dssp HHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSSCEEEEESCH-----HHHHHHHH
T ss_pred HHHHHHcCCEEEEECCcccCCEECCE---eccccccEEEEeCcCCCccCccceeEEEEeCCH-----HHHHHHHH
Confidence 99999999999999999877654332 122 3699888855 99977 67899998875 56665543
No 78
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.79 E-value=2.3e-18 Score=172.56 Aligned_cols=229 Identities=16% Similarity=0.109 Sum_probs=151.1
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-----CCCCCCcceeecCCcHHHHHHHHH
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-----LDENKWGVNVQPLSGSPANFEVYT 186 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg-----~~~~~~~~~V~~~sGs~A~~~a~~ 186 (385)
.++++.|++++...+......+|+.. .|.+ ++++ .++++++ ++.+ ..+++.+|+.|+..++.
T Consensus 70 ~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~---~lr~----~la~~~~~~~~~~~~~---~v~~t~g~t~al~~~~~ 136 (427)
T 3dyd_A 70 LPTDPEVTQAMKDALDSGKYNGYAPS---IGFL---SSRE----EIASYYHCPEAPLEAK---DVILTSGCSQAIDLCLA 136 (427)
T ss_dssp SCCCHHHHHHHHHHHHHCCSSSCCCT---TCCH---HHHH----HHHHHHCBTTBCCCGG---GEEEESSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCcCCCCCCC---CCcH---HHHH----HHHHHHhhcCCCCChH---HEEEecCcHHHHHHHHH
Confidence 36799999999888765433345431 2332 4544 5666776 4443 23555667789999999
Q ss_pred HhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--C
Q 016668 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--R 264 (385)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~ 264 (385)
++++|||+|++.+|.|.++.. .+...|..+..+++.. ++++.+|++++++.+++ ++++|++..+++| .
T Consensus 137 ~l~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~-~~~~~~d~~~l~~~l~~-~~~~v~i~~p~nptG~ 206 (427)
T 3dyd_A 137 VLANPGQNILVPRPGFSLYKT--------LAESMGIEVKLYNLLP-EKSWEIDLKQLEYLIDE-KTACLIVNNPSNPCGS 206 (427)
T ss_dssp HHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEEEEG-GGTTEECHHHHHSSCCT-TEEEEEEESSCTTTCC
T ss_pred HhcCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEEeccc-ccCCCCCHHHHHHHhcc-CCCEEEEECCCCCCCC
Confidence 999999999999987655421 3345676555555422 13567999999999865 6788877776665 5
Q ss_pred CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCc---EEEECCCccC--ccccEEEEEEeCCCC-ch
Q 016668 265 DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD---VVTTTTHKSL--RGPRGGMIFFKKDPV-LG 333 (385)
Q Consensus 265 ~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaD---iv~~S~hK~l--~GprgG~I~~~~~~~-~~ 333 (385)
..+ +++|+++|+++|+++++|++| .++...+..+.++. +.| +++.|+||++ +|.|.|+++++++.. ..
T Consensus 207 ~~~~~~l~~i~~~~~~~~~~~i~Deay-~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~ 285 (427)
T 3dyd_A 207 VFSKRHLQKILAVAARQCVPILADEIY-GDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG 285 (427)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEECTT-TTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEcCc-hhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhH
Confidence 667 999999999999999999998 45544443222222 222 6788999984 678889999886311 00
Q ss_pred hHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 334 ~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
.++.+.+...... ..+++....+++..+|+.
T Consensus 286 ~~i~~~l~~~~~~--~~~~~~~~~~a~~~~L~~ 316 (427)
T 3dyd_A 286 NEIRDGLVKLSQR--ILGPCTIVQGALKSILCR 316 (427)
T ss_dssp HHHHHHHHHHHHH--HCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--cCCCCHHHHHHHHHHHHh
Confidence 1355444332211 134666667777777764
No 79
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.79 E-value=6.8e-18 Score=166.36 Aligned_cols=207 Identities=13% Similarity=0.110 Sum_probs=142.6
Q ss_pred cccccC--CCCCcHHHHHHHhhHhhccC---CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH
Q 016668 105 LELIAS--ENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (385)
Q Consensus 105 l~Lias--en~~s~~V~~al~s~l~~~y---~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~ 179 (385)
+++... ...+++.|.+++...+.+.. ..+|+. ..|.+ ++++..++++.+.+|.+.+ ....+.+.+|++
T Consensus 38 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~---~~g~~---~lr~~la~~l~~~~g~~~~-~~~i~~~~g~~~ 110 (398)
T 3ele_A 38 YDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS---AQGDV---ETRAAIAEFLNNTHGTHFN-ADNLYMTMGAAA 110 (398)
T ss_dssp EECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC---TTCCH---HHHHHHHHHHHHHHCCCCC-GGGEEEESSHHH
T ss_pred EEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC---CCCcH---HHHHHHHHHHHHHhCCCCC-hHHEEEccCHHH
Confidence 555433 23467999999987775421 123432 12433 6777788888888885421 112344445577
Q ss_pred HHHHHHHHhccCC-CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 180 ANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 180 A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
|+..++.++++|| |+|++.+|.|.++.. .+...|..+..+ +++++++.+|++++++.+++ ++++|+++
T Consensus 111 al~~~~~~l~~~g~d~vl~~~p~~~~~~~--------~~~~~g~~~~~v--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 179 (398)
T 3ele_A 111 SLSICFRALTSDAYDEFITIAPYFPEYKV--------FVNAAGARLVEV--PADTEHFQIDFDALEERINA-HTRGVIIN 179 (398)
T ss_dssp HHHHHHHHHCCSTTCEEEEESSCCTHHHH--------HHHHTTCEEEEE--CCCTTTSSCCHHHHHHTCCT-TEEEEEEC
T ss_pred HHHHHHHHHcCCCCCEEEEeCCCchhhHH--------HHHHcCCEEEEE--ecCCcCCcCCHHHHHHHhCc-CCCEEEEc
Confidence 9999999999999 999999987655421 234566654444 45555668999999999865 78999887
Q ss_pred CCCCC--CCCC---HHHHHHHHHH------cCcEEEEeccccccccccC-cccCCCC--CCcEEEECCCccC--ccccEE
Q 016668 259 ASAYP--RDFD---YPRMRQIADA------VGALLMMDMAHISGLVAAS-VVADPFK--YCDVVTTTTHKSL--RGPRGG 322 (385)
Q Consensus 259 ~s~~~--~~~d---l~~I~~ia~~------~ga~livD~ah~~Gli~~g-~~~~p~~--gaDiv~~S~hK~l--~GprgG 322 (385)
.++|| ...+ +++|+++|++ +|+++|+|++|. ++...+ ..+...+ +.++++.|+||++ +|.|.|
T Consensus 180 ~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 258 (398)
T 3ele_A 180 SPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYR-EIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIG 258 (398)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTT-TCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEecccc-ccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeE
Confidence 77765 4556 6777899999 999999999984 444433 2222222 3458899999997 677889
Q ss_pred EEEEeCCC
Q 016668 323 MIFFKKDP 330 (385)
Q Consensus 323 ~I~~~~~~ 330 (385)
+++++++.
T Consensus 259 ~~~~~~~~ 266 (398)
T 3ele_A 259 YVLVPDEV 266 (398)
T ss_dssp EEECCTTS
T ss_pred EEEEcchh
Confidence 99998863
No 80
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.79 E-value=1.1e-18 Score=175.87 Aligned_cols=255 Identities=13% Similarity=0.121 Sum_probs=165.7
Q ss_pred CChHHHHHHHHHHHH-------h-hhccccccC--CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHH
Q 016668 86 ADPEVCEIITKEKER-------Q-FKSLELIAS--ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQK 155 (385)
Q Consensus 86 ~dp~~~~~i~~e~~~-------~-~~~l~Lias--en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~ 155 (385)
+++.++..+.+.... . ..-++|..+ +..+++.+.+++...+.+....+|+. ..|.+ ++++.+.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~---~lr~~ia~ 106 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSP---TRGRP---SLINSLIK 106 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGSCCC---TTCCH---HHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCCCCC---CCCCH---HHHHHHHH
Confidence 666677666654422 1 234555433 23357999999987765311223443 12433 67777777
Q ss_pred HHHHHcCCCCCCCcceeecCC-cHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC
Q 016668 156 RALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES 234 (385)
Q Consensus 156 ~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~ 234 (385)
++.+.+|.+.+ +. +|.+++ |++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++++
T Consensus 107 ~l~~~~g~~~~-~~-~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~ 174 (447)
T 3b46_A 107 LYSPIYNTELK-AE-NVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIP--------NIELCGGKVVYVP--INPP 174 (447)
T ss_dssp HHTTTTTSCCC-GG-GEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HHHHTTCEEEEEE--EECC
T ss_pred HHHHhcCCCCC-hh-hEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEEEe--CCCc
Confidence 77777886532 11 344555 5679999999999999999999987655421 3345676555554 4333
Q ss_pred -----------CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 235 -----------TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 235 -----------~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
++.+|+++|++.++. ++|+|+++.++|| ... ++++|+++|+++|++||+|++|. ++..++..
T Consensus 175 ~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~ 252 (447)
T 3b46_A 175 KELDQRNTRGEEWTIDFEQFEKAITS-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYE-HLYFTDSF 252 (447)
T ss_dssp GGGGTSCBCSTTSEECHHHHHTTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCBCSSCC
T ss_pred cccccccccccCcccCHHHHHHhhcc-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccch-hcccCCCC
Confidence 357999999998864 7899988877765 333 58999999999999999999984 44444321
Q ss_pred cC--CC----CCCcEEEECCCccC--ccccEEEEEE-eCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 299 AD--PF----KYCDVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 299 ~~--p~----~gaDiv~~S~hK~l--~GprgG~I~~-~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
++ .+ .+.|+++.|+||+| +|+|.|++++ ++ ++.+.+.........+ ++....++++.+|+..
T Consensus 253 ~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~------~l~~~l~~~~~~~~~~-~~~~~~~a~~~aL~~~ 323 (447)
T 3b46_A 253 TRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNA------ELLSYAAKAHTRICFA-SPSPLQEACANSINDA 323 (447)
T ss_dssp CCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCH------HHHHHHHHHHHHHTSS-CCHHHHHHHHHHHHHH
T ss_pred cCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCH------HHHHHHHHHHhhccCC-CChHHHHHHHHHHhCC
Confidence 11 12 15689999999998 5788999999 65 5666665432111122 3344455556677654
No 81
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.79 E-value=7.3e-19 Score=173.39 Aligned_cols=209 Identities=13% Similarity=0.067 Sum_probs=143.1
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.+++.|++++...+.+....+|+. ..|.. ++++.+++++++++|.+.+.....+.+++|+.|+..++.++++||
T Consensus 53 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~---~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~~g 126 (407)
T 3nra_A 53 EPTPGAFDLFSAGVQSGGVQAYTE---YRGDL---GIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVARG 126 (407)
T ss_dssp CCCTTHHHHHHHHHHHTHHHHSCC---TTCCH---HHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCCTT
T ss_pred CCcHHHHHHHHHHHhcCCCCCcCC---CCCCH---HHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCCCC
Confidence 467888888887765422223332 12333 677777888999999853100013445556779999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccc---cCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL---DESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD 267 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~---~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d 267 (385)
|+|++.++.|.++.. .+...|..+..+++.. +++++.+|++++++.+++ ++++|++..+++| ...+
T Consensus 127 d~vl~~~~~~~~~~~--------~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~p~nptG~~~~ 197 (407)
T 3nra_A 127 DKVAIVQPDYFANRK--------LVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA-GARVFLFSNPNNPAGVVYS 197 (407)
T ss_dssp CEEEEEESCCTHHHH--------HHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT-TCCEEEEESSCTTTCCCCC
T ss_pred CEEEEcCCcccchHH--------HHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh-CCcEEEEcCCCCCCCcccC
Confidence 999999887654421 3445676555555321 124678999999999976 7898887777765 4566
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-------CCcEEEECCCccC--ccccEEEEEEeCCCCchhH
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-------YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-------gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~ 335 (385)
+++|+++|+++|+++++|++|..+ ..++....++. +.++++.|+||++ +|.|.|++++++ +
T Consensus 198 ~~~l~~i~~~~~~~~~~li~Dea~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------~ 270 (407)
T 3nra_A 198 AEEIGQIAALAARYGATVIADQLYSRL-RYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR------A 270 (407)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTS-BCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccccc-ccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH------H
Confidence 899999999999999999998543 33332222221 2458899999997 477889999876 5
Q ss_pred HHHHHhhc
Q 016668 336 LESAINNA 343 (385)
Q Consensus 336 ~~~~i~~~ 343 (385)
+.+.+...
T Consensus 271 ~~~~l~~~ 278 (407)
T 3nra_A 271 IIARMEKL 278 (407)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666543
No 82
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.79 E-value=1.2e-18 Score=172.65 Aligned_cols=238 Identities=16% Similarity=0.020 Sum_probs=151.2
Q ss_pred ccccccCCC-----CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH
Q 016668 104 SLELIASEN-----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS 178 (385)
Q Consensus 104 ~l~Liasen-----~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs 178 (385)
-+++...++ ..++.+.+++...+.+.. .+|+.. .|. .++++.+.+++.+.+|...+ ....+.+.+|+
T Consensus 40 ~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~y~~~---~g~---~~l~~~la~~l~~~~g~~~~-~~~v~~t~g~~ 111 (406)
T 1xi9_A 40 VIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-NYYGDS---EGL---PELRKAIVEREKRKNGVDIT-PDDVRVTAAVT 111 (406)
T ss_dssp CEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-CSCCCT---TCC---HHHHHHHHHHHHHHHCCCCC-GGGEEEESHHH
T ss_pred EEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-CCCCCC---CCc---HHHHHHHHHHHHHhcCCCCC-HHHEEEcCChH
Confidence 355554444 457899999987775422 234331 233 37887778888887775431 11234444557
Q ss_pred HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEE
Q 016668 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIA 257 (385)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~ 257 (385)
+|+..++.++++|||+|++.++.|.++.. .+...|..+..++ +++ +++.+|+++|++.+++ ++++|++
T Consensus 112 ~al~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~i 180 (406)
T 1xi9_A 112 EALQLIFGALLDPGDEILVPGPSYPPYTG--------LVKFYGGKPVEYR--TIEEEDWQPDIDDIRKKITD-RTKAIAV 180 (406)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEE--EEGGGTSEECHHHHHHHCCT-TEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCccHHH--------HHHHcCCEEEEee--cCCCcCCcCCHHHHHHhhCc-CceEEEE
Confidence 79999999999999999999987654321 2345666555444 443 2456899999999965 6888888
Q ss_pred cCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccC--CC-CCC-cEEEECCCccC--ccccEEEEE-
Q 016668 258 GASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--PF-KYC-DVVTTTTHKSL--RGPRGGMIF- 325 (385)
Q Consensus 258 ~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--p~-~ga-Div~~S~hK~l--~GprgG~I~- 325 (385)
..+++| ...+ +++|.++|+++|++||+|++|..+ ..++..++ .+ .+. |++++|+||++ +|+|.|+++
T Consensus 181 ~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (406)
T 1xi9_A 181 INPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLM-TYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYF 259 (406)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTC-BSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEE
T ss_pred ECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCcccc-ccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEE
Confidence 766655 4444 899999999999999999998543 33322111 11 245 78899999998 477789888
Q ss_pred -EeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 326 -FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 326 -~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
.+++. ..++.+.+....... .+++....+++..+++
T Consensus 260 ~~~~~~--~~~l~~~l~~~~~~~--~~~~~~~~~a~~~~l~ 296 (406)
T 1xi9_A 260 VDPENK--LSEVREAIDRLARIR--LCPNTPAQFAAIAGLT 296 (406)
T ss_dssp ECTTCT--THHHHHHHHHHHHHT--CCSCSHHHHHHHHHHH
T ss_pred ecCchh--HHHHHHHHHHHHHhh--cCCCHHHHHHHHHHHh
Confidence 66510 002444443322111 2334444555566664
No 83
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.79 E-value=1.1e-17 Score=171.60 Aligned_cols=222 Identities=11% Similarity=0.032 Sum_probs=153.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCC--CCCcceeecCCcHHHHHHHHHHhccCC--------CEEeecCCCCCccccCCccc
Q 016668 143 NEYIDELETLCQKRALAAFNLDE--NKWGVNVQPLSGSPANFEVYTAILKPH--------DRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 143 ~~~~~~le~~~~~~la~lfg~~~--~~~~~~V~~~sGs~A~~~a~~all~pG--------D~Vl~~~~~~ggh~s~~~~~ 212 (385)
.+...++|+.+++++++++|.+. +.. ..+.+++|++|+..++.++.++| |+|++..+.|.++.
T Consensus 134 ~p~~~~le~~l~~~la~~~g~~~~~~~v-~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~------ 206 (514)
T 3mad_A 134 WPSTAKFEAEVVAMTAHMLGGDAAGGTV-CGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD------ 206 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTGGGGTSCC-EEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH------
T ss_pred ChHHHHHHHHHHHHHHHHcCCCCccCCc-ceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH------
Confidence 34556888888999999999983 111 12566778889999999998877 99999988665432
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
+.+...|..+..++ +++ ++.+|+++|++.+++ ++++|+++.+++ |...|+++|.++|+++|++|++|++|+.
T Consensus 207 --~~~~~~G~~v~~v~--~~~-~~~~d~~~Le~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~ 280 (514)
T 3mad_A 207 --KAAQYFGIKLVRTP--LDA-DYRADVAAMREAITP-NTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGG 280 (514)
T ss_dssp --HHHHHHTCEEEEEC--BCT-TSCBCHHHHHHHCCT-TEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred --HHHHHcCCeeEEee--eCC-CCCCCHHHHHHHhcc-CCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEeccccc
Confidence 23445676555555 553 678999999999965 789988877765 5678999999999999999999999864
Q ss_pred cccc----cCc--ccCCC--CCCcEEEECCCccCccc-cEEEEEEeCCCCchhHHHHHHh---------hccCCCccCCC
Q 016668 291 GLVA----ASV--VADPF--KYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAIN---------NAVFPGLQGGP 352 (385)
Q Consensus 291 Gli~----~g~--~~~p~--~gaDiv~~S~hK~l~Gp-rgG~I~~~~~~~~~~~~~~~i~---------~~~fp~~qg~p 352 (385)
+... .|. .+..+ .++|++++|+||++.|+ +.|+++++++ .+..... ....+...|++
T Consensus 281 ~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~gs~ 355 (514)
T 3mad_A 281 FILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRP-----DLLHYQYFIAADWPGGLYFSPTFAGSR 355 (514)
T ss_dssp TTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSH-----HHHTTTCEEESSCTTCSEEESSSCSSC
T ss_pred ccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCH-----HHhccccccccccCCCcccCCccCCCC
Confidence 4321 121 11111 27899999999996555 5688888874 2222110 01123345666
Q ss_pred hHHHHHHHHHHHHHhhCchHHHHHHHHhcc
Q 016668 353 HNHTIGGLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 353 ~~~~iaala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
....++++.++++.+...++++..+++.++
T Consensus 356 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~ 385 (514)
T 3mad_A 356 PGALSATAWAAMLSLGEEGYLDATRRILQA 385 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 667677777777766555556555555443
No 84
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.79 E-value=3.4e-18 Score=164.34 Aligned_cols=227 Identities=16% Similarity=0.169 Sum_probs=149.4
Q ss_pred HHHHHHhhhccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCccee
Q 016668 95 TKEKERQFKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNV 172 (385)
Q Consensus 95 ~~e~~~~~~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V 172 (385)
+++....+..|+|-..+|+ +++.|++++...+.. ..+||. +...++ ++.+++++|++.+ +|
T Consensus 9 ~~~~~~~~~~i~l~~n~~~~~~~~~v~~a~~~~~~~--~~~y~~-------~~~~~l----r~~la~~~~~~~~----~i 71 (337)
T 3p1t_A 9 DTEVRAAAQAVCLAFNENPEAVEPRVQAAIAAAAAR--INRYPF-------DAEPRV----MRKLAEHFSCPED----NL 71 (337)
T ss_dssp -----CCCCCEECSSCCCCSCCCHHHHHHHHHHGGG--TTSCCT-------THHHHH----HHHHHHHHTSCGG----GE
T ss_pred cccccCCCCceEeeCCCCCCCCCHHHHHHHHHhhhh--hccCCC-------CchHHH----HHHHHHHhCcCHH----HE
Confidence 3343444466788777775 589999999876543 123432 222344 4567888998764 45
Q ss_pred ecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcC
Q 016668 173 QPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR 251 (385)
Q Consensus 173 ~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~ 251 (385)
.+++|+ +++..++.++ |||+|++.+|.|.++.. .+...|..+. +++++ +++.+|++++++. .+
T Consensus 72 ~~t~G~~~~l~~~~~~~--~gd~vl~~~p~~~~~~~--------~~~~~g~~~~--~v~~~-~~~~~d~~~l~~~---~~ 135 (337)
T 3p1t_A 72 MLVRGIDECFDRISAEF--SSMRFVTAWPGFDGYRA--------RIAVSGLRHF--EIGLT-DDLLLDPNDLAQV---SR 135 (337)
T ss_dssp EEESHHHHHHHHHHHHS--TTSEEEEESSSCSHHHH--------HHTTSCCEEE--EECBC-TTSSBCHHHHTTC---CT
T ss_pred EEeCCHHHHHHHHHHhc--CCCeEEEeCCCcHHHHH--------HHHHcCCEEE--EecCC-CCCCCCHHHHHhh---cC
Confidence 566665 5877777776 99999999987655421 3345666544 44454 3568999999875 26
Q ss_pred CcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccC--ccccEEEEEEe
Q 016668 252 PKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 252 pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l--~GprgG~I~~~ 327 (385)
+++|++..++|| ...+++++.++|++++. +++|++|. ++...+.......+.++++.|+||++ +|+|.|+++++
T Consensus 136 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-~ivDea~~-~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~ 213 (337)
T 3p1t_A 136 DDCVVLANPSNPTGQALSAGELDQLRQRAGK-LLIDETYV-DYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGP 213 (337)
T ss_dssp TEEEEEESSCTTTCCCCCHHHHHHHHHHCSE-EEEECTTG-GGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECC
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc-EEEECCCh-hhccccccccccCCCEEEEeeCchhccCcchheEEEEeC
Confidence 789888877765 68899999999999997 56699984 33322211111124578999999998 57888999987
Q ss_pred CCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+ ++.+.+.....+ .+++....+++..+++
T Consensus 214 ~------~~~~~l~~~~~~---~~~~~~~~~a~~~~l~ 242 (337)
T 3p1t_A 214 S------ELIAAMKRKQWF---CNVGTLDLHALEAALD 242 (337)
T ss_dssp H------HHHHHHHTTSCT---TCSCHHHHHHHHHHHT
T ss_pred H------HHHHHHHhhcCC---CCCCHHHHHHHHHHhC
Confidence 7 677777664332 2455555555555554
No 85
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.79 E-value=5.8e-18 Score=166.57 Aligned_cols=234 Identities=13% Similarity=0.093 Sum_probs=153.5
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHH-HHHHHHHHHHHHcC--CCCCCCcceeecCCcH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDE-LETLCQKRALAAFN--LDENKWGVNVQPLSGS 178 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~-le~~~~~~la~lfg--~~~~~~~~~V~~~sGs 178 (385)
-+++...++ .+++.|.+++...+... ..+|+. + ..+ +++..++++.+.+| ++.+ ..+.+++|+
T Consensus 30 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-----~---~~~~lr~~la~~l~~~~g~~~~~~---~v~~t~g~~ 97 (390)
T 1d2f_A 30 LLPFTISDMDFATAPCIIEALNQRLMHG-VFGYSR-----W---KNDEFLAAIAHWFSTQHYTAIDSQ---TVVYGPSVI 97 (390)
T ss_dssp CEECCSSSCSSCCCHHHHHHHHHHHTTC-CCCCCC-----S---CCHHHHHHHHHHHHHHSCCCCCGG---GEEEESCHH
T ss_pred eeEeeecCCCCCCCHHHHHHHHHHHhCC-CCCCCC-----C---ChHHHHHHHHHHHHHhcCCCCCHH---HEEEcCCHH
Confidence 355543333 46899999998876432 223433 1 236 77777888888888 4442 223444556
Q ss_pred HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC--CCCCCHHHHHHHhhhcCCcEEE
Q 016668 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLII 256 (385)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~--~~~iD~d~le~~i~~~~pklIi 256 (385)
+|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++++ ++.+|+++|++.++..++|+|+
T Consensus 98 ~al~~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~~d~~~l~~~l~~~~~~~v~ 167 (390)
T 1d2f_A 98 YMVSELIRQWSETGEGVVIHTPAYDAFYK--------AIEGNQRTVMPVA--LEKQADGWFCDMGKLEAVLAKPECKIML 167 (390)
T ss_dssp HHHHHHHHHSSCTTCEEEEEESCCHHHHH--------HHHHTTCEEEEEE--CEECSSSEECCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCcHHHHH--------HHHHCCCEEEEee--cccCCCccccCHHHHHHHhccCCCeEEE
Confidence 79999999999999999999887655321 2345566555454 4322 2358999999998654789888
Q ss_pred EcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCC---CC-CC-cEEEECCCccC--ccccEEEE
Q 016668 257 AGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADP---FK-YC-DVVTTTTHKSL--RGPRGGMI 324 (385)
Q Consensus 257 ~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p---~~-ga-Div~~S~hK~l--~GprgG~I 324 (385)
+..+++| ...+ +++|.++|+++|++||+|++|.. +...|..+.+ +. .. |+ +.|+||++ +|.|.|++
T Consensus 168 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~ 245 (390)
T 1d2f_A 168 LCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMD-MVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYG 245 (390)
T ss_dssp EESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTT-CBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEE
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEE
Confidence 7766665 3444 89999999999999999999854 3333322212 22 22 77 99999997 57788999
Q ss_pred EEeCCCCchhHHHHHHhhccC-CCccCCChHHHHHHHHHHHHH
Q 016668 325 FFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~f-p~~qg~p~~~~iaala~Al~e 366 (385)
+++++ ++.+.+..... ....++++....++...+++.
T Consensus 246 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 283 (390)
T 1d2f_A 246 IIENS-----SSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQ 283 (390)
T ss_dssp EECSH-----HHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH
T ss_pred EECCH-----HHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhc
Confidence 98653 56666654432 122234555555555566654
No 86
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.79 E-value=5e-19 Score=175.89 Aligned_cols=261 Identities=13% Similarity=0.068 Sum_probs=160.5
Q ss_pred hhcccCChHHHHHHHHHHHHh--hhccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQ--FKSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKR 156 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~--~~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~ 156 (385)
+++..+.++.+..+.+...+. +.-+++...++. .++.|.+++...+......+|+.. .|.+ ++++.+.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~---~lr~~ia~~ 97 (404)
T 2o1b_A 24 NKLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGAF---HGKE---AFKQAIVDF 97 (404)
T ss_dssp HHHHTSCCCTTC-------CCCSSCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCCT---TCCH---HHHHHHHHH
T ss_pred hHhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCCC---CCCH---HHHHHHHHH
Confidence 344555554443333322211 123566544443 478999998877643211234331 2333 788777788
Q ss_pred HHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 157 ALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 157 la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
+.+.+|.+.+.....+++++|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ .++++.
T Consensus 98 ~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~ 167 (404)
T 2o1b_A 98 YQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA--------GVLLADGKPVPLN--LEPPHY 167 (404)
T ss_dssp HHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHH--------HHHHTTCEEEEEE--CCTTTC
T ss_pred HHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH--------HHHHCCCEEEEec--cCcccC
Confidence 888889862100012444555679999999999999999999987655421 2345566544444 543344
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-----CCc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-----YCD 306 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-----gaD 306 (385)
.+|+++|++.++. ++|+|++..++|| ...+ +++|.++|+++|++||+|++|.. +...+...+.+. +.|
T Consensus 168 ~~d~~~l~~~l~~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~ 245 (404)
T 2o1b_A 168 LPDWSKVDSQIID-KTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGA-FGFDAKNPSILASENGKDVA 245 (404)
T ss_dssp CCCGGGSCHHHHH-HEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTT-CBSSSCCCCGGGSTTHHHHE
T ss_pred cCCHHHHHHhhcc-CceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchh-cccCCCCCChhhcCCCCCCE
Confidence 6899999988864 6899988766665 4443 78899999999999999999854 333332222221 235
Q ss_pred EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 307 VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 307 iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++++|+||+| +|+|.|++++++ ++.+++........ .+++....++...+++.
T Consensus 246 i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~ 300 (404)
T 2o1b_A 246 IEIYSLSKGYNMSGFRVGFAVGNK------DMIQALKKYQTHTN-AGMFGALQDAAIYALNH 300 (404)
T ss_dssp EEEEESTTTTTCGGGCCEEEEECH------HHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHH
T ss_pred EEEEecchhccCchhheEeEecCH------HHHHHHHHHHhhcc-CCCCHHHHHHHHHHHhc
Confidence 8899999998 577889999876 56666654322211 23445555555666654
No 87
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.79 E-value=3.5e-19 Score=190.64 Aligned_cols=216 Identities=15% Similarity=0.089 Sum_probs=146.4
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccc-cccCcceEEEEecc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYR 230 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~i~~~ 230 (385)
++++++++||++. .+.+++|+ .||.+++.++++|||+|++..+.|.++.. . +.+.|..+..++..
T Consensus 178 ~e~~lA~~~gae~-----~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~--------~~~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 178 AEKHAARVYNADK-----TYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYN--------SALAMAGGRPVYLQTN 244 (730)
T ss_dssp HHHHHHHHTTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH--------HHTTTTCCEEEEECEE
T ss_pred HHHHHHHHHCCCc-----EEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHH--------HHHHHCCCEEEEEeCC
Confidence 5668999999986 35567776 69999999999999999999986654321 2 34567655544432
Q ss_pred ccCC--CCCCCHHHH-----HHHhhhc--------CC-cEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEecccccccc
Q 016668 231 LDES--TGLVDYDML-----EKTAILF--------RP-KLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (385)
Q Consensus 231 ~~~~--~~~iD~d~l-----e~~i~~~--------~p-klIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli 293 (385)
.+.- .+.+|+++| ++.+++. +| |+|+++.++ +|...|+++|+++|+++|++|++|++|+.++.
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~ 324 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQ 324 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGG
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECCCCCCeecCHHHHHHHHHHcCCeEEEEcccccccc
Confidence 2100 123677777 8888653 12 888776554 46778999999999999999999999976655
Q ss_pred ccCccc--CCCC----CCc----EEEECCCccCcccc-EEEEEEeCCCC-c---hhHHHHHHhhccCCCccCCChHHHHH
Q 016668 294 AASVVA--DPFK----YCD----VVTTTTHKSLRGPR-GGMIFFKKDPV-L---GVELESAINNAVFPGLQGGPHNHTIG 358 (385)
Q Consensus 294 ~~g~~~--~p~~----gaD----iv~~S~hK~l~Gpr-gG~I~~~~~~~-~---~~~~~~~i~~~~fp~~qg~p~~~~ia 358 (385)
+.+..+ ++++ ++| ++++|+||+|+||+ ||+|+++++.+ . ..+ ..+++........++|+...++
T Consensus 325 f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i~-~~~~~~~~~~~~stsp~~~~ia 403 (730)
T 1c4k_A 325 FIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYCD-HKHFNNSFNLFMSTSPFYPMYA 403 (730)
T ss_dssp SSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCCC-HHHHHHHHHHHSCSSCCHHHHH
T ss_pred cCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCcccccC-HHHHHHHHHHhCCCCCcHHHHH
Confidence 433221 3332 677 99999999999987 47777776421 0 001 1233333222234678999999
Q ss_pred HHHHHHHHhhCchHHHHHHHHhcc
Q 016668 359 GLAVCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 359 ala~Al~e~~~~~~~~y~~~v~~~ 382 (385)
++.+|++.+..++..++.++++++
T Consensus 404 al~aA~~~l~~~~g~~~~~~~~~~ 427 (730)
T 1c4k_A 404 ALDVNAAMQEGEAGRKLWHDLLIT 427 (730)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHH
Confidence 999999876553445555555543
No 88
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.79 E-value=2.5e-18 Score=170.47 Aligned_cols=200 Identities=20% Similarity=0.161 Sum_probs=143.1
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEV 184 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a 184 (385)
+++..+++..++.|++++...+... . |..+ +...++ ++.+++++|.+. .+.+++|+.|+..+
T Consensus 33 id~~~~~~~~~~~v~~a~~~~~~~~---~-----y~~~-~~~~~l----~~~la~~~~~~~-----~v~~~~Gt~a~~~~ 94 (399)
T 2oga_A 33 LDLKAAYEELRAETDAAIARVLDSG---R-----YLLG-PELEGF----EAEFAAYCETDH-----AVGVNSGMDALQLA 94 (399)
T ss_dssp CCHHHHHHHTHHHHHHHHHHHHHHT---C-----CSSS-HHHHHH----HHHHHHHTTSSE-----EEEESCHHHHHHHH
T ss_pred cccCcCCCCCCHHHHHHHHHHHhcC---C-----CCCc-hhHHHH----HHHHHHHHCCCe-----EEEecCHHHHHHHH
Confidence 4555555555688999988776531 1 2112 333344 456888999874 47788999999999
Q ss_pred HHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 016668 185 YTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP 263 (385)
Q Consensus 185 ~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~ 263 (385)
+.++ ++|||+|+++++.|.++.. .+...|..+..++ ++++++.+|++++++.+++ ++++|++++ .+|
T Consensus 95 l~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~~~~~d~~~l~~~i~~-~~~~v~~~n-~tG 162 (399)
T 2oga_A 95 LRGLGIGPGDEVIVPSHTYIASWL--------AVSATGATPVPVE--PHEDHPTLDPLLVEKAITP-RTRALLPVH-LYG 162 (399)
T ss_dssp HHHTTCCTTCEEEEESSSCTHHHH--------HHHHTTCEEEEEC--BCSSSSSBCHHHHHHHCCT-TEEEECCBC-GGG
T ss_pred HHHhCCCCcCEEEECCCccHHHHH--------HHHHCCCEEEEEe--cCCCCCCcCHHHHHHhcCC-CCeEEEEeC-CcC
Confidence 9999 9999999999987655321 3345676554444 5544678999999999865 688887643 356
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCC--ccCccc-cEEEEEEeCCCCchhHHHHH
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGP-RGGMIFFKKDPVLGVELESA 339 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~h--K~l~Gp-rgG~I~~~~~~~~~~~~~~~ 339 (385)
...|+++|.++|+++|+++|+|++|..|....+. ++. ..|++++|+| |++.+| +||+++++++ ++.++
T Consensus 163 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~-----~~~~~ 234 (399)
T 2oga_A 163 HPADMDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDP-----ELAER 234 (399)
T ss_dssp CCCCHHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTTCEEEEECCTTSSSCCSSCCEEEEESCH-----HHHHH
T ss_pred CccCHHHHHHHHHHcCCEEEEECcccccCccCCe---ecccccCEEEEeCCCCccCCcCCceEEEEeCCH-----HHHHH
Confidence 7789999999999999999999999766443221 122 3699999995 998553 8899998754 66666
Q ss_pred Hhh
Q 016668 340 INN 342 (385)
Q Consensus 340 i~~ 342 (385)
+..
T Consensus 235 l~~ 237 (399)
T 2oga_A 235 LRM 237 (399)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 89
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.79 E-value=3.5e-18 Score=172.52 Aligned_cols=199 Identities=8% Similarity=0.018 Sum_probs=139.1
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCC--CcceeecCCcHHHHHHHHHHhc
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK--WGVNVQPLSGSPANFEVYTAIL 189 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~--~~~~V~~~sGs~A~~~a~~all 189 (385)
.+.++.+.+++.+.+..... . +...+...++|+.+++++++++|++.+. ....+.+.+||+||..++.++.
T Consensus 52 ~~~~~~v~e~~~~a~~~~~~-~------~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~ 124 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINKNWI-D------KEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMK 124 (452)
T ss_dssp CCCCHHHHHHHHHTTTCBTT-C------TTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhccCCC-C------hhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHH
Confidence 45678899988766542211 1 1123455689999999999999998642 1113566778889999988876
Q ss_pred c--------CC-----CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEE
Q 016668 190 K--------PH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (385)
Q Consensus 190 ~--------pG-----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi 256 (385)
+ +| |+|++++ .| .++. +.+...|..+..+ +++++++.+|+++|++.+++ +|++|+
T Consensus 125 ~~~~~~~~~~G~~~~~~~vi~~~-~h---~~~~-----~~~~~~G~~v~~v--~~~~~~~~~d~~~l~~~i~~-~t~~v~ 192 (452)
T 2dgk_A 125 WRWRKRMEAAGKPTDKPNLVCGP-VQ---ICWH-----KFARYWDVELREI--PMRPGQLFMDPKRMIEACDE-NTIGVV 192 (452)
T ss_dssp HHHHHHHHHTTCCCSCCEEEESS-CC---HHHH-----HHHHHTTCEEEEC--CCBTTBCSCCHHHHHHHCCT-TEEEEE
T ss_pred HHHHHHHHhcCCCCCCcEEEECC-Cc---HHHH-----HHHHHcCceEEEE--ecCCCCCeECHHHHHHHHhh-CCEEEE
Confidence 4 66 5888876 44 2221 2345667754444 45544689999999999965 688888
Q ss_pred EcCCCC--CCCCCHHHHHHHHHHc------CcEEEEecccccccc--ccCcccCC--CCCCcEEEECCCccCcc-ccEEE
Q 016668 257 AGASAY--PRDFDYPRMRQIADAV------GALLMMDMAHISGLV--AASVVADP--FKYCDVVTTTTHKSLRG-PRGGM 323 (385)
Q Consensus 257 ~~~s~~--~~~~dl~~I~~ia~~~------ga~livD~ah~~Gli--~~g~~~~p--~~gaDiv~~S~hK~l~G-prgG~ 323 (385)
+..+++ |...|+++|.++|+++ |+++++|++|+.+.. ..+..+.. +.++|++++++||++.+ ++.|+
T Consensus 193 ~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~ 272 (452)
T 2dgk_A 193 PTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGW 272 (452)
T ss_dssp CBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEE
T ss_pred EEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEE
Confidence 776654 5678999999999996 999999999865532 12211222 23789999999998744 56799
Q ss_pred EEEeCC
Q 016668 324 IFFKKD 329 (385)
Q Consensus 324 I~~~~~ 329 (385)
++++++
T Consensus 273 ~~~~~~ 278 (452)
T 2dgk_A 273 VIWRDE 278 (452)
T ss_dssp EEESSG
T ss_pred EEEcCH
Confidence 999764
No 90
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.79 E-value=5.8e-18 Score=167.65 Aligned_cols=196 Identities=15% Similarity=0.157 Sum_probs=140.4
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKP 191 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~p 191 (385)
..++.+++++...+.+.|. +. .| +...+++ +.+++++|.+. .+.+.||+.|+..++.++ ++|
T Consensus 9 ~~~~~v~~a~~~~~~~~~~---~~----~g-~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~~~~l~~~~ 71 (394)
T 1o69_A 9 HMGGNELKYIEEVFKSNYI---AP----LG-EFVNRFE----QSVKDYSKSEN-----ALALNSATAALHLALRVAGVKQ 71 (394)
T ss_dssp ---CCHHHHHHHHHHHTTT---SC----TT-HHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCCT
T ss_pred CCCHHHHHHHHHHHHcCCc---cC----CC-hHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCCCC
Confidence 4567788888777754331 10 13 3333444 56888889853 366778889999999999 999
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCCCCCHH
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRDFDYP 269 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~~~~dl~ 269 (385)
||+|+++++.|.++.. .+...|..+..++ ++ +++.+|++++++.+++. ++++|++.+ .+|...|++
T Consensus 72 gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~~~v~~~~-~~G~~~~l~ 139 (394)
T 1o69_A 72 DDIVLASSFTFIASVA--------PICYLKAKPVFID--CD-ETYNIDVDLLKLAIKECEKKPKALILTH-LYGNAAKMD 139 (394)
T ss_dssp TCEEEEESSSCGGGTH--------HHHHTTCEEEEEC--BC-TTSSBCHHHHHHHHHHCSSCCCEEEEEC-GGGCCCCHH
T ss_pred CCEEEECCCccHHHHH--------HHHHcCCEEEEEE--eC-CCCCcCHHHHHHHHhcccCCceEEEEEC-CCCChhhHH
Confidence 9999999987765421 3345676544444 55 46789999999998753 689888765 466778999
Q ss_pred HHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 270 ~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+|.++|+++|+++++|++|+.|+...+.....+..+|+.++|.||.++|+++|+++++++ ++.+++..
T Consensus 140 ~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~-----~l~~~l~~ 207 (394)
T 1o69_A 140 EIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNK-----EKIEKARF 207 (394)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCH-----HHHHHHHH
Confidence 999999999999999999987776544321123356788888899998889999999643 56666654
No 91
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.79 E-value=1.2e-18 Score=173.12 Aligned_cols=234 Identities=18% Similarity=0.090 Sum_probs=151.2
Q ss_pred hccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 103 ~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
.-++|...++ ..++.+.+++ ..+.+. ..+|+.. .|. .++++.+.+++.+.+|.+.. ....+.+.+|++|
T Consensus 44 ~~i~l~~~~~~~~~~~~v~~a~-~~l~~~-~~~y~~~---~g~---~~l~~~la~~~~~~~g~~~~-~~~v~~~~g~t~a 114 (409)
T 2gb3_A 44 RIHHLNIGQPDLKTPEVFFERI-YENKPE-VVYYSHS---AGI---WELREAFASYYKRRQRVDVK-PENVLVTNGGSEA 114 (409)
T ss_dssp EEEECSSCCCCSCCCTHHHHHH-HHTCCS-SCCCCCT---TCC---HHHHHHHHHHHHHTSCCCCC-GGGEEEESHHHHH
T ss_pred CEEeccCCCCCCCCCHHHHHHH-HHHhcC-CCCCCCC---CCc---HHHHHHHHHHHHHHhCCCCC-HHHEEEeCCHHHH
Confidence 3456654444 3578999999 776432 2234331 233 37777777777777775431 1123445567789
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+..++.++++|||+|++.++.|.++.. .+...|..+..++ .++ ++..+ +++|++.+++ ++++|++..
T Consensus 115 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~-~~~l~~~l~~-~~~~v~~~~ 182 (409)
T 2gb3_A 115 ILFSFAVIANPGDEILVLEPFYANYNA--------FAKIAGVKLIPVT--RRMEEGFAI-PQNLESFINE-RTKGIVLSN 182 (409)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTHHHH--------HHHHHTCEEEEEE--CCGGGTSCC-CTTGGGGCCT-TEEEEEEES
T ss_pred HHHHHHHhCCCCCEEEEcCCCchhHHH--------HHHHcCCEEEEec--cCCCCCCcc-HHHHHHhhCc-CCeEEEECC
Confidence 999999999999999999987654321 2345566555444 442 23344 7888888865 788888877
Q ss_pred CCCC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCCcEEEECCCccC--ccccEEEEEEeCC
Q 016668 260 SAYP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 260 s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~gaDiv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
+++| ... ++++|.++|+++|++||+|++|.. +...+.....+ .+.|++++|+||++ +|.|.|+++++++
T Consensus 183 p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 261 (409)
T 2gb3_A 183 PCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSE-IVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNE 261 (409)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTT-CBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccc-cccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcH
Confidence 6654 333 589999999999999999999864 33333222212 25689999999998 5667899999883
Q ss_pred CCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 330 ~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+........ +++....+++..+|+
T Consensus 262 -----~l~~~l~~~~~~~~--~~~~~~~~a~~~~l~ 290 (409)
T 2gb3_A 262 -----ELISHAMKLAQGRL--APPLLEQIGSVGLLN 290 (409)
T ss_dssp -----HHHHHHHHHHHHSC--CCCHHHHHHHHHHHT
T ss_pred -----HHHHHHHHHHhccC--CCCHHHHHHHHHHHh
Confidence 46565554332222 344455555555663
No 92
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.79 E-value=1.5e-18 Score=186.62 Aligned_cols=213 Identities=14% Similarity=0.051 Sum_probs=146.9
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
+++.+++++|.+. .+.+++|+ .||.+++.++++|||+|++..+.|.+... .+...|..+..++...
T Consensus 210 ~ee~la~l~G~d~-----~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~--------~~~~~G~~~v~v~~~~ 276 (755)
T 2vyc_A 210 SEKYAARVFGADR-----SWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ--------GLMLTGAKPVYMVPSR 276 (755)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHHHHCCEEEEECCCB
T ss_pred HHHHHHHHhCCCc-----eEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHH--------HHHHcCCEEEEEeCCC
Confidence 5667899999975 35567775 69999999999999999999886544321 2345676555544322
Q ss_pred cCC--CCCC-----CHHHHHHHhhhc-CC--------cEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEeccccccccc
Q 016668 232 DES--TGLV-----DYDMLEKTAILF-RP--------KLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (385)
Q Consensus 232 ~~~--~~~i-----D~d~le~~i~~~-~p--------klIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~ 294 (385)
+.. .+.+ |+++|++.+++. ++ ++++++.++ +|...|+++|+++|+++|++|++|++|+.++.+
T Consensus 277 ~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~ 356 (755)
T 2vyc_A 277 NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARF 356 (755)
T ss_dssp CTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESSCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGG
T ss_pred CccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECCCCCceecCHHHHHHHHHHcCCEEEEECcCchhccc
Confidence 100 1235 999999998652 23 477766554 477889999999999999999999999766544
Q ss_pred cCcc--cCCCCC--CcE------EEECCCccCcccc-EEEEEEeCC--CCchhHHHHHHhhccCCCccCCChHHHHHHHH
Q 016668 295 ASVV--ADPFKY--CDV------VTTTTHKSLRGPR-GGMIFFKKD--PVLGVELESAINNAVFPGLQGGPHNHTIGGLA 361 (385)
Q Consensus 295 ~g~~--~~p~~g--aDi------v~~S~hK~l~Gpr-gG~I~~~~~--~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala 361 (385)
.+.. .+++.+ +|+ +++|+||+|+||+ ||+++++++ .+. ..+++........++|+...++++.
T Consensus 357 ~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~----~~~~~~~~~~~~s~sp~~~~iaal~ 432 (755)
T 2vyc_A 357 NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAIN----FSRFNQAYMMHATTSPLYAICASND 432 (755)
T ss_dssp CGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCC----HHHHHHHHHHTSCSSCCHHHHHHHH
T ss_pred CcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccC----HHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3321 233334 676 9999999999997 678888765 221 1223322222234679999999999
Q ss_pred HHHHHhhCchHHHHHHHHhcc
Q 016668 362 VCLKHAQSPEFKVYQNKSACK 382 (385)
Q Consensus 362 ~Al~e~~~~~~~~y~~~v~~~ 382 (385)
+|++.+..++..++.++++++
T Consensus 433 aA~~~l~~~gg~~~~~~~~~~ 453 (755)
T 2vyc_A 433 VAVSMMDGNSGLSLTQEVIDE 453 (755)
T ss_dssp HHHHHHSTHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHH
Confidence 999987765455666665543
No 93
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.79 E-value=1.1e-18 Score=168.66 Aligned_cols=241 Identities=10% Similarity=0.015 Sum_probs=157.8
Q ss_pred ccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 104 SLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 104 ~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
.+.+.++...+++.|++++...+.+... ++.. + +..+ .++.+.+++++++++|.+..+ ..+.+.||+.|+..
T Consensus 5 ~~~~~p~p~~~~~~v~~~~~~~~~~~~~-~~~~-~---~~~~-~~~~~~~~~~la~~~g~~~~~--~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 5 KIYFTPGPSELYPTVRQHMITALDEKIG-VISH-R---SKKF-EEVYKTASDNLKTLLELPSNY--EVLFLASATEIWER 76 (362)
T ss_dssp CEEECSSSCCCCTTHHHHHHHHHHTTTT-TSCT-T---SHHH-HHHHHHHHHHHHHHTTCCTTE--EEEEESCHHHHHHH
T ss_pred ceeccCCCcCCCHHHHHHHHHHhcCCcc-CcCC-C---CHHH-HHHHHHHHHHHHHHhCCCCCc--EEEEeCCchHHHHH
Confidence 3667788888999999888777654321 1111 1 2222 245555788999999986422 23455677889999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC-
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY- 262 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~- 262 (385)
++.++++| +.+++..+ |+++.+. ..+...|..+..++ .+ .++.+|+++++ ++ .++|+|+++.+++
T Consensus 77 ~~~~l~~~-~~i~~~~~----~~~~~~~---~~~~~~g~~~~~v~--~~-~~~~~d~~~l~--~~-~~~~~v~~~~~~np 142 (362)
T 3ffr_A 77 IIQNCVEK-KSFHCVNG----SFSKRFY---EFAGELGREAYKEE--AA-FGKGFYPADIT--VP-ADAEIICLTHNETS 142 (362)
T ss_dssp HHHHHCSS-EEEEEECS----HHHHHHH---HHHHHTTCEEEEEE--CC-TTCCCCGGGCC--CC-TTCCEEEEESEETT
T ss_pred HHHhccCC-cEEEEcCc----HHHHHHH---HHHHHhCCCeEEEe--cC-CCCCCCHHHHh--cc-CCccEEEEEcCCCC
Confidence 99999988 55554433 2222111 12334566555555 43 35689999998 43 4789998877654
Q ss_pred -CCCCCHHHHHHHHHHc-CcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHH
Q 016668 263 -PRDFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESA 339 (385)
Q Consensus 263 -~~~~dl~~I~~ia~~~-ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~ 339 (385)
|...|+++|.++|+++ |+++++|++|..|.. +.++..+|++++|+||+|.||.| |+++.++ ++.++
T Consensus 143 tG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~-----~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~------~~~~~ 211 (362)
T 3ffr_A 143 SGVSMPVEDINTFRDKNKDALIFVDAVSSLPYP-----KFDWTKIDSVFFSVQKCFGLPAGLGVWILND------RVIEK 211 (362)
T ss_dssp TTEECCHHHHTTSGGGSTTSEEEEECTTTTTSS-----CCCTTSCSEEEEETTSTTCCCSCCEEEEEEH------HHHHH
T ss_pred cceeCCHHHHHHHHHhCCCCEEEEecccccCCc-----ccChhHCcEEEEecccccCCCCceEEEEECH------HHHHH
Confidence 4678999999999999 999999999875532 22233489999999999986766 7877777 45554
Q ss_pred HhhccC--------------------CCccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 340 INNAVF--------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 340 i~~~~f--------------------p~~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
+..... ....++++...++++..+++.+...++.+..+
T Consensus 212 ~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 269 (362)
T 3ffr_A 212 SKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRK 269 (362)
T ss_dssp HHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHH
Confidence 433211 11145677777888888887554433333333
No 94
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.78 E-value=7.1e-18 Score=173.74 Aligned_cols=176 Identities=15% Similarity=0.102 Sum_probs=129.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--------------CCCEEeecCCCCCcccc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------------PHDRIMGLDLPHGGHLS 207 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--------------pGD~Vl~~~~~~ggh~s 207 (385)
..+...++|+.+.+|+++++|.+... ...+++++||.||..++.++.+ |+++|+++++.|.+..
T Consensus 129 ~~p~~~~le~~~~~~l~~~~g~~~~~-~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~- 206 (511)
T 3vp6_A 129 IAPVFVLMEQITLKKMREIVGWSSKD-GDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK- 206 (511)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCCSSS-CEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH-
T ss_pred cCchHHHHHHHHHHHHHHHhCCCCCC-CceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH-
Confidence 34667799999999999999998421 1246677889999988887754 6788998876543321
Q ss_pred CCccccccccccCcc---eEEEEeccccCCCCCCCHHHHHHHhhhcC-----CcEEEEcCCC--CCCCCCHHHHHHHHHH
Q 016668 208 HGFMTPKRRVSGTSI---YFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGASA--YPRDFDYPRMRQIADA 277 (385)
Q Consensus 208 ~~~~~~~~~~~~~g~---~~~~i~~~~~~~~~~iD~d~le~~i~~~~-----pklIi~~~s~--~~~~~dl~~I~~ia~~ 277 (385)
+.+...|. .+..++ ++ +++.+|+++|++.+++.+ |++|++..++ +|...|+++|+++|++
T Consensus 207 -------~~~~~~g~g~~~~~~v~--~d-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~ 276 (511)
T 3vp6_A 207 -------KAGAALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEK 276 (511)
T ss_dssp -------HHHHHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHH
T ss_pred -------HHHHHcCCCCCcEEEee--cC-CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHH
Confidence 23445555 455554 55 368999999999996532 7888776544 4677899999999999
Q ss_pred cCcEEEEeccccccccccCcccCCC---CCCcEEEECCCccCccccE-EEEEEeCC
Q 016668 278 VGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 278 ~ga~livD~ah~~Gli~~g~~~~p~---~gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
+|+++++|++|+.|......+...+ +++|++++++||+|.+|.+ |+++++++
T Consensus 277 ~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~ 332 (511)
T 3vp6_A 277 YNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 332 (511)
T ss_dssp HTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred cCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCH
Confidence 9999999999987765433222222 3679999999999988865 78888775
No 95
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.78 E-value=6.3e-18 Score=166.26 Aligned_cols=256 Identities=14% Similarity=0.072 Sum_probs=164.3
Q ss_pred hhcccCChHHHHHHHHHHHHh-----hhccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQ-----FKSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~-----~~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~ 153 (385)
.+++.+.++.+..+.+...+. +.-|+|-..++ .+++.|++++...+.. ..+|+.. .|.. ++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~---~g~~---~lr~~l 75 (396)
T 3jtx_A 4 TLLKQLKPYPFARLHEAMQGISAPEGMEAVPLHIGEPKHPTPKVITDALTASLHE--LEKYPLT---AGLP---ELRQAC 75 (396)
T ss_dssp HHHHHCCSCHHHHHHHHTTTCCCCTTCCCEECSCCSCCSCCCHHHHHHHHHTGGG--GGSCCCT---TCCH---HHHHHH
T ss_pred hhhccCCCChHHHHHHHHHhhhhccCCCeEEeCCcCCCCCCCHHHHHHHHHHhhh--ccCCCCC---CCcH---HHHHHH
Confidence 345566666665554433321 12355544333 3579999999877642 2245442 2333 677778
Q ss_pred HHHHHHHcCCC---CCCCcceeecCCcHHHHHHHHHHhccCC-----CEEeecCCCCCccccCCccccccccccCcceEE
Q 016668 154 QKRALAAFNLD---ENKWGVNVQPLSGSPANFEVYTAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (385)
Q Consensus 154 ~~~la~lfg~~---~~~~~~~V~~~sGs~A~~~a~~all~pG-----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (385)
++++.+.+|.+ .++. .+.+++|++|+..++.++++|| |+|++.+|.|.++.. .+...|..+.
T Consensus 76 a~~l~~~~g~~~~~~~~~--i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~--------~~~~~g~~~~ 145 (396)
T 3jtx_A 76 ANWLKRRYDGLTVDADNE--ILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEG--------ATLLGGGEIH 145 (396)
T ss_dssp HHHHHHHTTTCCCCTTTS--EEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHH--------HHHHTTCEEE
T ss_pred HHHHHHhcCCCCCCCCCe--EEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHH--------HHHHcCCEEE
Confidence 88899999964 3201 2444555679999999999997 799999887654321 2345676555
Q ss_pred EEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCccc-
Q 016668 226 SMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVA- 299 (385)
Q Consensus 226 ~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~- 299 (385)
.++ +++++..+|++++++.+++ ++|+|+++.++|| ...+ +++|.++|+++|+++|+|++|. ++...+..+
T Consensus 146 ~v~--~~~~g~~~d~~~l~~~~~~-~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~ 221 (396)
T 3jtx_A 146 FAN--CPAPSFNPDWRSISEEVWK-RTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYS-EIYFDGNKPL 221 (396)
T ss_dssp EEE--CCTTTCCCCGGGSCHHHHH-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTT-TCCSTTCCCC
T ss_pred Eee--cCCCCCccCHHHHHHhhcc-CcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCc
Confidence 555 4544557899999998876 7899988777765 4555 5559999999999999999984 444443111
Q ss_pred CCC---------CCCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 300 DPF---------KYCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 300 ~p~---------~gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
..+ .+.++++.|+||++ +|.|.|++++++ ++.+.+....... ..+++....++...+++
T Consensus 222 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~a~~~~l~ 291 (396)
T 3jtx_A 222 GCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDA------ELLKNFLLYRTYH-GSAMSIPVQRASIAAWD 291 (396)
T ss_dssp CHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECH------HHHHHHHHHHHHH-TCCCCHHHHHHHHHHHH
T ss_pred hHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCH------HHHHHHHHHHhhc-ccCCCHHHHHHHHHHhC
Confidence 111 24568899999974 678889998876 5666665432211 22445555555565664
No 96
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.78 E-value=2.9e-18 Score=168.55 Aligned_cols=190 Identities=15% Similarity=0.129 Sum_probs=140.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-ccCC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-LKPH 192 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l~pG 192 (385)
.++.+++++...+.+.. + . ..+...+++ +.+++++|.+. .+.+.||+.|+..++.++ ++||
T Consensus 18 ~~~~~~~a~~~~~~~~~---~-----~-~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~al~~~~~~~~~~~g 79 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSGW---I-----T-TGPKNQELE----AAFCRLTGNQY-----AVAVSSATAGMHIALMALGIGEG 79 (393)
T ss_dssp CCHHHHHHHHHHHHHTC---C-----S-SSHHHHHHH----HHHHHHHCCSE-----EEEESCHHHHHHHHHHHTTCCTT
T ss_pred CCHHHHHHHHHHHhcCC---c-----C-CChHHHHHH----HHHHHHhCCCc-----EEEecChHHHHHHHHHHcCCCCC
Confidence 56888899887775431 1 1 123333444 56888999864 366788899999999999 9999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHH
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMR 272 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~ 272 (385)
|+|++.++.|.++.. .+...|..+.. ++++++++.+|++++++.+++ ++|+|++.+ .+|...|+++|.
T Consensus 80 d~Vl~~~~~~~~~~~--------~~~~~g~~~~~--v~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~-~~G~~~~~~~i~ 147 (393)
T 1mdo_A 80 DEVITPSMTWVSTLN--------MIVLLGANPVM--VDVDRDTLMVTPEHIEAAITP-QTKAIIPVH-YAGAPADLDAIY 147 (393)
T ss_dssp CEEEEESSSCHHHHH--------HHHHTTCEEEE--ECBCTTTCCBCHHHHHHHCCT-TEEEECCBC-GGGCCCCHHHHH
T ss_pred CEEEeCCCccHhHHH--------HHHHCCCEEEE--EeccCCcCCCCHHHHHHhcCC-CceEEEEeC-CCCCcCCHHHHH
Confidence 999999987655421 33456765444 446655578999999999865 788888764 366778999999
Q ss_pred HHHHHcCcEEEEeccccccccccCcccCCCCC-CcEEEECCC--ccCccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 273 QIADAVGALLMMDMAHISGLVAASVVADPFKY-CDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 273 ~ia~~~ga~livD~ah~~Gli~~g~~~~p~~g-aDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
++|+++|+++++|++|+.|....+. ++ + .|++++|+| |+++|+++|+++++++ ++.+++..
T Consensus 148 ~l~~~~~~~li~D~a~~~g~~~~~~---~~-~~~d~~~~S~~k~K~l~~~~~g~~~~~~~-----~~~~~l~~ 211 (393)
T 1mdo_A 148 ALGERYGIPVIEDAAHATGTSYKGR---HI-GARGTAIFSFHAIKNITCAEGGIVVTDNP-----QFADKLRS 211 (393)
T ss_dssp HHHHHHTCCBCEECTTCTTCEETTE---ET-TSSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHHH
T ss_pred HHHHHcCCeEEEECccccCCeECCe---ec-CCCCeEEEeCCCCCccccccceEEEeCCH-----HHHHHHHH
Confidence 9999999999999999877654332 11 3 799999999 9998889999999743 56665543
No 97
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.78 E-value=3.6e-18 Score=170.10 Aligned_cols=200 Identities=17% Similarity=0.110 Sum_probs=141.3
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-c
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI-L 189 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al-l 189 (385)
...+++.+++++...+.+.....|+. ..|.. ++.+.+++++++++|++. .+.+++|++|+..++.++ +
T Consensus 11 ~~~~~~~~~~a~~~~~~~~~~~~~~~---~~g~~---~l~~~l~~~la~~~g~~~-----~i~~~~gt~al~~~~~~~~~ 79 (418)
T 2c81_A 11 WPQHSDRTRRKIEEVFQSNRWAISGY---WTGEE---SMERKFAKAFADFNGVPY-----CVPTTSGSTALMLALEALGI 79 (418)
T ss_dssp SSCCCHHHHHHHHHHHHHTCCSTTSB---CCSSC---CHHHHHHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHhcCCccccCc---ccCCH---HHHHHHHHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHcCC
Confidence 34558999999988776431111321 22332 233345567899999874 477889999999999999 9
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHH
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYP 269 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~ 269 (385)
+|||+|+++++.|.++.. .+...|..+. .++++++++.+|++++++.+++ ++++|++++ .+|...|++
T Consensus 80 ~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~--~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~G~~~~~~ 147 (418)
T 2c81_A 80 GEGDEVIVPSLTWIATAT--------AVLNVNALPV--FVDVEADTYCIDPQLIKSAITD-KTKAIIPVH-LFGSMANMD 147 (418)
T ss_dssp CTTCEEEEESSSCTHHHH--------HHHHTTCEEE--EECBCTTTCSBCHHHHGGGCCT-TEEEECCBC-CTTCCCCHH
T ss_pred CCcCEEEECCCccHhHHH--------HHHHcCCEEE--EEecCCCCCCcCHHHHHHhhCC-CCeEEEEeC-CcCCcccHH
Confidence 999999999987655421 3345676544 4446554678999999999865 688888764 367778999
Q ss_pred HHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECC--CccCccccEEEEEEeCCCCchhHHHHHHh
Q 016668 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT--HKSLRGPRGGMIFFKKDPVLGVELESAIN 341 (385)
Q Consensus 270 ~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~--hK~l~GprgG~I~~~~~~~~~~~~~~~i~ 341 (385)
+|.++|+++|++|++|++|+.|....+. ++. ..|+++.|+ ||++.+++||+++++++ ++.+++.
T Consensus 148 ~i~~~~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~-----~l~~~~~ 214 (418)
T 2c81_A 148 EINEIAQEHNLFVIEDCAQSHGSVWNNQ---RAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNP-----RLFELIQ 214 (418)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCSSSCEEEEESCH-----HHHHHHH
T ss_pred HHHHHHHHCCCEEEEECcccccCccCCE---ecccccceEEEeccCCcccCCCCeEEEEECCH-----HHHHHHH
Confidence 9999999999999999999776433221 122 236666666 99986558899998653 5655554
No 98
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.78 E-value=4.5e-18 Score=170.97 Aligned_cols=168 Identities=14% Similarity=0.056 Sum_probs=126.0
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|...|+ +++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++.....
T Consensus 73 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~--- 138 (415)
T 2fq6_A 73 ELFYGRR--GTLTHFSLQQ----AMCELEGGAG-----CVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFC--- 138 (415)
T ss_dssp SCCCTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHH---
T ss_pred CccccCC--CCchHHHHHH----HHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHH---
Confidence 4555444 6676666665 6888999864 466789999999999999999999999998876643210
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHH--cCcEEEEeccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADA--VGALLMMDMAH 288 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~--~ga~livD~ah 288 (385)
...+...|..+..++ . .|++++++.+++ ++|+|++..++|| ...|+++|+++|++ +|+++++|++|
T Consensus 139 -~~~l~~~G~~v~~v~--~------~d~~~le~ai~~-~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~ 208 (415)
T 2fq6_A 139 -SKILSKLGVTTSWFD--P------LIGADIVKHLQP-NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTW 208 (415)
T ss_dssp -HHTGGGGTCEEEEEC--T------TCGGGGGGGCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTT
T ss_pred -HHHHHHcCcEEEEEC--C------CCHHHHHHhhcc-CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCC
Confidence 011234465444332 2 278999998865 6899998877765 67899999999999 99999999999
Q ss_pred cccccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCC
Q 016668 289 ISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKD 329 (385)
Q Consensus 289 ~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~ 329 (385)
+.+.. ..|++ ++|++++|+||++.|+. +|+++++++
T Consensus 209 a~~~~-----~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~ 248 (415)
T 2fq6_A 209 AAGVL-----FKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR 248 (415)
T ss_dssp TTTTS-----SCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT
T ss_pred ccccc-----CCccccCCeEEEEeCccccCCCCCceEEEEEeCHH
Confidence 76532 23455 89999999999997654 799998874
No 99
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.78 E-value=2.4e-18 Score=170.01 Aligned_cols=212 Identities=20% Similarity=0.160 Sum_probs=146.4
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all 189 (385)
+...+++.|++++. .+ .+ + ..+++..++.++++||++..+ ..+.+.+|++|+..++.++
T Consensus 38 ~~~~~~~~v~~a~~-----~~----------~~-~--~~~~~~~~~~~a~~~g~~~~~--~~~~~~ggt~a~~~~~~~~- 96 (374)
T 2aeu_A 38 GGFLIDEKDKALLN-----TY----------IG-S--SYFAEKVNEYGLKHLGGDEND--KCVGFNRTSSAILATILAL- 96 (374)
T ss_dssp CCCCCCHHHHHHHT-----ST----------TH-H--HHHHHHHHHHHHHHHTCCTTE--EEEEESSHHHHHHHHHHHH-
T ss_pred CCCCCCHHHHHHHH-----Hh----------cC-c--hHHHHHHHHHHHHHhCCCCcc--eEEEEcChHHHHHHHHHhC-
Confidence 46678999999985 11 11 1 244555667778999984211 1466788889999999987
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcE-EEEcCCCCCC---C
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL-IIAGASAYPR---D 265 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pkl-Ii~~~s~~~~---~ 265 (385)
|||+|++.++.|++|.+.. ..+...|..+ +.+ .|++++++. + .++|+ |+++.+++|. .
T Consensus 97 -~gd~Vl~~~~~y~~~~~~~-----~~~~~~g~~~--~~v--------~d~~~l~~~-~-~~~~~~v~~~~p~nptG~~~ 158 (374)
T 2aeu_A 97 -KPKKVIHYLPELPGHPSIE-----RSCKIVNAKY--FES--------DKVGEILNK-I-DKDTLVIITGSTMDLKVIEL 158 (374)
T ss_dssp -CCSEEEEECSSSSCCTHHH-----HHHHHTTCEE--EEE--------SCHHHHHTT-C-CTTEEEEEECBCTTSCBCCH
T ss_pred -CCCEEEEecCCCCccHHHH-----HHHHHcCcEE--EEe--------CCHHHHHhc-C-CCccEEEEEccCCCCCCCCc
Confidence 9999999999877664310 1233456543 332 388999887 4 47899 8888777763 5
Q ss_pred CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHhhcc
Q 016668 266 FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAINNAV 344 (385)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~~~~ 344 (385)
.++++|.++|+++|+++++|++|..+.......++++. +.|++++|+||+++||++|++++++ ++.+++....
T Consensus 159 ~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~------~~~~~l~~~~ 232 (374)
T 2aeu_A 159 ENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKK------ELVDKIYIEG 232 (374)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEH------HHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECH------HHHHHHHHhh
Confidence 68999999999999999999998655310110111333 6799999999999999999999987 5777665533
Q ss_pred CCCccCCChHHHHHHHHHHHHHh
Q 016668 345 FPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 345 fp~~qg~p~~~~iaala~Al~e~ 367 (385)
... .++++....++...+++..
T Consensus 233 ~~~-~~~~~~~~~~a~~~al~~~ 254 (374)
T 2aeu_A 233 TKF-GLEAQPPLLAGIYRALKNF 254 (374)
T ss_dssp HTT-TCBCCHHHHHHHHHHHHHC
T ss_pred ccc-cCCCCHHHHHHHHHHHHHH
Confidence 221 1235555666666677654
No 100
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.78 E-value=1.8e-18 Score=170.62 Aligned_cols=212 Identities=13% Similarity=0.142 Sum_probs=141.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+.++. ++.+.+++++++++|++. ..+++.|||.|+.+++. +++|||+|+++++.| .++.+. ..+...|
T Consensus 30 ~~~~~-~~~~~~~~~l~~~~~~~~----~v~~~~sgt~a~~~~~~-~~~~gd~vi~~~~~~---~~~~~~---~~~~~~g 97 (379)
T 3ke3_A 30 SKAFQ-EVMNDLLSNLKTVYNAEA----AVIIPGSGTYGMEAVAR-QLTIDEDCLIIRNGW---FSYRWT---QILEKGK 97 (379)
T ss_dssp SHHHH-HHHHHHHHHHHHHHTCSE----EEEEESCHHHHHHHHHH-HHCTTCEEEEEECSH---HHHHHH---HHHHHHC
T ss_pred CHHHH-HHHHHHHHHHHHHhCCCC----EEEEcCChhHHHHHHHH-hCCCCCeEEEEeCCc---hhHHHH---HHHHHhC
Confidence 44544 455557889999999983 34556788999998774 568999999987643 222110 1122233
Q ss_pred c--eEEEEeccccC-----CC-CCCCHHHHHHHhhhcCCcEEEEcCC--CCCCCCC---HHHHHHHHHHcCcEEEEeccc
Q 016668 222 I--YFESMPYRLDE-----ST-GLVDYDMLEKTAILFRPKLIIAGAS--AYPRDFD---YPRMRQIADAVGALLMMDMAH 288 (385)
Q Consensus 222 ~--~~~~i~~~~~~-----~~-~~iD~d~le~~i~~~~pklIi~~~s--~~~~~~d---l~~I~~ia~~~ga~livD~ah 288 (385)
. .+..++.+.+. .. +.+|++++++.++..++++|++... .++...| +++|+++|+++|+++++|++|
T Consensus 98 ~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~ 177 (379)
T 3ke3_A 98 FAKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIA 177 (379)
T ss_dssp CSSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEecc
Confidence 2 33444432100 01 2689999999996557898877543 3466778 999999999999999999998
Q ss_pred cccccccCcccCCCC--CCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhhcc---C---------------CC
Q 016668 289 ISGLVAASVVADPFK--YCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAV---F---------------PG 347 (385)
Q Consensus 289 ~~Gli~~g~~~~p~~--gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~~~---f---------------p~ 347 (385)
+ |. .+..++ ++|++++|+||+|.||.| |++++++ ++.+++.... + .+
T Consensus 178 ~-g~-----~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g 245 (379)
T 3ke3_A 178 S-GC-----VWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSA------AAIKKVESTESNCFSLDLKQWLTIMRAYENG 245 (379)
T ss_dssp C-TT-----CCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECH------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTT
T ss_pred c-CC-----ccccccccCCCEEEecchhhcCCCCceEEEEECH------HHHHhhhcCCCCceeecHHHHHHHHHhhhcc
Confidence 6 52 122222 789999999999988875 8888877 4555554211 0 01
Q ss_pred ---ccCCChHHHHHHHHHHHHHhhCchHHHHHH
Q 016668 348 ---LQGGPHNHTIGGLAVCLKHAQSPEFKVYQN 377 (385)
Q Consensus 348 ---~qg~p~~~~iaala~Al~e~~~~~~~~y~~ 377 (385)
..++++...++|+..|++.+...++.+..+
T Consensus 246 ~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~ 278 (379)
T 3ke3_A 246 GHAYHATMPTDSLRQFRDAILEAKEIGFDILRD 278 (379)
T ss_dssp SCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHH
Confidence 124788899999999998776554444333
No 101
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.78 E-value=3.8e-18 Score=170.42 Aligned_cols=195 Identities=17% Similarity=0.208 Sum_probs=139.3
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL 189 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all 189 (385)
++-.+++.+.+++...+... .|+. ..+...+++ +.+++++|.+. .+++.+|++|+..++.++.
T Consensus 26 p~~~~p~~~~~a~~~~~~~~---~y~~-----~~~~~~~l~----~~la~~~~~~~-----v~~~~ggt~al~~~l~~l~ 88 (424)
T 2po3_A 26 PNRIDRARLYERLDRALDSQ---WLSN-----GGPLVREFE----ERVAGLAGVRH-----AVATCNATAGLQLLAHAAG 88 (424)
T ss_dssp CCCCCHHHHHHHHHHHHHHT---CCSS-----SCHHHHHHH----HHHHHHHTSSE-----EEEESCHHHHHHHHHHHHT
T ss_pred CCCCChHHHHHHHHHHHhcC---Cccc-----CCHHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHcC
Confidence 33344678888887766431 1221 023344554 46788888853 3667778889999999885
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHH
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYP 269 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~ 269 (385)
+||+|+++++.|.++.. .+...|..+. .++++++++.+|+++|++.+++ ++++|++.. .++...+++
T Consensus 89 -~gd~Vlv~~~~~~~~~~--------~~~~~G~~~~--~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~tG~~~~l~ 155 (424)
T 2po3_A 89 -LTGEVIMPSMTFAATPH--------ALRWIGLTPV--FADIDPDTGNLDPDQVAAAVTP-RTSAVVGVH-LWGRPCAAD 155 (424)
T ss_dssp -CCSEEEEESSSCTHHHH--------HHHHTTCEEE--EECBCTTTSSBCHHHHGGGCCT-TEEEEEEEC-GGGCCCCHH
T ss_pred -CCCEEEECCCccHHHHH--------HHHHcCCEEE--EEecCCCcCCcCHHHHHHhhCc-CCcEEEEEC-CCCCcCCHH
Confidence 89999999987655421 3345676544 4446655678999999998865 688888754 356778999
Q ss_pred HHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCC--ccCccccEEEEEEeCCCCchhHHHHHHhh
Q 016668 270 RMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 270 ~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~h--K~l~GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+|.++|+++|++||+|++|..|+...+. ++. ..|++++|+| |+|+|+++|+++++++ ++.+++..
T Consensus 156 ~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~-----~l~~~l~~ 223 (424)
T 2po3_A 156 QLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLGDAEVFSFHATKAVNAFEGGAVVTDDA-----DLAARIRA 223 (424)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCCSSCEEEEESCH-----HHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECccccCCeECCe---ecccccCEEEEeCCCCCCccCCCCeEEEeCCH-----HHHHHHHH
Confidence 9999999999999999999877765432 232 4689999988 8898899999999843 56666654
No 102
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.78 E-value=1e-17 Score=163.57 Aligned_cols=248 Identities=15% Similarity=0.032 Sum_probs=157.4
Q ss_pred CChHHHHHHHHHHHHhh-h--ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHH
Q 016668 86 ADPEVCEIITKEKERQF-K--SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAA 160 (385)
Q Consensus 86 ~dp~~~~~i~~e~~~~~-~--~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~l 160 (385)
++|+.+..+.+...+.. + -++|-..++ .+++.|.+++...+.. ..+|+. ..|.+ ++++..++++.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~---~~g~~---~lr~~la~~l~~~ 75 (376)
T 3ezs_A 4 FEPYPFERLRALLKEITPKKRGLDLGIGEPQFETPKFIQDALKNHTHS--LNIYPK---SAFEE---SLRAAQRGFFKRR 75 (376)
T ss_dssp CCCCHHHHHHHHHTTCCCSSCCCBCSSCCCCSCCCHHHHHHHHTTGGG--GGSCCC---TTCCH---HHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHhhhccCCEEEeCCCCCCCCCCHHHHHHHHHhhhh--cCCCCC---CCCCH---HHHHHHHHHHHHH
Confidence 34555554444333222 2 244443433 3579999999876622 223443 12333 6777788888888
Q ss_pred cCC--CCCCCcceeecCCcHHHHHHHHHHhccC--CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC
Q 016668 161 FNL--DENKWGVNVQPLSGSPANFEVYTAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG 236 (385)
Q Consensus 161 fg~--~~~~~~~~V~~~sGs~A~~~a~~all~p--GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~ 236 (385)
+|+ +.+ ..+.+++|++|+..++.++++| ||+|++.+|.|.++.. .+...|..+..++ +++++
T Consensus 76 ~g~~~~~~---~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~~~~- 141 (376)
T 3ezs_A 76 FKIELKEN---ELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEG--------AAKFIKAKSLLMP--LTKEN- 141 (376)
T ss_dssp HSCCCCGG---GEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGGG-
T ss_pred hCCCCCHH---HEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHH--------HHHHcCCEEEEcc--cCCCC-
Confidence 898 432 2355566778999999999999 9999999887654321 2345666555554 44322
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---------
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF--------- 302 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~--------- 302 (385)
.+++ ++++.+.. ++++|++..++|| ...+ +++|+++|+++|++||+|++|. ++...+.....+
T Consensus 142 ~~~~-~l~~~~~~-~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~ 218 (376)
T 3ezs_A 142 DFTP-SLNEKELQ-EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYS-EIYENTPPPSLLEACMLAGNE 218 (376)
T ss_dssp TSCC-CCCHHHHH-HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBSSSCCCCHHHHHHHTTCT
T ss_pred Ccch-hHHhhhcc-CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccch-hhccCCCCCCHHHcccccccc
Confidence 2343 56666654 6899988777765 4445 6778888999999999999985 444433222111
Q ss_pred C-CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 303 K-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 303 ~-gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
. +.++++.|+||++ +|.|.|++++++ ++.+.+........ .+++....++...+++
T Consensus 219 ~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~ 277 (376)
T 3ezs_A 219 AFKNVLVIHSLSKRSSAPGLRSGFIAGDS------RLLEKYKAFRAYLG-YTSANAIQKASEAAWL 277 (376)
T ss_dssp TCTTEEEEEESTTTTTCGGGCCEEEEECH------HHHHHHHHHHTTTC-CCCCHHHHHHHHHHHH
T ss_pred ccCcEEEEecchhccCCccceeEEEeeCH------HHHHHHHHHHhhhc-CCCChHHHHHHHHHHh
Confidence 2 4568899999998 577889999876 67777765433222 2345555556566665
No 103
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.77 E-value=2.5e-18 Score=167.86 Aligned_cols=197 Identities=13% Similarity=0.082 Sum_probs=140.3
Q ss_pred ccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHH
Q 016668 106 ELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVY 185 (385)
Q Consensus 106 ~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~ 185 (385)
++-.+.+...+ +++++...+.... |+ ..+...+++ +.+++++|.+. .+.+.||+.|+..++
T Consensus 10 ~l~~~~~~~~~-~~~~~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~~~ 70 (374)
T 3uwc_A 10 YLERQFADIEP-YLNDLREFIKTAD--------FT-LGAELEKFE----KRFAALHNAPH-----AIGVGTGTDALAMSF 70 (374)
T ss_dssp CHHHHTSSCHH-HHHHHHHHHHHTC--------CS-SCHHHHHHH----HHHHHHTTCSE-----EEEESCHHHHHHHHH
T ss_pred ccccCCCCchH-HHHHHHHHHHcCC--------cc-cChhHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHH
Confidence 33344455555 8888876664321 11 233334444 56889999874 467889999999999
Q ss_pred HHh-ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCC
Q 016668 186 TAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPR 264 (385)
Q Consensus 186 ~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~ 264 (385)
.++ ++|||+|++.++.|.++.. .+...|..+..++ ++ +++.+|++++++.+++ ++++|+... .+|.
T Consensus 71 ~~~~~~~gd~v~~~~~~~~~~~~--------~~~~~g~~~~~~~--~~-~~~~~d~~~l~~~~~~-~~~~v~~~n-~~G~ 137 (374)
T 3uwc_A 71 KMLNIGAGDEVITCANTFIASVG--------AIVQAGATPVLVD--SE-NGYVIDPEKIEAAITD-KTKAIMPVH-YTGN 137 (374)
T ss_dssp HHTTCCTTCEEEEESSSCHHHHH--------HHHHTTCEEEEEC--BC-TTSSBCGGGTGGGCCT-TEEEECCBC-GGGC
T ss_pred HHcCCCCCCEEEECCCccHHHHH--------HHHHcCCEEEEEe--cC-CCCCcCHHHHHHhCCC-CceEEEEeC-CcCC
Confidence 999 9999999999987655421 3445676554444 55 4678999999998865 678887332 2567
Q ss_pred CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCC--ccCcc-ccEEEEEEeCCCCchhHHHHHH
Q 016668 265 DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRG-PRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 265 ~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~h--K~l~G-prgG~I~~~~~~~~~~~~~~~i 340 (385)
..|+++|.++|+++|+++++|++|+.|....+. +.. .+|++++|+| |+|.+ +.||+++++++ ++.+++
T Consensus 138 ~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~-----~~~~~~ 209 (374)
T 3uwc_A 138 IADMPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSWGQFACFSLHPLKNLNVWSDAGVIITHSD-----EYAEKL 209 (374)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECSSSSSSCCSSCCEEEEESCH-----HHHHHH
T ss_pred cCCHHHHHHHHHHcCCEEEEeCCCccCceeCCe---eccccccEEEEeCCCCCcCCccceeEEEEeCCH-----HHHHHH
Confidence 789999999999999999999999876543321 222 4699999988 99977 56899988875 566655
Q ss_pred hh
Q 016668 341 NN 342 (385)
Q Consensus 341 ~~ 342 (385)
..
T Consensus 210 ~~ 211 (374)
T 3uwc_A 210 RL 211 (374)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 104
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.77 E-value=5.6e-18 Score=169.11 Aligned_cols=170 Identities=21% Similarity=0.199 Sum_probs=126.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
|++..+++++ ++++++|.+. .+.+++|++|+..++.++++|||+|+++++.|+++..... ..+...|
T Consensus 60 ~~~~~~~l~~----~ia~~~g~~~-----~i~~~~g~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~----~~~~~~g 126 (404)
T 1e5e_A 60 GNPTVSNLEG----KIAFLEKTEA-----CVATSSGMGAIAATVLTILKAGDHLISDECLYGCTHALFE----HALTKFG 126 (404)
T ss_dssp CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHH----THHHHTT
T ss_pred cChHHHHHHH----HHHHHhCCCc-----EEEeCChHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHH----HHHHHcC
Confidence 6665555554 6788889863 4678899999999999999999999999988765432000 0134556
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHH-cCcEEEEeccccccccccCcc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADA-VGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~-~ga~livD~ah~~Gli~~g~~ 298 (385)
..+..++ .+ |++++++.+++ ++|+|+++.++|| ...|+++|.++|++ +|+++++|++|..+..
T Consensus 127 ~~~~~v~--~~------d~~~l~~~i~~-~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~----- 192 (404)
T 1e5e_A 127 IQVDFIN--TA------IPGEVKKHMKP-NTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMI----- 192 (404)
T ss_dssp CEEEEEC--TT------STTHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTT-----
T ss_pred CEEEEEC--CC------CHHHHHHhcCC-CCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhh-----
Confidence 6544433 32 78899998865 7899999877765 67899999999999 9999999999965432
Q ss_pred cCCCC-CCcEEEECCCccCccc--c-EEEEEEeCCCCchhHHHH-HHhhcc
Q 016668 299 ADPFK-YCDVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELES-AINNAV 344 (385)
Q Consensus 299 ~~p~~-gaDiv~~S~hK~l~Gp--r-gG~I~~~~~~~~~~~~~~-~i~~~~ 344 (385)
..|++ ++|+++.|+||+|.|| | +|++++++ ++.+ ++....
T Consensus 193 ~~~~~~~~di~~~S~sK~~~~~g~ri~G~~~~~~------~~~~~~l~~~~ 237 (404)
T 1e5e_A 193 TNPVDFGVDVVVHSATKYINGHTDVVAGLICGKA------DLLQQIRMVGI 237 (404)
T ss_dssp CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECH------HHHHHHHHTCC
T ss_pred CCccccCCEEEEEcCccccCCCCCCeEEEEEECH------HHHHHHHHHHH
Confidence 13444 7899999999998665 5 49999987 4555 676543
No 105
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.77 E-value=1.2e-17 Score=163.05 Aligned_cols=232 Identities=13% Similarity=0.058 Sum_probs=153.8
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
-+++...++ .+++.|++++...+.+. ..+|+. . |. ++++..++++.+.+|.+.. ....+.+++|++|+
T Consensus 25 ~idl~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~-~---~~----~lr~~la~~~~~~~~~~~~-~~~i~~t~g~~~a~ 94 (377)
T 3fdb_A 25 VLPLWVAESDFSTCPAVLQAITDAVQRE-AFGYQP-D---GS----LLSQATAEFYADRYGYQAR-PEWIFPIPDVVRGL 94 (377)
T ss_dssp SEECCSSCCCSCCCHHHHHHHHHHHHTT-CCSSCC-S---SC----CHHHHHHHHHHHHHCCCCC-GGGEEEESCHHHHH
T ss_pred eeeecccCCCCCCCHHHHHHHHHHHHcC-CCCCCC-C---CH----HHHHHHHHHHHHHhCCCCC-HHHEEEeCChHHHH
Confidence 355554444 35899999998877642 234543 1 22 5676677777777775421 11234455667799
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
..++.++++|||+|++.++.|.++.. .+...|..+..++ ++++ +|++++++.+++ ++++|++..++
T Consensus 95 ~~~~~~~~~~gd~vl~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~~---~d~~~l~~~l~~-~~~~v~i~~p~ 160 (377)
T 3fdb_A 95 YIAIDHFTPAQSKVIVPTPAYPPFFH--------LLSATQREGIFID--ATGG---INLHDVEKGFQA-GARSILLCNPY 160 (377)
T ss_dssp HHHHHHHSCTTCCEEEEESCCTHHHH--------HHHHHTCCEEEEE--CTTS---CCHHHHHHHHHT-TCCEEEEESSB
T ss_pred HHHHHHhcCCCCEEEEcCCCcHhHHH--------HHHHcCCEEEEcc--CCCC---CCHHHHHHHhcc-CCCEEEEeCCC
Confidence 99999999999999999887655421 2345566555444 5432 999999999976 68888887777
Q ss_pred CC--CCC---CHHHHHHHHHHcCcEEEEeccccccccccC-cccCCCC-----CCcEEEECCCccC--ccccEEEEEEeC
Q 016668 262 YP--RDF---DYPRMRQIADAVGALLMMDMAHISGLVAAS-VVADPFK-----YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 262 ~~--~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g-~~~~p~~-----gaDiv~~S~hK~l--~GprgG~I~~~~ 328 (385)
+| ... ++++|+++|+++|+++|+|++|. ++...+ ..+.++. +.++++.|+||++ +|.+.|+++..+
T Consensus 161 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 239 (377)
T 3fdb_A 161 NPLGMVFAPEWLNELCDLAHRYDARVLVDEIHA-PLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN 239 (377)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-hhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC
Confidence 65 344 47788888999999999999985 444444 2222232 2237899999998 667889877754
Q ss_pred CCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+ ++.+.+..... ....+++....++...++++
T Consensus 240 ~-----~~~~~~~~~~~-~~~~~~~~~~~~a~~~~l~~ 271 (377)
T 3fdb_A 240 P-----SDAEHWQQLSP-VIKDGASTLGLIAAEAAYRY 271 (377)
T ss_dssp H-----HHHHHHHHSCH-HHHCCCCHHHHHHHHHHHHH
T ss_pred H-----HHHHHHHHHHH-hhcCCCCHHHHHHHHHHHhc
Confidence 3 67777765322 22234566666666666664
No 106
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.77 E-value=4.8e-17 Score=159.16 Aligned_cols=231 Identities=15% Similarity=0.130 Sum_probs=155.7
Q ss_pred cccccCCCC--CcHHHHHHHhhHhhcc--CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HH
Q 016668 105 LELIASENF--TSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SP 179 (385)
Q Consensus 105 l~Liasen~--~s~~V~~al~s~l~~~--y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~ 179 (385)
++|...++. +++.+.+++...+.+. ...+|+.. .+ .++++...+++.+.+|...+ . .+|.+++| ++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~---~~----~~l~~~la~~l~~~~g~~~~-~-~~v~~~~G~~~ 103 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELNRYPER---DA----VELRDELAAYITKQTGVAVT-R-DNLWAANGSNE 103 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTTSCCCT---TC----HHHHHHHHHHHHHHHCCCCC-G-GGEEEESHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccccCCCc---cH----HHHHHHHHHhhhhcccCCCC-h-HhEEECCChHH
Confidence 666655543 5789999988776542 11234321 12 36777777777777765421 1 14555565 56
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
|+..++.++++|||+|++.++.|.++.. .+...|..+..++ .+ +++.+|++++++.+++.++|+|++..
T Consensus 104 al~~~~~~l~~~gd~Vl~~~~~y~~~~~--------~~~~~g~~~~~v~--~~-~~~~~d~~~l~~~i~~~~~~~v~~~~ 172 (369)
T 3cq5_A 104 ILQQLLQAFGGPGRTALGFQPSYSMHPI--------LAKGTHTEFIAVS--RG-ADFRIDMDVALEEIRAKQPDIVFVTT 172 (369)
T ss_dssp HHHHHHHHHCSTTCEEEEEESSCTHHHH--------HHHHTTCEEEEEE--CC-TTSSCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHhcCCCCEEEEcCCChHHHHH--------HHHHcCCEEEEec--CC-cCCCCCHHHHHHHhhccCCCEEEEeC
Confidence 8889999999999999999987755421 2345666555444 44 34579999999998654789998877
Q ss_pred CCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--C-CcEEEECCCccC--ccccEEEEEEeCCCCc
Q 016668 260 SAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--Y-CDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 260 s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--g-aDiv~~S~hK~l--~GprgG~I~~~~~~~~ 332 (385)
+++| ...|.+++.++|+.+++++++|++|..+. ........++ + .+++++|+||++ +|.|.|++++++
T Consensus 173 ~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~---- 247 (369)
T 3cq5_A 173 PNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFS-PSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP---- 247 (369)
T ss_dssp SCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGC-CSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT----
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhc-CCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH----
Confidence 6654 67899999999999999999999986432 2111111112 3 458899999998 567889999987
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+.....+. +++....++...+++
T Consensus 248 --~~~~~l~~~~~~~---~~~~~~~~a~~~~l~ 275 (369)
T 3cq5_A 248 --AFIDAVMLVRLPY---HLSALSQAAAIVALR 275 (369)
T ss_dssp --HHHHHHHTTSCTT---CSCHHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCC---CCCHHHHHHHHHHhc
Confidence 6777776554332 355555555555665
No 107
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.77 E-value=3.3e-18 Score=166.66 Aligned_cols=193 Identities=13% Similarity=0.097 Sum_probs=133.4
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al- 188 (385)
+...+++.|++++...+.+.+ .++ + +...+ +++.+++++|.+. .+.+.||+.|+..++.++
T Consensus 7 ~~~~~~~~v~~a~~~~~~~~~--~~~------~-~~~~~----l~~~la~~~~~~~-----v~~~~ggt~al~~~~~~~~ 68 (375)
T 2fnu_A 7 SEPCLDKEDKKAVLEVLNSKQ--LTQ------G-KRSLL----FEEALCEFLGVKH-----ALVFNSATSALLTLYRNFS 68 (375)
T ss_dssp CCCCCCHHHHHHHHHHHTSSC--CSS------S-HHHHH----HHHHHHHHHTCSE-----EEEESCHHHHHHHHHHHSS
T ss_pred CCCCCCHHHHHHHHHHHHcCc--ccC------C-hHHHH----HHHHHHHHhCCCe-----EEEeCCHHHHHHHHHHHhc
Confidence 456789999999998875422 122 2 22333 4557889999873 366778889999999999
Q ss_pred --ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCC
Q 016668 189 --LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDF 266 (385)
Q Consensus 189 --l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~ 266 (385)
++|||+|+++++.|.++.. .+...|..+ +.++++++ +.+|++++++.+++ ++++|++..+ +|...
T Consensus 69 ~~~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~--~~~~~~~~-~~~d~~~l~~~i~~-~~~~v~~~~~-tG~~~ 135 (375)
T 2fnu_A 69 EFSADRNEIITTPISFVATAN--------MLLESGYTP--VFAGIKND-GNIDELALEKLINE-RTKAIVSVDY-AGKSV 135 (375)
T ss_dssp CCCTTSCEEEECSSSCTHHHH--------HHHHTTCEE--EECCBCTT-SSBCGGGSGGGCCT-TEEEEEEECG-GGCCC
T ss_pred ccCCCCCEEEECCCccHhHHH--------HHHHCCCEE--EEeccCCC-CCCCHHHHHhhcCc-CceEEEEeCC-cCCcc
Confidence 8999999999987655422 234556644 44556543 47999999998865 6788766655 78888
Q ss_pred CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEEC--CCccCccccEEEEEE-eCCCCchhHHHHHHhh
Q 016668 267 DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTT--THKSLRGPRGGMIFF-KKDPVLGVELESAINN 342 (385)
Q Consensus 267 dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S--~hK~l~GprgG~I~~-~~~~~~~~~~~~~i~~ 342 (385)
|+++|.++|+++|+++++|++|+.|....+ ..+. ..|+++.| .||++ |+..|+++. +++ ++.+++..
T Consensus 136 ~l~~i~~l~~~~~~~li~D~a~~~~~~~~~---~~~~~~~~i~~~s~s~~K~~-~~g~g~~~~~~~~-----~~~~~~~~ 206 (375)
T 2fnu_A 136 EVESVQKLCKKHSLSFLSDSSHALGSEYQN---KKVGGFALASVFSFHAIKPI-TTAEGGAVVTNDS-----ELHEKMKL 206 (375)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTCTTCEETT---EETTSSSSEEEEECCTTSSS-CCSSCEEEEESCH-----HHHHHHHH
T ss_pred CHHHHHHHHHHcCCEEEEECccccCCeECC---eeccccCCeEEEeCCCCCCc-cccCceEEEeCCH-----HHHHHHHH
Confidence 999999999999999999999976644322 1122 23665554 55998 442255555 443 56666654
No 108
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.77 E-value=2.2e-17 Score=164.73 Aligned_cols=240 Identities=17% Similarity=0.124 Sum_probs=157.2
Q ss_pred hccccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 103 KSLELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 103 ~~l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
.-++|..+++ .+++.|++++...+.+....+|+.. .|.+ ++++.+++++.+.+|.+.+ ....+.+.+|++|
T Consensus 45 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~---~lr~~la~~~~~~~g~~~~-~~~i~~t~g~t~a 117 (437)
T 3g0t_A 45 KFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPNL---DGLP---ELKQEASRFAKLFVNIDIP-ARACVPTVGSMQG 117 (437)
T ss_dssp CCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCCT---TCCH---HHHHHHHHHHHHHHCCCCC-GGGEEEESHHHHH
T ss_pred CEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCCC---CChH---HHHHHHHHHHHHhhCCCCC-cccEEEeCCHHHH
Confidence 3455654444 3589999999888764332345442 2333 6777777778777776531 1123444455679
Q ss_pred HHHHHHHhc--cCCC--EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEE
Q 016668 181 NFEVYTAIL--KPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII 256 (385)
Q Consensus 181 ~~~a~~all--~pGD--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi 256 (385)
+..++.+++ +||| +|++.++.|.++.. .+...|..+..++ ++++++.+|+++|++.++..++|+|+
T Consensus 118 l~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~~~~~~d~~~l~~~l~~~~~~~v~ 187 (437)
T 3g0t_A 118 CFVSFLVANRTHKNREYGTLFIDPGFNLNKL--------QCRILGQKFESFD--LFEYRGEKLREKLESYLQTGQFCSII 187 (437)
T ss_dssp HHHHHHHHTTSCTTCSCCEEEEESCCHHHHH--------HHHHHTCCCEEEE--GGGGCTTHHHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHHhcCCCCCccEEEEeCCCcHhHHH--------HHHHcCCEEEEEe--ecCCCCccCHHHHHHHHhcCCceEEE
Confidence 999999998 9999 99999886654321 2345566555555 44445679999999999545789998
Q ss_pred EcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccC--------CC---CCCcEEEECCCccC--cc
Q 016668 257 AGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD--------PF---KYCDVVTTTTHKSL--RG 318 (385)
Q Consensus 257 ~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~--------p~---~gaDiv~~S~hK~l--~G 318 (385)
+..+++| ...+ +++|+++|+++|++||+|++|. ++...+..+. .+ .+.+++++|+||++ +|
T Consensus 188 l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 266 (437)
T 3g0t_A 188 YSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYF-GMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG 266 (437)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTT-TCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchh-hcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc
Confidence 8777765 4454 7788999999999999999985 3333322111 11 13458899999996 67
Q ss_pred ccEEEEEEeCCCCchhHHHH-H-----------------HhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 319 PRGGMIFFKKDPVLGVELES-A-----------------INNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 319 prgG~I~~~~~~~~~~~~~~-~-----------------i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
.|.|++++++ ++.+ . +...... ...+++....++...+++..
T Consensus 267 ~r~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~ 326 (437)
T 3g0t_A 267 QRIGVLMISG------KLYEREYPDLEESFGRLRFGEALSSSALYA-LSSGATHSAQWGMAAMLKAC 326 (437)
T ss_dssp GCCEEEEECH------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHH-HHSSSCHHHHHHHHHHHHHH
T ss_pred ceeEEEEECH------HHhhhhhhcccccccccchhHHHHHHHHhh-hcCCCCHHHHHHHHHHHhCc
Confidence 7889999987 5655 4 4332211 12245555666666677654
No 109
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.77 E-value=4.7e-18 Score=168.53 Aligned_cols=184 Identities=18% Similarity=0.142 Sum_probs=129.1
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
.++++++++|.+. .+.++||++|+..++.++++|||+|++.++.|+++.... .......|..+..++ .
T Consensus 69 l~~~la~~~g~~~-----~i~~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~----~~~~~~~g~~~~~v~--~- 136 (398)
T 2rfv_A 69 LEKKLAVLERGEA-----GLATASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFL----SHSMPKFGINVRFVD--A- 136 (398)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHH----HTHHHHTTCEEEEEC--T-
T ss_pred HHHHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHH----HHHHHHcCCEEEEeC--C-
Confidence 4557889999873 477889999999999999999999999998776542200 001134565444333 3
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEE
Q 016668 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVT 309 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~ 309 (385)
.|++++++.+++ ++++|+++.+++| ...|+++|.++|+++|+++++|++|..+.. ..++. ++|+++
T Consensus 137 -----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~-----~~~~~~~~di~~ 205 (398)
T 2rfv_A 137 -----AKPEEIRAAMRP-ETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYC-----QQPLQLGADIVV 205 (398)
T ss_dssp -----TSHHHHHHHCCT-TEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----CCGGGGTCSEEE
T ss_pred -----CCHHHHHHhcCC-CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----CCchhhCCcEEE
Confidence 289999999865 7899988877664 678999999999999999999999976543 12344 789999
Q ss_pred ECCCccCccc--c-EEEEEEeCCCCchhHHHH-HHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 310 TTTHKSLRGP--R-GGMIFFKKDPVLGVELES-AINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 310 ~S~hK~l~Gp--r-gG~I~~~~~~~~~~~~~~-~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
.|+||+|.|| + ||++++++ ++.+ .+.......-.++++....++...+++
T Consensus 206 ~s~sK~~~~~g~~~~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 259 (398)
T 2rfv_A 206 HSVTKYINGHGDVIGGIIVGKQ------EFIDQARFVGLKDITGGCMSPFNAWLTLRGVK 259 (398)
T ss_dssp EETTTTTTCSSCCCCEEEEECH------HHHHHHHHTHHHHTTCCCCCHHHHHHHHHHHT
T ss_pred EeCcccccCCCCceEEEEEECH------HHHHHHHHHHHHhCCCCCCCHHHHHHHHhhhh
Confidence 9999998765 3 49999887 4443 444322111012444445555555554
No 110
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.77 E-value=9.2e-18 Score=170.28 Aligned_cols=168 Identities=20% Similarity=0.165 Sum_probs=127.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++| +++++++|.+. .+.++||++|+..++.++++|||+|++.++.|++.... +. ..+...|
T Consensus 112 ~~~~~~~l~----~~lA~l~g~~~-----~v~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~--~~--~~~~~~G 178 (445)
T 1qgn_A 112 GNPTTVVLE----EKISALEGAES-----TLLMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIF--IE--TILPKMG 178 (445)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHH--HH--HTGGGGT
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHH--HH--HHHHHcC
Confidence 556555555 46888999863 57789999999999999999999999999877654210 00 0123456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCC-cEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRP-KLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~p-klIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
..+..++ . .|++++++.+++ ++ |+|+++.++|| ...|+++|.++|+++|+++++|++|..+..
T Consensus 179 ~~v~~v~--~------~d~~~l~~ai~~-~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~----- 244 (445)
T 1qgn_A 179 ITATVID--P------ADVGALELALNQ-KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLN----- 244 (445)
T ss_dssp CEEEEEC--S------SCHHHHHHHHHH-SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----
T ss_pred CEEEEeC--C------CCHHHHHHHhcc-CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----
Confidence 5444433 3 289999999976 67 99999877765 678999999999999999999999976532
Q ss_pred cCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhh
Q 016668 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 299 ~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~ 342 (385)
..+++ ++|++++|+||++.|+. +|++++++ ++.+++..
T Consensus 245 ~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~------~l~~~l~~ 286 (445)
T 1qgn_A 245 QKALALGADLVLHSATKFLGGHNDVLAGCISGPL------KLVSEIRN 286 (445)
T ss_dssp CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH------HHHHHHHH
T ss_pred CCccccCCEEEEECCcccccccccceEEEEEECH------HHHHHHHH
Confidence 24556 89999999999997764 89999987 56665543
No 111
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.76 E-value=4.4e-17 Score=161.00 Aligned_cols=223 Identities=18% Similarity=0.069 Sum_probs=143.9
Q ss_pred CcHHHHHHHhhHhhccC--CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC-cHHHHHHHHHHhcc
Q 016668 114 TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y--~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~all~ 190 (385)
+++.+.+++...+.+.. .. |+. ..|. .++++.+.+++.+.+|.+.+ . .+|.+++ |++|+..++.++++
T Consensus 50 ~~~~v~~a~~~~~~~~~~~~~-y~~---~~~~---~~l~~~la~~~~~~~g~~~~-~-~~v~~t~g~t~a~~~~~~~~~~ 120 (407)
T 2zc0_A 50 PRAVLGEIAKEVLEKEPKSVM-YTP---ANGI---PELREELAAFLKKYDHLEVS-P-ENIVITIGGTGALDLLGRVLID 120 (407)
T ss_dssp CHHHHHHHHHHHHHHCGGGGS-CCC---TTCC---HHHHHHHHHHHHHHSCCCCC-G-GGEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhhcccccc-CCC---CCCC---HHHHHHHHHHHHHhcCCCCC-c-ceEEEecCHHHHHHHHHHHhcC
Confidence 67889999887765421 11 222 1133 37887777777777794321 1 1344555 47799999999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhh----h-cCCcEEE-EcCCCC--
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI----L-FRPKLII-AGASAY-- 262 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~----~-~~pklIi-~~~s~~-- 262 (385)
|||+|++.+|.|.++. ..+...|..+..++ .++ ++ +|++++++.++ + .++|+|+ +..+++
T Consensus 121 ~gd~vl~~~p~~~~~~--------~~~~~~g~~~~~v~--~~~-~~-~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~npt 188 (407)
T 2zc0_A 121 PGDVVITENPSYINTL--------LAFEQLGAKIEGVP--VDN-DG-MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPM 188 (407)
T ss_dssp TTCEEEEEESCCHHHH--------HHHHTTTCEEEEEE--EET-TE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTT
T ss_pred CCCEEEEeCCChHHHH--------HHHHHcCCEEEEcc--cCC-CC-CCHHHHHHHHHhhhcccCCceEEEECCCCCCCC
Confidence 9999999988665432 13345676555444 443 33 89999999886 4 2678874 555555
Q ss_pred CCCCCHH---HHHHHHHHcCcEEEEeccccccccccCcccCCC---C--CCcEEEECCCccCc-cccEEEEEEeCCCCch
Q 016668 263 PRDFDYP---RMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLG 333 (385)
Q Consensus 263 ~~~~dl~---~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~--gaDiv~~S~hK~l~-GprgG~I~~~~~~~~~ 333 (385)
|...+.+ +|.++|+++|+++|+|++|..+ ...+..+.++ + +.++++.|+||++. |.|+|++++++
T Consensus 189 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~----- 262 (407)
T 2zc0_A 189 GVTMSMERRKALLEIASKYDLLIIEDTAYNFM-RYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEG----- 262 (407)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTS-BSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCH-----
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEECCCccc-ccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCH-----
Confidence 4566765 9999999999999999998543 3333211112 2 23478999999985 55889999976
Q ss_pred hHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 334 ~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+.....+...+.+ ....++...+++
T Consensus 263 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ 292 (407)
T 2zc0_A 263 -EILKKVLMQKQPIDFCAP-AISQYIALEYLK 292 (407)
T ss_dssp -HHHHHHHHHHTTTTSSSC-HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHhhcCCCC-HHHHHHHHHHHH
Confidence 677777654433333333 333444444554
No 112
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.76 E-value=3.4e-18 Score=169.28 Aligned_cols=235 Identities=16% Similarity=0.142 Sum_probs=146.6
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCC--CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGK--RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI 188 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~--r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al 188 (385)
..+.++.|++++...+.+.+ +++.. ++..|.. .....+++++++++|++.++ .+.+.+|+.++..++.++
T Consensus 37 ~~~~~~~v~~a~~~~l~~~~--~~~~~~~~~~~~~~---~~~~~l~~~la~~~g~~~~~---v~~~~g~t~al~~al~~~ 108 (416)
T 1qz9_A 37 LGARPVAALARAQAVIAEEW--GNGLIRSWNSAGWR---DLSERLGNRLATLIGARDGE---VVVTDTTSINLFKVLSAA 108 (416)
T ss_dssp SCCCBTTHHHHHHHHHHTCC--CCCGGGHHHHTSGG---GHHHHHHHHHHTTTTCCTTS---EEECSCHHHHHHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHH--hccCccccchhhHH---HHHHHHHHHHHHHcCCCccc---EEEeCChhHHHHHHHHhh
Confidence 34678899999988876543 22221 1111211 22223567899999997531 233445566887788877
Q ss_pred c------cCCCEEeec-CCCCCccccCCccccccccccC--cceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 189 L------KPHDRIMGL-DLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 189 l------~pGD~Vl~~-~~~~ggh~s~~~~~~~~~~~~~--g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
+ +|||+|++. ++.|+++.. .+. ...... |..+..++ + +++|++.+++ ++++|++..
T Consensus 109 ~~~~~~~~~gd~vii~~~~~~~~~~~-~~~---~~~~~~~~g~~~~~v~--~--------~~~l~~~i~~-~~~~v~~~~ 173 (416)
T 1qz9_A 109 LRVQATRSPERRVIVTETSNFPTDLY-IAE---GLADMLQQGYTLRLVD--S--------PEELPQAIDQ-DTAVVMLTH 173 (416)
T ss_dssp HHHHHHHSTTCCEEEEETTSCHHHHH-HHH---HHHHHHCSSCEEEEES--S--------GGGHHHHCST-TEEEEEEES
T ss_pred cccccccCCCCcEEEEcCCCCCchHH-HHH---HHHHHhcCCceEEEeC--c--------HHHHHHHhCC-CceEEEEec
Confidence 6 899975444 445543211 000 001112 55444333 2 6788888864 789988877
Q ss_pred CCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccC-ccccE-EEEEEeCCCCch
Q 016668 260 SAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL-RGPRG-GMIFFKKDPVLG 333 (385)
Q Consensus 260 s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l-~Gprg-G~I~~~~~~~~~ 333 (385)
+++ |...|+++|.++|+++|+++++|++|+.|.. +.++. ++|++++|+||++ .|+++ |+++++++
T Consensus 174 ~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~-----~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~---- 244 (416)
T 1qz9_A 174 VNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAV-----PVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQ---- 244 (416)
T ss_dssp BCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTS-----CCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTT----
T ss_pred cccCcccccCHHHHHHHHHHcCCEEEEEccccccCc-----CCChhhcCCCEEEecCcccCCCCCCCeEEEEECHH----
Confidence 665 4678999999999999999999999975532 22232 6899999999997 57888 99999885
Q ss_pred hHHHHHHhhccC----------------------CCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 334 VELESAINNAVF----------------------PGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 334 ~~~~~~i~~~~f----------------------p~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
+.+++..... ....++++...++++..+++.+..+++++..+++
T Consensus 245 --~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~ 310 (416)
T 1qz9_A 245 --LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKS 310 (416)
T ss_dssp --TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred --HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3232321100 0123467778888888888877554444444433
No 113
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.76 E-value=2e-18 Score=174.97 Aligned_cols=248 Identities=14% Similarity=0.133 Sum_probs=151.3
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCC--CCC-----CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLP--GKR-----YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGS-PA 180 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p--~~r-----~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A 180 (385)
++..+.++.|.+++.......+..+.. +.. .+.+.+...++++.+++++++++|++.+ .+++.+|| .+
T Consensus 87 aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~----~~~t~g~te~a 162 (456)
T 2z67_A 87 VRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH----AIATPISTGMS 162 (456)
T ss_dssp EECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE----EEEESSCHHHH
T ss_pred cccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC----EEEeCcHHHHH
Confidence 334456777777766533222221111 000 0112233567888899999999999862 35566677 57
Q ss_pred HHHHHHHhcc--CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHh-hh---cCCcE
Q 016668 181 NFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTA-IL---FRPKL 254 (385)
Q Consensus 181 ~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i-~~---~~pkl 254 (385)
|..++.++.. +||.|++++++|.+.. +.+...|..+..+++....+++.+|+++|++.+ +. .++++
T Consensus 163 ~~~al~~~~~~~~~~~vi~~~~~h~s~~--------~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~ 234 (456)
T 2z67_A 163 ISLCLSAARKKYGSNVVIYPYASHKSPI--------KAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGNRPC 234 (456)
T ss_dssp HHHHHHHHHHHHCCCEEEEECCCCHHHH--------HHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcHHHH--------HHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCCeEE
Confidence 7767776544 7888888887654321 234556776665553211245789999999998 42 36677
Q ss_pred EEEcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc---CCCC-CCcEEEECCCccCcccc-EEEEEEe
Q 016668 255 IIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA---DPFK-YCDVVTTTTHKSLRGPR-GGMIFFK 327 (385)
Q Consensus 255 Ii~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~---~p~~-gaDiv~~S~hK~l~Gpr-gG~I~~~ 327 (385)
|++..++ +|...|+++|.++|+++|+++++|+||+.... |..+ ..+. ++|++++|+||++.||. +|+++++
T Consensus 235 vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~--g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~ 312 (456)
T 2z67_A 235 VLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNN--YYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYST 312 (456)
T ss_dssp EEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH--HHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEES
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHH--HhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEc
Confidence 7666654 46788999999999999999999988753221 1111 1112 68999999999977765 5999996
Q ss_pred CCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHHHHH
Q 016668 328 KDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNKS 379 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~v 379 (385)
++ ++.+.+.. .+.+... ... +.++..++..+...++++..++.
T Consensus 313 ~~-----~~~~~l~~-~~~g~~~--~~~-~~~~~aal~~l~~~~~~~~~~~~ 355 (456)
T 2z67_A 313 DA-----EFIKEISL-SYPGRAS--ATP-VVNTLVSLLSMGSKNYLELVKNQ 355 (456)
T ss_dssp CH-----HHHHHHHT-TSCSCBC--SHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CH-----HHHhhcCc-CCCCCCC--CCH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 56666633 2333221 122 33444455544434444444443
No 114
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.75 E-value=1.5e-17 Score=165.28 Aligned_cols=233 Identities=11% Similarity=0.109 Sum_probs=148.4
Q ss_pred cccCChHHHHHHHHHHHHhhh--c---cccccC-------CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHH
Q 016668 83 LGEADPEVCEIITKEKERQFK--S---LELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELE 150 (385)
Q Consensus 83 l~~~dp~~~~~i~~e~~~~~~--~---l~Lias-------en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le 150 (385)
.+..++.++.++++.+..... + ++|-.+ +..+++.|.+++...... ...+|+. ..|.+ +++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~---~~g~~---~lr 86 (418)
T 3rq1_A 14 GKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAP---IAGIP---DFL 86 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCC---TTCCH---HHH
T ss_pred CCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCC---CCChH---HHH
Confidence 455666788887765554432 2 444333 455688899888654321 1123433 22444 666
Q ss_pred HHHHHHHHHHcCCCCCCCcceee-cCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEec
Q 016668 151 TLCQKRALAAFNLDENKWGVNVQ-PLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (385)
Q Consensus 151 ~~~~~~la~lfg~~~~~~~~~V~-~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~ 229 (385)
+...+++...++.+.. .+|. +.+|++|+..++.++++|||+|++++|.|.++.. .+...|..+..++
T Consensus 87 ~~ia~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~- 154 (418)
T 3rq1_A 87 CAAEKECFGNFRPEGH---IRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRV--------ICSDTGRTLVTYS- 154 (418)
T ss_dssp HHHHHHHHGGGCCSSE---EEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHH--------HHHHTTCEEEEEC-
T ss_pred HHHHHHHhcccCcccc---ccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHH--------HHHHcCCEEEEEe-
Confidence 6666666665565421 1344 4455679999999999999999999987755432 3345676544444
Q ss_pred cccCCCCCCCHHHHHHHhhhc---CCc-EEEEcCC-CCC--CCCCHH---HHHHHHH------HcCcEEEEecccccccc
Q 016668 230 RLDESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AYP--RDFDYP---RMRQIAD------AVGALLMMDMAHISGLV 293 (385)
Q Consensus 230 ~~~~~~~~iD~d~le~~i~~~---~pk-lIi~~~s-~~~--~~~dl~---~I~~ia~------~~ga~livD~ah~~Gli 293 (385)
++++++.+|++++++.+++. +++ +|+++.+ +|| ...+.+ +|+++|+ ++|+++|+|++| .++.
T Consensus 155 -~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y-~~~~ 232 (418)
T 3rq1_A 155 -LFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAY-LDYS 232 (418)
T ss_dssp -SBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTT-GGGS
T ss_pred -eeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccc-cccc
Confidence 54445789999999998652 566 7777766 665 566655 5555665 899999999998 5555
Q ss_pred ccCcc-c---CCCC--CCc---EEEECCCccC--ccccEEEEEE---eCCCCchhHHHHHHhh
Q 016668 294 AASVV-A---DPFK--YCD---VVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINN 342 (385)
Q Consensus 294 ~~g~~-~---~p~~--gaD---iv~~S~hK~l--~GprgG~I~~---~~~~~~~~~~~~~i~~ 342 (385)
..+.. . ..+. ..| ++++|+||++ +|+|.|++++ ++ ++.+.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~------~~~~~~~~ 289 (418)
T 3rq1_A 233 GEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDE------EIADEFFE 289 (418)
T ss_dssp SCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSH------HHHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCH------HHHHHHHH
Confidence 43321 1 1111 223 6789999987 6788899988 44 56665543
No 115
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.75 E-value=4.6e-17 Score=160.75 Aligned_cols=231 Identities=19% Similarity=0.161 Sum_probs=147.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--c
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKR-YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r-~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~ 190 (385)
.+|.|++++...+.+.. .+..+.+ .|+..+...++ ++.+++++|.+. .|.+++|+.++..++.++. +
T Consensus 61 ~~p~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~l----~~~la~~~~~~~-----~i~~~sG~~a~~~~~~~l~~~~ 130 (401)
T 2bwn_A 61 QHPVVLAAMHEALEAVG-AGSGGTRNISGTTAYHRRL----EAEIAGLHQKEA-----ALVFSSAYNANDATLSTLRVLF 130 (401)
T ss_dssp GCHHHHHHHHHHHHHHC-SCCCSBTTTBCCBHHHHHH----HHHHHHHTTCSE-----EEEESCHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcC-CCCCCcCcccCChHHHHHH----HHHHHHHhCCCc-----EEEECCcHHHHHHHHHHHhcCC
Confidence 36789999887775422 1111111 12223433444 457888999753 5677999998888877763 6
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh---cCCcEEEEcCCCC--CCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL---FRPKLIIAGASAY--PRD 265 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~---~~pklIi~~~s~~--~~~ 265 (385)
|||+|++.++.|+++.. .+...|..+..++ .+ |++++++.++. .++++|++..+++ |..
T Consensus 131 ~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~v~--~~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~ 194 (401)
T 2bwn_A 131 PGLIIYSDSLNHASMIE--------GIKRNAGPKRIFR--HN------DVAHLRELIAADDPAAPKLIAFESVYSMDGDF 194 (401)
T ss_dssp TTCEEEEETTCCHHHHH--------HHHHSCCCEEEEC--TT------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCB
T ss_pred CCCEEEECchhhHHHHH--------HHHHcCCeEEEEc--CC------CHHHHHHHHHhhccCCceEEEEecCcCCCCCc
Confidence 99999999887654421 2345566544444 32 78999988863 3678988877665 467
Q ss_pred CCHHHHHHHHHHcCcEEEEeccccccccc-cCc-ccC--CC-CCCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHH
Q 016668 266 FDYPRMRQIADAVGALLMMDMAHISGLVA-ASV-VAD--PF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAI 340 (385)
Q Consensus 266 ~dl~~I~~ia~~~ga~livD~ah~~Gli~-~g~-~~~--p~-~gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i 340 (385)
.|+++|.++|+++|+++++|++|+.|... .|. ... .+ +..|++++|++|+|.+ .||++++++ ++.+.+
T Consensus 195 ~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~-~GG~~~~~~------~~~~~l 267 (401)
T 2bwn_A 195 GPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGV-FGGYIAASA------RMVDAV 267 (401)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCS-CCEEEEECH------HHHHHH
T ss_pred CCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccC-CCCEEecCH------HHHHHH
Confidence 89999999999999999999999866532 111 000 11 1357899999999854 568888876 566655
Q ss_pred hhcc--CCCccCCChHHHHHHHHHHHHHhhCchHHHHHHH
Q 016668 341 NNAV--FPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQNK 378 (385)
Q Consensus 341 ~~~~--fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~~~ 378 (385)
.... +....+.+ +..++++..+++.+...++.+..++
T Consensus 268 ~~~~~~~~~~~~~~-~~~~~a~~~al~~~~~~~~~~~~~~ 306 (401)
T 2bwn_A 268 RSYAPGFIFSTSLP-PAIAAGAQASIAFLKTAEGQKLRDA 306 (401)
T ss_dssp HHHCHHHHTSBCCC-HHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred HHhCcCceecCCCC-HHHHHHHHHHHHHHHhcccHHHHHH
Confidence 4321 11112233 3666777778876654333333333
No 116
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.75 E-value=1.2e-17 Score=167.74 Aligned_cols=168 Identities=21% Similarity=0.241 Sum_probs=126.0
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|...|+ +++..+++++ ++++++|.+. .+.+.||+.|+..++.++++|||+|++.++.|++......
T Consensus 72 ~~~y~r~--~~p~~~~l~~----~la~~~g~~~-----~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~-- 138 (414)
T 3ndn_A 72 HYVYSRY--GNPTVSVFEE----RLRLIEGAPA-----AFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCS-- 138 (414)
T ss_dssp CCCBTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHH--
T ss_pred CcCcCCC--CChHHHHHHH----HHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHH--
Confidence 4444443 5666666654 6888999764 4778899999999999999999999999988766432100
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
......|..+..++ .+ |++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|++|++|++|..
T Consensus 139 --~~~~~~g~~~~~v~--~~------d~~~l~~ai~~-~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~ 207 (414)
T 3ndn_A 139 --EILPRWGVQTVFVD--GD------DLSQWERALSV-PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFAT 207 (414)
T ss_dssp --THHHHTTCEEEEEC--TT------CHHHHHHHTSS-CCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTH
T ss_pred --HHHHHcCcEEEEeC--CC------CHHHHHHhcCC-CCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcc
Confidence 01123566444433 32 89999999965 7899999877765 578999999999999999999999976
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcc---ccEEEEEEeCC
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRG---PRGGMIFFKKD 329 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~G---prgG~I~~~~~ 329 (385)
|.. ..++. ++|+++.|+||+|.| +++|+++++++
T Consensus 208 ~~~-----~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~ 245 (414)
T 3ndn_A 208 PLL-----QQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDRE 245 (414)
T ss_dssp HHH-----CCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHH
T ss_pred ccc-----CCchhcCCCeEeccCCccccCCCCceEEEEEECHH
Confidence 532 24455 789999999999965 55899999874
No 117
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.75 E-value=2.2e-17 Score=164.10 Aligned_cols=169 Identities=22% Similarity=0.268 Sum_probs=126.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..++++ +++++++|.+. .+.++||++|+..++.+++++||+|++.++.|++..... .......|
T Consensus 64 ~~~~~~~l~----~~la~~~g~~~-----~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~----~~~~~~~g 130 (392)
T 3qhx_A 64 GNPTRTALE----AALAAVEDAAF-----GRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLI----DKVFTGWN 130 (392)
T ss_dssp CCHHHHHHH----HHHHHHTTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH----HHTGGGGT
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHH----HHHHHhcC
Confidence 456555555 46889999874 477889999999999999999999999998876542210 01123445
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+..++ . .|++++++.+++ ++++|++..++++ ...|+++|+++|+++|+++++|++|..+.. .
T Consensus 131 ~~~~~v~--~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-----~ 196 (392)
T 3qhx_A 131 VEYTPVA--L------ADLDAVRAAIRP-TTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-----Q 196 (392)
T ss_dssp CEEEEEC--T------TCHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-----C
T ss_pred cEEEEeC--C------CCHHHHHHhhCC-CCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 5444333 3 289999999965 7899998877665 678999999999999999999999865422 2
Q ss_pred CCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.+++ ++|+++.|+||++.|+ ++|+++++++ ++.+.+..
T Consensus 197 ~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~-----~~~~~l~~ 238 (392)
T 3qhx_A 197 QPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDE-----ELDQSFAF 238 (392)
T ss_dssp CGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHH
T ss_pred ChHHhCCcEEEEcCccccCCCCCceEEEEEECcH-----HHHHHHHH
Confidence 3455 7899999999999664 5899999864 56666544
No 118
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.75 E-value=6.1e-18 Score=163.42 Aligned_cols=196 Identities=20% Similarity=0.203 Sum_probs=130.1
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
++++.+++++....... . .|...+...+++ +++++++|.+. .+.++||++|+..++.++++||
T Consensus 15 ~p~~~~~~a~~~~~~~~-------~-~y~~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~~~~~~~~~g 77 (347)
T 1jg8_A 15 KPTEEMRKAMAQAEVGD-------D-VYGEDPTINELE----RLAAETFGKEA-----ALFVPSGTMGNQVSIMAHTQRG 77 (347)
T ss_dssp CCCHHHHHHHHTCCCCC-------G-GGTCCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTT
T ss_pred CCCHHHHHHHhcCCCCC-------c-ccCCChHHHHHH----HHHHHHhCCce-----EEEecCcHHHHHHHHHHhcCCC
Confidence 46788888886432111 1 122334344554 57888999864 4678899999999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCCC---CC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASAY---PR 264 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~~---~~ 264 (385)
|+|+++++.|.+..... ..+...|..+. ++ .+ +++.+|++++++.+++. ++|+|+++.+++ |.
T Consensus 78 d~Vl~~~~~~~~~~~~~-----~~~~~~g~~~~--~v-~~-~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~ 148 (347)
T 1jg8_A 78 DEVILEADSHIFWYEVG-----AMAVLSGVMPH--PV-PG-KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGR 148 (347)
T ss_dssp CEEEEETTCHHHHSSTT-----HHHHHTCCEEE--EE-CE-ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSB
T ss_pred CEEEEcCcchhhhcccc-----chhhccCeEEE--Ee-cC-CCCccCHHHHHHHhccccccccCceEEEEeccccccCCc
Confidence 99999988654321100 01234565443 33 22 35678999999998642 578998877765 44
Q ss_pred CCC---HHHHHHHHHHcCcEEEEeccccccc-cccCcccCCCC-CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHH
Q 016668 265 DFD---YPRMRQIADAVGALLMMDMAHISGL-VAASVVADPFK-YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESA 339 (385)
Q Consensus 265 ~~d---l~~I~~ia~~~ga~livD~ah~~Gl-i~~g~~~~p~~-gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~ 339 (385)
..+ +++|.++|+++|+++++|++|..+. ...+..+.++. ++|.+++|+||++.+|.|++++.++ ++.++
T Consensus 149 ~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~------~~~~~ 222 (347)
T 1jg8_A 149 VVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVGSVVVGDR------DFIER 222 (347)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSCEEEEECH------HHHHH
T ss_pred cCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCceEEEEcCH------HHHHH
Confidence 444 5789999999999999999985432 11222112222 6788888999999888776676665 45555
Q ss_pred H
Q 016668 340 I 340 (385)
Q Consensus 340 i 340 (385)
+
T Consensus 223 ~ 223 (347)
T 1jg8_A 223 A 223 (347)
T ss_dssp H
T ss_pred H
Confidence 4
No 119
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.75 E-value=1.2e-16 Score=157.42 Aligned_cols=187 Identities=18% Similarity=0.180 Sum_probs=133.9
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al- 188 (385)
.....++.+++++...+...+ |+ ..+..+++| +.+++++|.+. .+.++|||.|+..++.++
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~--------~~-~~~~~~~l~----~~la~~~~~~~-----~i~~~sGt~a~~~al~~~~ 70 (390)
T 3b8x_A 9 ASSTWDDLEYKAIQSVLDSKM--------FT-MGEYVKQYE----TQFAKTFGSKY-----AVMVSSGSTANLLMIAALF 70 (390)
T ss_dssp CCCCCCHHHHHHHHHHHHHTC--------CS-SCHHHHHHH----HHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------CC-CChHHHHHH----HHHHHHHCCCc-----EEEECCHHHHHHHHHHHHH
Confidence 556678999999887775421 11 223344444 56888999874 578899999999999998
Q ss_pred ------ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 189 ------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 189 ------l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
++|||+|+++.++|.++.. .+...|..+ +.++++++++.+|+++|++.+++ ++++|++.. ..
T Consensus 71 ~~~~~~~~~g~~Vi~~~~~~~~~~~--------~~~~~g~~~--~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~-~~ 138 (390)
T 3b8x_A 71 FTKKPRLKKGDEIIVPAVSWSTTYY--------PLQQYGLRV--KFVDIDINTLNIDIESLKEAVTD-STKAILTVN-LL 138 (390)
T ss_dssp SSSSCSCCTTCEEEEESSSCHHHHH--------HHHHTTCEE--EEECBCTTTCSBCHHHHHHHCCT-TEEEEEEEC-GG
T ss_pred hhhhcCCCCcCEEEECCCCcHHHHH--------HHHHcCCEE--EEEecCccccCcCHHHHHHHhCc-CCeEEEEEC-Cc
Confidence 8999999999987655422 234566644 44456655688999999999865 688887753 23
Q ss_pred CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECC--CccCccccEEEEEEeCC
Q 016668 263 PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTT--HKSLRGPRGGMIFFKKD 329 (385)
Q Consensus 263 ~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~--hK~l~GprgG~I~~~~~ 329 (385)
+...|+++|.++|+++|+++++|++|+.|....+. .+. ..|+.++|+ +|.+.++.||+++++++
T Consensus 139 g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~g~~~~~~~~s~~~~k~~~~g~gG~~~~~~~ 205 (390)
T 3b8x_A 139 GNPNNFDEINKIIGGRDIILLEDNCESMGATFNNK---CAGTFGLMGTFSSFYSNHIATMEGGCIVTDDE 205 (390)
T ss_dssp GCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSCSSSCEEEEESCH
T ss_pred cChhhHHHHHHHHHHcCCEEEEECcCcccCEECCc---ccccccceEEEEccCCCCCccCCceEEEeCCH
Confidence 45589999999999999999999999877654221 121 236655443 34476678899999874
No 120
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.74 E-value=3.3e-17 Score=162.57 Aligned_cols=231 Identities=17% Similarity=0.133 Sum_probs=145.6
Q ss_pred CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc------C--CCCCCCcceeecCCcHHHHH
Q 016668 111 ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF------N--LDENKWGVNVQPLSGSPANF 182 (385)
Q Consensus 111 en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lf------g--~~~~~~~~~V~~~sGs~A~~ 182 (385)
+..+++.|++++...+......+|+. ..|.. ++++...+++.+.| | ++.+ ..+.+++|++|+.
T Consensus 48 ~~~~~~~v~~a~~~~~~~~~~~~y~~---~~~~~---~lr~~la~~~~~~~~~~~~~~~~~~~~---~v~~~~g~~~al~ 118 (416)
T 1bw0_A 48 NLLTSAAQIKKLKEAIDSQECNGYFP---TVGSP---EAREAVATWWRNSFVHKEELKSTIVKD---NVVLCSGGSHGIL 118 (416)
T ss_dssp CSCCCHHHHHHHHHHHHTTCSSSCCC---TTCCH---HHHHHHHHHHHHHHCCSTTTGGGCCGG---GEEEESHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhhCCccCCcCC---CCCCH---HHHHHHHHHHHhhhcccccCCCCCCcc---eEEEeCChHHHHH
Confidence 35668999999988775432234432 12333 66665555555322 2 3332 1244445567999
Q ss_pred HHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 183 EVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 183 ~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.++.++++|||+|++.+|.|.++.. .+...|..+..++ ++++ ++.+|+++|++.+++ ++++|++..++
T Consensus 119 ~~~~~l~~~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~i~~p~ 187 (416)
T 1bw0_A 119 MAITAICDAGDYALVPQPGFPHYET--------VCKAYGIGMHFYN--CRPENDWEADLDEIRRLKDD-KTKLLIVTNPS 187 (416)
T ss_dssp HHHHHHCCTTCEEEEEESCCTHHHH--------HHHHTTCEEEEEE--EEGGGTTEECHHHHHHHCCT-TEEEEEEESSC
T ss_pred HHHHHhCCCCCEEEEcCCCcHhHHH--------HHHHcCcEEEEee--cCcccCCCCCHHHHHHHhcc-CCeEEEEeCCC
Confidence 9999999999999999987755421 2345676555444 4433 356899999999864 67888776666
Q ss_pred CC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCc----ccCCC---C-C-CcEEEECCCccC--ccccEEEEE
Q 016668 262 YP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV----VADPF---K-Y-CDVVTTTTHKSL--RGPRGGMIF 325 (385)
Q Consensus 262 ~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~----~~~p~---~-g-aDiv~~S~hK~l--~GprgG~I~ 325 (385)
+| ...+ +++|.++|+++|++||+|++|.. +...+. ...++ + . .++++.|+||++ +|.|.|+++
T Consensus 188 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~ 266 (416)
T 1bw0_A 188 NPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAG-MVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLL 266 (416)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTT-CBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEE
T ss_pred CCCCcccCHHHHHHHHHHHHHcCCEEEEEccccc-cccCCCCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEE
Confidence 65 5666 89999999999999999999854 444432 11122 2 1 236789999996 677889999
Q ss_pred EeCC-CCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 326 FKKD-PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 326 ~~~~-~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++++ .. +..+...+..... ...+++....+++..+|+
T Consensus 267 ~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~l~ 304 (416)
T 1bw0_A 267 YVDPHGN-GPSFLEGLKRVGM--LVCGPCTVVQAALGEALL 304 (416)
T ss_dssp EECTTCS-CHHHHHHHHHHHH--HHTCSCHHHHHHHHHHHH
T ss_pred eeCchhh-HHHHHHHHHHHhc--cccCCCcHHHHHHHHHHh
Confidence 8773 11 1123322222110 112455566666666775
No 121
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.74 E-value=1.5e-17 Score=166.14 Aligned_cols=169 Identities=20% Similarity=0.250 Sum_probs=125.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..+++|+ .+++++|.+. .|.++||++|+..++. +++|||+|++.++.|+++... + ...+...|
T Consensus 65 ~~p~~~~l~~----~la~~~g~~~-----~i~~~sG~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~-~---~~~~~~~G 130 (403)
T 3cog_A 65 GNPTRNCLEK----AVAALDGAKY-----CLAFASGLAATVTITH-LLKAGDQIICMDDVYGGTNRY-F---RQVASEFG 130 (403)
T ss_dssp -CHHHHHHHH----HHHHHHTCSE-----EEEESCHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHH-H---HHTGGGGT
T ss_pred CCchHHHHHH----HHHHHhCCCc-----EEEECCHHHHHHHHHH-HhCCCCEEEEeCCCcchHHHH-H---HHHHHHcC
Confidence 4565556665 6788899873 5778999999999998 999999999999988664220 0 00123456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcC-cEEEEeccccccccccCcc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~g-a~livD~ah~~Gli~~g~~ 298 (385)
..+..++ .+ |++++++.+++ ++|+|+++.+++| ...|+++|.++|+++| +++++|++|..+..
T Consensus 131 ~~v~~v~--~~------d~~~l~~~i~~-~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~----- 196 (403)
T 3cog_A 131 LKISFVD--CS------KIKLLEAAITP-ETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYF----- 196 (403)
T ss_dssp CEEEEEC--TT------SHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTT-----
T ss_pred CEEEEEC--CC------CHHHHHHhcCc-CCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccccc-----
Confidence 5444333 32 89999999865 7899998877765 6789999999999999 99999999865532
Q ss_pred cCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhhc
Q 016668 299 ADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 299 ~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
..|++ ++|+++.|+||+|.||. +|+++++++ ++.+++...
T Consensus 197 ~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~-----~l~~~l~~~ 240 (403)
T 3cog_A 197 QRPLALGADISMYSATKYMNGHSDVVMGLVSVNCE-----SLHNRLRFL 240 (403)
T ss_dssp CCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCH-----HHHHHHHHH
T ss_pred CCccccCCeEEEEcChhhccCCCCCeEEEEEECcH-----HHHHHHHHH
Confidence 24555 78999999999998874 599998754 666666543
No 122
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.74 E-value=1e-18 Score=176.74 Aligned_cols=199 Identities=13% Similarity=0.110 Sum_probs=134.6
Q ss_pred HHHHHHHHHHcCCCCCCCcceeecCC-cHHHHHHHHHHhccCCCE---EeecCCCCCccccCCccccccccccCcceEEE
Q 016668 151 TLCQKRALAAFNLDENKWGVNVQPLS-GSPANFEVYTAILKPHDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (385)
Q Consensus 151 ~~~~~~la~lfg~~~~~~~~~V~~~s-Gs~A~~~a~~all~pGD~---Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (385)
+.+++++++++|++.+ +|.+++ ++.++..++.++++|||. |++.++.|.+... .+. ..+...|..+..
T Consensus 114 ~~l~~~la~~~g~~~~----~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~-~~~---~~~~~~G~~~~~ 185 (465)
T 3e9k_A 114 ESIVGLMKDIVGANEK----EIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHY-AIE---SQLQLHGLNIEE 185 (465)
T ss_dssp HHHHGGGHHHHTCCGG----GEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHH-HHH---HHHHHTTCCHHH
T ss_pred HHHHHHHHHHcCCCcC----CEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHH-HHH---HHHHHcCCccee
Confidence 3456789999999864 344454 556888899999887665 9999987754211 110 012334443210
Q ss_pred --Ee-ccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 227 --MP-YRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 227 --i~-~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
+. .+.+ +++.+|++++++.+++ .++++|+++.++| |...|+++|.++|+++|+++++|++|+.|.. +
T Consensus 186 ~~v~~~~~~-~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~-----~ 259 (465)
T 3e9k_A 186 SMRMIKPRE-GEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNV-----E 259 (465)
T ss_dssp HEEEECCCT-TCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTS-----C
T ss_pred eeEEEecCC-CCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCc-----C
Confidence 11 1122 4578999999999963 3678888877665 4678999999999999999999999987643 2
Q ss_pred CCCC--CCcEEEECCCccC-ccccE-EEEEEeCCCCchhHHHHHHhhc--------------c---CC-------CccCC
Q 016668 300 DPFK--YCDVVTTTTHKSL-RGPRG-GMIFFKKDPVLGVELESAINNA--------------V---FP-------GLQGG 351 (385)
Q Consensus 300 ~p~~--gaDiv~~S~hK~l-~Gprg-G~I~~~~~~~~~~~~~~~i~~~--------------~---fp-------~~qg~ 351 (385)
..+. ++|++++|+||++ .||.| |+++.+++ +.+.+... . +. ...|+
T Consensus 260 ~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 333 (465)
T 3e9k_A 260 LYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEK------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISN 333 (465)
T ss_dssp CCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGG------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSC
T ss_pred CchhhcCCCEEEECcccccccCCCceEEEEEcHH------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCC
Confidence 2232 7899999999999 48876 88888774 22211100 0 00 11347
Q ss_pred ChHHHHHHHHHHHHHhhC
Q 016668 352 PHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 352 p~~~~iaala~Al~e~~~ 369 (385)
|+...++++..+++.+..
T Consensus 334 ~~~~~~~a~~aal~~~~~ 351 (465)
T 3e9k_A 334 PPILLVCSLHASLEIFKQ 351 (465)
T ss_dssp CCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 888889999988876544
No 123
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.74 E-value=2.7e-17 Score=158.26 Aligned_cols=165 Identities=14% Similarity=0.142 Sum_probs=123.7
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccc-cccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRR-VSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~-~~~~g~~~~~i~~~~ 231 (385)
.++++++++|.+. .+.++||++|+..++.++++|||+|+++++.|.++.... .. ....|..+..++ .
T Consensus 3 l~~~la~~~g~~~-----~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~--~ 70 (331)
T 1pff_A 3 LEGKIAKLEHAEA-----CAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALF-----EHQLRKFGVEVDFID--M 70 (331)
T ss_dssp HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHH-----HTHHHHTTCEEEEEC--T
T ss_pred HHHHHHHHhCCCe-----EEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHH-----HHHHHhcCCEEEEeC--C
Confidence 3457889999873 577899999999999999999999999998776542210 00 123565444333 2
Q ss_pred cCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCHHHHHHHHHH-cCcEEEEeccccccccccCcccCCCC-CCcE
Q 016668 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADA-VGALLMMDMAHISGLVAASVVADPFK-YCDV 307 (385)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~~dl~~I~~ia~~-~ga~livD~ah~~Gli~~g~~~~p~~-gaDi 307 (385)
+|++++++.+++ ++++|++..+++ |...|+++|.++|++ +|+++++|++|..|... .+++ +.|+
T Consensus 71 ------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~-----~~~~~~~d~ 138 (331)
T 1pff_A 71 ------AVPGNIEKHLKP-NTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILT-----NPLDLGVDI 138 (331)
T ss_dssp ------TSTTHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHC-----CGGGGTCSE
T ss_pred ------CCHHHHHHhhcC-CCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccC-----ChhhcCCcE
Confidence 478899998864 689998877765 467899999999999 99999999999766432 2334 7899
Q ss_pred EEECCCccCccc--c-EEEEEEeCCCCchhHHHHHHhhccCC
Q 016668 308 VTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNAVFP 346 (385)
Q Consensus 308 v~~S~hK~l~Gp--r-gG~I~~~~~~~~~~~~~~~i~~~~fp 346 (385)
+++|+||+|.|| | +|+++++++ ++.+++......
T Consensus 139 ~~~s~~K~~~~~~~r~~G~~~~~~~-----~~~~~l~~~~~~ 175 (331)
T 1pff_A 139 VVHSATKYINGHTDVVAGLVCSRAD-----IIAKVKSQGIKD 175 (331)
T ss_dssp EEEETTTTTSSSSSCCCEEEEECHH-----HHHHHHHTCCCC
T ss_pred EEEECccccCCCCCceEEEEEeCcH-----HHHHHHHHHHHh
Confidence 999999999766 4 789998873 577777665544
No 124
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.74 E-value=5.9e-17 Score=166.01 Aligned_cols=174 Identities=14% Similarity=0.079 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--------CC-----C-EEeecCCCCCccccCC
Q 016668 144 EYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--------PH-----D-RIMGLDLPHGGHLSHG 209 (385)
Q Consensus 144 ~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--------pG-----D-~Vl~~~~~~ggh~s~~ 209 (385)
+...++|+.+.+++++++|++.. ....+++++||+||..++.++.+ +| | +|+++++.|.++.
T Consensus 128 ~~~~~le~~~~~~la~~~g~~~~-~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~--- 203 (504)
T 2okj_A 128 PVFVLMEQITLKKMREIVGWSSK-DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK--- 203 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSS-SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH---
T ss_pred hHHHHHHHHHHHHHHHHhCCCCC-CCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHH---
Confidence 55678999999999999999831 11245567788899999888743 67 6 6887766543321
Q ss_pred ccccccccccCcc---eEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCC--CCCCCCHHHHHHHHHHcC
Q 016668 210 FMTPKRRVSGTSI---YFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASA--YPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 210 ~~~~~~~~~~~g~---~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~--~~~~~dl~~I~~ia~~~g 279 (385)
+.+...|. .+..++ ++ +++.+|+++|++.+++. +|++|++..++ +|...|+++|+++|+++|
T Consensus 204 -----~~~~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g 275 (504)
T 2okj_A 204 -----KAGAALGFGTDNVILIK--CN-ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYN 275 (504)
T ss_dssp -----HHHHHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHT
T ss_pred -----HHHHHcCCCcccEEEEe--cC-CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcC
Confidence 12333443 455555 54 36899999999998653 47888876554 456789999999999999
Q ss_pred cEEEEeccccccccccCcccCCC---CCCcEEEECCCccCcccc-EEEEEEeCC
Q 016668 280 ALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPR-GGMIFFKKD 329 (385)
Q Consensus 280 a~livD~ah~~Gli~~g~~~~p~---~gaDiv~~S~hK~l~Gpr-gG~I~~~~~ 329 (385)
+++++|++|+.+......+...+ +++|++++++||++.+|. .|+++++++
T Consensus 276 ~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~ 329 (504)
T 2okj_A 276 LWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEK 329 (504)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESST
T ss_pred CEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECH
Confidence 99999999976654322221222 368999999999998775 588988875
No 125
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.74 E-value=8.4e-17 Score=162.70 Aligned_cols=257 Identities=13% Similarity=0.040 Sum_probs=158.0
Q ss_pred hhhhhcccCChHHHHHHHHHHHHhhhccccccC----CCCCcHHHHHHHhhHhhccC--CCCCCCCCCCCCcHHHHHHHH
Q 016668 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIAS----ENFTSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELET 151 (385)
Q Consensus 78 ~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Lias----en~~s~~V~~al~s~l~~~y--~~g~p~~r~~~G~~~~~~le~ 151 (385)
+++++.+...+..+..+.+.. ....-|+|-.+ +.++++.+.+++...+.+.. ..+|+. ..|.+ ++++
T Consensus 53 ~~s~~~~~~~~s~~~~~~~~~-~~~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~---~~g~~---~lr~ 125 (448)
T 3aow_A 53 FFSKKALEMRASEVRELLKLV-ETSDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGT---TKGFT---PLRE 125 (448)
T ss_dssp GCCHHHHHCCCCHHHHHHHHH-HTSSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCC---TTCCH---HHHH
T ss_pred HhhHHHhcCCCcHHHHHHHhc-cCCCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCC---CCCcH---HHHH
Confidence 355555555554433332221 12234555322 23367889988877765321 113332 12333 6777
Q ss_pred HHHHHHHHHcCCC-CCCCcceeecCC-cHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEec
Q 016668 152 LCQKRALAAFNLD-ENKWGVNVQPLS-GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY 229 (385)
Q Consensus 152 ~~~~~la~lfg~~-~~~~~~~V~~~s-Gs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~ 229 (385)
.+.+++.+.+|.+ .+ +|.+++ |++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++
T Consensus 126 ~ia~~~~~~~g~~~~~----~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~v~- 192 (448)
T 3aow_A 126 TLMKWLGKRYGISQDN----DIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQ--------AFNFYEPQYIQIP- 192 (448)
T ss_dssp HHHHHHHHHHCCCTTS----EEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH--------HHHTTCCEEEEEE-
T ss_pred HHHHHHHHhcCcCChh----hEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHH--------HHHHcCCEEEEec-
Confidence 7777777777983 32 344444 5679999999999999999999987655421 2345666544444
Q ss_pred cccCCCCCCCHHHHHHHhh----h-cCCcEEE-EcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 230 RLDESTGLVDYDMLEKTAI----L-FRPKLII-AGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 230 ~~~~~~~~iD~d~le~~i~----~-~~pklIi-~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
.++ ++ +|+++|++.++ + .++|+|+ +..++|| ...+ +++|.++|+++|++||+|++|.. +...+..
T Consensus 193 -~~~-~g-~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~-~~~~g~~ 268 (448)
T 3aow_A 193 -LDD-EG-MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGE-LRYSGNP 268 (448)
T ss_dssp -EET-TE-ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTT-CBCSSCC
T ss_pred -cCC-CC-CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-ccCCCCC
Confidence 553 33 89999999986 3 2688875 4555555 4444 67899999999999999999854 4443332
Q ss_pred -cCC--CC--CCcEEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 299 -ADP--FK--YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 299 -~~p--~~--gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++. ++ +.++++.|++|+| +|.|.|++++++ ++.+++.........+ ++....++.+.+|+
T Consensus 269 ~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~------~l~~~l~~~~~~~~~~-~~~~~q~a~~~~L~ 334 (448)
T 3aow_A 269 EKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDP------GIIRKMEIAKQSTDLC-TNVFGQVVAWRYVD 334 (448)
T ss_dssp CCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECH------HHHHHHHHHHHHHHSS-CCHHHHHHHHHHHH
T ss_pred CcCHHhcCCCCCEEEEccchhhccccccEEEEEeCH------HHHHHHHHHHHHhcCC-CCHHHHHHHHHHHH
Confidence 221 22 3457899999998 466789999986 6767665433222222 33344444444554
No 126
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.74 E-value=1.3e-17 Score=161.83 Aligned_cols=207 Identities=12% Similarity=0.082 Sum_probs=136.7
Q ss_pred HhhhccccccCCCCC--cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc
Q 016668 100 RQFKSLELIASENFT--SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG 177 (385)
Q Consensus 100 ~~~~~l~Liasen~~--s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG 177 (385)
++...+.+..++|+. +|.|++++...+.. ..|+..+...+++ +++++++|.+. .+.++||
T Consensus 11 ~~~~~~~~~~~~~~~g~~p~v~~ai~~~~~~---------~~~~~~~~~~~l~----~~la~~~~~~~-----~i~~~~g 72 (359)
T 3pj0_A 11 QKTPYKLGGNGPRNVGVLTEALQNIDDNLES---------DIYGNGAVIEDFE----TKIAKILGKQS-----AVFFPSG 72 (359)
T ss_dssp HTCSEESSSSSCCBHHHHHHHTTTSCTTCBC---------CBTTBSHHHHHHH----HHHHHHHTCSE-----EEEESCH
T ss_pred HhcchhhcCCCccccCCCHHHHHHHHhhccc---------CcccCCHHHHHHH----HHHHHHhCCCc-----EEEeCCH
Confidence 344667777888888 88999988753211 1122234344444 57888999876 3667899
Q ss_pred HHHHHHHHHHhccCCCE--EeecCCCCCccccCCcccccccc-ccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcE
Q 016668 178 SPANFEVYTAILKPHDR--IMGLDLPHGGHLSHGFMTPKRRV-SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (385)
Q Consensus 178 s~A~~~a~~all~pGD~--Vl~~~~~~ggh~s~~~~~~~~~~-~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pkl 254 (385)
+.|+..++.+++++||+ |++.++.|... +.. ..+ ...|.. +++++. +++.+|++++++. ..++|+
T Consensus 73 ~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~--~~~----~~~~~~~g~~--~~~v~~--~~~~~d~~~l~~~--~~~~~~ 140 (359)
T 3pj0_A 73 TMAQQIALRIWADRKENRRVAYHPLSHLEI--HEQ----DGLKELQQIT--PLLLGT--ANQLLTIDDIKSL--REPVSS 140 (359)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECTTCHHHH--SST----THHHHHHCCE--EEECSC--TTSCCCHHHHHTC--SSCCSE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEeccceeee--hhc----chHHHhcCce--EEecCC--cCCCcCHHHHHhc--cCCceE
Confidence 99999999999999997 44444322111 100 011 234553 444434 3578999999987 347999
Q ss_pred EEEcCCCC---CCCCCHH---HHHHHHHHcCcEEEEecccccccc-ccCcccCCC-CCCcEEEECCCccCccccEEEEEE
Q 016668 255 IIAGASAY---PRDFDYP---RMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFF 326 (385)
Q Consensus 255 Ii~~~s~~---~~~~dl~---~I~~ia~~~ga~livD~ah~~Gli-~~g~~~~p~-~gaDiv~~S~hK~l~GprgG~I~~ 326 (385)
|+++++++ +...+.+ +|.++|+++|++|++|++|..+.. ..+..+..+ .++|+++.|+||+|.||.||+++.
T Consensus 141 v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~ 220 (359)
T 3pj0_A 141 VLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIAGAILAG 220 (359)
T ss_dssp EEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSSCEEEEE
T ss_pred EEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcceEEEEC
Confidence 99877654 3455654 559999999999999999865432 112111112 267999999999998887777777
Q ss_pred eCCCCchhHHHHHHhh
Q 016668 327 KKDPVLGVELESAINN 342 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~ 342 (385)
++ ++.+++..
T Consensus 221 ~~------~l~~~~~~ 230 (359)
T 3pj0_A 221 ND------DFVQEAKI 230 (359)
T ss_dssp CH------HHHHHHHH
T ss_pred CH------HHHHHHHH
Confidence 76 67776654
No 127
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.74 E-value=1.7e-17 Score=167.55 Aligned_cols=168 Identities=18% Similarity=0.163 Sum_probs=123.8
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|...|+ +++..+++|+ ++++++|.+. .+.++||+.|+..++.++++|||+|++.++.|++.....
T Consensus 73 ~~~y~r~--~~p~~~~le~----~lA~l~g~~~-----~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~--- 138 (430)
T 3ri6_A 73 GHVYSRS--SNPTVEDLEQ----RLKNLTGALG-----VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLF--- 138 (430)
T ss_dssp ---------CCHHHHHHHH----HHHHHHTCSE-----EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHH---
T ss_pred CccccCC--CCHHHHHHHH----HHHHHHCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHH---
Confidence 3444443 5676666665 6888999875 467889999999999999999999999998876543210
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
...+...|..+..++ .+ |++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|++|++|++|+.
T Consensus 139 -~~~~~~~G~~~~~v~--~~------d~~~l~~ai~~-~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~ 208 (430)
T 3ri6_A 139 -QKTLPSFGIEVRFVD--VM------DSLAVEHACDE-TTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTP 208 (430)
T ss_dssp -HTHHHHTTCEEEEEC--TT------CHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSC
T ss_pred -HHHHHHcCCEEEEeC--CC------CHHHHHHhhCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 002234565444333 32 89999999965 7899999877765 678999999999999999999999976
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCccc---cEEEEEEeCC
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKD 329 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~ 329 (385)
+.. ..+.+ ++|+++.|+||+|.|+ .||+++.+.+
T Consensus 209 ~~~-----~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~ 246 (430)
T 3ri6_A 209 PYL-----LEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGL 246 (430)
T ss_dssp TTT-----CCGGGGTCSEEEEECCCEEETTEEECCEEEEECSC
T ss_pred ccc-----CChHHcCCEEEEECCcccccCCCCceEEEEEECCh
Confidence 543 34555 8999999999999876 6788886543
No 128
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.74 E-value=1.4e-18 Score=169.27 Aligned_cols=245 Identities=13% Similarity=0.050 Sum_probs=149.6
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFE 183 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~-~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~ 183 (385)
+.+.+++..+|+.|++++...+.+.+..|..- ...+.+.. ..++.+.+++++++++|++.+ ..+.+.+.+|++|+..
T Consensus 6 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~la~~~g~~~~-~~~i~~t~g~t~a~~~ 83 (362)
T 2c0r_A 6 YNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAV-YEAVHNEAQARLLALLGNPTG-YKVLFIQGGASTQFAM 83 (362)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHH-HHHHHHHHHHHHHHHTTCCSS-EEEEEESSHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHH-HHHHHHHHHHHHHHHhCCCCC-cEEEEECCCchHHHHH
Confidence 45668888999999999988765432211110 00111222 234555688899999999752 1122333566789999
Q ss_pred HHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCC-CCCHHHHHHHhhhcCCcEEEEcCCCC
Q 016668 184 VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTG-LVDYDMLEKTAILFRPKLIIAGASAY 262 (385)
Q Consensus 184 a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~-~iD~d~le~~i~~~~pklIi~~~s~~ 262 (385)
++.++++|||+|+++++. ++++.+. ..+...| .+..++++.+.+.+ .+|.++++ +++ ++|+|++..+++
T Consensus 84 ~~~~l~~~gd~vl~~~~~---~~~~~~~---~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~-~t~~v~~~~~~n 153 (362)
T 2c0r_A 84 IPMNFLKEGQTANYVMTG---SWASKAL---KEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQD-NAAYLHLTSNET 153 (362)
T ss_dssp HHHHHCCTTCEEEEEECS---HHHHHHH---HHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCT-TEEEEEEESEET
T ss_pred HHHhcCCCCCeEEEEecC---cHhHHHH---HHHHHhC-CeEEEecccccccccCCCHHHcc--cCC-CcCEEEEeCCcC
Confidence 999999999999887643 2222110 1233456 66666643211122 46776654 433 689888766554
Q ss_pred C--C-CCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCchhHHHH
Q 016668 263 P--R-DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELES 338 (385)
Q Consensus 263 ~--~-~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~ 338 (385)
+ . ..|+++| +|+++++|++|..|.. +.++...|++++|+||++ ||.| |+++++++ +.+
T Consensus 154 ~tG~~~~~l~~i------~~~~vivD~a~~~~~~-----~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~------~~~ 215 (362)
T 2c0r_A 154 IEGAQFKAFPDT------GSVPLIGDMSSDILSR-----PFDLNQFGLVYAGAQKNL-GPSGVTVVIVRED------LVA 215 (362)
T ss_dssp TTTEECSSCCCC------TTSCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTT-CCSSCEEEEEEGG------GSS
T ss_pred ccceeccccccc------CCCEEEEEChhhccCC-----ccchhHCcEEEEeccccc-cCcCcEEEEEcHH------HHh
Confidence 4 3 2466665 8999999999976532 222333499999999998 6877 99999885 222
Q ss_pred HHhhc---c--------CCCccCCChHHHHHHHHHHHHHhhCc-hHHHHHHHH
Q 016668 339 AINNA---V--------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFKVYQNKS 379 (385)
Q Consensus 339 ~i~~~---~--------fp~~qg~p~~~~iaala~Al~e~~~~-~~~~y~~~v 379 (385)
++... . .....++++...++++..|++.+... .+++..++.
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 268 (362)
T 2c0r_A 216 ESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQAN 268 (362)
T ss_dssp SCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred hccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 22110 0 01123567777888888899865443 234444333
No 129
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.74 E-value=3.8e-17 Score=166.87 Aligned_cols=202 Identities=14% Similarity=0.052 Sum_probs=137.2
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCC-------cceeecCCcHHHHH
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKW-------GVNVQPLSGSPANF 182 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~-------~~~V~~~sGs~A~~ 182 (385)
+...++..+.+.+.+.+. .... .|...+...++|+.+.+|+++++|.+...+ +..+++++||+||+
T Consensus 87 ~~~~~~~~~~~~~~~~~n-~~~~------~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~ 159 (481)
T 4e1o_A 87 ALTSWPSLLGDMLADAIN-CLGF------TWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTL 159 (481)
T ss_dssp CCCCHHHHHHHHHHHHHC-CCCS------STTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhC-cccC------CcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHH
Confidence 333344555555555543 2211 133456677999999999999999986310 12467788999999
Q ss_pred HHHHHhcc-------------------CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHH
Q 016668 183 EVYTAILK-------------------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDML 243 (385)
Q Consensus 183 ~a~~all~-------------------pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~l 243 (385)
.++.+..+ |+++|++.+..|. +.. +.+.+.|..+..++ ++ +++.+|+++|
T Consensus 160 ~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~---s~~-----~~~~~~g~~~~~v~--~~-~~~~~d~~~L 228 (481)
T 4e1o_A 160 IALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHS---SVE-----KAGLISLVKMKFLP--VD-DNFSLRGEAL 228 (481)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCH---HHH-----HHHHHHTCEEEEEC--CC-TTSCCCHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchH---HHH-----HHHHhCCCceEEEE--cC-CCCcCCHHHH
Confidence 88876632 6788998876543 211 23345566555544 54 4689999999
Q ss_pred HHHhhhcC-----CcEEEEcC--CCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCCcEEEECCC
Q 016668 244 EKTAILFR-----PKLIIAGA--SAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTH 313 (385)
Q Consensus 244 e~~i~~~~-----pklIi~~~--s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~gaDiv~~S~h 313 (385)
++.+++.+ |++|++.. +.++...|+++|+++|+++|+++++|+||+.+..........+ +.+|++++++|
T Consensus 229 e~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~h 308 (481)
T 4e1o_A 229 QKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPS 308 (481)
T ss_dssp HHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHH
T ss_pred HHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChH
Confidence 99996532 66665543 3456788999999999999999999999976644332222212 24699999999
Q ss_pred ccCccccE-EEEEEeCC
Q 016668 314 KSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 314 K~l~Gprg-G~I~~~~~ 329 (385)
|+|.+|.| |+++++++
T Consensus 309 K~l~~p~g~g~l~~~~~ 325 (481)
T 4e1o_A 309 KWMMVHFDCTGFWVKDK 325 (481)
T ss_dssp HHSSCCSSCEEEEESBH
T ss_pred HhcCCCCceEEEEEeCH
Confidence 99998866 77777764
No 130
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.74 E-value=4.8e-17 Score=165.63 Aligned_cols=165 Identities=17% Similarity=0.180 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh----ccCCC-----EEeecCCCCCccccCCccccccc
Q 016668 146 IDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI----LKPHD-----RIMGLDLPHGGHLSHGFMTPKRR 216 (385)
Q Consensus 146 ~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al----l~pGD-----~Vl~~~~~~ggh~s~~~~~~~~~ 216 (385)
..++++.+++++++++|++. +.+++.+|+.|+..++.++ .++|| +|+++++.|+++.. .
T Consensus 105 ~~~l~~~l~~~la~~~g~~~----~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~--------~ 172 (474)
T 1wyu_B 105 ALRLMWELGEYLKALTGMDA----ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPA--------T 172 (474)
T ss_dssp HHHHHHHHHHHHHHHHTCSE----EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHH--------H
T ss_pred HHHHHHHHHHHHHHHHCCCc----eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHH--------H
Confidence 34677778899999999976 2445677888998766554 46998 99999887655431 3
Q ss_pred cccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCC-CCHHHHHHHHHHcCcEEEEeccccccccc
Q 016668 217 VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRD-FDYPRMRQIADAVGALLMMDMAHISGLVA 294 (385)
Q Consensus 217 ~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~-~dl~~I~~ia~~~ga~livD~ah~~Gli~ 294 (385)
+...|..+..++ ++ +++.+|+++|++.+++ ++++|++..++ +|.. .|+++|+++|+++|+++++|++|..+..
T Consensus 173 ~~~~G~~vv~v~--~~-~~~~~d~~~L~~~i~~-~t~~v~~~~pn~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~- 247 (474)
T 1wyu_B 173 ASMAGYQVREIP--SG-PEGEVDLEALKRELGP-HVAALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLNAIM- 247 (474)
T ss_dssp HHHTTCEEEEEC--BC-TTSSBCHHHHHHHCST-TEEEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTT-
T ss_pred HHHCCCEEEEec--CC-CCCCcCHHHHHHhhCC-CceEEEEECCCCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhc-
Confidence 456676555554 54 3678999999999965 67888887654 3555 5899999999999999999999965543
Q ss_pred cCcccCCCC-CCcEEEECCCccCccc------cEEEEEEeCC
Q 016668 295 ASVVADPFK-YCDVVTTTTHKSLRGP------RGGMIFFKKD 329 (385)
Q Consensus 295 ~g~~~~p~~-gaDiv~~S~hK~l~Gp------rgG~I~~~~~ 329 (385)
+.. .+.+ ++|++++|+||+|.+| +.|+++++++
T Consensus 248 -g~~-~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~ 287 (474)
T 1wyu_B 248 -GWA-RPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAH 287 (474)
T ss_dssp -TTC-CHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGG
T ss_pred -cCC-CcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHH
Confidence 111 2222 7899999999998655 6799999884
No 131
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.74 E-value=1.4e-16 Score=163.92 Aligned_cols=173 Identities=13% Similarity=0.058 Sum_probs=125.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-------c-CCC------EEeecCCCCCccccC
Q 016668 143 NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL-------K-PHD------RIMGLDLPHGGHLSH 208 (385)
Q Consensus 143 ~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all-------~-pGD------~Vl~~~~~~ggh~s~ 208 (385)
.+...++|+.+++++++++|++.. ..+++.+||+||..++.++. + +|| +|++.+..|.+..
T Consensus 143 s~~~~~le~~~~~~la~l~g~~~~---~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~-- 217 (515)
T 2jis_A 143 APVFVLMEEEVLRKLRALVGWSSG---DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQ-- 217 (515)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCSSC---EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHH--
T ss_pred chHHHHHHHHHHHHHHHHhCCCCC---CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHH--
Confidence 355668899999999999999843 23556677889998888763 3 687 7888776543321
Q ss_pred CccccccccccCcc---eEEEEeccccCCCCCCCHHHHHHHhhhc-----CCcEEEEcCCC--CCCCCCHHHHHHHHHHc
Q 016668 209 GFMTPKRRVSGTSI---YFESMPYRLDESTGLVDYDMLEKTAILF-----RPKLIIAGASA--YPRDFDYPRMRQIADAV 278 (385)
Q Consensus 209 ~~~~~~~~~~~~g~---~~~~i~~~~~~~~~~iD~d~le~~i~~~-----~pklIi~~~s~--~~~~~dl~~I~~ia~~~ 278 (385)
+.+...|. .+..++ ++ +++.+|+++|++.+++. +|++|++..++ +|...|+++|+++|+++
T Consensus 218 ------~~~~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~ 288 (515)
T 2jis_A 218 ------KGAAFLGLGTDSVRVVK--AD-ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRH 288 (515)
T ss_dssp ------HHHHHTTSCGGGEEEEC--BC-TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHH
T ss_pred ------HHHHHcCCCCCcEEEEe--cC-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHc
Confidence 12334444 455555 54 36789999999998653 47888776554 46678999999999999
Q ss_pred CcEEEEeccccccccccCcccCCCC---CCcEEEECCCccCccccE-EEEEEeCC
Q 016668 279 GALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 279 ga~livD~ah~~Gli~~g~~~~p~~---gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
|+++++|++|+.+......+...+. ++|++++|+||++.+|.| |+++++++
T Consensus 289 g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~ 343 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDT 343 (515)
T ss_dssp TCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCC
T ss_pred CCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeCh
Confidence 9999999999766553322221233 689999999999988865 88888874
No 132
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.74 E-value=3.5e-18 Score=169.85 Aligned_cols=234 Identities=13% Similarity=0.084 Sum_probs=155.1
Q ss_pred cCCCCCcHHHHHHHhhHhhccCCCCCCC-CCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeec--CCcHHHHHHHH
Q 016668 109 ASENFTSRAVMEAVGSCLTNKYSEGLPG-KRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP--LSGSPANFEVY 185 (385)
Q Consensus 109 asen~~s~~V~~al~s~l~~~y~~g~p~-~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~--~sGs~A~~~a~ 185 (385)
++..+.|+.|++++...+.+.+..+... .....+.++.+.+++ +++.++++||++.. . +|.+ .+||.++.+++
T Consensus 19 at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~-ar~~la~ll~~~~~-~--evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 19 YFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINN-TENLVRELLAVPDN-Y--KVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp ECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHH-HHHHHHHHHTCCTT-E--EEEEESSHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCC-C--eEEEEcCchHHHHHHHH
Confidence 6777889999999998887655322111 113335555555555 89999999999752 1 3444 45778999999
Q ss_pred HHhccC--CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC--C
Q 016668 186 TAILKP--HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS--A 261 (385)
Q Consensus 186 ~all~p--GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s--~ 261 (385)
.+++++ ||+|++... |++++.++ +.+...|.. ...++++ .++.+|+++++..+++ ++++|.+... .
T Consensus 95 ~~l~~~~~Gd~v~~~~~---g~~~~~~~---~~a~~~G~~--~~~~~~~-~~~~~~~~~~~~~i~~-~t~lV~~~h~et~ 164 (377)
T 3e77_A 95 LNLIGLKAGRCADYVVT---GAWSAKAA---EEAKKFGTI--NIVHPKL-GSYTKIPDPSTWNLNP-DASYVYYCANETV 164 (377)
T ss_dssp HHHGGGSTTCEEEECCC---SHHHHHHH---HHHTTTSEE--EECSCCC-SSSCSCCCGGGCCCCT-TCSCEEEESEETT
T ss_pred HhccCCCCCCeEEEEEC---CHHHHHHH---HHHHHhCCc--eEEeccC-CCcCCCCChHHhccCC-CccEEEEeCccCc
Confidence 999865 999987654 45555432 223445643 3333343 2345666666665543 6888866443 3
Q ss_pred CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCC-------c-
Q 016668 262 YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV-------L- 332 (385)
Q Consensus 262 ~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~-------~- 332 (385)
+|...|+ +|+++|+++++|++|+.|.. |-.++..|++++|.||++ ||.| |+++.+++.. .
T Consensus 165 tG~~~pi-----i~~~~~~~~~vD~~q~~g~~-----~id~~~~~~~~~s~~K~~-gp~G~g~l~~~~~~l~~~~~~~p~ 233 (377)
T 3e77_A 165 HGVEFDF-----IPDVKGAVLVCDMSSNFLSK-----PVDVSKFGVIFAGAQKNV-GSAGVTVVIVRDDLLGFALRECPS 233 (377)
T ss_dssp TTEECSS-----CCCCTTCCEEEECTTTTTSS-----CCCGGGCSEEEEEGGGTT-SCTTCEEEEEETTSCSCCCTTSCG
T ss_pred hheEchh-----hhccCCCEEEEEcccccCCC-----CCchhhcCEEEEeccccc-CCCccEEEEEcHHHHhhccCCCCc
Confidence 5777787 47889999999999987743 223334568999999999 8988 8888888632 0
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCc
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
+.++....+. ....++|+...++++..|++.+.+.
T Consensus 234 ~~~~~~~~~~---~~~~~Tp~v~~i~~l~~al~~l~~~ 268 (377)
T 3e77_A 234 VLEYKVQAGN---SSLYNTPPCFSIYVMGLVLEWIKNN 268 (377)
T ss_dssp GGCHHHHHTT---TTCSSCCCHHHHHHHHHHHHHHHHT
T ss_pred hhhHHHHhhc---CCCCCCchHHHHHHHHHHHHHHHHc
Confidence 1122222221 2234689999999999999988766
No 133
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.73 E-value=2e-17 Score=164.12 Aligned_cols=232 Identities=11% Similarity=0.064 Sum_probs=143.7
Q ss_pred cCChHHHHHHHHHHHHhh-----hccccccC-------CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHH
Q 016668 85 EADPEVCEIITKEKERQF-----KSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETL 152 (385)
Q Consensus 85 ~~dp~~~~~i~~e~~~~~-----~~l~Lias-------en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~ 152 (385)
..+..++.++++.+.... .-+++-.+ +..+++.|.+++...... ...+|+. ..|.+ ++++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~---~~g~~---~lr~~ 87 (413)
T 3t18_A 15 NGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAP---IEGEK---DYRKI 87 (413)
T ss_dssp CCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCC---TTCCH---HHHHH
T ss_pred CCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCC---CCCCH---HHHHH
Confidence 445567777665433222 22444322 444688898887653211 1123432 22444 56666
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
..+++....+.+..+ ..+.+.+|++|+..++.++++|||+|++.+|.|.++.. .+...|..+..++ ++
T Consensus 88 la~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~~~--~~ 155 (413)
T 3t18_A 88 VIDTLFGPYKPEGYI--SAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRK--------ICEEFGRNFKTFE--FF 155 (413)
T ss_dssp HHHHHHGGGCCSSEE--EEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHH--------HHHHHTCEEEEEC--CB
T ss_pred HHHHHhcccCccccC--cEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHH--------HHHHhCCeEEEee--cc
Confidence 666666655544211 13444556679999999999999999999987655421 2345666544444 53
Q ss_pred CCCCCCCHHHHHHHhhhc---CCc-EEEEcCC-CCC--CCCCHHHH---HHHHH------HcCcEEEEeccccccccccC
Q 016668 233 ESTGLVDYDMLEKTAILF---RPK-LIIAGAS-AYP--RDFDYPRM---RQIAD------AVGALLMMDMAHISGLVAAS 296 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~---~pk-lIi~~~s-~~~--~~~dl~~I---~~ia~------~~ga~livD~ah~~Gli~~g 296 (385)
++++.+|+++|++.+++. +++ +|+++.+ +|| ...+.+++ +++|+ ++|++||+|++| .++...+
T Consensus 156 ~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y-~~~~~~~ 234 (413)
T 3t18_A 156 TDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAY-LEFAGDG 234 (413)
T ss_dssp CTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTT-GGGSSSS
T ss_pred CCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEeccc-ccccCCh
Confidence 345689999999998652 577 7777766 665 56665554 45555 899999999997 5665544
Q ss_pred cccCC-C---C--CCc---EEEECCCccC--ccccEEEEEE---eCCCCchhHHHHHHhh
Q 016668 297 VVADP-F---K--YCD---VVTTTTHKSL--RGPRGGMIFF---KKDPVLGVELESAINN 342 (385)
Q Consensus 297 ~~~~p-~---~--gaD---iv~~S~hK~l--~GprgG~I~~---~~~~~~~~~~~~~i~~ 342 (385)
....+ + . ..| ++++|+||++ +|+|.|++++ ++ ++.+.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~------~~~~~~~~ 288 (413)
T 3t18_A 235 DQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSK------EIIEEFEA 288 (413)
T ss_dssp STTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCH------HHHHHHHH
T ss_pred hhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCH------HHHHHHHH
Confidence 31111 1 1 123 6788999997 5778899988 44 56665544
No 134
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.73 E-value=1.8e-17 Score=163.85 Aligned_cols=234 Identities=11% Similarity=0.056 Sum_probs=155.0
Q ss_pred hccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCC---CCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceee--cCCc
Q 016668 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKR---YYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ--PLSG 177 (385)
Q Consensus 103 ~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r---~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~--~~sG 177 (385)
+.+++.|....+++.|++++...+.+.+. ++.+. .+.+.++.+.+++ +++.++++||++.. -+|. +.+|
T Consensus 5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~--~~~s~~~~~hr~~~~~~~~~~-~r~~la~ll~~~~~---~~v~f~t~~~ 78 (361)
T 3m5u_A 5 RKINFSAGPSTLPLEILEQAQKELCDYQG--RGYSIMEISHRTKVFEEVHFG-AQEKAKKLYELNDD---YEVLFLQGGA 78 (361)
T ss_dssp CCEECCSSSCCCCHHHHHHHHHTSSSGGG--SSSCGGGSCSSSHHHHHHHHH-HHHHHHHHHTCCTT---EEEEEESSHH
T ss_pred ceEeecCCCCCCcHHHHHHHHHHHHhccc--CCceeeccCCCCHHHHHHHHH-HHHHHHHHhCCCCC---ceEEEEcCcH
Confidence 44678899999999999999988765443 33321 2335555555555 89999999999642 1344 4557
Q ss_pred HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCC-CCHHHHHHHhhhcCCcEEE
Q 016668 178 SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-VDYDMLEKTAILFRPKLII 256 (385)
Q Consensus 178 s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~-iD~d~le~~i~~~~pklIi 256 (385)
|.++.+++.+++ +||+++.... |+++|.++. .+...|..+..++ ++.+... ++++. + +++ ++++|.
T Consensus 79 T~a~n~~~~~~~-~~~~~~~i~~---~~~~~~~~~---~a~~~G~~v~~~~--~~~~g~~~~~~~~-~--l~~-~t~lv~ 145 (361)
T 3m5u_A 79 SLQFAMIPMNLA-LNGVCEYANT---GVWTKKAIK---EAQILGVNVKTVA--SSEESNFDHIPRV-E--FSD-NADYAY 145 (361)
T ss_dssp HHHHHHHHHHHC-CSSCEEEEEC---SHHHHHHHH---HHHHTTCCEEEEE--ECTTTTSCSCCCC-C--CCT-TSSEEE
T ss_pred HHHHHHHHHhcC-CCCeEEEEeC---CHHHHHHHH---HHHHcCCceEEEe--cccCcCCCcCChh-h--cCC-CCCEEE
Confidence 789999999999 8997643321 344554421 2234566666666 4432211 45555 3 654 789887
Q ss_pred EcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCch
Q 016668 257 AGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLG 333 (385)
Q Consensus 257 ~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~ 333 (385)
+.... +|...|. |++ +|+++++|++|+.|.. |-.++..|++++|.||++ ||.| |+++.++
T Consensus 146 ~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~-----~id~~~~d~~~~s~~K~~-gp~G~g~l~~~~----- 208 (361)
T 3m5u_A 146 ICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSR-----KVDFSNIALFYGGVQKNA-GISGLSCIFIRK----- 208 (361)
T ss_dssp EESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSS-----CCCCTTEEEEEEETTTTS-SCTTCEEEEEEH-----
T ss_pred EeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCC-----CCCcccCCEEEEechhcc-CCCccEEEEEcH-----
Confidence 65433 3655441 344 4999999999987743 333446899999999998 7998 8888887
Q ss_pred hHHHHHHhhcc------------CCCccCCChHHHHHHHHHHHHHhhCc-hHH
Q 016668 334 VELESAINNAV------------FPGLQGGPHNHTIGGLAVCLKHAQSP-EFK 373 (385)
Q Consensus 334 ~~~~~~i~~~~------------fp~~qg~p~~~~iaala~Al~e~~~~-~~~ 373 (385)
++.+++.... .....++|+...+.++..|++.+.+. +..
T Consensus 209 -~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~ 260 (361)
T 3m5u_A 209 -DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLD 260 (361)
T ss_dssp -HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHH
T ss_pred -HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHH
Confidence 3444432200 11223679999999999999988776 444
No 135
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.73 E-value=3.2e-16 Score=156.61 Aligned_cols=198 Identities=15% Similarity=0.109 Sum_probs=133.6
Q ss_pred HHHHHHHHHHHHHcCCCCCC------CcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccC
Q 016668 148 ELETLCQKRALAAFNLDENK------WGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGT 220 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~------~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~ 220 (385)
++++..++++++.+|.+... . .+|.+++| ++|+..++.++++|||+|++.+|.|.++.. .+...
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~-~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~--------~~~~~ 152 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQ-MDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQ--------SLHPL 152 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTC-EEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH--------HHGGG
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCc-CcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHH--------HHHHc
Confidence 67777788888889987521 0 14555555 569999999999999999999987655421 33456
Q ss_pred cceEEEEeccccCCCCCCCHHHHHHHhhh-----------cCCcEEEE-cCCCCC--CCCC---HHHHHHHHHHcCcEEE
Q 016668 221 SIYFESMPYRLDESTGLVDYDMLEKTAIL-----------FRPKLIIA-GASAYP--RDFD---YPRMRQIADAVGALLM 283 (385)
Q Consensus 221 g~~~~~i~~~~~~~~~~iD~d~le~~i~~-----------~~pklIi~-~~s~~~--~~~d---l~~I~~ia~~~ga~li 283 (385)
|..+..++ +++ + .+|+++|++.++. .++|+|++ ..++|| ...+ +++|.++|+++|++||
T Consensus 153 g~~~~~v~--~~~-~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li 228 (425)
T 2r2n_A 153 GCNIINVA--SDE-S-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLII 228 (425)
T ss_dssp TCEEEEEC--EET-T-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEeC--cCC-C-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 66544444 543 2 4899999998862 35788876 455655 4565 4589999999999999
Q ss_pred EeccccccccccCcc-cCC--CC--CCcEEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHH
Q 016668 284 MDMAHISGLVAASVV-ADP--FK--YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTI 357 (385)
Q Consensus 284 vD~ah~~Gli~~g~~-~~p--~~--gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~i 357 (385)
+|++|. ++.+.+.. ++. ++ +.++++.|+||+| +|+|.|++++++ ++.+.+......... +++....
T Consensus 229 ~De~~~-~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~------~l~~~l~~~~~~~~~-~~~~~~q 300 (425)
T 2r2n_A 229 EDDPYY-FLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPK------PLIERVILHIQVSTL-HPSTFNQ 300 (425)
T ss_dssp EECTTG-GGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEH------HHHHHHHHHHHTTTC-SSCHHHH
T ss_pred EECCcc-cccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCH------HHHHHHHHHHHHhcC-CCCHHHH
Confidence 999984 55544432 221 22 2347899999998 567889999987 576666543322222 3444455
Q ss_pred HHHHHHHHH
Q 016668 358 GGLAVCLKH 366 (385)
Q Consensus 358 aala~Al~e 366 (385)
++++.+|+.
T Consensus 301 ~a~~~~l~~ 309 (425)
T 2r2n_A 301 LMISQLLHE 309 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 555666655
No 136
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.73 E-value=3e-17 Score=158.53 Aligned_cols=190 Identities=15% Similarity=0.111 Sum_probs=127.0
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.+++.|++++...+.. +..+ |+..+ +.+.+++++++++| ... ..+.+++|++|+..++.++++||
T Consensus 19 ~~~~~v~~a~~~~~~~-~~~~------~~~~~----~~~~l~~~la~~~g-~~~---~v~~~~~gt~a~~~al~~~~~~g 83 (356)
T 1v72_A 19 GASPEVAQALVKHSSG-QAGP------YGTDE----LTAQVKRKFCEIFE-RDV---EVFLVPTGTAANALCLSAMTPPW 83 (356)
T ss_dssp CCCHHHHHHHHHTTSS-CCCS------TTCSH----HHHHHHHHHHHHHT-SCC---EEEEESCHHHHHHHHHHTSCCTT
T ss_pred CCCHHHHHHHHhhccC-cccc------cccch----HHHHHHHHHHHHhC-CCC---cEEEeCCccHHHHHHHHHhcCCC
Confidence 4589999998766421 1111 22223 34445678999999 331 13666888899999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccC--cceEEEEeccccCCCCCCCHHHHHH-Hhhhc------CCcEEEEcCCC-C
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEK-TAILF------RPKLIIAGASA-Y 262 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~--g~~~~~i~~~~~~~~~~iD~d~le~-~i~~~------~pklIi~~~s~-~ 262 (385)
|+|++.++.|++....+ .+... |..+. +++.+ ++.+|+++|++ .+++. ++++|++++++ +
T Consensus 84 d~vi~~~~~~~~~~~~~------~~~~~~~g~~~~--~v~~~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~t 153 (356)
T 1v72_A 84 GNIYCHPASHINNDECG------APEFFSNGAKLM--TVDGP--AAKLDIVRLRERTREKVGDVHTTQPACVSITQATEV 153 (356)
T ss_dssp EEEEECTTSHHHHSSTT------HHHHHTTSCEEE--ECCCG--GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTT
T ss_pred CEEEEcCccchhhhhch------HHHHHhCCcEEE--EecCC--CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCCC
Confidence 99999887654432110 12333 65444 43343 36799999999 88642 57888877654 4
Q ss_pred CC---CCCHHHHHHHHHHcCcEEEEeccccccc-cccCcccCCC--C-CCcEEEECCCccCccccE-EEEEEeC
Q 016668 263 PR---DFDYPRMRQIADAVGALLMMDMAHISGL-VAASVVADPF--K-YCDVVTTTTHKSLRGPRG-GMIFFKK 328 (385)
Q Consensus 263 ~~---~~dl~~I~~ia~~~ga~livD~ah~~Gl-i~~g~~~~p~--~-gaDiv~~S~hK~l~Gprg-G~I~~~~ 328 (385)
|. ..++++|.++|+++|++|++|++|..+. ...+..+..+ + ++|++++|+||+ .+|.| |++++++
T Consensus 154 G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~ 226 (356)
T 1v72_A 154 GSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNT 226 (356)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSG
T ss_pred CccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECH
Confidence 55 3458899999999999999999986432 1223222333 2 678999999998 56767 6887766
No 137
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.73 E-value=5e-17 Score=156.91 Aligned_cols=190 Identities=13% Similarity=0.139 Sum_probs=132.7
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.+++.|++++...+. .|..+ . |.. ++++.+++++++++|.+.+ ..+++.+|++|+..++.++++||
T Consensus 25 ~~~~~v~~a~~~~~~-~~~~~------~-g~~---~~~~~~~~~l~~~~g~~~~---~v~~~~g~t~a~~~~~~~~~~~g 90 (359)
T 1svv_A 25 GMHPKILDLMARDNM-TQHAG------Y-GQD---SHCAKAARLIGELLERPDA---DVHFISGGTQTNLIACSLALRPW 90 (359)
T ss_dssp CCCHHHHHHHHHHTT-CCCCS------T-TCS---HHHHHHHHHHHHHHTCTTS---EEEEESCHHHHHHHHHHHHCCTT
T ss_pred CCCHHHHHHHHHHHh-hcccc------c-ccc---HHHHHHHHHHHHHhCCCCc---cEEEeCCchHHHHHHHHHHhCCC
Confidence 568999999987764 23211 1 221 4555677889999998764 13455677889999999999999
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc------CCcEEEEcCCC-CCCC
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF------RPKLIIAGASA-YPRD 265 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~------~pklIi~~~s~-~~~~ 265 (385)
|+|++.++.|.++... ..+...|..+..++ .+ ++.+|+++|++.+++. ++++|++..++ +|..
T Consensus 91 d~vl~~~~~~~~~~~~------~~~~~~g~~~~~v~--~~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~~ptG~~ 160 (359)
T 1svv_A 91 EAVIATQLGHISTHET------GAIEATGHKVVTAP--CP--DGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQ 160 (359)
T ss_dssp EEEEEETTSHHHHSST------THHHHTTCCEEEEC--CT--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSCC
T ss_pred CEEEEcccchHHHHHH------HHHhcCCCeeEEEe--CC--CCeecHHHHHHHHHHHHhccCCCceEEEEEcCCCCcee
Confidence 9999999876554321 01345566555444 43 5789999999999764 27888876653 3566
Q ss_pred CC---HHHHHHHHHHcCcEEEEeccc---cccccccCcccCCC---CCCcEEEECCCccCccccE-EEEEEeCC
Q 016668 266 FD---YPRMRQIADAVGALLMMDMAH---ISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 266 ~d---l~~I~~ia~~~ga~livD~ah---~~Gli~~g~~~~p~---~gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
.+ +++|.++|+++|+++++|++| ..|.. +.....+ ..+|+++.|+||+ .+|.| |+++++++
T Consensus 161 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~d~~~~s~~K~-g~~~~~g~l~~~~~ 231 (359)
T 1svv_A 161 YTKQELEDISASCKEHGLYLFLDGARLASALSSP--VNDLTLADIARLTDMFYIGATKA-GGMFGEALIILNDA 231 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTST--TCCCCHHHHHHHCSEEEEECTTT-TCSSCEEEEECSGG
T ss_pred cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCC--CcchhhhhhhhcCCEEEEecccC-CCCCceEEEEEccc
Confidence 66 899999999999999999998 22221 1111111 1578999999997 56766 88888764
No 138
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.73 E-value=6.5e-17 Score=161.55 Aligned_cols=223 Identities=20% Similarity=0.154 Sum_probs=145.5
Q ss_pred CcHHHHHHHhhHhhccC--CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC---CCCCCcceeecCCc-HHHHHHHHHH
Q 016668 114 TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNL---DENKWGVNVQPLSG-SPANFEVYTA 187 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y--~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~---~~~~~~~~V~~~sG-s~A~~~a~~a 187 (385)
+++.+.+++...+.... ..+|+.. .|.+ ++++...+++.+.+|. +.+ +|.+++| ++|+..++.+
T Consensus 59 ~~~~v~~a~~~~~~~~~~~~~~y~~~---~g~~---~lr~~la~~l~~~~g~~~~~~~----~v~~t~G~~~al~~~~~~ 128 (425)
T 1vp4_A 59 PRKELAEIAKEIIEKEYHYTLQYSTT---EGDP---VLKQQILKLLERMYGITGLDED----NLIFTVGSQQALDLIGKL 128 (425)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTSCCCT---TCCH---HHHHHHHHHHHHHHCCCSCCGG----GEEEEEHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcchhhcCCCCC---CCCH---HHHHHHHHHHHhccCCCCCCcc----cEEEeccHHHHHHHHHHH
Confidence 57889998887765321 1234321 2333 6777777777777794 442 3445554 6699999999
Q ss_pred hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh-------cCCcEE-EEcC
Q 016668 188 ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL-------FRPKLI-IAGA 259 (385)
Q Consensus 188 ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~-------~~pklI-i~~~ 259 (385)
+++|||+|++.+|.|.++.. .+...|..+..++ +++ ++ +|++++++.+++ .++|+| ++..
T Consensus 129 l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~-~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~ 196 (425)
T 1vp4_A 129 FLDDESYCVLDDPAYLGAIN--------AFRQYLANFVVVP--LED-DG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSN 196 (425)
T ss_dssp HCCTTCEEEEEESCCHHHHH--------HHHTTTCEEEEEE--EET-TE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECS
T ss_pred hCCCCCEEEEeCCCcHHHHH--------HHHHcCCEEEEec--cCC-CC-CCHHHHHHHHHhhhhcccCCCceEEEECCC
Confidence 99999999999887654321 2345666555444 543 23 899999998865 268887 4666
Q ss_pred CCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C--CCcEEEECCCccCc-cccEEEEEEeC
Q 016668 260 SAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSLR-GPRGGMIFFKK 328 (385)
Q Consensus 260 s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~--gaDiv~~S~hK~l~-GprgG~I~~~~ 328 (385)
++|| ...+ +++|.++|+++|+++|+|++|.. +...+..+.++ + +.+++++|+||+|. |.|.|++++++
T Consensus 197 ~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~ 275 (425)
T 1vp4_A 197 FHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGA-LRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK 275 (425)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTT-CBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCcc-ccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCH
Confidence 6665 4444 67899999999999999999853 34333221222 1 34588999999984 66889999986
Q ss_pred CCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++.+.+.....+... +++....++...+|+.
T Consensus 276 ------~~~~~l~~~~~~~~~-~~~~~~~~a~~~~l~~ 306 (425)
T 1vp4_A 276 ------EFIRKIVQAKQSADL-CSPAITHRLAARYLER 306 (425)
T ss_dssp ------HHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHhhhhcC-CCCHHHHHHHHHHHhc
Confidence 566666543222222 2344455555566654
No 139
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.73 E-value=1.2e-16 Score=159.86 Aligned_cols=177 Identities=16% Similarity=0.097 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccc-cCcc
Q 016668 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS-GTSI 222 (385)
Q Consensus 148 ~le~~~~~~la~lfg----~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~-~~g~ 222 (385)
++++.+.+++.+.+| ++.+ ..+++.+|++||..++.++++|||+|++.+|.|.++.. .+. ..|.
T Consensus 90 ~l~~~la~~~~~~~~~~~~~~~~---~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~--------~~~~~~g~ 158 (435)
T 3piu_A 90 AFKKAMVDFMAEIRGNKVTFDPN---HLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDR--------DLKWRTGV 158 (435)
T ss_dssp HHHHHHHHHHHHHTTTSSCCCGG---GEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH--------HTTTTTCC
T ss_pred HHHHHHHHHHHHhhCCCCCCCHH---HEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHH--------HHHHhcCC
Confidence 677776666666655 4443 23445566779999999999999999999987765421 222 4566
Q ss_pred eEEEEeccccCC-CCCCCHHHHHHHhhh-----cCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEecccccc
Q 016668 223 YFESMPYRLDES-TGLVDYDMLEKTAIL-----FRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 223 ~~~~i~~~~~~~-~~~iD~d~le~~i~~-----~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~G 291 (385)
.+..++ .+++ .+.+|+++|++.+++ .++|+|++..+++| ...+ +++|+++|+++|++||+|++|. +
T Consensus 159 ~~~~~~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~-~ 235 (435)
T 3piu_A 159 EIVPIH--CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYS-G 235 (435)
T ss_dssp EEEEEE--CCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG-G
T ss_pred EEEEee--CCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEecccc-c
Confidence 554444 4432 346899999999865 26788888777765 3444 6888899999999999999984 4
Q ss_pred ccccCcccCCC-C---C---------Cc--EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 292 LVAASVVADPF-K---Y---------CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 292 li~~g~~~~p~-~---g---------aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+.+.+....++ . . .| +++.|+||+| +|.|.|+++++++ ++.+.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~-----~~~~~~~~~ 299 (435)
T 3piu_A 236 TAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDD-----MVVAAATKM 299 (435)
T ss_dssp GCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCH-----HHHHHHHHH
T ss_pred cccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCH-----HHHHHHHHH
Confidence 33333211111 1 1 23 7889999998 6778999999664 566666544
No 140
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.73 E-value=7.7e-17 Score=159.82 Aligned_cols=176 Identities=19% Similarity=0.176 Sum_probs=128.2
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|...|+ +++..++++ +++++++|.+. .+.++||+.|+..++.+++++||+|++.++.|++.....
T Consensus 50 ~~~y~~~--~~~~~~~l~----~~la~~~g~~~-----~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~--- 115 (389)
T 3acz_A 50 GHIYSRL--GNPTVEQFE----EMVCSIEGAAG-----SAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLF--- 115 (389)
T ss_dssp CCCBTTT--CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHH---
T ss_pred CcccCCC--CChHHHHHH----HHHHHHhCCCe-----EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHH---
Confidence 3444443 456555555 46888999873 467889999999999999999999999998776542100
Q ss_pred cccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccc
Q 016668 213 PKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~ 290 (385)
...+...|..+..++ . .|++++++.+++ ++++|++..+++| ...|+++|.++|+++|+++++|++|..
T Consensus 116 -~~~~~~~g~~~~~v~--~------~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~ 185 (389)
T 3acz_A 116 -THWLPRFGIEVDLID--T------SDVEKVKAAWKP-NTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTS 185 (389)
T ss_dssp -HHHHHHTTCEEEEEC--T------TCHHHHHHTCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC
T ss_pred -HHHHHHcCCEEEEEC--C------CCHHHHHHhcCC-CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc
Confidence 001234565444433 2 489999999865 6899998877664 678999999999999999999999965
Q ss_pred cccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEeCCCCchhHHHHHHhh
Q 016668 291 GLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 291 Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+.. ..+++ ++|+++.|+||++.||. +|+++++++ ++.+++..
T Consensus 186 ~~~-----~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~-----~~~~~l~~ 231 (389)
T 3acz_A 186 PCF-----LKPLELGADIALHSVSKYINGHGDVIGGVSSAKTA-----EDIATIKF 231 (389)
T ss_dssp TTT-----CCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSH-----HHHHHHHH
T ss_pred ccc-----cCccccCCeEEEECChhhccCCCCceeEEEEECcH-----HHHHHHHH
Confidence 532 13445 78999999999997764 499998873 35555543
No 141
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.73 E-value=5.2e-18 Score=171.72 Aligned_cols=195 Identities=13% Similarity=0.111 Sum_probs=128.6
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
+++++++ ||++. .+.+++| |+|+..++.++++|||+|++.++.|.++.. .+...|..+..++...
T Consensus 62 ~~~~la~-~g~~~-----~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~--------~~~~~G~~~~~v~~~~ 127 (446)
T 2x3l_A 62 SMKQVEK-HSDYD-----GYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLH--------ALDISQQEGHFIETHQ 127 (446)
T ss_dssp HHHHHCS-CTTEE-----EEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHH--------HHHHHTCCEEECEEEE
T ss_pred HHHHHHh-cCCCc-----eEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHH--------HHHHcCCeEEEEeCee
Confidence 5567889 99873 3455555 579999999999999999999886654321 3345566554444322
Q ss_pred cCCC---CCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCc
Q 016668 232 DEST---GLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCD 306 (385)
Q Consensus 232 ~~~~---~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaD 306 (385)
+++. +.+|++++ +. .++|+|++..++ +|...|+++|.++|+++|+++++|++|+..+.+.+...+... ++|
T Consensus 128 ~~~~~~~~~~d~~~l---~~-~~~~~v~~~~~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~D 203 (446)
T 2x3l_A 128 SPLTNHYNKVNLSRL---NN-DGHKLVVLTYPNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQAD 203 (446)
T ss_dssp CTTTSSEEEEEC-----------CCEEEEESSCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCS
T ss_pred ccccCcCCCCCHHHH---cC-CCceEEEEECCCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCC
Confidence 4221 45788877 32 368888776554 577889999999999999999999999764433333112223 789
Q ss_pred EEEECCCccCccc-cEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhC
Q 016668 307 VVTTTTHKSLRGP-RGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 307 iv~~S~hK~l~Gp-rgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~ 369 (385)
++++|+||++.|+ ++|+++++++.+ + ...+.........++++...++++..+++.+..
T Consensus 204 i~~~S~~K~l~~~~g~g~l~~~~~~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~ 263 (446)
T 2x3l_A 204 YVVQSFHKTLPALTMGSVLYIHKNAP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKT 263 (446)
T ss_dssp EEEECHHHHSSSCTTCEEEEEETTCT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCccccccccccEEEEEcCCcC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 9999999988776 569999988632 2 223322211223456788888888888776654
No 142
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.73 E-value=1.5e-16 Score=158.64 Aligned_cols=177 Identities=14% Similarity=0.099 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHcC----CCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcc
Q 016668 148 ELETLCQKRALAAFN----LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (385)
Q Consensus 148 ~le~~~~~~la~lfg----~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (385)
++++.+.+++.+.+| ++.+ +|.+++| ++|+..++.++++|||+|++.+|.|.++.. . .....|.
T Consensus 87 ~lr~~la~~~~~~~g~~~~~~~~----~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~-~------~~~~~g~ 155 (428)
T 1iay_A 87 EFRKAIAKFMEKTRGGRVRFDPE----RVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR-D------LRWRTGV 155 (428)
T ss_dssp HHHHHHHHHHHHHTTTCSCCCTT----SCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH-H------TTTTTCC
T ss_pred HHHHHHHHHHHHhcCCCCCCChh----hEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH-H------HHHhcCC
Confidence 677777777777777 4443 3445555 569999999999999999999987765421 0 1124566
Q ss_pred eEEEEeccccCC-CCCCCHHHHHHHhhh-----cCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEecccccc
Q 016668 223 YFESMPYRLDES-TGLVDYDMLEKTAIL-----FRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 223 ~~~~i~~~~~~~-~~~iD~d~le~~i~~-----~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~G 291 (385)
.+..++ .+++ ++.+|++++++.++. .++|+|++..++|| ...+ +++|.++|+++|++||+|++|..
T Consensus 156 ~~~~v~--~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~- 232 (428)
T 1iay_A 156 QLIPIH--CESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAA- 232 (428)
T ss_dssp EEEEEC--CCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGG-
T ss_pred EEEEee--cCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccc-
Confidence 544444 4432 347899999998864 25788887766664 5677 89999999999999999999854
Q ss_pred ccccCc-ccCC--CC-C-------Cc--EEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 292 LVAASV-VADP--FK-Y-------CD--VVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 292 li~~g~-~~~p--~~-g-------aD--iv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
+.+.+. +++. +. . .| +++.|+||+| +|.|.|+++++++ ++.+.+...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~-----~~~~~~~~~ 294 (428)
T 1iay_A 233 TVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFND-----DVVNCARKM 294 (428)
T ss_dssp GCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCH-----HHHHHHHHH
T ss_pred cccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCH-----HHHHHHHHH
Confidence 333322 1111 11 2 67 7899999998 6788899998543 566666544
No 143
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.73 E-value=1.1e-18 Score=174.04 Aligned_cols=238 Identities=12% Similarity=0.076 Sum_probs=146.9
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCC---CCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceee-cCCcHHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGK---RYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPA 180 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~---r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~-~~sGs~A 180 (385)
....|....+++.|++++...+.+.+. ++.+ ..+.+.++.+.+++ +++.++++||++.. . -.++ +.+||.+
T Consensus 29 yl~~agpt~~p~~V~~a~~~~~~~~~~--n~~s~~~~~h~~~~~~~~~~~-ar~~la~ll~~~~~-~-evif~t~~~T~a 103 (386)
T 3qm2_A 29 FNFSSGPAMLPAEVLKLAQQELCDWHG--LGTSVMEISHRGKEFIQVAEE-AEQDFRDLLNIPSN-Y-KVLFCHGGGRGQ 103 (386)
T ss_dssp EECCSSSCCCCHHHHHHHTCC-------------------------CCHH-HHHHHHHHHTCCTT-E-EEEEEESCTTHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHhccc--cCccccccCCCCHHHHHHHHH-HHHHHHHHhCCCCC-c-eEEEEcCCchHH
Confidence 345588999999999999987765443 3322 11224444445554 78999999999642 1 1233 3578899
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCC-CCHHHHHHHhhhcCCcEEEEcC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-VDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~-iD~d~le~~i~~~~pklIi~~~ 259 (385)
+..++.+++++||+|++... ++++|.++. .+...| .+.+++.+. ++.+. +|++++++.+++ ++++|.+..
T Consensus 104 ~n~ai~~l~~~gd~v~~~~~---~~~~~~~~~---~a~~~G-~v~~v~~~~-~~~G~~~~~~~~~~~l~~-~t~lV~~~h 174 (386)
T 3qm2_A 104 FAGVPLNLLGDKTTADYVDA---GYWAASAIK---EAKKYC-APQIIDAKI-TVDGKRAVKPMREWQLSD-NAAYLHYCP 174 (386)
T ss_dssp HHHHHHHHCTTCCEEEEEES---SHHHHHHHH---HHTTTS-EEEEEECEE-EETTEEEECCGGGCCCCT-TCSCEEECS
T ss_pred HHHHHHhccCCCCeEEEEeC---CHHHHHHHH---HHHHhC-CeEEEecCc-ccCCCCCCchHHHhhcCC-CCcEEEEEC
Confidence 99999999999999876553 455554421 233456 566666330 11343 777788777754 788887654
Q ss_pred CC--CCCC-CCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCC----
Q 016668 260 SA--YPRD-FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPV---- 331 (385)
Q Consensus 260 s~--~~~~-~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~---- 331 (385)
.. +|.. .|+++|. +|+++++|++|+.|.. |-.++..|++++|.||++ ||.| |+++.+++..
T Consensus 175 ~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~-----pidv~~~~~~~~s~hK~l-GP~G~g~l~v~~~~~~~~~ 243 (386)
T 3qm2_A 175 NETIDGIAIDETPDFG-----PEVVVTADFSSTILSA-----PLDVSRYGVIYAGAQKNI-GPAGLTLVIVREDLLGKAH 243 (386)
T ss_dssp EETTTTEECCCCCCCC-----TTCCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTT-CCTTEEEEEEEGGGCSCCC
T ss_pred CcCCcCEecCchhhhc-----CCCEEEEEcccccCCC-----CCCccccCEEEEeccccc-CCCccEEEEECHHHHhhhc
Confidence 33 4774 7888875 7999999999987743 333334568889999998 7998 8888887631
Q ss_pred ---c-hhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCc
Q 016668 332 ---L-GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 332 ---~-~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
. +.++....+.... .++|+...++++..|++.+.+.
T Consensus 244 ~~~p~~~~~~~~~~~~~~---~gTp~v~~i~~l~~Al~~~~~~ 283 (386)
T 3qm2_A 244 ESCPSILDYTVLNDNDSM---FNTPPTFAWYLSGLVFKWLKAQ 283 (386)
T ss_dssp TTSCGGGCHHHHHHC----------CCSHHHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHhhcCCC---CCCCcHHHHHHHHHHHHHHHHh
Confidence 0 1112222222222 2468888999999999887665
No 144
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.72 E-value=1.3e-16 Score=160.54 Aligned_cols=225 Identities=18% Similarity=0.175 Sum_probs=139.4
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCC
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPH 192 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pG 192 (385)
.+++.+.+++... .. .|...+...+++ +.+++++|.+. .+.+++|++|+..++.++++||
T Consensus 55 ~~~~~~~~a~~~~-~~----------~y~~~~~~~~l~----~~la~~~~~~~-----~~~~~~gt~a~~~al~~l~~~g 114 (456)
T 2ez2_A 55 AMSDKQWAGMMMG-DE----------AYAGSENFYHLE----RTVQELFGFKH-----IVPTHQGRGAENLLSQLAIKPG 114 (456)
T ss_dssp CCCHHHHHHHTTC-CC----------CSSSCHHHHHHH----HHHHHHHCCSE-----EEEESSHHHHHHHHHHHHCCTT
T ss_pred cCCHHHHHHhhcc-hh----------hcccChhHHHHH----HHHHHHhCCCc-----EEEeCCcHHHHHHHHHHhCCCC
Confidence 3468888887511 01 122334444555 46788888864 4677889999999999999999
Q ss_pred CEEeecCCCC-CccccCCccccccccccCcceEEEEeccccC----C-----CCCCCHHHHHHHhhhcC---CcEEEEcC
Q 016668 193 DRIMGLDLPH-GGHLSHGFMTPKRRVSGTSIYFESMPYRLDE----S-----TGLVDYDMLEKTAILFR---PKLIIAGA 259 (385)
Q Consensus 193 D~Vl~~~~~~-ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~----~-----~~~iD~d~le~~i~~~~---pklIi~~~ 259 (385)
| +++++.| +.+. ..+...|..+..++ +++ + ++.+|+++|++.+++.+ +++|++++
T Consensus 115 d--i~~~~~~~~~~~--------~~~~~~G~~~~~v~--~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~ 182 (456)
T 2ez2_A 115 Q--YVAGNMYFTTTR--------YHQEKNGAVFVDIV--RDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAV 182 (456)
T ss_dssp C--EEEESSCCHHHH--------HHHHHTTCEEEECB--CGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEES
T ss_pred C--EeccccccchhH--------HHHHHcCCEEEEec--ccccccccccccccCCCCHHHHHHHHHhccccceeEEEEec
Confidence 9 5566654 3211 13445676544443 442 2 25789999999986532 37888875
Q ss_pred CCC---CCCCC---HHHHHHHHHHcCcEEEEecccccc---------ccccCcccC----CC-CCCcEEEECCCccCccc
Q 016668 260 SAY---PRDFD---YPRMRQIADAVGALLMMDMAHISG---------LVAASVVAD----PF-KYCDVVTTTTHKSLRGP 319 (385)
Q Consensus 260 s~~---~~~~d---l~~I~~ia~~~ga~livD~ah~~G---------li~~g~~~~----p~-~gaDiv~~S~hK~l~Gp 319 (385)
+++ |...+ +++|+++|+++|++||+|++|..| +...+.... .+ ...|++++|+||++..+
T Consensus 183 p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~ 262 (456)
T 2ez2_A 183 TVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN 262 (456)
T ss_dssp SBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS
T ss_pred cCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC
Confidence 554 34555 999999999999999999999765 333332110 01 25688888899986556
Q ss_pred cEEEEEEeCCCCchhHHHHHHhhccC--CC--ccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 320 RGGMIFFKKDPVLGVELESAINNAVF--PG--LQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 320 rgG~I~~~~~~~~~~~~~~~i~~~~f--p~--~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
+||+++++++ ++.+.+..... .+ ..++.+...+++++.++.+...+++.+
T Consensus 263 ~gG~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~~~~~~ 316 (456)
T 2ez2_A 263 IGGFLCMNDD-----EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYIE 316 (456)
T ss_dssp SCEEEEESCH-----HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHHHH
T ss_pred ceeEEEECCH-----HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhHHHHHH
Confidence 7999998543 56555533211 11 122333334555455554444334433
No 145
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.72 E-value=3.7e-17 Score=161.40 Aligned_cols=218 Identities=17% Similarity=0.065 Sum_probs=138.0
Q ss_pred CcHHHHHHHhhHhhccC--CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhcc
Q 016668 114 TSRAVMEAVGSCLTNKY--SEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y--~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~ 190 (385)
+++.+.+++...+.... ..+|+.. .|.+ ++++ .+++++|++.+ +|.+++| ++|+..++.++++
T Consensus 48 ~~~~v~~a~~~~~~~~~~~~~~y~~~---~~~~---~l~~----~la~~~g~~~~----~v~~~~g~~~al~~~~~~~~~ 113 (397)
T 2zyj_A 48 PKEEAAEAAARILREKGEVALQYSPT---EGYA---PLRA----FVAEWIGVRPE----EVLITTGSQQALDLVGKVFLD 113 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCCT---TCCH---HHHH----HHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHhcchhhhCCCCC---CCCH---HHHH----HHHHHhCCChh----hEEEeccHHHHHHHHHHHhCC
Confidence 57889999877765311 1233321 1322 4554 56677787653 3445555 5699999999999
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEE-EcCCCCC--CCCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAYP--RDFD 267 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi-~~~s~~~--~~~d 267 (385)
|||+|++.+|.|.++.. .+...|..+..++ .++ ++ +|++++++.+++.++|+|+ +..+++| ...+
T Consensus 114 ~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~--~~~-~~-~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~ 181 (397)
T 2zyj_A 114 EGSPVLLEAPSYMGAIQ--------AFRLQGPRFLTVP--AGE-EG-PDLDALEEVLKRERPRFLYLIPSFQNPTGGLTP 181 (397)
T ss_dssp TTCEEEEEESCCHHHHH--------HHHTTCCEEEEEE--EET-TE-ECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCC
T ss_pred CCCEEEEeCCCcHHHHH--------HHHHcCCEEEecC--cCC-CC-CCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCC
Confidence 99999999887655321 2345566554444 443 33 8999999998765788874 5555554 4555
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCc------EEEECCCccCc-cccEEEEEEeCCCCchhH
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCD------VVTTTTHKSLR-GPRGGMIFFKKDPVLGVE 335 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaD------iv~~S~hK~l~-GprgG~I~~~~~~~~~~~ 335 (385)
+++|.++|+++|+++|+|++|.. +...|..+.++. +.| +++.|+||++. |.|.|++++++ +
T Consensus 182 ~~~l~~l~~~~~~~~~~li~De~~~~-~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~------~ 254 (397)
T 2zyj_A 182 LPARKRLLQMVMERGLVVVEDDAYRE-LYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP------E 254 (397)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTTT-CBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCH------H
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCccc-ccCCCCCCCchhhhCcccCCCeEEEEecccccccccceeEEEecCH------H
Confidence 45899999999999999999854 333332211221 222 78999999985 56789999986 5
Q ss_pred HHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 336 LESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 336 ~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+.+.+.........+. +....++...+++
T Consensus 255 ~~~~l~~~~~~~~~~~-~~~~~~a~~~~l~ 283 (397)
T 2zyj_A 255 ALQKLVQAKQGADLHT-PMLNQMLVHELLK 283 (397)
T ss_dssp HHHHHHHHHHHHHSSC-CHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCC-CHHHHHHHHHHHH
Confidence 7666654332222233 3333444444554
No 146
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.72 E-value=2.2e-16 Score=157.39 Aligned_cols=231 Identities=17% Similarity=0.160 Sum_probs=144.6
Q ss_pred hhhhcccCChHH-HHHHHHHHHHhh-hccccccC-----C--CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHH
Q 016668 79 VDYSLGEADPEV-CEIITKEKERQF-KSLELIAS-----E--NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDEL 149 (385)
Q Consensus 79 ~~~~l~~~dp~~-~~~i~~e~~~~~-~~l~Lias-----e--n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~l 149 (385)
+.+++...++.. +.+......... .-++|-.+ + .++++.|.+++...+.+....+|+. ..|.+ ++
T Consensus 24 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~---~l 97 (420)
T 4f4e_A 24 LFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLP---IDGIA---AY 97 (420)
T ss_dssp TTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCC---TTCCH---HH
T ss_pred HhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCC---CCCcH---HH
Confidence 356677777764 444444332222 34566544 2 2234899999988776533334543 23443 56
Q ss_pred HHHHHHHHHHHcCC--CCCCCcceeecCCcHHHHHHH--HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEE
Q 016668 150 ETLCQKRALAAFNL--DENKWGVNVQPLSGSPANFEV--YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE 225 (385)
Q Consensus 150 e~~~~~~la~lfg~--~~~~~~~~V~~~sGs~A~~~a--~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~ 225 (385)
++.+++++....+. +++.+ ..+++.+|++|+..+ +.++++|||+|++.+|.|.++.. .+...|..+.
T Consensus 98 r~~ia~~l~~~~~~~~~~~~~-~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~ 168 (420)
T 4f4e_A 98 DASVQKLLLGDDSPLIAAGRV-VTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRA--------LFDMAGFEVV 168 (420)
T ss_dssp HHHHHHHHHCTTCHHHHTTCE-EEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHH--------HHHHTTCCEE
T ss_pred HHHHHHHhcCCCccccccCce-EEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHH--------HHHHcCCeEE
Confidence 65544444333331 12100 124445566799888 55778999999999987755421 3445676655
Q ss_pred EEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCc-
Q 016668 226 SMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV- 297 (385)
Q Consensus 226 ~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~- 297 (385)
.+++. +++++.+|++++++.++. .++++|+++.++||+ .. ++++|+++|+++|+++++|++| .++..++.
T Consensus 169 ~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y-~~~~~~~~~ 246 (420)
T 4f4e_A 169 AYPYY-DAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAY-QGFGESIEA 246 (420)
T ss_dssp EEECE-ETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TTSSSCTTG
T ss_pred Eeeee-ccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccc-ccccCCcch
Confidence 55531 334678999999999964 246788888777763 33 3778999999999999999997 55554321
Q ss_pred -ccC--CC---CCCcEEEECCCccC--ccccEEEEEE
Q 016668 298 -VAD--PF---KYCDVVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 298 -~~~--p~---~gaDiv~~S~hK~l--~GprgG~I~~ 326 (385)
.+. .+ ...++++.|+||++ +|+|.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~ 283 (420)
T 4f4e_A 247 DAAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSI 283 (420)
T ss_dssp GGHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEE
T ss_pred hhHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEE
Confidence 111 01 13357899999998 4889999865
No 147
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.72 E-value=1.3e-16 Score=162.85 Aligned_cols=177 Identities=12% Similarity=-0.024 Sum_probs=126.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCCCCC------CcceeecCCcHHHHHHHHHHhc-------------------cCCCEE
Q 016668 141 GGNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTAIL-------------------KPHDRI 195 (385)
Q Consensus 141 ~G~~~~~~le~~~~~~la~lfg~~~~~------~~~~V~~~sGs~A~~~a~~all-------------------~pGD~V 195 (385)
...+...++|+.+.+|+++++|.+... .+..+++++||+||+.++.+.. .|+++|
T Consensus 106 ~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v 185 (475)
T 3k40_A 106 IASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVG 185 (475)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEE
T ss_pred cCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEE
Confidence 345677799999999999999998521 1124677889999998887652 245788
Q ss_pred eecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcC-----CcEEEEcC--CCCCCCCCH
Q 016668 196 MGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-----PKLIIAGA--SAYPRDFDY 268 (385)
Q Consensus 196 l~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~-----pklIi~~~--s~~~~~~dl 268 (385)
++....|.+.. +.+...|..+..++ ++ +++ +|+++|++.+++.+ |++|++.. +.++...|+
T Consensus 186 i~s~~~H~s~~--------~~~~~~g~~~~~v~--~d-~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l 253 (475)
T 3k40_A 186 YCSDQAHSSVE--------RAGLLGGVKLRSVQ--SE-NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYL 253 (475)
T ss_dssp EEETTSCHHHH--------HHHHHHTCEEEEEC--CB-TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCH
T ss_pred EECCCchHHHH--------HHHHHcCCceEEEE--CC-CCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCH
Confidence 88876543221 23445676555554 55 357 99999999986532 56565543 345778899
Q ss_pred HHHHHHHHHcCcEEEEeccccccccccCcccCCC---CCCcEEEECCCccCccccE-EEEEEeCC
Q 016668 269 PRMRQIADAVGALLMMDMAHISGLVAASVVADPF---KYCDVVTTTTHKSLRGPRG-GMIFFKKD 329 (385)
Q Consensus 269 ~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~gaDiv~~S~hK~l~Gprg-G~I~~~~~ 329 (385)
++|+++|+++|+++++|++|+.+..........+ +.+|.+++++||+|.+|.| |+++++++
T Consensus 254 ~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~ 318 (475)
T 3k40_A 254 DECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDP 318 (475)
T ss_dssp HHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSG
T ss_pred HHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCH
Confidence 9999999999999999999976644332222222 2579999999999988865 77887765
No 148
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.72 E-value=2.2e-16 Score=155.68 Aligned_cols=162 Identities=22% Similarity=0.250 Sum_probs=119.9
Q ss_pred HHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccC
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDE 233 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~ 233 (385)
++.+++++|.+. .|.+++|++|+..++.+++++||+|++.++.|++... .+ .......|..+..++ .
T Consensus 58 ~~~la~~~~~~~-----~i~~~sGt~a~~~~~~~~~~~g~~vl~~~~~~~~~~~-~~---~~~~~~~g~~~~~~~--~-- 124 (386)
T 1cs1_A 58 QRALAELEGGAG-----AVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYR-LF---DSLAKRGCYRVLFVD--Q-- 124 (386)
T ss_dssp HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH-HH---HHHHTTTSCEEEEEC--T--
T ss_pred HHHHHHHhCCCc-----EEEeCCHHHHHHHHHHHHhCCCCEEEEecCCcHhHHH-HH---HHHHHhcCCEEEEeC--C--
Confidence 456888999873 4677999999999999999999999999987755321 00 001134555444333 2
Q ss_pred CCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEE
Q 016668 234 STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTT 310 (385)
Q Consensus 234 ~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~ 310 (385)
.|++++++.+++ ++++|++..++++ ...|+++|.++|+++|+++++|++|..+.. ..+++ +.|++++
T Consensus 125 ----~d~~~l~~~i~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~-----~~~~~~~~di~~~ 194 (386)
T 1cs1_A 125 ----GDEQALRAALAE-KPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPAL-----QNPLALGADLVLH 194 (386)
T ss_dssp ----TCHHHHHHHHHT-CCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTT-----CCGGGGTCSEEEE
T ss_pred ----CCHHHHHHhhcc-CCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCccccc-----CCccccCceEEEE
Confidence 289999999865 7899998877654 678999999999999999999999965532 12334 7899999
Q ss_pred CCCccCcccc---EEEEEEeCCCCchhHHHHHHhhc
Q 016668 311 TTHKSLRGPR---GGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 311 S~hK~l~Gpr---gG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
|+||++.||. ||+++++++ ++.+++...
T Consensus 195 s~sK~~~~~~~~~~G~~~~~~~-----~l~~~l~~~ 225 (386)
T 1cs1_A 195 SCTKYLNGHSDVVAGVVIAKDP-----DVVTELAWW 225 (386)
T ss_dssp ETTTTTTCSSCCCCEEEEESSH-----HHHHHHHHH
T ss_pred cCcccccCCCCceeEEEEeCcH-----HHHHHHHHH
Confidence 9999987664 489998874 466666543
No 149
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.72 E-value=5.9e-17 Score=158.34 Aligned_cols=191 Identities=15% Similarity=0.141 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHc-CCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEE
Q 016668 148 ELETLCQKRALAAF-NLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (385)
Q Consensus 148 ~le~~~~~~la~lf-g~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (385)
++++ .+++++ +++.+ ..+.+++|+.|+..++.++++|||+|++.++.|.++.. .+...|..+..
T Consensus 67 ~l~~----~la~~~~~~~~~---~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~--------~~~~~g~~~~~ 131 (375)
T 3op7_A 67 AFKK----SVSQLYTGVKPE---QILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD--------IPKSLGAEVDL 131 (375)
T ss_dssp HHHH----HHHTTSSSCCGG---GEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH--------HHHHTTCEEEE
T ss_pred HHHH----HHHHHhccCChh---hEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH--------HHHHcCCEEEE
Confidence 5555 456666 45543 23445566789999999999999999999987655321 23456665555
Q ss_pred EeccccC-CCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccC
Q 016668 227 MPYRLDE-STGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVAD 300 (385)
Q Consensus 227 i~~~~~~-~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~ 300 (385)
++ +++ +++.+|++++++.++. ++|+|++..+++| ...+ +++|.++|+++|+++|+|++|.. +...+ .+.
T Consensus 132 v~--~~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~-~~~~~-~~~ 206 (375)
T 3op7_A 132 WQ--IEEENGWLPDLEKLRQLIRP-TTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRS-FSELD-VPS 206 (375)
T ss_dssp EE--EEGGGTTEECHHHHHHHCCT-TCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCC-CSSSC-CCC
T ss_pred Ee--ccccCCCCCCHHHHHHhhcc-CCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccc-ccccC-CCc
Confidence 55 442 2456899999999965 7999988877664 5677 99999999999999999999853 33221 111
Q ss_pred CCC--CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 301 PFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 301 p~~--gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
..+ +.++++.|++|++ +|.|+|++++++ ++.+.+.........+.+. ...++...+++
T Consensus 207 ~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~------~l~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 268 (375)
T 3op7_A 207 IIEVYDKGIAVNSLSKTYSLPGIRIGWVAANH------QVTDILRDYRDYTMICAGV-FDDLVAQLALA 268 (375)
T ss_dssp HHHHCTTEEEEEESSSSSSCGGGCCEEEECCH------HHHHHHTTTGGGTTSCCCH-HHHHHHHHHHH
T ss_pred hhhhcCCEEEEeEChhhcCCcccceEEEEeCH------HHHHHHHHHHhhhccCCCc-HHHHHHHHHHh
Confidence 112 3458899999998 577889999965 6888776554333333333 33333334554
No 150
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.72 E-value=9.8e-17 Score=156.28 Aligned_cols=221 Identities=14% Similarity=0.092 Sum_probs=144.5
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhcc--CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHH
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNK--YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSP 179 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~--y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~ 179 (385)
-++|-..++ .+++.|++++...+.+. ...+|+.. +. .+++ +++++++|++.+ ..+.+++|++
T Consensus 28 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~----~~---~~lr----~~la~~~g~~~~---~i~~t~g~~~ 93 (360)
T 3hdo_A 28 WIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSA----SS---QKLR----EVAGELYGFDPS---WIIMANGSDE 93 (360)
T ss_dssp SEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCS----SC---HHHH----HHHHHHHTCCGG---GEEEESSHHH
T ss_pred eeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCC----ch---HHHH----HHHHHHhCcCcc---eEEEcCCHHH
Confidence 355554444 35899999998877542 02245432 11 2444 467888898764 2345566677
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcC
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGA 259 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~ 259 (385)
|+..++.++++|||+|++.++.|.++.. .+...|..+..++ +++ ++.+ ++++ +..++|+|++..
T Consensus 94 al~~~~~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~--~~~-~~~~--~~l~---~~~~~~~v~i~~ 157 (360)
T 3hdo_A 94 VLNNLIRAFAAEGEEIGYVHPSYSYYGT--------LAEVQGARVRTFG--LTG-DFRI--AGFP---ERYEGKVFFLTT 157 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHH--------HHHHHTCEEEEEC--BCT-TSSB--TTCC---SSBCSSEEEEES
T ss_pred HHHHHHHHHhCCCCEEEEcCCChHHHHH--------HHHHCCCEEEEee--CCC-CCCH--HHHH---hhcCCCEEEEeC
Confidence 9999999999999999999987655321 2345566544444 542 2334 3333 233678888877
Q ss_pred CCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccC--ccccEEEEEEeCCCCch
Q 016668 260 SAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 260 s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~ 333 (385)
+++ |...|+++|.++|+++|+++++|++|.. +...+.. ...+ +.+++++|+||++ +|.|.|++++++
T Consensus 158 p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~-~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~----- 230 (360)
T 3hdo_A 158 PNAPLGPSFPLEYIDELARRCAGMLVLDETYAE-FAESNAL-ELVRRHENVVVTRTLSKSYSLAGMRIGLAIARP----- 230 (360)
T ss_dssp SCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGG-GSSCCCT-HHHHHCSSEEEEEESTTTTSCTTSCCEEEECCH-----
T ss_pred CCCCCCCCcCHHHHHHHHHHCCCEEEEECChHh-hCCcchh-HHhccCCCEEEEecchHhhcCCccceeeEeeCH-----
Confidence 765 4688999999999999999999999853 3211111 0011 3347899999996 678889999866
Q ss_pred hHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 334 ~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+.....+ .+++....++...+++
T Consensus 231 -~~~~~~~~~~~~---~~~~~~~~~a~~~~l~ 258 (360)
T 3hdo_A 231 -EVIAALDKIRDH---YNLDRLAQAACVAALR 258 (360)
T ss_dssp -HHHHHHHHHSCS---CCSCHHHHHHHHHHHH
T ss_pred -HHHHHHHHhCCC---CCCCHHHHHHHHHHhc
Confidence 677777665433 2456666666666665
No 151
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.71 E-value=9.2e-17 Score=160.57 Aligned_cols=175 Identities=20% Similarity=0.206 Sum_probs=126.5
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccc
Q 016668 133 GLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMT 212 (385)
Q Consensus 133 g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~ 212 (385)
+|...|+ +++...++|+ ++++++|.+. .+.++||++|+.+ +.++++|||+|++.++.|++.....
T Consensus 58 ~~~y~r~--~~p~~~~l~~----~la~l~g~~~-----~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~--- 122 (400)
T 3nmy_A 58 GFEYSRT--HNPTRFAYER----CVAALEGGTR-----AFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLF--- 122 (400)
T ss_dssp SCCBTTT--CCHHHHHHHH----HHHHHHTCSE-----EEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHH---
T ss_pred CcccccC--CCHHHHHHHH----HHHHHhCCCC-----EEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHH---
Confidence 4444444 6776667765 5788999874 4678899999987 5778999999999998776532110
Q ss_pred cccc-cccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccc
Q 016668 213 PKRR-VSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHI 289 (385)
Q Consensus 213 ~~~~-~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~ 289 (385)
... ....|..+..++ . .|++++++.+++ ++++|++..+++| ...|+++|+++|+++|+++++|++|.
T Consensus 123 -~~~~~~~~g~~~~~v~--~------~d~~~l~~~i~~-~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~ 192 (400)
T 3nmy_A 123 -ERVRRRTAGLDFSFVD--L------TDPAAFKAAIRA-DTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFA 192 (400)
T ss_dssp -HHTHHHHHCCEEEEEC--T------TSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred -HHhhHhhcCeEEEEEC--C------CCHHHHHHHhcc-CCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCc
Confidence 001 122355443333 2 289999999965 7899998877664 67899999999999999999999997
Q ss_pred ccccccCcccCCCC-CCcEEEECCCccCccc---cEE-EEEEeCCCCchhHHHHHHhh
Q 016668 290 SGLVAASVVADPFK-YCDVVTTTTHKSLRGP---RGG-MIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 290 ~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gp---rgG-~I~~~~~~~~~~~~~~~i~~ 342 (385)
.+.. ..+++ ++|+++.|+||+|.|| .|| +++.+++ ++.+++..
T Consensus 193 ~~~~-----~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~-----~~~~~l~~ 240 (400)
T 3nmy_A 193 SPML-----QRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNA-----ELAEQMAF 240 (400)
T ss_dssp HHHH-----CCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCH-----HHHHHHHH
T ss_pred cccc-----CChhhcCCcEEEecCccccCCCCCcceeEEEEeCCH-----HHHHHHHH
Confidence 5543 23455 8999999999999876 567 6666654 56666543
No 152
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.71 E-value=3.9e-16 Score=156.75 Aligned_cols=187 Identities=19% Similarity=0.232 Sum_probs=134.9
Q ss_pred CCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh-
Q 016668 110 SENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI- 188 (385)
Q Consensus 110 sen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al- 188 (385)
+.+..++.+++++...+...+ |+.| +...++ ++.+++++|.+. .+.++|||.|+..++.++
T Consensus 37 ~~~~~~~~~~~a~~~~~~~~~--------~~~~-~~~~~l----~~~la~~~g~~~-----~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 37 SGKVIGTKELQLMVEASLDGW--------LTTG-RFNDAF----EKKLGEYLGVPY-----VLTTTSGSSANLLALTALT 98 (437)
T ss_dssp CCCCCCHHHHHHHHHHHHHCC--------CBSC-HHHHHH----HHHHHHHHTCSE-----EEEESCHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHcCC--------cCCC-hHHHHH----HHHHHHHHCCCc-----EEEeCCHHHHHHHHHHHhh
Confidence 455667899999887765321 2223 333444 456888999874 477899999999999998
Q ss_pred --------ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 189 --------LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 189 --------l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
++|||+|+++++.|.++.. .+...|.. ++.++++++++.+|++++++.+++ ++++|++..
T Consensus 99 ~~~~~~~~~~~gd~Vi~~~~~~~~~~~--------~~~~~g~~--~~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~- 166 (437)
T 3bb8_A 99 SPKLGVRALKPGDEVITVAAGFPTTVN--------PTIQNGLI--PVFVDVDIPTYNVNASLIEAAVSD-KTKAIMIAH- 166 (437)
T ss_dssp CGGGGGGSCCTTCEEEECSSSCHHHHH--------HHHHTTCE--EEECCEETTTTEECGGGHHHHCCT-TEEEEEEEC-
T ss_pred hcccccccCCCcCEEEECCCCcHHHHH--------HHHHcCCE--EEEEeccCccCCcCHHHHHHhcCC-CCeEEEEeC-
Confidence 8999999999987755432 23456664 444556654678999999999865 688887753
Q ss_pred CCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCC--ccCccccEEEEEEeCC
Q 016668 261 AYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTH--KSLRGPRGGMIFFKKD 329 (385)
Q Consensus 261 ~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~h--K~l~GprgG~I~~~~~ 329 (385)
..+...|+++|.++|+++|+++++|++|+.|....+. .+. ..|+++.|++ |.++|++||+++++++
T Consensus 167 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~ 235 (437)
T 3bb8_A 167 TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGK---MAGTFGDIGTVSFYPAKHITMGEGGAVFTQSA 235 (437)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECSTTSSSCCSSCEEEEESCH
T ss_pred CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCe---ecccccCEEEEECcCCcCCCCCCeEEEEeCCH
Confidence 2234479999999999999999999999877654221 122 3788777753 4478889999999864
No 153
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.71 E-value=1.9e-16 Score=159.02 Aligned_cols=197 Identities=13% Similarity=0.076 Sum_probs=124.3
Q ss_pred ccccccCCC--CCcHHHHHHHhhHhhccC----CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecC
Q 016668 104 SLELIASEN--FTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPL 175 (385)
Q Consensus 104 ~l~Liasen--~~s~~V~~al~s~l~~~y----~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~ 175 (385)
-|+|-..++ .+++.|++++...+.+.. ..+|+. ..|. .++++.+++++. +| ++.+ +|.++
T Consensus 71 ~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~---~~g~---~~lr~~ia~~~~--~g~~~~~~----~i~~t 138 (449)
T 3qgu_A 71 IISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGYGA---EQGQ---GALREAVASTFY--GHAGRAAD----EIFIS 138 (449)
T ss_dssp CEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCSTT---TTCC---HHHHHHHHHHHH--TTTTCCGG----GEEEE
T ss_pred EEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCCCC---CCCc---HHHHHHHHHHHH--cCCCCCHH----HEEEc
Confidence 355544333 468999999988776421 112322 1233 366665554444 44 3442 45555
Q ss_pred CcH-HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcce----------EEEEeccccCC-CCCCCHHHH
Q 016668 176 SGS-PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDES-TGLVDYDML 243 (385)
Q Consensus 176 sGs-~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~----------~~~i~~~~~~~-~~~iD~d~l 243 (385)
+|+ +++..+ .++++|||+|++.+|.|.++.. .+...|.. +..++ ++++ ....|++++
T Consensus 139 ~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 207 (449)
T 3qgu_A 139 DGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVD--------TSVMMGMTGDHNGTGFDGIEYMV--CNPDNHFFPDLSKA 207 (449)
T ss_dssp SCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHH--------HHHHHTCSCCBCSSSBTTEEEEE--CCGGGTTCCCGGGC
T ss_pred cCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHH--------HHHHcCCcccccccccceeEEEe--cccccCCcCChhHc
Confidence 555 577766 8889999999999987765532 22334443 44444 4433 334554321
Q ss_pred HHHhhhcCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C---CCcEEEECC
Q 016668 244 EKTAILFRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K---YCDVVTTTT 312 (385)
Q Consensus 244 e~~i~~~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~---gaDiv~~S~ 312 (385)
.++|+|+++.++||+ ..+ +++|+++|+++|++||+|++|. ++..++..+.++ + +.++++.|+
T Consensus 208 ------~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 280 (449)
T 3qgu_A 208 ------KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYA-LYISNPDCPKTIYEIPGADEVAIETCSF 280 (449)
T ss_dssp ------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG-GGCCCTTSCSSGGGSTTGGGTEEEEEEC
T ss_pred ------CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchH-hhhcCCCCCCCHhhccCCCCcEEEEecc
Confidence 368999888777763 443 7889999999999999999985 444443222222 1 345889999
Q ss_pred CccC--ccccEEEEEEeCCC
Q 016668 313 HKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 313 hK~l--~GprgG~I~~~~~~ 330 (385)
+|+| +|+|.|+++++++.
T Consensus 281 sK~~g~~G~r~G~~~~~~~~ 300 (449)
T 3qgu_A 281 SKYAGFTGVRLGWTVVPKAL 300 (449)
T ss_dssp SGGGTCTTCCCEEEECCTTC
T ss_pred hhhcCCccceeEEEecCHHH
Confidence 9997 57889999998864
No 154
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.70 E-value=1.4e-16 Score=162.16 Aligned_cols=198 Identities=15% Similarity=0.090 Sum_probs=133.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCC------CcceeecCCcHHHHHHHHHH
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENK------WGVNVQPLSGSPANFEVYTA 187 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~------~~~~V~~~sGs~A~~~a~~a 187 (385)
++..+.+++.+.+ +.+.. .|...+...++|+.+++|+++++|.+.+. .+..+++++||+||+.++.+
T Consensus 86 ~~~~~~~~~~~~~-n~~~~------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~ 158 (486)
T 1js3_A 86 YPAMLADMLCGAI-GCIGF------SWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLA 158 (486)
T ss_dssp HHHHHHHHHHHHH-CCCCS------SGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CcCcc------ccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHH
Confidence 3445666666554 33221 13334566789999999999999998521 01246678888999998877
Q ss_pred hccC---------CC--------E--EeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhh
Q 016668 188 ILKP---------HD--------R--IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAI 248 (385)
Q Consensus 188 ll~p---------GD--------~--Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~ 248 (385)
+.++ || + |+++++.|. +.. +.+...|..+..++ ++ +++.+|+++|++.++
T Consensus 159 ~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~---s~~-----~~~~~~G~~v~~v~--~d-~~~~~d~~~L~~~i~ 227 (486)
T 1js3_A 159 ARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHS---SVE-----RAGLIGGVKLKAIP--SD-GKFAMRASALQEALE 227 (486)
T ss_dssp HHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCH---HHH-----HHHHHHTCEEEEEC--CC-TTSCCCHHHHHHHHH
T ss_pred HHHHHhhhhhccCccchhcccCCCEEEEECCCCcH---HHH-----HHHHhCCCceEEee--cC-CCCCCCHHHHHHHHH
Confidence 6421 43 4 666766443 211 23456677655555 55 468999999999996
Q ss_pred hcC-----CcEEEEcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC---CCCCCcEEEECCCccCcc
Q 016668 249 LFR-----PKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLRG 318 (385)
Q Consensus 249 ~~~-----pklIi~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~---p~~gaDiv~~S~hK~l~G 318 (385)
+.+ |.+|++..++ +|...|+++|+++|+++|+++++|++|+.+......+.. .++++|++++++||++.+
T Consensus 228 ~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~ 307 (486)
T 1js3_A 228 RDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLV 307 (486)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSC
T ss_pred HHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCC
Confidence 532 2366665443 567789999999999999999999999765443221111 123789999999999977
Q ss_pred c-cEEEEEEeCC
Q 016668 319 P-RGGMIFFKKD 329 (385)
Q Consensus 319 p-rgG~I~~~~~ 329 (385)
| ++|+++++++
T Consensus 308 p~~~G~l~~~~~ 319 (486)
T 1js3_A 308 NFDCSAMWVKRR 319 (486)
T ss_dssp CSSCEEEEESCH
T ss_pred CcceEEEEEeCH
Confidence 6 5588998774
No 155
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.70 E-value=1.3e-16 Score=162.48 Aligned_cols=168 Identities=20% Similarity=0.233 Sum_probs=123.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
|++..++ +++++++++|.+. .+.+++|+.|+..++. +++|||+|++.++.|+++.... ...+...|
T Consensus 131 g~~~~~~----l~~~la~~~g~~~-----~i~~~sGt~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~----~~~~~~~G 196 (464)
T 1ibj_A 131 GNPTRDA----LESLLAKLDKADR-----AFCFTSGMAALSAVTH-LIKNGEEIVAGDDVYGGSDRLL----SQVVPRSG 196 (464)
T ss_dssp CCHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHT-TSCTTCEEEEESSCCHHHHHHH----HHTSGGGT
T ss_pred CCHHHHH----HHHHHHHHhCCCe-----EEEECCHHHHHHHHHH-HhCCCCEEEEECCCchhHHHHH----HHHHHHcC
Confidence 5554333 4568899999863 4667899999887775 8899999999998776542100 00123456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+..++ . .|++++++.+++ ++|+|+++.+++| ...|+++|+++|+++|+++++|++|+.|.. .
T Consensus 197 ~~v~~v~--~------~d~~~l~~~i~~-~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~-----~ 262 (464)
T 1ibj_A 197 VVVKRVN--T------TKLDEVAAAIGP-QTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVL-----S 262 (464)
T ss_dssp CEEEEEC--T------TSHHHHHHHCCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTT-----C
T ss_pred CEEEEeC--C------CCHHHHHHHhcc-CceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCccccc-----C
Confidence 5444433 3 289999999864 7899999887764 678999999999999999999999976532 2
Q ss_pred CCCC-CCcEEEECCCccCccc---cEEEEEEeCCCCchhHHHHHHhh
Q 016668 300 DPFK-YCDVVTTTTHKSLRGP---RGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gp---rgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
.+++ ++|++++|+||++.|| ++|+++++++ ++.+++..
T Consensus 263 ~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~-----~l~~~l~~ 304 (464)
T 1ibj_A 263 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----KLAKEVYF 304 (464)
T ss_dssp CGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSH-----HHHHHHHH
T ss_pred ChhhcCCEEEEECCcccccCCCCCcEEEEEEChH-----HHHHHHHH
Confidence 3444 7899999999999765 5699999864 56666654
No 156
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.70 E-value=2.2e-16 Score=158.30 Aligned_cols=190 Identities=19% Similarity=0.146 Sum_probs=129.5
Q ss_pred cccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHH
Q 016668 107 LIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT 186 (385)
Q Consensus 107 Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~ 186 (385)
+..+.++..+.+.++... +.+. ..|+...|+ +++..++++ +++++++|.+. .+.++||+.|+..++.
T Consensus 25 i~~~~~~~~~~~~~~~~~-~~~~-~~~~~y~~~--~~~~~~~l~----~~la~~~g~~~-----~v~~~sGt~A~~~~l~ 91 (421)
T 2ctz_A 25 IYPTTSYVFKSPEHAANL-FALK-EFGNIYSRI--MNPTVDVLE----KRLAALEGGKA-----ALATASGHAAQFLALT 91 (421)
T ss_dssp BCCCSCBCCSCHHHHHHH-HTTT-TGGGSCBTT--BCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHH
T ss_pred eeccceeeeCCHHHHHHh-hccc-cCCCcccCC--CChHHHHHH----HHHHHHhCCCc-----eEEecCHHHHHHHHHH
Confidence 334555555554444321 1111 124444443 445455555 46888999874 4678899999999999
Q ss_pred HhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEec-cccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--C
Q 016668 187 AILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPY-RLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--P 263 (385)
Q Consensus 187 all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~-~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~ 263 (385)
+++++||+|++.++.|+++..... ......|..+ ..+ +.+ |++++++.+++ ++|+|++..+++ +
T Consensus 92 ~~~~~gd~vi~~~~~~~~~~~~~~----~~~~~~g~~~--~~~~~~~------d~~~l~~~i~~-~~~~v~~~~~~n~~G 158 (421)
T 2ctz_A 92 TLAQAGDNIVSTPNLYGGTFNQFK----VTLKRLGIEV--RFTSREE------RPEEFLALTDE-KTRAWWVESIGNPAL 158 (421)
T ss_dssp HHCCTTCEEEECSCCCHHHHHHHH----THHHHTTCEE--EECCTTC------CHHHHHHHCCT-TEEEEEEESSCTTTC
T ss_pred HHhCCCCEEEEeCCCchHHHHHHH----HHHHHcCCEE--EEECCCC------CHHHHHHhhcc-CCeEEEEECCCCCCC
Confidence 999999999999987765432100 0023456543 443 332 89999999965 789998877665 4
Q ss_pred CCCCHHHHHHHHHHcCcEEEEeccc-cccccccCcccCCCC-CCcEEEECCCccCcccc---EEEEEEe
Q 016668 264 RDFDYPRMRQIADAVGALLMMDMAH-ISGLVAASVVADPFK-YCDVVTTTTHKSLRGPR---GGMIFFK 327 (385)
Q Consensus 264 ~~~dl~~I~~ia~~~ga~livD~ah-~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~ 327 (385)
...|+++|+++|+++|+++++|++| +.|.. ..++. ++|++++|+||+|.||. ||+++.+
T Consensus 159 ~~~~l~~i~~~a~~~g~~livD~~~~~~g~~-----~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~ 222 (421)
T 2ctz_A 159 NIPDLEALAQAAREKGVALIVDNTFGMGGYL-----LRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDG 222 (421)
T ss_dssp CCCCHHHHHHHHHHHTCEEEEECGGGGGGTS-----CCGGGGTCSEEEEETTTTTTCSSCCCCEEEEEC
T ss_pred cccCHHHHHHHHHHcCCEEEEECCccccccc-----CCccccCCeEEEECCcccccCCCCcEEEEEEec
Confidence 6789999999999999999999999 76632 13344 78999999999997754 4555553
No 157
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.70 E-value=1.1e-16 Score=155.27 Aligned_cols=207 Identities=14% Similarity=0.097 Sum_probs=133.3
Q ss_pred hccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHH
Q 016668 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANF 182 (385)
Q Consensus 103 ~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~ 182 (385)
++--|..+.++..+.+++++... +. +..+...|+..+...+++ +++++++|.+. .+.+++|+.|+.
T Consensus 11 ~~~~l~~~~~p~~~~~~~~~~~~----~~-~~~~~~~y~~~~~~~~l~----~~la~~~~~~~-----~i~~~~G~~a~~ 76 (357)
T 3lws_A 11 QTTGQISGHGKRNVGVLKTAFAA----VA-DEMASDQYGTGAIIEPFE----QKFADVLGMDD-----AVFFPSGTMAQQ 76 (357)
T ss_dssp TCSEESSBSSCCBHHHHHHHHTT----SC-TTCBCEETTEETTHHHHH----HHHHHHHTCSE-----EEEESCHHHHHH
T ss_pred hhcccccCCCCCCHHHHHHHHHH----hh-cccCcccccCChHHHHHH----HHHHHHhCCCc-----EEEecCcHHHHH
Confidence 33345567777777777665432 11 111122343334444555 46888999865 466789999999
Q ss_pred HHHHHhccCCC--EEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 183 EVYTAILKPHD--RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 183 ~a~~all~pGD--~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
.++.++++||| .|++.++.|....... ......|. +.++++. +++.+|++++++.. ++|+|+++.+
T Consensus 77 ~al~~~~~~gd~~~vi~~~~~~~~~~~~~-----~~~~~~g~--~~~~v~~--~~~~~d~~~l~~~~---~~~~v~~~~p 144 (357)
T 3lws_A 77 VALRIWSDETDNRTVAYHPLCHLEIHEQD-----GLKELHPI--ETILVGA--ADRLMTLDEIKALP---DIACLLLELP 144 (357)
T ss_dssp HHHHHHHHHHTCCEEEECTTCHHHHSSTT-----HHHHHSSC--EEEECSC--TTSCCCHHHHHTCC---SCSEEEEESS
T ss_pred HHHHHHhhcCCCcEEEecccceeeeeccc-----hhhhccCc--EEEEecC--CCCCcCHHHHhcCc---CcceEEEEcc
Confidence 99999999999 6666554332211100 01223454 3444332 45689999999873 3899988877
Q ss_pred CC---CCCC---CHHHHHHHHHHcCcEEEEecccccccc-ccCcccCCC-CCCcEEEECCCccCccccEEEEEEeCCCCc
Q 016668 261 AY---PRDF---DYPRMRQIADAVGALLMMDMAHISGLV-AASVVADPF-KYCDVVTTTTHKSLRGPRGGMIFFKKDPVL 332 (385)
Q Consensus 261 ~~---~~~~---dl~~I~~ia~~~ga~livD~ah~~Gli-~~g~~~~p~-~gaDiv~~S~hK~l~GprgG~I~~~~~~~~ 332 (385)
++ +... ++++|.++|+++|++|++|++|..+.. ..+.....+ .++|+++.|+||+|.||.||++++++
T Consensus 145 ~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~gg~~~~~~---- 220 (357)
T 3lws_A 145 QREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAGAILAGPA---- 220 (357)
T ss_dssp BGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSCEEEEECH----
T ss_pred cccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCceEEEEcCH----
Confidence 65 4444 489999999999999999999863221 112111111 25788899999999899999988877
Q ss_pred hhHHHHHHh
Q 016668 333 GVELESAIN 341 (385)
Q Consensus 333 ~~~~~~~i~ 341 (385)
++.+++.
T Consensus 221 --~~~~~~~ 227 (357)
T 3lws_A 221 --AFCQTAR 227 (357)
T ss_dssp --HHHHHHH
T ss_pred --HHHHHHH
Confidence 5666664
No 158
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.70 E-value=1.7e-15 Score=155.32 Aligned_cols=225 Identities=12% Similarity=0.016 Sum_probs=144.0
Q ss_pred CcHHHHHHHhhHhhcc---CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-
Q 016668 114 TSRAVMEAVGSCLTNK---YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~---y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all- 189 (385)
.++.++++....+.+. ...+|+. ..|.+ ++++.+++++.+.+|.+.+ ....+++++|+.|+..++.+++
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~~~al~~~~~~l~~ 179 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSH---SQGIH---GLRDAIASGIASRDGFPAN-ADDIFLTDGASPGVHLMMQLLIR 179 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCC---TTCCH---HHHHHHHHHHHHHHSSCCC-GGGEEEESSSHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCC---CcChH---HHHHHHHHHHHhhcCCCCC-cccEEEcCCHHHHHHHHHHHHcC
Confidence 4556666665555442 1223433 23444 6777778888888885421 1123555566779999999998
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhc-----CCcEEEEcCCCCC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF-----RPKLIIAGASAYP 263 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~-----~pklIi~~~s~~~ 263 (385)
+|||+|++.+|.|.++.. .+...|..+. +++++++ ++.+|+++|++.+++. ++|+|++..++||
T Consensus 180 ~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~--~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NP 249 (500)
T 3tcm_A 180 NEKDGILVPIPQYPLYSA--------SIALHGGALV--PYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNP 249 (500)
T ss_dssp STTEEEEEEESCCTHHHH--------HHHHTTCEEE--EEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTT
T ss_pred CCCCEEEEeCCCcHhHHH--------HHHHcCCEEE--EEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCC
Confidence 899999999987765432 3445676444 4445544 4589999999998753 6788887777776
Q ss_pred C--CCC---HHHHHHHHHHcCcEEEEeccccccccccC-cccCC-------C---C-CCc-EEEECCCccC---ccccEE
Q 016668 264 R--DFD---YPRMRQIADAVGALLMMDMAHISGLVAAS-VVADP-------F---K-YCD-VVTTTTHKSL---RGPRGG 322 (385)
Q Consensus 264 ~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g-~~~~p-------~---~-gaD-iv~~S~hK~l---~GprgG 322 (385)
+ ..+ +++|+++|+++|+++++|++|.. +++.+ ....+ + . ..+ +++.|+||+| +|.|+|
T Consensus 250 tG~~~s~~~l~~i~~la~~~~~~li~Deay~~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G 328 (500)
T 3tcm_A 250 TGQVLAEENQYDIVKFCKNEGLVLLADEVYQE-NIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGG 328 (500)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT-CBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCE
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEecCccc-cccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceE
Confidence 3 443 67788889999999999999854 33322 11111 1 1 222 5678999998 588999
Q ss_pred EEEE---eCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHH
Q 016668 323 MIFF---KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCL 364 (385)
Q Consensus 323 ~I~~---~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al 364 (385)
++++ ++ ++.+.+..... ...+++....++++.++
T Consensus 329 ~~~~~~~~~------~~~~~l~~~~~--~~~~~~~~~q~~~~~~l 365 (500)
T 3tcm_A 329 YFEITGFSA------PVREQIYKIAS--VNLCSNITGQILASLVM 365 (500)
T ss_dssp EEEEESCCT------THHHHHHHHHH--TTCCCCHHHHHHHHHHH
T ss_pred EEEEeCCCH------HHHHHHHHHHh--cccCCCHHHHHHHHHHh
Confidence 9988 44 46665544321 12334555555555554
No 159
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.69 E-value=1.6e-16 Score=158.12 Aligned_cols=161 Identities=16% Similarity=0.169 Sum_probs=118.1
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD 232 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (385)
+++++++++|.+. .+.++||++|+..++. +++|||+|++.++.|++.... + . ..+...|..+..++ ++
T Consensus 60 lr~~la~~~g~~~-----~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~-~-~--~~~~~~G~~v~~v~--~~ 127 (393)
T 1n8p_A 60 LERAVAALENAQY-----GLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRY-F-T--KVANAHGVETSFTN--DL 127 (393)
T ss_dssp HHHHHHHHTTCSE-----EEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHH-H-H--HTSTTTCSCCEEES--SH
T ss_pred HHHHHHHHhCCCc-----EEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHH-H-H--HHHHHcCcEEEEeC--CC
Confidence 3457889999873 5778899999999999 999999999999877543210 0 0 01234565444443 32
Q ss_pred CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHc----CcEEEEeccccccccccCcccCCCC-CC
Q 016668 233 ESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAV----GALLMMDMAHISGLVAASVVADPFK-YC 305 (385)
Q Consensus 233 ~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~----ga~livD~ah~~Gli~~g~~~~p~~-ga 305 (385)
| +++++.+++ ++|+|++..++++ ...|+++|.++|+++ |+++++|++|..+.. ..+++ ++
T Consensus 128 ------d-~~l~~~i~~-~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~-----~~~~~~~~ 194 (393)
T 1n8p_A 128 ------L-NDLPQLIKE-NTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYI-----SNPLNFGA 194 (393)
T ss_dssp ------H-HHHHHHSCS-SEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHH-----CCGGGGTC
T ss_pred ------h-HHHHHhccc-CceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCcccccc-----CCHHHcCC
Confidence 7 889998864 6899998877654 678999999999999 999999999976543 13344 78
Q ss_pred cEEEECCCccCccc--c-EEEEEEeCCCCchhHHHHHHhhc
Q 016668 306 DVVTTTTHKSLRGP--R-GGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 306 Div~~S~hK~l~Gp--r-gG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
|++++|+||++.++ + ||+++++++ ++.+.+...
T Consensus 195 di~~~S~sK~~g~~G~rigG~~~~~~~-----~~~~~l~~~ 230 (393)
T 1n8p_A 195 DIVVHSATKYINGHSDVVLGVLATNNK-----PLYERLQFL 230 (393)
T ss_dssp SEEEEETTTTTTCSSCCCCEEEEESCH-----HHHHHHHHH
T ss_pred eEEEEECcccccCCCCceeEEEEeCCH-----HHHHHHHHH
Confidence 99999999988543 2 399888643 566666543
No 160
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.69 E-value=2e-16 Score=158.02 Aligned_cols=225 Identities=13% Similarity=0.133 Sum_probs=134.0
Q ss_pred hhhcccCCh-HHHHHHHHHHHHh---hh---ccccccCC--CCCcHHHHHHHhhHhhccCC-CCCCCCCCCCCcHHHHHH
Q 016668 80 DYSLGEADP-EVCEIITKEKERQ---FK---SLELIASE--NFTSRAVMEAVGSCLTNKYS-EGLPGKRYYGGNEYIDEL 149 (385)
Q Consensus 80 ~~~l~~~dp-~~~~~i~~e~~~~---~~---~l~Liase--n~~s~~V~~al~s~l~~~y~-~g~p~~r~~~G~~~~~~l 149 (385)
+.+++.+++ +.|..+.+..... .. -|+|-..+ ..+++.|++++...+.+... .++.+ |+......++
T Consensus 27 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~---y~~~~g~~~l 103 (432)
T 3ei9_A 27 NSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSG---YGAEQGAKPL 103 (432)
T ss_dssp CHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCC---CCCTTCCHHH
T ss_pred ChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccC---CCCCCCCHHH
Confidence 455666666 4555443322221 12 24444333 34689999999877653211 11111 1111112367
Q ss_pred HHHHHHHHHHHcCCCCCCCcceeecCCcHH-HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc-------
Q 016668 150 ETLCQKRALAAFNLDENKWGVNVQPLSGSP-ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------- 221 (385)
Q Consensus 150 e~~~~~~la~lfg~~~~~~~~~V~~~sGs~-A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------- 221 (385)
++.+++++.+.++++.+ +|.+++|+. ++. ++.++++|||+|++.+|.|.++.. .+...|
T Consensus 104 ~~~ia~~~~~~~~~~~~----~i~~t~G~~~al~-~l~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~ 170 (432)
T 3ei9_A 104 RAAIAKTFYGGLGIGDD----DVFVSDGAKCDIS-RLQVMFGSNVTIAVQDPSYPAYVD--------SSVIMGQTGQFNT 170 (432)
T ss_dssp HHHHHHHHHTTTTCCGG----GEEEESCHHHHHH-HHHHHHCTTCCEEEEESCCTHHHH--------HHHHHTCSCCEET
T ss_pred HHHHHHHHHccCCCCcc----eEEECCChHHHHH-HHHHHcCCCCEEEEeCCCCHHHHH--------HHHHcCCcccccc
Confidence 77666666554576653 455666665 555 468889999999999998766532 111122
Q ss_pred -----ceEEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccc
Q 016668 222 -----IYFESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 222 -----~~~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~ 290 (385)
..+..++ ++.+ ....|+++ ..++|+|+++.++|| ..++ +++|+++|+++|++||+|++|.
T Consensus 171 ~~~~~~~~~~~~--~~~~~~~~~~l~~------~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~- 241 (432)
T 3ei9_A 171 DVQKYGNIEYMR--CTPENGFFPDLST------VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYA- 241 (432)
T ss_dssp TTTEETTCEEEE--CCGGGTTSCCGGG------CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTG-
T ss_pred cccccCceEEec--cCcccCCcCChhh------CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchH-
Confidence 1233334 4322 23455432 236899888877776 3444 6778888999999999999985
Q ss_pred cccccCcccCC--CC---CCcEEEECCCccC--ccccEEEEEEeCC
Q 016668 291 GLVAASVVADP--FK---YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 291 Gli~~g~~~~p--~~---gaDiv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
+++.++..... +. +.++++.|+||+| +|.|.|+++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~ 287 (432)
T 3ei9_A 242 MYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKK 287 (432)
T ss_dssp GGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTT
T ss_pred hhccCCCCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChH
Confidence 34333322111 11 2358899999997 7788899999886
No 161
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.69 E-value=4.4e-16 Score=152.04 Aligned_cols=184 Identities=14% Similarity=0.074 Sum_probs=122.6
Q ss_pred HHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHhccCC-CEEeecCCCCCccccCCccccccccccCcceEEEEeccc
Q 016668 154 QKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL 231 (385)
Q Consensus 154 ~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~ 231 (385)
++.+++++|++.+ +|.+++| ++|+..++.++++|| |+|++.+|.|.++.. .+...|..+. .+++
T Consensus 64 r~~la~~~~~~~~----~v~~~~G~~~ai~~~~~~~~~~g~d~Vl~~~p~~~~~~~--------~~~~~g~~~~--~v~~ 129 (356)
T 1fg7_A 64 IENYAQYAGVKPE----QVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSV--------SAETIGVECR--TVPT 129 (356)
T ss_dssp HHHHHHHHTSCGG----GEEEESHHHHHHHHHHHHHCCTTTCEEEECSSSCTHHHH--------HHHHHTCEEE--ECCC
T ss_pred HHHHHHHhCCChH----HEEEcCCHHHHHHHHHHHHhCCCCCEEEEeCCChHHHHH--------HHHHcCCEEE--EeeC
Confidence 3467788898763 4555565 569999999999999 999999987765421 2334565444 4445
Q ss_pred cCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHH---HHHHHcCcEEEEeccccccccccCcccCCCC--C
Q 016668 232 DESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMR---QIADAVGALLMMDMAHISGLVAASVVADPFK--Y 304 (385)
Q Consensus 232 ~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~---~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--g 304 (385)
+ +++.+|++++++.++ ++|+|+++.++|| ...+.+++. ++|+ +|+++++|++|.. +.........++ +
T Consensus 130 ~-~~~~~d~~~l~~~i~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~-~~~~~~~~~~~~~~~ 204 (356)
T 1fg7_A 130 L-DNWQLDLQGISDKLD--GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIE-FCPQASLAGWLAEYP 204 (356)
T ss_dssp C-TTSCCCHHHHHTSCT--TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGG-GSGGGCSGGGTTTCT
T ss_pred C-CCCCCCHHHHHHHhc--CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchh-hcCCCcHHHHHhhCC
Confidence 4 346799999999885 7899988877765 466655554 5555 8999999999853 221111111112 3
Q ss_pred CcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 305 CDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 305 aDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
.++++.|+||++ +|+|.|++++++ ++.+.+.....+. +++....++...+|+
T Consensus 205 ~~i~~~s~sK~~g~~G~r~G~~~~~~------~~~~~l~~~~~~~---~~~~~~~~a~~~~l~ 258 (356)
T 1fg7_A 205 HLAILRTLSKAFALAGLRCGFTLANE------EVINLLMKVIAPY---PLSTPVADIAAQALS 258 (356)
T ss_dssp TEEEEEESSSTTCCGGGCCEEEEECH------HHHHHHHHHSCSS---CSCHHHHHHHHHHTS
T ss_pred CEEEEecchHhhcCchhhhEEEEeCH------HHHHHHHHhcCCC---CCCHHHHHHHHHHhc
Confidence 468899999997 678889999976 6777776543332 234444444444443
No 162
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.69 E-value=1.1e-15 Score=152.97 Aligned_cols=184 Identities=13% Similarity=0.022 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCC--------------EEeec-CCCCCccccCCccc
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD--------------RIMGL-DLPHGGHLSHGFMT 212 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD--------------~Vl~~-~~~~ggh~s~~~~~ 212 (385)
++++.+++++.+.+|.... ..-.+++++|++|+..++.++++||| +|+++ +|.|.+|.....
T Consensus 87 ~lr~~ia~~l~~~~g~~~~-~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~-- 163 (444)
T 3if2_A 87 AFIDALVGFFNRHYDWNLT-SENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHV-- 163 (444)
T ss_dssp HHHHHHHHHHHHHHCCCCC-GGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCS--
T ss_pred HHHHHHHHHHHhhcCCCCC-HHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccc--
Confidence 7787777788777775421 11234445566799999999999998 78776 777766533110
Q ss_pred cccccccCcceEEEEeccccCCC----CCCCHHHHHHHhh--hcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcE
Q 016668 213 PKRRVSGTSIYFESMPYRLDEST----GLVDYDMLEKTAI--LFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGAL 281 (385)
Q Consensus 213 ~~~~~~~~g~~~~~i~~~~~~~~----~~iD~d~le~~i~--~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~ 281 (385)
........|. .++++++++++ +.+|+++|++.++ ..++++|++..++|| ...+ +++|.++|+++|++
T Consensus 164 ~~~~~~~~~~--~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~ 241 (444)
T 3if2_A 164 EGQHFAAVLP--HIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIP 241 (444)
T ss_dssp SSCCEEECCC--EEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCC
T ss_pred ccchhhccCc--eEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCE
Confidence 0001122343 44444455322 3689999998732 236788888766665 5667 88899999999999
Q ss_pred EEEecccccccc---ccCcccCCCCCCcEEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 282 LMMDMAHISGLV---AASVVADPFKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 282 livD~ah~~Gli---~~g~~~~p~~gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
||+|++|..++. ..+..+ ...+.+++++|+||++ +|.|.|+++.++ ++.+.+...
T Consensus 242 li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~l~~~~~~~ 300 (444)
T 3if2_A 242 LIIDNAYGMPFPNIIYSDAHL-NWDNNTILCFSLSKIGLPGMRTGIIVADA------KVIEAVSAM 300 (444)
T ss_dssp EEEECTTCTTTTCCBCSCCCC-CCCTTEEEEEESTTTTCGGGCCEEEECCH------HHHHHHHHH
T ss_pred EEEECCCCCcccccccccccc-cCCCCEEEEechhhccCCCCceEEEEECH------HHHHHHHHH
Confidence 999999854221 111111 1125568899999974 567889998876 566666543
No 163
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.68 E-value=4.1e-16 Score=159.48 Aligned_cols=198 Identities=14% Similarity=0.071 Sum_probs=134.1
Q ss_pred CCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh---
Q 016668 112 NFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--- 188 (385)
Q Consensus 112 n~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--- 188 (385)
...++.+++++.....+... ..+...+...++|+.+++++++++|++..+ ..+++++||+||..++.++
T Consensus 110 ~~~~~~v~~~~~~~~~n~~~------~~~~~~~~~~~le~~~~~~la~~~g~~~~~--~~~~t~ggt~a~~~al~~ar~~ 181 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQSM------DSWDQASSATYVEQKVVNWLCDKYDLSEKA--DGIFTSGGTQSNQMGLMLARDW 181 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCCT------TCGGGCHHHHHHHHHHHHHHHHHTTCCTTC--EEEEESSHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhcccc------cchhhChHHHHHHHHHHHHHHHHhCCCCCC--CeEEcCCchHHHHHHHHHHHHH
Confidence 45688888887665544311 113334567789999999999999996422 2456677888999888873
Q ss_pred -c---------cC------CC-EEeecCCCCCccccCCccccccccccCcc---eEEEEeccccCCCCCCCHHHHHHHhh
Q 016668 189 -L---------KP------HD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSI---YFESMPYRLDESTGLVDYDMLEKTAI 248 (385)
Q Consensus 189 -l---------~p------GD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~---~~~~i~~~~~~~~~~iD~d~le~~i~ 248 (385)
+ ++ || +|++.++.|.+.. +.+...|. .+..++ ++ +++.+|+++|++.++
T Consensus 182 ~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~--------~~~~~~g~g~~~v~~v~--~~-~~~~~d~~~L~~~i~ 250 (497)
T 2qma_A 182 IADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQ--------KSASWMGLGEKAVMTVD--AN-ADGTMDITKLDEVIA 250 (497)
T ss_dssp HHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHH--------HHHHHTTSCGGGEEEEC--BC-TTSSBCGGGHHHHHH
T ss_pred HHHhhcccchhhcccccccCCeEEEECCCchHHHH--------HHHHHcCCCcccEEEEe--cC-CCCcCCHHHHHHHHH
Confidence 3 13 46 7887766543321 12334443 445555 54 467899999999986
Q ss_pred hc---C--CcEEEEcCCC--CCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccC---CCCCCcEEEECCCccCcc
Q 016668 249 LF---R--PKLIIAGASA--YPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVAD---PFKYCDVVTTTTHKSLRG 318 (385)
Q Consensus 249 ~~---~--pklIi~~~s~--~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~---p~~gaDiv~~S~hK~l~G 318 (385)
+. . |.+|++..++ +|...|+++|+++|+++|+++++|++|+.+..... +.. .++++|++++|+||++.+
T Consensus 251 ~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~ 329 (497)
T 2qma_A 251 QAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQ 329 (497)
T ss_dssp HHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCC
T ss_pred HHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCC
Confidence 53 2 3366654333 46788999999999999999999999976544222 111 123679999999999988
Q ss_pred cc-EEEEEEeCC
Q 016668 319 PR-GGMIFFKKD 329 (385)
Q Consensus 319 pr-gG~I~~~~~ 329 (385)
|. .|+++++++
T Consensus 330 p~~~G~l~~~~~ 341 (497)
T 2qma_A 330 TISCGALLVNDK 341 (497)
T ss_dssp CSSCEEEEESCG
T ss_pred CcceEEEEEeCH
Confidence 75 488888765
No 164
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.51 E-value=2.4e-18 Score=169.88 Aligned_cols=224 Identities=13% Similarity=0.097 Sum_probs=145.1
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCC-cHHHHHHHHHHhc
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLS-GSPANFEVYTAIL 189 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~s-Gs~A~~~a~~all 189 (385)
.+++.+.+++...+.+ ...+|+. + ..++++.+++++.+.+| ++.+ +|.+++ |++|+..++.+++
T Consensus 44 ~~~~~v~~a~~~~~~~-~~~~y~~-----~---~~~l~~~la~~l~~~~g~~~~~~----~v~~~~g~~~a~~~~~~~~~ 110 (392)
T 3b1d_A 44 EVMPEVKQAIHDYAEQ-LVYGYTY-----A---SDELLQAVLDWEKSEHQYSFDKE----DIVFVEGVVPAISIAIQAFT 110 (392)
Confidence 4578899988776643 1223332 1 34677777788888888 4442 344444 5679999999999
Q ss_pred cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCC--CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CC
Q 016668 190 KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES--TGLVDYDMLEKTAILFRPKLIIAGASAYP--RD 265 (385)
Q Consensus 190 ~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~--~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~ 265 (385)
+|||+|++.+|.|.++.. .+...|..+. .++.+++ ++.+|++++++.++..++++|++..+++| ..
T Consensus 111 ~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~--~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 180 (392)
T 3b1d_A 111 KEGEAVLINSPVYPPFAR--------SVRLNNRKLV--SNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRV 180 (392)
Confidence 999999999887655421 2334455433 3334322 24589999999886447888888766665 23
Q ss_pred C---CHHHHHHHHHHcCcEEEEeccccccccccCcccCCC-C------CCcEEEECCCccC--ccccEEEEEEeCCCCch
Q 016668 266 F---DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF-K------YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLG 333 (385)
Q Consensus 266 ~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~-~------gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~ 333 (385)
. ++++|+++|+++|++||+|++|. ++...+..+.++ . +.++++.|++|+| +|+|.|+++++++
T Consensus 181 ~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~---- 255 (392)
T 3b1d_A 181 WEREVLEQIGHLCQKHHVILVSDEIHQ-DLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP---- 255 (392)
Confidence 3 58999999999999999999984 444333211112 1 2237899999997 6778899998764
Q ss_pred hHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 334 VELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 334 ~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+.....+...++++....++...+|+
T Consensus 256 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 286 (392)
T 3b1d_A 256 -TLCAQFKHQQLVNNHHEVSSLGYIATETAYR 286 (392)
Confidence 4666665544333223344444444444554
No 165
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.68 E-value=7.9e-16 Score=150.04 Aligned_cols=222 Identities=14% Similarity=0.075 Sum_probs=138.7
Q ss_pred ccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHH
Q 016668 104 SLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPAN 181 (385)
Q Consensus 104 ~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~ 181 (385)
-+++...++. +++.+.+++...+.. ..+|+. .|. .+++ +.+++++|++.+ ..+.+++|++|+
T Consensus 26 ~idl~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~----~~~---~~l~----~~la~~~~~~~~---~v~~~~g~~~al 89 (364)
T 1lc5_A 26 LLDFSANINPLGMPVSVKRALIDNLDC--IERYPD----ADY---FHLH----QALARHHQVPAS---WILAGNGETESI 89 (364)
T ss_dssp SEECSSCCCTTCCCHHHHHHHHHTGGG--GGSCCC----TTC---HHHH----HHHHHHHTSCGG---GEEEESSHHHHH
T ss_pred eEEeccccCCCCCCHHHHHHHHHHHHH--hhcCCC----CCH---HHHH----HHHHHHHCcCHH---HEEECCCHHHHH
Confidence 3556555443 689999998877643 223433 122 2444 457788898753 134444556799
Q ss_pred HHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCC-HHHHHHHhhhcCCcEEEEcCC
Q 016668 182 FEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVD-YDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 182 ~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD-~d~le~~i~~~~pklIi~~~s 260 (385)
..++.++ +||+|++.+|.|.++.. .+...|..+..++ ++++++ ++ ++++.+.+. .++|+|++..+
T Consensus 90 ~~~~~~~--~gd~vl~~~p~y~~~~~--------~~~~~g~~~~~v~--~~~~~~-~~~l~~~~~~~~-~~~~~v~i~~p 155 (364)
T 1lc5_A 90 FTVASGL--KPRRAMIVTPGFAEYGR--------ALAQSGCEIRRWS--LREADG-WQLTDAILEALT-PDLDCLFLCTP 155 (364)
T ss_dssp HHHHHHH--CCSEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCGGGT-TCCCTTHHHHCC-TTCCEEEEESS
T ss_pred HHHHHHc--CCCeEEEeCCCcHHHHH--------HHHHcCCeEEEEe--CCcccc-cchhHHHHHhcc-CCCCEEEEeCC
Confidence 9888888 78999999887654321 2345566555444 432112 33 455555553 36888887766
Q ss_pred CCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcc-cCCCC--CCcEEEECCCccC--ccccEEEEE-EeCC
Q 016668 261 AYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV-ADPFK--YCDVVTTTTHKSL--RGPRGGMIF-FKKD 329 (385)
Q Consensus 261 ~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~~p~~--gaDiv~~S~hK~l--~GprgG~I~-~~~~ 329 (385)
++| ...+ +++|.++|+++|+++++|++|.. +...+.. ...++ +.|+++.|+||++ +|.|.|+++ .++
T Consensus 156 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~- 233 (364)
T 1lc5_A 156 NNPTGLLPERPLLQAIADRCKSLNINLILDEAFID-FIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD- 233 (364)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG-GSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH-
T ss_pred CCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChh-hccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCH-
Confidence 665 5566 89999999999999999999853 3322211 11112 4578999999998 567889998 666
Q ss_pred CCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 330 PVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 330 ~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
++.+.+.....+. +++....++...+++
T Consensus 234 -----~~~~~l~~~~~~~---~~~~~~~~~~~~~l~ 261 (364)
T 1lc5_A 234 -----AAMARMRRQQMPW---SVNALAALAGEVALQ 261 (364)
T ss_dssp -----HHHHHHHHHSCTT---CSCHHHHHHHHHGGG
T ss_pred -----HHHHHHHHhCCCC---CCCHHHHHHHHHHHh
Confidence 6777776544322 344444544444443
No 166
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.67 E-value=2e-15 Score=150.60 Aligned_cols=160 Identities=19% Similarity=0.229 Sum_probs=114.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS 221 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g 221 (385)
+++..++++ +++++++|.+. .+.+.||++|+..++.++++|||+|+++++.|++.... + ...+...|
T Consensus 54 ~~~~~~~l~----~~la~~~g~~~-----~~~~~~gt~a~~~al~~l~~~gd~vi~~~~~~~~~~~~-~---~~~~~~~g 120 (412)
T 2cb1_A 54 KDPTAKALE----ERLKALEGALE-----AVVLASGQAATFAALLALLRPGDEVVAAKGLFGQTIGL-F---GQVLSLMG 120 (412)
T ss_dssp CCHHHHHHH----HHHHHHHTCSE-----EEEESSHHHHHHHHHHTTCCTTCEEEEETTCCHHHHHH-H---HHTTTTTT
T ss_pred CChHHHHHH----HHHHHHhCCCc-----EEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHH-H---HHHHHHcC
Confidence 345444444 57889999874 46678899999999999999999999999877543210 0 00123456
Q ss_pred ceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCccc
Q 016668 222 IYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA 299 (385)
Q Consensus 222 ~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~ 299 (385)
..+..++ +|++++++.+++ ++++|+++.+++ +...|+++|+++|+++|+++++|++|..+-. ..
T Consensus 121 ~~~~~~~---------~~~~~l~~~i~~-~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~----~~ 186 (412)
T 2cb1_A 121 VTVRYVD---------PEPEAVREALSA-KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGA----LC 186 (412)
T ss_dssp CEEEEEC---------SSHHHHHHHCCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTT----SC
T ss_pred CEEEEEC---------CCHHHHHHHhcc-CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccc----cC
Confidence 5443332 248999999865 789998877665 4678999999999999999999999965511 12
Q ss_pred CCCC-CCcEEEECCCccCcccc---EEEEEEeC
Q 016668 300 DPFK-YCDVVTTTTHKSLRGPR---GGMIFFKK 328 (385)
Q Consensus 300 ~p~~-gaDiv~~S~hK~l~Gpr---gG~I~~~~ 328 (385)
.+++ ++|++++|+||++.||. ||+++.++
T Consensus 187 ~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~ 219 (412)
T 2cb1_A 187 RPLAWGAHVVVESLTKWASGHGSVLGGAVLSRE 219 (412)
T ss_dssp CGGGGTCSEEEEETTTTTTCSSCCCCEEEEECC
T ss_pred CccccCCeEEEECCcccccCCCCcEEEEEEecc
Confidence 3344 78999999999997763 34444443
No 167
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.67 E-value=3.8e-16 Score=154.84 Aligned_cols=228 Identities=15% Similarity=0.160 Sum_probs=137.0
Q ss_pred CCcHHHHHHHhh-HhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceee--cCCcHHHHHHH--H
Q 016668 113 FTSRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQ--PLSGSPANFEV--Y 185 (385)
Q Consensus 113 ~~s~~V~~al~s-~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~--~~sGs~A~~~a--~ 185 (385)
++++.|.+++.. .+......+|.. ..|.+ ++++.+.+++...+|. +.++ .+. +.+|+.|+..+ +
T Consensus 47 ~~~~~v~~a~~~~~~~~~~~~~y~~---~~g~~---~lr~~ia~~~~~~~~~~~~~~~---i~~~~t~g~~~a~~~~~~~ 117 (412)
T 1yaa_A 47 WVLPSVKAAEKLIHNDSSYNHEYLG---ITGLP---SLTSNAAKIIFGTQSDALQEDR---VISVQSLSGTGALHISAKF 117 (412)
T ss_dssp CCCHHHHHHHHHHHTCTTCCCCCCC---TTCCH---HHHHHHHHHHHCTTCHHHHTTC---EEEEEEEHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHhhhcCcccccCCCC---CCCcH---HHHHHHHHHHhcCCCCCCCcce---EEEEeccchHhHHHHHHHH
Confidence 578999999987 654222223422 12333 6666555555443442 3321 233 55667788887 3
Q ss_pred HHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcC-Cc-EEEEcCCCCC
Q 016668 186 TAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR-PK-LIIAGASAYP 263 (385)
Q Consensus 186 ~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~-pk-lIi~~~s~~~ 263 (385)
..+++|||+|++.+|.|.++.. .+...|..+..++.. +++++.+|++++++.+++.+ ++ ++++..++||
T Consensus 118 ~~~~~~gd~Vl~~~p~~~~~~~--------~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nP 188 (412)
T 1yaa_A 118 FSKFFPDKLVYLSKPTWANHMA--------IFENQGLKTATYPYW-ANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNP 188 (412)
T ss_dssp HHHHCTTCCEEEEESCCTTHHH--------HHHTTTCCEEEEECE-ETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTT
T ss_pred HHHhCCCCEEEEeCCCCccHHH--------HHHHcCceEEEEeee-cCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 4556899999999987765421 234556655555531 33356799999999987643 24 4454777765
Q ss_pred --CCC---CHHHHHHHHHHcCcEEEEeccccccccccC---cc-c-CCCC--CC----cEEEECCCccCc--cccEEEEE
Q 016668 264 --RDF---DYPRMRQIADAVGALLMMDMAHISGLVAAS---VV-A-DPFK--YC----DVVTTTTHKSLR--GPRGGMIF 325 (385)
Q Consensus 264 --~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g---~~-~-~p~~--ga----Div~~S~hK~l~--GprgG~I~ 325 (385)
... ++++|.++|+++|+++|+|++|. ++..++ .. + ..+. +. ++++.|+||++. |.|.|+++
T Consensus 189 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~ 267 (412)
T 1yaa_A 189 TGLDPTSEQWVQIVDAIASKNHIALFDTAYQ-GFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFH 267 (412)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEEESCT-TTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEE
Confidence 344 36788999999999999999973 444332 11 1 0111 33 478999999983 67779988
Q ss_pred --E-----eCCCCchhH----HHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 326 --F-----KKDPVLGVE----LESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 326 --~-----~~~~~~~~~----~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
+ ++ + +.+.+........ ++++....++...+++.
T Consensus 268 ~~~~~~~~~~------~~~~~l~~~l~~~~~~~~-~~~~~~~~~a~~~~l~~ 312 (412)
T 1yaa_A 268 LALTKQAQNK------TIKPAVTSQLAKIIRSEV-SNPPAYGAKIVAKLLET 312 (412)
T ss_dssp EECCSCTTHH------HHHHHHHHHHHHHHHTTT-SSCCHHHHHHHHHHHHS
T ss_pred EEecCCCCCH------HHHHHHHHHHHHHHhhcc-CCCChHHHHHHHHHhCC
Confidence 6 33 4 6666655322222 23344444455555543
No 168
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.67 E-value=1.4e-15 Score=152.36 Aligned_cols=227 Identities=16% Similarity=0.189 Sum_probs=146.8
Q ss_pred hhcccCChH-HHHHHHHHHHHhh-hccccccCC-------CCCcHHHHHHHhhHh-hccCCCCCCCCCCCCCcHHHHHHH
Q 016668 81 YSLGEADPE-VCEIITKEKERQF-KSLELIASE-------NFTSRAVMEAVGSCL-TNKYSEGLPGKRYYGGNEYIDELE 150 (385)
Q Consensus 81 ~~l~~~dp~-~~~~i~~e~~~~~-~~l~Liase-------n~~s~~V~~al~s~l-~~~y~~g~p~~r~~~G~~~~~~le 150 (385)
.++..++|. ++.+.++.+...+ .-|+|--++ .++++.|.+++. .+ ......+|+. ..|.+ +++
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~---~~G~~---~lr 78 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLL---GNGTE---DFS 78 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCT---TSSCH---HHH
T ss_pred hcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCC---CCCcH---HHH
Confidence 467777775 6776665444333 446665332 346889999876 33 2223334554 34665 777
Q ss_pred HHHHHHHHHHcCCCC-CCCcce-eecCCcHHHHHHHHHHhcc--CCCEEeecCCCCCccccCCccccccccccCcceEEE
Q 016668 151 TLCQKRALAAFNLDE-NKWGVN-VQPLSGSPANFEVYTAILK--PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (385)
Q Consensus 151 ~~~~~~la~lfg~~~-~~~~~~-V~~~sGs~A~~~a~~all~--pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (385)
+.+.+++.+..+... .++ ++ +++.+|+.|+..++.++++ | |+|++.+|.+.+|.. .+...|..+..
T Consensus 79 ~aia~~~~~~~~~~~~~~~-i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~--------~~~~~g~~~~~ 148 (405)
T 3k7y_A 79 TLTQNLIFGNNSKYIEDKK-ICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVN--------MIESRGFNLKY 148 (405)
T ss_dssp HHHHHHHHCSSCTTTTTTC-EEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHH--------HHHTTTCEEEE
T ss_pred HHHHHHHcCCCCccccccc-eEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHH--------HHHHcCCeEEE
Confidence 777777654444321 112 22 4455556799999988877 9 999999998766532 34567775554
Q ss_pred EeccccCCCCCCCHHHHHHHhhhc-CCcEEEEcCC-CCCC--CCC---HHHHHHHHHHcCcEEEEeccccccccccCcc-
Q 016668 227 MPYRLDESTGLVDYDMLEKTAILF-RPKLIIAGAS-AYPR--DFD---YPRMRQIADAVGALLMMDMAHISGLVAASVV- 298 (385)
Q Consensus 227 i~~~~~~~~~~iD~d~le~~i~~~-~pklIi~~~s-~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~- 298 (385)
+++. +++++.+|++++++.+++. ++++|+++++ +||+ .++ +++|.++|+++|+++++|++| .++..++..
T Consensus 149 v~~~-~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y-~~l~~~~~~~ 226 (405)
T 3k7y_A 149 INFF-DYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAY-QGFGHTNLEE 226 (405)
T ss_dssp ECCE-ETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESC-TTTSSSSTTG
T ss_pred Eecc-ccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCc-ccccCCCccc
Confidence 5431 3345789999999998653 4578888765 6773 443 678889999999999999996 566543210
Q ss_pred --c--CCC-C-CCc-EEEECCCccC--ccccEEEEEE
Q 016668 299 --A--DPF-K-YCD-VVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 299 --~--~p~-~-gaD-iv~~S~hK~l--~GprgG~I~~ 326 (385)
+ ..+ + +.. +++.|++|+| +|+|.|++++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~ 263 (405)
T 3k7y_A 227 DVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHI 263 (405)
T ss_dssp GGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred chHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEE
Confidence 0 011 2 223 6789999997 6999999865
No 169
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.67 E-value=1.3e-15 Score=150.31 Aligned_cols=227 Identities=15% Similarity=0.174 Sum_probs=138.7
Q ss_pred cccCCh-HHHHHHHHHHHHhh-hccccccCC---C----CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHH
Q 016668 83 LGEADP-EVCEIITKEKERQF-KSLELIASE---N----FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLC 153 (385)
Q Consensus 83 l~~~dp-~~~~~i~~e~~~~~-~~l~Liase---n----~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~ 153 (385)
+...++ .++.+.+..+.... .-++|-..+ + ...+.+.+++...+.+....+|+. ..|.+ ++++.+
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~---~lr~~i 80 (401)
T 7aat_A 7 VEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLP---IAGLA---DFTRAS 80 (401)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCC---TTCCH---HHHHHH
T ss_pred CCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCC---CCCCH---HHHHHH
Confidence 444555 35555544333222 235554222 2 224578888776654333334543 23444 666655
Q ss_pred HHHHHHHcCCC--CCCCcce-eecCCcHHHHHHHHHHhc---cCCCEEeecCCCCCccccCCccccccccccCcceEEEE
Q 016668 154 QKRALAAFNLD--ENKWGVN-VQPLSGSPANFEVYTAIL---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM 227 (385)
Q Consensus 154 ~~~la~lfg~~--~~~~~~~-V~~~sGs~A~~~a~~all---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i 227 (385)
++++.+.+|.+ .++ +. |++.+|++|+..++.++. +|||+|++.+|.|.+|.. .+...|..+..+
T Consensus 81 a~~~~~~~~~~~~~~~--i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~g~~~~~~ 150 (401)
T 7aat_A 81 AELALGENSEAFKSGR--YVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTP--------IFRDAGLQLQAY 150 (401)
T ss_dssp HHHHHCTTCHHHHTTC--EEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHH--------HHHHTTCEEEEE
T ss_pred HHHhcCCCccccccCc--eEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHH--------HHHHcCCeeEee
Confidence 55555544532 321 11 125566779998876664 999999999987765532 344567655555
Q ss_pred eccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCc---
Q 016668 228 PYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV--- 297 (385)
Q Consensus 228 ~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~--- 297 (385)
++. +++++.+|++++++.++. .++++|+++.++||+ .. ++++|.++|+++|+++++|++| .++...+.
T Consensus 151 ~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay-~~~~~~~~~~~ 228 (401)
T 7aat_A 151 RYY-DPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAY-QGFASGDINRD 228 (401)
T ss_dssp ECE-ETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESC-TTTTTSCHHHH
T ss_pred eee-ccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEcccc-ccccCCCcccc
Confidence 532 223578999988877754 256788888888764 33 4788999999999999999997 44443321
Q ss_pred ccC--CC-C--CCcEEEECCCccC--ccccEEEEEEe
Q 016668 298 VAD--PF-K--YCDVVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 298 ~~~--p~-~--gaDiv~~S~hK~l--~GprgG~I~~~ 327 (385)
..+ .+ + .-.+++.|+||++ +|+|.|+++..
T Consensus 229 ~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~ 265 (401)
T 7aat_A 229 AWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVI 265 (401)
T ss_dssp THHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEE
T ss_pred HHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEE
Confidence 000 01 1 2347899999997 68888998873
No 170
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.67 E-value=1.9e-15 Score=148.53 Aligned_cols=195 Identities=18% Similarity=0.159 Sum_probs=123.7
Q ss_pred cHHHHHHHhh-HhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcce-eecCCcHHHHHHHH--HHh
Q 016668 115 SRAVMEAVGS-CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVN-VQPLSGSPANFEVY--TAI 188 (385)
Q Consensus 115 s~~V~~al~s-~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~-V~~~sGs~A~~~a~--~al 188 (385)
++.|++++.. .+.+....+|+. ..|.+ ++++..++++....+. +.+. ++ +.+.+|++|+..++ .++
T Consensus 46 ~~~v~~a~~~~~~~~~~~~~y~~---~~g~~---~lr~~la~~~~~~~~~~~~~~~--~~i~~t~g~~~a~~~~~~~~~~ 117 (397)
T 3fsl_A 46 LQAVAEAEARLNAQPHGASLYLP---MEGLN---CYRHAIAPLLFGADHPVLKQQR--VATIQTLGGSGALKVGADFLKR 117 (397)
T ss_dssp CHHHHHHHHHHHHSCCCCCCCCC---TTCCH---HHHHHHHHHHHCTTCHHHHTTC--EEEEEESHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhccCccccccCCC---CCchH---HHHHHHHHHHhcCCcccccccc--eEEEEcCCcHHHHHHHHHHHHh
Confidence 4899999987 665433334543 22443 5555444444333221 2210 13 34455567998884 567
Q ss_pred ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC--C
Q 016668 189 LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--R 264 (385)
Q Consensus 189 l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~--~ 264 (385)
++|||+|++.+|.|.++.. .+...|..+..+++. +++++.+|++++++.+++. ++++++++.++|| .
T Consensus 118 ~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~ 188 (397)
T 3fsl_A 118 YFPESGVWVSDPTWENHVA--------IFAGAGFEVSTYPWY-DEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGA 188 (397)
T ss_dssp HCTTCCEEEESSCCHHHHH--------HHHHTTCCEEEECCE-ETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCC
T ss_pred cCCCCeEEEeCCCchhHHH--------HHHHcCCceEEEeee-eccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCc
Confidence 8999999999987655421 334567655555532 2245789999999999742 4567777777765 3
Q ss_pred CC---CHHHHHHHHHHcCcEEEEeccccccccccC--cccC--CC-C--CCcEEEECCCccC--ccccEEEEEEe
Q 016668 265 DF---DYPRMRQIADAVGALLMMDMAHISGLVAAS--VVAD--PF-K--YCDVVTTTTHKSL--RGPRGGMIFFK 327 (385)
Q Consensus 265 ~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g--~~~~--p~-~--gaDiv~~S~hK~l--~GprgG~I~~~ 327 (385)
.. ++++|+++|+++|+++++|++| .++..++ ..+. .+ + ...+++.|++|++ +|.|.|+++..
T Consensus 189 ~~~~~~l~~l~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~ 262 (397)
T 3fsl_A 189 DLTNDQWDAVIEILKARELIPFLDIAY-QGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVM 262 (397)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEESC-TTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEE
T ss_pred CCCHHHHHHHHHHHHhCCEEEEEecCc-hhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEe
Confidence 43 4668999999999999999998 4444331 1111 11 1 2347889999997 47888998763
No 171
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.67 E-value=7.4e-16 Score=149.37 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=143.3
Q ss_pred hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHH
Q 016668 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPA 180 (385)
Q Consensus 103 ~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A 180 (385)
.-+++-.++|+ +++.|.+++...+... .+||.. +. .++ ++++++++|++.+ ..+.+++|++|
T Consensus 27 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~--~~y~~~----~~---~~l----~~~la~~~~~~~~---~i~~~~g~t~a 90 (361)
T 3ftb_A 27 ELLDYSSNINPLGIPKSFLNNIDEGIKNL--GVYPDV----NY---RRL----NKSIENYLKLKDI---GIVLGNGASEI 90 (361)
T ss_dssp -CEETTCCCCTTCSCHHHHTTHHHHHHGG--GSCCCT----TC---HHH----HHHHHHHHTCCSC---EEEEESSHHHH
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHHh--cCCCCc----cH---HHH----HHHHHHHhCCCcc---eEEEcCCHHHH
Confidence 34666655554 5899999998776542 245431 21 244 4567888898764 13444556679
Q ss_pred HHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCC
Q 016668 181 NFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGAS 260 (385)
Q Consensus 181 ~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s 260 (385)
+..++.++ |+|++.++.|.++.. .+...|..+..++ +++ ++.+|++++++.+++ +|+|++..+
T Consensus 91 l~~~~~~~----d~vi~~~~~~~~~~~--------~~~~~g~~~~~~~--~~~-~~~~~~~~l~~~l~~--~~~v~i~~p 153 (361)
T 3ftb_A 91 IELSISLF----EKILIIVPSYAEYEI--------NAKKHGVSVVFSY--LDE-NMCIDYEDIISKIDD--VDSVIIGNP 153 (361)
T ss_dssp HHHHHTTC----SEEEEEESCCTHHHH--------HHHHTTCEEEEEE--CCT-TSCCCHHHHHHHTTT--CSEEEEETT
T ss_pred HHHHHHHc----CcEEEecCChHHHHH--------HHHHcCCeEEEee--cCc-ccCCCHHHHHHhccC--CCEEEEeCC
Confidence 98888877 999999886654321 3345576555444 542 356888999999865 899988777
Q ss_pred CCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C--CCcEEEECCCccC--ccccEEEEEEeC
Q 016668 261 AYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K--YCDVVTTTTHKSL--RGPRGGMIFFKK 328 (385)
Q Consensus 261 ~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~--gaDiv~~S~hK~l--~GprgG~I~~~~ 328 (385)
++| ...+ +++|+++|+++|+++++|++|. ++... .....+ . ...++++|+||++ +|.+.|++++.+
T Consensus 154 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~ 231 (361)
T 3ftb_A 154 NNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFI-EFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN 231 (361)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSG-GGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC
T ss_pred CCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcch-hhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC
Confidence 765 3444 7778888889999999999984 33332 111221 1 2237789999997 567889988444
Q ss_pred CCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHH
Q 016668 329 DPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 329 ~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~ 365 (385)
+ ++.+.+.....+. +++....+++..+++
T Consensus 232 ~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~ 260 (361)
T 3ftb_A 232 K-----EIAAKIKAKQNPW---NINCFAEMAAINCLK 260 (361)
T ss_dssp H-----HHHHHHHTTSCTT---CSCHHHHHHHHHTSS
T ss_pred H-----HHHHHHHhhCCCC---CCCHHHHHHHHHHhc
Confidence 3 7888776654332 455566666555554
No 172
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.67 E-value=4.5e-16 Score=155.35 Aligned_cols=240 Identities=15% Similarity=0.095 Sum_probs=147.3
Q ss_pred hccccccCCC--C-CcHHH--HHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCCcceeecCC
Q 016668 103 KSLELIASEN--F-TSRAV--MEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLS 176 (385)
Q Consensus 103 ~~l~Liasen--~-~s~~V--~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lf-g~~~~~~~~~V~~~s 176 (385)
.-+++-.+++ + .++.+ ++++...+......+|+. ..|.+ ++++.+++++.+.+ +++.+++...+++.+
T Consensus 48 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~---~~g~~---~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g 121 (430)
T 2x5f_A 48 TTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAP---PQGIE---ELRDLWQQKMLRDNPELSIDNMSRPIVTNA 121 (430)
T ss_dssp CSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCC---TTCCH---HHHHHHHHHHHHHCTTCCGGGBCCCEEESH
T ss_pred CcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCC---CCCCH---HHHHHHHHHHhccCcccCCCccceEEEcCC
Confidence 3456654444 1 35555 666655443211224443 12333 66665555554443 555431000234445
Q ss_pred cHHHHHHHHHHhccCCCEEeecCCCCCccccCCcccccccccc-CcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCc
Q 016668 177 GSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSG-TSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPK 253 (385)
Q Consensus 177 Gs~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~-~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pk 253 (385)
|++|+..++.++++|||+|++.+|.|.++.. .+.. .|..+. .++++++++.+|++++++.++.. +++
T Consensus 122 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~~g~~~~--~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 191 (430)
T 2x5f_A 122 LTHGLSLVGDLFVNQDDTILLPEHNWGNYKL--------VFNTRNGANLQ--TYPIFDKDGHYTTDSLVEALQSYNKDKV 191 (430)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEESSCCTHHHH--------HHTTTTCCEEE--EECCBCTTSCBCSHHHHHHHHHCCSSEE
T ss_pred chHHHHHHHHHHhCCCCEEEEcCCcCccHHH--------HHHHhcCCeEE--EEeccCccCCcCHHHHHHHHHhcCCCCE
Confidence 5679999999999999999999987765421 2334 566444 44455433679999999998652 578
Q ss_pred EEEEcCCCCC--CCCC---HHHHHHHHHH-----cCcEEEEeccccccccccCc-ccC---CC---CCC---cEEEECCC
Q 016668 254 LIIAGASAYP--RDFD---YPRMRQIADA-----VGALLMMDMAHISGLVAASV-VAD---PF---KYC---DVVTTTTH 313 (385)
Q Consensus 254 lIi~~~s~~~--~~~d---l~~I~~ia~~-----~ga~livD~ah~~Gli~~g~-~~~---p~---~ga---Div~~S~h 313 (385)
+|++..++|| ...+ +++|.++|++ +|+++|+|++|. ++...+. ++. .+ ... +++++|+|
T Consensus 192 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 270 (430)
T 2x5f_A 192 IMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYY-GLFYEDVYTQSLFTALTNLHSNAILPIRLDGAT 270 (430)
T ss_dssp EEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTT-TCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHH
T ss_pred EEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcc-cccCCcccchHHHHHHhhccCCcceEEEEEecc
Confidence 8888777765 4566 8899999999 999999999985 3433332 112 12 133 57799999
Q ss_pred ccC--ccccEEEEEE---eCCCCchhHHHHHHhhccCC---CccCCChHHHHHHHHHHHH
Q 016668 314 KSL--RGPRGGMIFF---KKDPVLGVELESAINNAVFP---GLQGGPHNHTIGGLAVCLK 365 (385)
Q Consensus 314 K~l--~GprgG~I~~---~~~~~~~~~~~~~i~~~~fp---~~qg~p~~~~iaala~Al~ 365 (385)
|+| +|.|.|++++ ++ ++.+.+...... ....+++....+++..+++
T Consensus 271 K~~~~~G~riG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 324 (430)
T 2x5f_A 271 KEFFAWGFRVGFMTFGTSDQ------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLK 324 (430)
T ss_dssp HHTTCGGGCCEEEEEBCCCH------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCeEEEEEecCCH------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHc
Confidence 998 5677899999 65 566666543221 0122345555556566665
No 173
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.66 E-value=1.9e-15 Score=148.98 Aligned_cols=218 Identities=18% Similarity=0.149 Sum_probs=138.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.+.+++...+.... +.+.. + ..+... ..++++++++|.+. .+.+++|++|+..++.+++.
T Consensus 56 ~~p~v~~a~~~~~~~~~---~~~~~-~-~~~~~~----~l~~~la~~~~~~~-----v~~~~gg~~a~~~al~~~~~~~~ 121 (406)
T 4adb_A 56 AHPELREALNEQASKFW---HTGNG-Y-TNEPVL----RLAKKLIDATFADR-----VFFCNSGAEANEAALKLARKFAH 121 (406)
T ss_dssp TCHHHHHHHHHHHTTCS---CCCTT-S-CCHHHH----HHHHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcc---cccCC-c-CCHHHH----HHHHHHHhhCCCCe-----EEEeCcHHHHHHHHHHHHHHHHH
Confidence 47899999987765421 11111 2 233333 34567889998763 46677888999999998865
Q ss_pred ----CC-CEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCCCCCCCHHHHHHHhhhcCCc
Q 016668 191 ----PH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (385)
Q Consensus 191 ----pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pk 253 (385)
+| |+|++.++.+.++... .....+ ..+..++ ..|+++|++.++. +++
T Consensus 122 ~~~~~g~~~vi~~~~~y~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~~ 185 (406)
T 4adb_A 122 DRYGSHKSGIVAFKNAFHGRTLF-------TVSAGGQPAYSQDFAPLPADIRHAA--------YNDINSASALIDD-STC 185 (406)
T ss_dssp HHTCTTCCEEEEETTCCCCSSHH-------HHHHSSCGGGTGGGCSCCSSEEEEC--------TTCHHHHHTTCST-TEE
T ss_pred hcCCCCCcEEEEECCCcCCCcHH-------HhhccCCccccccCCCCCCCceEeC--------CCcHHHHHHHhcC-CeE
Confidence 66 9999998876443210 011111 1112221 2489999998864 789
Q ss_pred EEEEcCCCCCC-------CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccEE
Q 016668 254 LIIAGASAYPR-------DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGG 322 (385)
Q Consensus 254 lIi~~~s~~~~-------~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~GprgG 322 (385)
+|+++ +++|. ..++++|.++|+++|++||+|++|. |+...|... ..++ ..|+++ +||++ +|.++|
T Consensus 186 ~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~t--~sK~~~~G~r~G 261 (406)
T 4adb_A 186 AVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQT-GVGRTGELYAYMHYGVTPDLLT--TAKALGGGFPVG 261 (406)
T ss_dssp EEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEE--ECGGGGTTSCCE
T ss_pred EEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCccchhHHHHhcCCCCCEEE--echhhcCCCCeE
Confidence 99988 55552 2368999999999999999999995 654333211 1112 457774 59998 456889
Q ss_pred EEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++++++ ++.+.+......... +++....++...+++.+..+++
T Consensus 262 ~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~ 304 (406)
T 4adb_A 262 ALLATE------ECARVMTVGTHGTTY-GGNPLASAVAGKVLELINTPEM 304 (406)
T ss_dssp EEEECH------HHHHTCCTTSSCCSS-TTCHHHHHHHHHHHHHHSSHHH
T ss_pred EEEEcH------HHHhhhccCCcCCCC-CCCHHHHHHHHHHHHHHHhcCH
Confidence 999887 677766554333333 3445556666667776644433
No 174
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.66 E-value=3.2e-15 Score=150.83 Aligned_cols=226 Identities=16% Similarity=0.209 Sum_probs=136.7
Q ss_pred hhcccCCh-HHHHHHHHHHHHhhh-cccccc-------CCCCCcHHHHHHHhhHh--hccCCCCCCCCCCCCCcHHHHHH
Q 016668 81 YSLGEADP-EVCEIITKEKERQFK-SLELIA-------SENFTSRAVMEAVGSCL--TNKYSEGLPGKRYYGGNEYIDEL 149 (385)
Q Consensus 81 ~~l~~~dp-~~~~~i~~e~~~~~~-~l~Lia-------sen~~s~~V~~al~s~l--~~~y~~g~p~~r~~~G~~~~~~l 149 (385)
.++...++ .++.+.++.+...+. .++|-. +...+.+.|.+++.... ......+|+. ..|.+ ++
T Consensus 26 ~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~---~~G~~---~l 99 (448)
T 3meb_A 26 SGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPP---VAGFP---LF 99 (448)
T ss_dssp TTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCC---TTCCH---HH
T ss_pred hcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCC---CcchH---HH
Confidence 45666666 466666554433332 255431 22335677777755443 1122233433 23443 55
Q ss_pred HHHHHHHHHHHcCCC-----CCCCcceeecCCcHHHHHH--HHHHhccCCCEEeecCCCCCccccCCccccccccc----
Q 016668 150 ETLCQKRALAAFNLD-----ENKWGVNVQPLSGSPANFE--VYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVS---- 218 (385)
Q Consensus 150 e~~~~~~la~lfg~~-----~~~~~~~V~~~sGs~A~~~--a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~---- 218 (385)
++.+++++ +|.+ .++. +.+++.+|+.|+.. .+.++++|||+|++++|.|.+|.. .+.
T Consensus 100 r~~ia~~l---~g~~~~~~~~~~i-~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~--------~~~~~~~ 167 (448)
T 3meb_A 100 LEAAQFLM---FGKDSKAAQEGRI-ASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYG--------IYDKVFN 167 (448)
T ss_dssp HHHHHHHH---HCTTCHHHHTTCE-EEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHH--------HHHHHHC
T ss_pred HHHHHHHh---cCCCccccCcCcE-EEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHH--------HHHhhHH
Confidence 55433332 4876 3211 11226667788876 566778999999999997766532 234
Q ss_pred cCcceEEEEeccccCC-CCCCCHHHHHHHhhh--cCCcEEEEcCCCCCC--CCC---HHHHHHHHHHcCcEEEEeccccc
Q 016668 219 GTSIYFESMPYRLDES-TGLVDYDMLEKTAIL--FRPKLIIAGASAYPR--DFD---YPRMRQIADAVGALLMMDMAHIS 290 (385)
Q Consensus 219 ~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~--~~pklIi~~~s~~~~--~~d---l~~I~~ia~~~ga~livD~ah~~ 290 (385)
..|..+..+++. +++ ++.+|++++++.++. .++++++++.++||+ ..+ +++|+++|+++|+++++|++| .
T Consensus 168 ~~G~~v~~~~~~-~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay-~ 245 (448)
T 3meb_A 168 KLKVPYKEYTYL-RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAY-Q 245 (448)
T ss_dssp TTTSCCEEECCB-CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-T
T ss_pred hCCCeEEEEecc-ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccc-c
Confidence 566655544431 444 578999999999875 245677777777763 444 667999999999999999997 4
Q ss_pred cccccCc---cc--CCC-C-CCc-EEEECCCccC--ccccEEEE--EE
Q 016668 291 GLVAASV---VA--DPF-K-YCD-VVTTTTHKSL--RGPRGGMI--FF 326 (385)
Q Consensus 291 Gli~~g~---~~--~p~-~-gaD-iv~~S~hK~l--~GprgG~I--~~ 326 (385)
++..++. .. ..+ + +.+ +++.|+||+| +|+|.|++ ++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~ 293 (448)
T 3meb_A 246 GFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVH 293 (448)
T ss_dssp TTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEEC
T ss_pred cccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeee
Confidence 4443321 00 011 1 334 6799999987 57888887 55
No 175
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.66 E-value=8.7e-16 Score=152.26 Aligned_cols=228 Identities=14% Similarity=0.160 Sum_probs=130.6
Q ss_pred hhhcccCChH-HHHHHHHHHHHhh-hccccccC---CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016668 80 DYSLGEADPE-VCEIITKEKERQF-KSLELIAS---ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (385)
Q Consensus 80 ~~~l~~~dp~-~~~~i~~e~~~~~-~~l~Lias---en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~ 154 (385)
..++...+|+ ++.+.++.+.... .-++|-.+ +...++.+.+++.... .....+|.. ..|.+ ++++.++
T Consensus 17 ~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a~-~~~~~~y~~---~~g~~---~lr~~ia 89 (409)
T 4eu1_A 17 QGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQAT-LGTNMDYAP---VTGIA---SFVEEAQ 89 (409)
T ss_dssp ----------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTCC-CCSCCCCCC---TTCCH---HHHHHHH
T ss_pred hhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhcC-ccccccCCC---CCCcH---HHHHHHH
Confidence 3567777886 6777766554433 33555432 3344666777776541 222223332 22433 5665444
Q ss_pred HHHHHHcCCC-----CCCCcceeecCCcHHHHHHH---HHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEE
Q 016668 155 KRALAAFNLD-----ENKWGVNVQPLSGSPANFEV---YTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFES 226 (385)
Q Consensus 155 ~~la~lfg~~-----~~~~~~~V~~~sGs~A~~~a---~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~ 226 (385)
+++ +|.+ .+++ ..+++.+|+.|+..+ +.+++++||+|++.+|.|.++.. .+...|..+..
T Consensus 90 ~~~---~~~~~~~~~~~~i-~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~~~g~~~~~ 157 (409)
T 4eu1_A 90 KLC---FGPTCAALRDGRI-ASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHES--------IFAKAGMELTP 157 (409)
T ss_dssp HHH---HCSSCHHHHTTCE-EEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHH--------HHHHTTCEEEE
T ss_pred HHH---cCCCchhhccCce-eeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHH--------HHHHcCCeEEE
Confidence 433 4655 2211 012356667677654 34557899999999987765532 34456765544
Q ss_pred EeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEeccccccccccCc--
Q 016668 227 MPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAASV-- 297 (385)
Q Consensus 227 i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~g~-- 297 (385)
+++. +++++.+|++++++.++.. ++++++++.++|| ...+ +++|.++|+++|+++|+|++| .++...+.
T Consensus 158 ~~~~-~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y-~~~~~~~~~~ 235 (409)
T 4eu1_A 158 YSYY-DPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAY-QGFATGQLDY 235 (409)
T ss_dssp ECCE-ETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESC-TTTTTSCHHH
T ss_pred EEee-cCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccc-cccccCCccc
Confidence 4432 2345689999999998642 3556676777776 3455 566999999999999999997 44444331
Q ss_pred -cc--CCC-C-CCc-EEEECCCccC--ccccEEEE--EEeC
Q 016668 298 -VA--DPF-K-YCD-VVTTTTHKSL--RGPRGGMI--FFKK 328 (385)
Q Consensus 298 -~~--~p~-~-gaD-iv~~S~hK~l--~GprgG~I--~~~~ 328 (385)
.. ..+ + ..+ +++.|++|++ +|.|.|++ +..+
T Consensus 236 ~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~ 276 (409)
T 4eu1_A 236 DAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTAS 276 (409)
T ss_dssp HTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSS
T ss_pred chHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCC
Confidence 01 011 2 233 6889999997 57788986 5544
No 176
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.65 E-value=7.9e-17 Score=156.20 Aligned_cols=228 Identities=12% Similarity=0.077 Sum_probs=141.6
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCC---cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCC-c-HH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG---NEYIDELETLCQKRALAAFNLDENKWGVNVQPLS-G-SP 179 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G---~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~s-G-s~ 179 (385)
+.+.+++..+|+.|++++.+.+.+ +. .++...|.. .....++.+.+++++++++|++..+ +|.+++ + +.
T Consensus 5 ~~~~~g~~~~p~~v~~a~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~---~v~~~~g~gt~ 78 (360)
T 1w23_A 5 FNFNAGPSALPKPALERAQKELLN-FN--DTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDY---QILFLQGGASL 78 (360)
T ss_dssp EECCSSSCCCCHHHHHHHHHTSSS-ST--TSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE---EEEEESSHHHH
T ss_pred EeecCCCcCCCHHHHHHHHHHhhh-hc--cccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc---eEEEECCcchH
Confidence 556677778999999999877643 21 122111110 1222344445788999999996311 344444 3 67
Q ss_pred HHHHHHHHhccC---CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHH-HhhhcCCcEE
Q 016668 180 ANFEVYTAILKP---HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEK-TAILFRPKLI 255 (385)
Q Consensus 180 A~~~a~~all~p---GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~-~i~~~~pklI 255 (385)
|+..++.+++.+ ||.|++..+. |.+. ..+...| .+..++ ++++++.+|++++++ .++. ++|+|
T Consensus 79 al~~~~~~l~~~~~~g~~vi~~~~~---~~~~------~~~~~~g-~~~~v~--~~~~~~~~d~~~l~~~~i~~-~~k~v 145 (360)
T 1w23_A 79 QFTMLPMNLLTKGTIGNYVLTGSWS---EKAL------KEAKLLG-ETHIAA--STKANSYQSIPDFSEFQLNE-NDAYL 145 (360)
T ss_dssp HHHHHHHHHCCTTCEEEEEECSHHH---HHHH------HHHHTTS-EEEEEE--ECGGGTSCSCCCGGGCCCCT-TEEEE
T ss_pred HHHHHHHHhcCCCCcccEEEecchh---HHHH------HHHHHhC-CeEEee--cccccCcCCccchHhhccCC-CCCEE
Confidence 999999999865 5666655432 2211 1233456 655555 443345689999988 7743 78999
Q ss_pred EEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccccE-EEEEEeCCCCc
Q 016668 256 IAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGPRG-GMIFFKKDPVL 332 (385)
Q Consensus 256 i~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~ 332 (385)
+++.+++| ...+ +|++++|++|++|++|..|.. +.++...|++++|+||++. |.| |++++++
T Consensus 146 ~~~~~~nptG~~~~-----~i~~~~~~~li~D~a~~~~~~-----~~~~~~~di~~~s~sK~~~-~~G~G~~~~~~---- 210 (360)
T 1w23_A 146 HITSNNTIYGTQYQ-----NFPEINHAPLIADMSSDILSR-----PLKVNQFGMIYAGAQKNLG-PSGVTVVIVKK---- 210 (360)
T ss_dssp EEESEETTTTEECS-----SCCCCCSSCEEEECTTTTTSS-----CCCGGGCSEEEEETTTTTS-CTTCEEEEEEH----
T ss_pred EEeCCCCCcceecc-----cccccCCceEEEechhhcCCC-----CcCcccCCEEEEEcccccC-CCCcEEEEEcH----
Confidence 88765554 3444 333489999999999976532 1123333899999999884 656 9999887
Q ss_pred hhHHHHHHhhcc-----------CCCccCCChHHHHHHHHHHHHHhh
Q 016668 333 GVELESAINNAV-----------FPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 333 ~~~~~~~i~~~~-----------fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
++.+++.... .....++++...++++..+++.+.
T Consensus 211 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~ 255 (360)
T 1w23_A 211 --DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIK 255 (360)
T ss_dssp --HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHH
T ss_pred --HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHH
Confidence 4444433211 011235677777777777887654
No 177
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.65 E-value=1.9e-15 Score=149.60 Aligned_cols=218 Identities=12% Similarity=0.104 Sum_probs=128.9
Q ss_pred hhhcccCCh-HHHHHHHHHHHHh------hhccccccCCC--CCcHHHHHHHhhHhhccC----CCCCCCCCCCCCcHHH
Q 016668 80 DYSLGEADP-EVCEIITKEKERQ------FKSLELIASEN--FTSRAVMEAVGSCLTNKY----SEGLPGKRYYGGNEYI 146 (385)
Q Consensus 80 ~~~l~~~dp-~~~~~i~~e~~~~------~~~l~Liasen--~~s~~V~~al~s~l~~~y----~~g~p~~r~~~G~~~~ 146 (385)
+.++.++++ +.|..+.+..... ..-+++...++ .+++.|++++...+.... ..+|+. ..|.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~---~~g~~-- 78 (400)
T 3asa_A 4 NPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYGP---DFGLP-- 78 (400)
T ss_dssp CHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCCC---TTCCH--
T ss_pred chhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCCC---CCCCH--
Confidence 445555555 4454443333321 12345544433 468999999887764321 122321 11332
Q ss_pred HHHHHHHHHHHHHH--cC-CCCCCCcceeecCCc-HHHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcc
Q 016668 147 DELETLCQKRALAA--FN-LDENKWGVNVQPLSG-SPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (385)
Q Consensus 147 ~~le~~~~~~la~l--fg-~~~~~~~~~V~~~sG-s~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (385)
++++ .++++ +| ++.+ +|.+++| ++++..+ ..+++|||+|++.+|.|.++.. .+...|.
T Consensus 79 -~lr~----~la~~l~~g~~~~~----~v~~~~G~~~al~~~-~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~ 140 (400)
T 3asa_A 79 -ALRQ----KLSEDFYRGFVDAK----EIFISDGAKVDLFRL-LSFFGPNQTVAIQDPSYPAYLD--------IARLTGA 140 (400)
T ss_dssp -HHHH----HHHHTTSTTSSCGG----GEEEESCHHHHHHHH-HHHHCSSCEEEEEESCCHHHHH--------HHHHTTC
T ss_pred -HHHH----HHHHHHHcCCCCHH----HEEEccChHHHHHHH-HHHcCCCCEEEECCCCcHHHHH--------HHHHcCC
Confidence 5554 45555 57 5543 3555555 5577764 4667999999999987655421 2344565
Q ss_pred e-EEEEeccccCC-CCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEecccccccccc
Q 016668 223 Y-FESMPYRLDES-TGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLVAA 295 (385)
Q Consensus 223 ~-~~~i~~~~~~~-~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli~~ 295 (385)
. +..++ ++++ ....|+++ + .++|+|+++.++|| ...+ +++|.++|+++|+++|+|++|. ++...
T Consensus 141 ~~~~~~~--~~~~~~~~~~l~~----~--~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~ 211 (400)
T 3asa_A 141 KEIIALP--CLQENAFFPEFPE----D--THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYS-TFISD 211 (400)
T ss_dssp SEEEEEE--CCGGGTTCCCCCT----T--CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTG-GGCCC
T ss_pred cceEecc--cchhcCcccChhh----c--cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhh-hhhcC
Confidence 4 55555 4322 22344321 1 36899988777765 4455 6778899999999999999985 34333
Q ss_pred CcccCCC---CC-Cc--EEEECCCccC--ccccEEEEEEeCC
Q 016668 296 SVVADPF---KY-CD--VVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 296 g~~~~p~---~g-aD--iv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
+..+.++ ++ .| +++.|+||+| +|.|.|+++++++
T Consensus 212 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~ 253 (400)
T 3asa_A 212 PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQE 253 (400)
T ss_dssp TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTT
T ss_pred CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChh
Confidence 3222122 22 34 7899999997 6778899999875
No 178
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.65 E-value=3.1e-15 Score=147.31 Aligned_cols=224 Identities=17% Similarity=0.108 Sum_probs=136.6
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--c
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--K 190 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~ 190 (385)
++++.+.+++...+.. +..+ . +.| ..+ ..+.+++++++++|++.+ ..+.++||++|+..++.++. .
T Consensus 61 ~~~~~v~~a~~~~~~~-~~~~--~-~~~-~~~----~~~~l~~~la~~~~~~~~---~v~~~~gg~~a~~~al~~~~~~~ 128 (395)
T 1vef_A 61 HGNPEVVEAVKRQAET-LMAM--P-QTL-PTP----MRGEFYRTLTAILPPELN---RVFPVNSGTEANEAALKFARAHT 128 (395)
T ss_dssp BTCHHHHHHHHHHHHH-CCCC--C-TTS-CCH----HHHHHHHHHHHTSCTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHh-CCCC--c-ccc-CCH----HHHHHHHHHHHhcCCCcC---EEEEcCcHHHHHHHHHHHHHHHh
Confidence 4789999999887754 2211 1 122 223 333355678889987543 23556678889999998764 7
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEE---EEeccccCCC---CCCCHHHHHHHhhhcCCcEEEEcCCC--C
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE---SMPYRLDEST---GLVDYDMLEKTAILFRPKLIIAGASA--Y 262 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~---~i~~~~~~~~---~~iD~d~le~~i~~~~pklIi~~~s~--~ 262 (385)
+||+|++.++.+.+... ..+...|.... ..+ +..+. ...|++++++.++. ++++|++++++ +
T Consensus 129 ~~~~vi~~~~~y~~~~~-------~~~~~~g~~~~~~~~~p--~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~t 198 (395)
T 1vef_A 129 GRKKFVAAMRGFSGRTM-------GSLSVTWEPKYREPFLP--LVEPVEFIPYNDVEALKRAVDE-ETAAVILEPVQGEG 198 (395)
T ss_dssp SCCEEEEETTCCCCSSH-------HHHHTCCCHHHHGGGCS--CSSCEEEECTTCHHHHHHHCCT-TEEEEEECSEETTT
T ss_pred CCCeEEEEcCCcCCCch-------hhhhhcCCcccccccCC--CCCCeeEeCCCcHHHHHHHhcc-CEEEEEEeCccCCC
Confidence 89999998876532211 01122232100 001 00000 02589999999864 68898887544 3
Q ss_pred CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCcc-ccEEEEEEeCCCCchh
Q 016668 263 PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG-PRGGMIFFKKDPVLGV 334 (385)
Q Consensus 263 ~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~G-prgG~I~~~~~~~~~~ 334 (385)
|...+ +++|.++|+++|++|++|++|. |+...|.. + ...+ +.|++ |+||+|.+ ++.|++++++
T Consensus 199 G~~~~~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~------ 269 (395)
T 1vef_A 199 GVRPATPEFLRAAREITQEKGALLILDEIQT-GMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGVAVMRE------ 269 (395)
T ss_dssp TSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEEEEEEH------
T ss_pred CccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCCchhHhhhcCCCCCEE--EEcccccCCCceEEEEehH------
Confidence 55567 9999999999999999999996 65332321 1 1122 46876 66999854 5779999887
Q ss_pred HHHHHHhhccCCCccCCChHHHHHHHHHHHHHhh
Q 016668 335 ELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQ 368 (385)
Q Consensus 335 ~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~ 368 (385)
++.+.+........ .+++....++...+++.+.
T Consensus 270 ~~~~~l~~~~~~~~-~~~~~~~~~a~~~al~~~~ 302 (395)
T 1vef_A 270 EVARSMPKGGHGTT-FGGNPLAMAAGVAAIRYLE 302 (395)
T ss_dssp HHHHTSCTTSSCCS-STTCHHHHHHHHHHHHHHH
T ss_pred HHHhhhccCCcCCC-cCCCHHHHHHHHHHHHHHH
Confidence 56666654222221 2345555556666776553
No 179
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.64 E-value=5e-16 Score=155.07 Aligned_cols=233 Identities=14% Similarity=0.047 Sum_probs=138.7
Q ss_pred hhhhhcccCChHHHHHHHHHHHHhhhccccccCCCC-----CcHHHHHHHhhHhh--c-cCCCCCCCCCCCCCcHHHHHH
Q 016668 78 FVDYSLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVGSCLT--N-KYSEGLPGKRYYGGNEYIDEL 149 (385)
Q Consensus 78 ~~~~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~-----~s~~V~~al~s~l~--~-~y~~g~p~~r~~~G~~~~~~l 149 (385)
..+.+|......++....+.+. +...++|-.+++. +++.+++++...+. . ....+|+. ..|.+ ++
T Consensus 9 ~~~~~l~~~~~~~~~~~~~l~~-~~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~---~~G~~---~l 81 (422)
T 3d6k_A 9 YDAARLAQVREEVTAKYAELKA-KNLSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTKDGVDCRNYGG---LLGIA---DI 81 (422)
T ss_dssp ---------CHHHHHHHHHHHH-TTCCEECCCCSCCHHHHHTTGGGGGCSTTCCBCTTCCBTTSSCC---SSCCH---HH
T ss_pred CCHHHHHhhHHHHHHHHHHHhc-cCCeEeCCCCCCChhhCCCcHHHHHHHHHHHhhccchhhhCCCC---CCCCH---HH
Confidence 3456677778888877655433 2234666655552 34466666543311 1 11224443 22333 45
Q ss_pred HHHHHHHHHHHcCCCCCCCcceeecCCcH-HHH--HHHHHHhccC------------CCEEeecCCCCCccccCCccccc
Q 016668 150 ETLCQKRALAAFNLDENKWGVNVQPLSGS-PAN--FEVYTAILKP------------HDRIMGLDLPHGGHLSHGFMTPK 214 (385)
Q Consensus 150 e~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~--~~a~~all~p------------GD~Vl~~~~~~ggh~s~~~~~~~ 214 (385)
++ .+++++|++.+ +|.+++|+ +++ ..++.++.++ ||+|++.+|.|.++..
T Consensus 82 r~----~ia~~~~~~~~----~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~------- 146 (422)
T 3d6k_A 82 RE----LWAEALGLPAD----LVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFT------- 146 (422)
T ss_dssp HH----HHHHHHTCCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH-------
T ss_pred HH----HHHHHhCCChh----HEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHH-------
Confidence 44 56677788764 45566665 476 4566777666 3479999887655421
Q ss_pred cccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEE-EcCCCCC--CCCCHH---HHHHHHH-HcCcEEEEecc
Q 016668 215 RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLII-AGASAYP--RDFDYP---RMRQIAD-AVGALLMMDMA 287 (385)
Q Consensus 215 ~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi-~~~s~~~--~~~dl~---~I~~ia~-~~ga~livD~a 287 (385)
.+...|..+..++ +++ ++ +|++++++.++..++|+|+ +..++|| ...+.+ +|.++|+ ++|+++|+|++
T Consensus 147 -~~~~~g~~~~~v~--~~~-~g-~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~ 221 (422)
T 3d6k_A 147 -ITEHFGFEMINVP--MTD-EG-PDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNA 221 (422)
T ss_dssp -HHHHHTCEEEEEE--EET-TE-ECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECT
T ss_pred -HHHHcCCEEEecC--CCC-CC-CCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECC
Confidence 2345566554444 553 33 9999999998654688887 5666665 566655 7777777 89999999999
Q ss_pred ccc-cccccCcccCCC-------C--CCcEEEECCCcc-CccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 288 HIS-GLVAASVVADPF-------K--YCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 288 h~~-Gli~~g~~~~p~-------~--gaDiv~~S~hK~-l~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
|.. ++...+....++ + +.++++.|+||+ ++|+|.|++++++ ++.+.+...
T Consensus 222 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~------~l~~~l~~~ 282 (422)
T 3d6k_A 222 YALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK------ENIEWYASH 282 (422)
T ss_dssp TTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHH
T ss_pred ccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH------HHHHHHHHH
Confidence 863 443332111122 2 345889999996 4778999999986 576666543
No 180
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.64 E-value=2e-15 Score=148.36 Aligned_cols=194 Identities=15% Similarity=0.145 Sum_probs=122.0
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceee---cCCcHHHHHHHHHH
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQ---PLSGSPANFEVYTA 187 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~---~~sGs~A~~~a~~a 187 (385)
++++.+.+++...+.+....+|.. ..|.+ ++++...+++....+ ++.+ +|. +.+|+.|+..++.+
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~---~lr~~la~~~~~~~~~~~~~~----~v~~~~~~g~~~a~~~~~~~ 113 (396)
T 2q7w_A 44 PVLTSVKKAEQYLLENETTKNYLG---IDGIP---EFGRCTQELLFGKGSALINDK----RARTAQTPGGTGALRVAADF 113 (396)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCC---TTCCH---HHHHHHHHHHHCTTCHHHHTT----CEEEEEESHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHhhcCcccccCCCC---CCCCH---HHHHHHHHHHhcCCCCccccc----cEEEEecccchhhHHHHHHH
Confidence 467999999987664322223422 12333 566544444322212 1232 233 66677899988876
Q ss_pred h--ccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC
Q 016668 188 I--LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP 263 (385)
Q Consensus 188 l--l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~ 263 (385)
+ ++|||+|++.+|.|.++.. .+...|..+..+++... +++.+|++++++.+++. +++++++..++||
T Consensus 114 ~~~~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~np 184 (396)
T 2q7w_A 114 LAKNTSVKRVWVSNPSWPNHKS--------VFNSAGLEVREYAYYDA-ENHTLDFDALINSLNEAQAGDVVLFHGCCHNP 184 (396)
T ss_dssp HHHHSCCCEEEEEESCCTHHHH--------HHHHTTCEEEEEECEET-TTTEECHHHHHHHHTTCCTTCEEEEECSSCTT
T ss_pred HHHhCCCCEEEEcCCCchhHHH--------HHHHcCCceEEEecccC-CCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 5 5799999999987755421 23455665554443211 35679999999998653 2467777777766
Q ss_pred --CCC---CHHHHHHHHHHcCcEEEEeccccccccccC--ccc--CCCC--C-CcEEEECCCccC--ccccEEEEEE
Q 016668 264 --RDF---DYPRMRQIADAVGALLMMDMAHISGLVAAS--VVA--DPFK--Y-CDVVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 264 --~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g--~~~--~p~~--g-aDiv~~S~hK~l--~GprgG~I~~ 326 (385)
... ++++|.++|+++|+++++|++|. ++..++ ... ..+. + .++++.|+||++ +|.|.|++++
T Consensus 185 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 260 (396)
T 2q7w_A 185 TGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQ-GFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTL 260 (396)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEESCT-TSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecccc-cccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEE
Confidence 344 46789999999999999999974 333321 111 1121 2 237899999997 4778899987
No 181
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.64 E-value=1.6e-15 Score=150.19 Aligned_cols=227 Identities=12% Similarity=0.040 Sum_probs=135.4
Q ss_pred hhcccCChHHHHHHHHHHHHh--hhccccccCC-------CCCcHHHHHHHhhHhhcc-CCCCCCCCCCCCCcHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQ--FKSLELIASE-------NFTSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELE 150 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~--~~~l~Liase-------n~~s~~V~~al~s~l~~~-y~~g~p~~r~~~G~~~~~~le 150 (385)
+++..+++..+..+.+..... ...++|-.++ ..+++.|.+++...+.+. ...+|.. ..|.+ +++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~---~~g~~---~lr 80 (412)
T 1ajs_A 7 AEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLP---ILGLA---EFR 80 (412)
T ss_dssp TTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCC---TTCCH---HHH
T ss_pred hhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCC---CCCCH---HHH
Confidence 445566665444343332221 1335554333 245799999998765221 1223422 12333 566
Q ss_pred HHHHHHHHHHcCC--CCCCCcceee--cCCcHHHHHHHH--HHhccCC-----CEEeecCCCCCccccCCcccccccccc
Q 016668 151 TLCQKRALAAFNL--DENKWGVNVQ--PLSGSPANFEVY--TAILKPH-----DRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 151 ~~~~~~la~lfg~--~~~~~~~~V~--~~sGs~A~~~a~--~all~pG-----D~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
+...+++...+|. +.++ .+. +.+|+.|+..++ ..+++|| |+|++.+|.|.++.. .+..
T Consensus 81 ~~la~~~~~~~~~~~~~~~---v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~--------~~~~ 149 (412)
T 1ajs_A 81 TCASRLALGDDSPALQEKR---VGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNG--------VFTT 149 (412)
T ss_dssp HHHHHHHHCTTCHHHHTTC---EEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHH--------HHHH
T ss_pred HHHHHHHhcCCCCccCCCc---EEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHH--------HHHH
Confidence 5444443322222 3321 233 556778999885 3557899 999999987765421 2345
Q ss_pred Ccce-EEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC--CCC---CHHHHHHHHHHcCcEEEEecccccc
Q 016668 220 TSIY-FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP--RDF---DYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 220 ~g~~-~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~--~~~---dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
.|.. +..+++.. ++++.+|++++++.+++. ++++|++..++|| ... ++++|+++|+++|++||+|++| .+
T Consensus 150 ~g~~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y-~~ 227 (412)
T 1ajs_A 150 AGFKDIRSYRYWD-TEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAY-QG 227 (412)
T ss_dssp TTCSCEEEEECEE-TTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TT
T ss_pred cCCceeEEEeeec-CCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccc-cc
Confidence 5665 55555321 135679999999998754 4457777777776 333 4678999999999999999997 34
Q ss_pred ccccC---ccc--CCCC-CCc--EEEECCCccC--ccccEEEEEE
Q 016668 292 LVAAS---VVA--DPFK-YCD--VVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 292 li~~g---~~~--~p~~-gaD--iv~~S~hK~l--~GprgG~I~~ 326 (385)
+...+ ... ..+. ..| +++.|+||++ .|.|.|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 272 (412)
T 1ajs_A 228 FASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTV 272 (412)
T ss_dssp TTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEE
T ss_pred ccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEE
Confidence 44332 111 1121 223 7899999987 3677899998
No 182
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.64 E-value=7.9e-15 Score=144.22 Aligned_cols=221 Identities=11% Similarity=0.023 Sum_probs=139.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccC--
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP-- 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~p-- 191 (385)
.+|.|.+++...+.. +..+ ... + ..+...+ .++++++++|.+. .+.++||++|+..++..+..+
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~--~~~-~-~~~~~~~----l~~~la~~~g~~~-----v~~~~~gt~a~~~al~~~~~~~~ 118 (392)
T 3ruy_A 53 RHPKIINALIDQANR-VTLT--SRA-F-HSDQLGP----WYEKVAKLTNKEM-----VLPMNTGAEAVETAIKTARRWAY 118 (392)
T ss_dssp TCHHHHHHHHHHHTT-CSCC--CTT-S-EETTHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccc--ccc-c-CCHHHHH----HHHHHHHhcCCCE-----EEEeCcHHHHHHHHHHHHHHhhh
Confidence 578999998877643 3221 111 1 2232333 4557888998443 466778899999999877654
Q ss_pred --------CCEEeecCCCCCccccCCccccccccccCcc----------eEEEEeccccCCCCCCCHHHHHHHhhhcCCc
Q 016668 192 --------HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI----------YFESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (385)
Q Consensus 192 --------GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~----------~~~~i~~~~~~~~~~iD~d~le~~i~~~~pk 253 (385)
||+|++.++.|.|.... .....+. ......++ ..|+++|++.++ .+++
T Consensus 119 ~~~~~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~-~~~~ 184 (392)
T 3ruy_A 119 DVKKVEANRAEIIVCEDNFHGRTMG-------AVSMSSNEEYKRGFGPMLPGIIVIP------YGDLEALKAAIT-PNTA 184 (392)
T ss_dssp HTSCCCTTCCEEEEETTCCCCSSHH-------HHHTCSCTTTTTTCCSCCSSEEEEC------TTCHHHHHHHCC-TTEE
T ss_pred hccCCCCCCcEEEEEcCCcCCCCHh-------hhhccCChhhccccCCCCCCCeeeC------cccHHHHHHHhc-cCeE
Confidence 78999998876443210 0001000 00111111 238999999996 4789
Q ss_pred EEEEcCCCCC--CCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCcc--ccEE
Q 016668 254 LIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PRGG 322 (385)
Q Consensus 254 lIi~~~s~~~--~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~G--prgG 322 (385)
+|++.+++++ ...+ +++|.++|+++|++|++|++|. |+...|... ...+ ..|++++| |+++| .++|
T Consensus 185 ~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG~~~~G 261 (392)
T 3ruy_A 185 AFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQT-GLGRTGKVFACDWDNVTPDMYILG--KALGGGVFPIS 261 (392)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSCCE
T ss_pred EEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechh-CCCccccchhhhccCCCCCEEEEc--hhhhCChhhhE
Confidence 9999777654 5566 9999999999999999999994 554333211 1112 46777664 99977 7899
Q ss_pred EEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++++++ ++.+.+........+ +++...+++...+++.+..++.
T Consensus 262 ~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~ 304 (392)
T 3ruy_A 262 CAAANR------DILGVFEPGSHGSTF-GGNPLACAVSIAALEVLEEEKL 304 (392)
T ss_dssp EEEECH------HHHTTCCTTSSCCSS-TTCHHHHHHHHHHHHHHHHTTH
T ss_pred EEEECH------HHHhhhccCCcCCCC-CCCHHHHHHHHHHHHHHHhhhH
Confidence 999987 566666544333333 4555666666777776543333
No 183
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.63 E-value=2.5e-15 Score=154.18 Aligned_cols=214 Identities=14% Similarity=0.056 Sum_probs=135.0
Q ss_pred cccccCCCCCcHHHHHHHhhHhhccC---CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceeecCC-cHH
Q 016668 105 LELIASENFTSRAVMEAVGSCLTNKY---SEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLS-GSP 179 (385)
Q Consensus 105 l~Liasen~~s~~V~~al~s~l~~~y---~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg-~~~~~~~~~V~~~s-Gs~ 179 (385)
-.++.++.+ |..+.+++...+.... ..+|+. ..|.+ ++++.+++++.+.+| .+.+ . .+|.+++ +++
T Consensus 94 p~~~~~~~~-P~~~~~~~~~~l~~~~~~~~~~Y~~---~~G~~---~lr~~ia~~~~~~~gG~~~~-~-~~i~~t~G~~~ 164 (498)
T 3ihj_A 94 PNLLDSPSF-PEDAKKRARRILQACGGNSLGSYSA---SQGVN---CIREDVAAYITRRDGGVPAD-P-DNIYLTTGASD 164 (498)
T ss_dssp GGGGGCSSS-CHHHHHHHHHHHHHC-------------CCSCH---HHHHHHHHHHHHHTTTCCCC-G-GGEEEESSHHH
T ss_pred ccccCcccC-CHHHHHHHHHHHHhccCCCCCCCCC---CCCHH---HHHHHHHHHHHHhcCCCCCC-c-ccEEEcCCHHH
Confidence 344444444 4555555555554321 123443 23544 677777788888885 5321 1 1344444 556
Q ss_pred HHHHHHHHhccCCC----EEeecCCCCCccccCCccccccccccCcceEEEEeccccCC-CCCCCHHHHHHHhhhc----
Q 016668 180 ANFEVYTAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDES-TGLVDYDMLEKTAILF---- 250 (385)
Q Consensus 180 A~~~a~~all~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~-~~~iD~d~le~~i~~~---- 250 (385)
|+..++.+++++|| +|++.+|.|.++.. .+...|.. .++|+++++ ++.+|+++|++.+++.
T Consensus 165 ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~--------~~~~~g~~--~v~~~~~~~~~~~~d~~~le~~l~~~~~~~ 234 (498)
T 3ihj_A 165 GISTILKILVSGGGKSRTGVMIPIPQYPLYSA--------VISELDAI--QVNYYLDEENCWALNVNELRRAVQEAKDHC 234 (498)
T ss_dssp HHHHHHHHHCCCCGGGSEEEEEEESCCTHHHH--------HHHHTTCE--EEEEECBGGGTTBCCHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHcCCCCCCCCEEEEeCCCchhHHH--------HHHHcCCE--EEEeeccccccCCCCHHHHHHHHHhhhccC
Confidence 99999999999986 99999987755421 34456664 444445544 4589999999998763
Q ss_pred CCcEEEEcCCCCCC--CC---CHHHHHHHHHHcCcEEEEeccccccccccCc-ccCCCC------------CCc-EEEEC
Q 016668 251 RPKLIIAGASAYPR--DF---DYPRMRQIADAVGALLMMDMAHISGLVAASV-VADPFK------------YCD-VVTTT 311 (385)
Q Consensus 251 ~pklIi~~~s~~~~--~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~~p~~------------gaD-iv~~S 311 (385)
++|+|++..++||+ .. ++++|+++|+++|++|++|++|. .+++.+. ...++. ... +++.|
T Consensus 235 ~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S 313 (498)
T 3ihj_A 235 DPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQ-DNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHS 313 (498)
T ss_dssp EEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT-TCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEE
T ss_pred CCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcc-ccccCCCCCcCCHHHHHHHhcccccCceeEEEEec
Confidence 47888887777763 33 37789999999999999999984 4443321 111221 112 57889
Q ss_pred CCccC---ccccEEEEEE--eCCCCchhHHHHHHhhc
Q 016668 312 THKSL---RGPRGGMIFF--KKDPVLGVELESAINNA 343 (385)
Q Consensus 312 ~hK~l---~GprgG~I~~--~~~~~~~~~~~~~i~~~ 343 (385)
+||++ +|.|+|+++. .++ ++.+.+...
T Consensus 314 ~SK~~~G~~G~R~G~~~~~~~~~-----~l~~~l~~~ 345 (498)
T 3ihj_A 314 TSKGYMGECGYRGGYMEVINLHP-----EIKGQLVKL 345 (498)
T ss_dssp SSSSTTCCSSSCCEEEEEESCCH-----HHHHHHHHH
T ss_pred cccccccCcccceEEEEEecCCH-----HHHHHHHHH
Confidence 99998 5889999984 232 566666543
No 184
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.63 E-value=2.7e-14 Score=142.54 Aligned_cols=242 Identities=15% Similarity=0.047 Sum_probs=140.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc---c
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---K 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---~ 190 (385)
.+|.|++++...+..... ++..+| ..+...+ .+++++++++.+.+ -.+++++|++|+..++.++. +
T Consensus 60 ~~p~v~~a~~~~~~~~~~--~~~~~~--~~~~~~~----l~~~la~~~~~~~~---~v~~~~ggtea~~~ai~~~~~~~~ 128 (429)
T 1s0a_A 60 NHPQLNAAMKSQIDAMSH--VMFGGI--THAPAIE----LCRKLVAMTPQPLE---CVFLADSGSVAVEVAMKMALQYWQ 128 (429)
T ss_dssp SCHHHHHHHHHHHHHCSC--CCCSSE--ECHHHHH----HHHHHHHHSCTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--cccccc--CCHHHHH----HHHHHHHhCCCCCC---EEEEeCCHHHHHHHHHHHHHHHhc
Confidence 589999999887754321 211111 1222222 34468899987653 13556678889999987653 3
Q ss_pred ----CCCEEeecCCCCCccccCCc-ccc-----ccccccCcceEEEEecccc---CCCCCCCHHHHHHHhhh--cCCcEE
Q 016668 191 ----PHDRIMGLDLPHGGHLSHGF-MTP-----KRRVSGTSIYFESMPYRLD---ESTGLVDYDMLEKTAIL--FRPKLI 255 (385)
Q Consensus 191 ----pGD~Vl~~~~~~ggh~s~~~-~~~-----~~~~~~~g~~~~~i~~~~~---~~~~~iD~d~le~~i~~--~~pklI 255 (385)
|||+|++.++.+.+...... ... ..........+..++++.+ ...+.+|+++|++.+++ .++++|
T Consensus 129 ~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v 208 (429)
T 1s0a_A 129 AKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAV 208 (429)
T ss_dssp HHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEE
T ss_pred ccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEE
Confidence 79999999876543211000 000 0000000012344454321 11235899999998864 356778
Q ss_pred EEcCC-CC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCcc--ccEEE
Q 016668 256 IAGAS-AY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLRG--PRGGM 323 (385)
Q Consensus 256 i~~~s-~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~G--prgG~ 323 (385)
++++. ++ |...+ +++|+++|+++|++||+|++|. |+...|.. . ..++ ..|+++ ++|+|.| .+.|+
T Consensus 209 i~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~-~~g~~g~~~~~~~~~~~~d~~t--~sK~l~~G~~~iG~ 285 (429)
T 1s0a_A 209 IIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIAT-GFGRTGKLFACEHAEIAPDILC--LGKALTGGTMTLSA 285 (429)
T ss_dssp EECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEE--ECGGGGTSSSCCEE
T ss_pred EEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhh-CCcccchHHHhhhcCCCCCEEE--ecccccCCCccceE
Confidence 87765 44 43444 9999999999999999999994 43222221 1 1122 467775 5599865 57799
Q ss_pred EEEeCCCCchhHHHHHHhhcc---C-CCccCCChHHHHHHHHHHHHHhhCchHHHH
Q 016668 324 IFFKKDPVLGVELESAINNAV---F-PGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (385)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~---f-p~~qg~p~~~~iaala~Al~e~~~~~~~~y 375 (385)
+++++ ++.+.+.... + ....-+++...+++..++++.+.++++.++
T Consensus 286 ~~~~~------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~ 335 (429)
T 1s0a_A 286 TLTTR------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQ 335 (429)
T ss_dssp EEECH------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHH
T ss_pred EEeCH------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 99877 5777775431 1 111123455666676778877666555433
No 185
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.63 E-value=9.4e-15 Score=151.15 Aligned_cols=194 Identities=14% Similarity=0.097 Sum_probs=128.2
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC--CCCCCCcceeecCC-cHHHHHHHHHH----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN--LDENKWGVNVQPLS-GSPANFEVYTA---- 187 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg--~~~~~~~~~V~~~s-Gs~A~~~a~~a---- 187 (385)
++.+++++...+.. .+|+.. ..|.+ ++++.+++++.+.++ ...... .+|.+++ |++|+..++.+
T Consensus 117 ~~~~v~a~~~~~~~---~~y~~~--~~g~~---~lr~~ia~~l~~~~~~~~~~~~~-~~i~~t~G~t~al~~~~~~l~~~ 187 (533)
T 3f6t_A 117 RDKVVAEWVNGAVA---NNYPVP--DRCLV---NTEKIINYFLQELSYKDANLAEQ-TDLFPTEGGTAAIVYAFHSLAEN 187 (533)
T ss_dssp HHHHHHHHHHHHHT---CSCCSS--SSCCH---HHHHHHHHHHHHHHTTTCCCGGG-EEEEEEEHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHh---CCCCCC--cccHH---HHHHHHHHHHHHhcCCCCCCCCc-ceEEEECCHHHHHHHHHHHhhhh
Confidence 56666666555432 133311 12444 677777777766633 332111 1344555 55699999888
Q ss_pred -hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEecccc-CCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--
Q 016668 188 -ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLD-ESTGLVDYDMLEKTAILFRPKLIIAGASAYP-- 263 (385)
Q Consensus 188 -ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~-~~~~~iD~d~le~~i~~~~pklIi~~~s~~~-- 263 (385)
+++|||+|++.+|.|.++.. .+...|..+..++++.+ .+++.+|+++|++.++. ++|+|++..++||
T Consensus 188 ~l~~~gd~Viv~~p~~~~~~~--------~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~-~~k~v~l~~p~NPtG 258 (533)
T 3f6t_A 188 HLLKKGDKIAINEPIFTPYLR--------IPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDP-SIKALIVVNPTNPTS 258 (533)
T ss_dssp TSSCTTCEEEEESSCCHHHHT--------SGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCT-TEEEEEEESSCTTTC
T ss_pred hccCCcCEEEEcCCCcHHHHH--------HHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCC-CCeEEEEeCCCCCCc
Confidence 78999999999998765532 23455666666664432 23568999999999864 7899888777765
Q ss_pred CCCCH---HHHHHHHH-HcCcEEEEeccccccccccCcccCCCC---CCcEEEECCCccC--ccccEEEEEEeCC
Q 016668 264 RDFDY---PRMRQIAD-AVGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 264 ~~~dl---~~I~~ia~-~~ga~livD~ah~~Gli~~g~~~~p~~---gaDiv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
...+. ++|.++|+ ++|+++|+|++|. ++.... +.... +.++++.|+||++ +|+|.|+++++++
T Consensus 259 ~~~~~~~l~~l~~la~~~~~~~li~De~y~-~~~~~~--~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~ 330 (533)
T 3f6t_A 259 KEFDTNALNAIKQAVEKNPKLMIISDEVYG-AFVPNF--KSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEK 330 (533)
T ss_dssp BCCCHHHHHHHHHHHHHCTTCEEEEECTTG-GGSTTC--CCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESS
T ss_pred cccCHHHHHHHHHHHHhCCCCEEEEcCCcc-ccccCc--cCHhhcCCCCEEEEecCcccCCCcccceEEEEECcH
Confidence 45554 47888888 6899999999985 444321 11111 2348899999997 6888999999886
No 186
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.62 E-value=9.3e-15 Score=147.29 Aligned_cols=221 Identities=14% Similarity=0.100 Sum_probs=135.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.. +.. .... + ..+...++ ++++++++|.+. .++++||++|+..++.++.
T Consensus 93 ~~p~v~~Ai~~~~~~-~~~--~~~~-~-~~~~~~~l----~~~la~~~g~~~-----v~~~~sGseA~~~al~~~~~~~~ 158 (439)
T 2oat_A 93 CHPKIVNALKSQVDK-LTL--TSRA-F-YNNVLGEY----EEYITKLFNYHK-----VLPMNTGVEAGETACKLARKWGY 158 (439)
T ss_dssp TCHHHHHHHHHHHTT-CSC--CCTT-S-EESSHHHH----HHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cCc--ccCc-c-CCHHHHHH----HHHHHHhcCCCE-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 689999999887643 221 1111 2 12222333 456778888543 3567789999999998764
Q ss_pred -----cCC-CEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCCCCCCCHHHHHHHhhhcC
Q 016668 190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDESTGLVDYDMLEKTAILFR 251 (385)
Q Consensus 190 -----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~~~~iD~d~le~~i~~~~ 251 (385)
+|| |+|++.++.+.|... ..+...| ..+..++ . .|+++|++.++..+
T Consensus 159 ~~~g~~~g~~~vi~~~~~yhg~~~-------~~~~~~g~~~~~~~~~p~~~~v~~~~--~------~d~~~le~~l~~~~ 223 (439)
T 2oat_A 159 TVKGIQKYKAKIVFAAGNFWGRTL-------SAISSSTDPTSYDGFGPFMPGFDIIP--Y------NDLPALERALQDPN 223 (439)
T ss_dssp HTTCCCTTCCEEEEETTCCCCSSH-------HHHTTCCCHHHHTTSCSCCTTEEEEC--S------SCHHHHHHHTTSTT
T ss_pred hccCCCCCCCeEEEEcCCCCCCCH-------hHhhcCCChhcccCCCCCCCCeEEeC--C------CCHHHHHHHhCCCC
Confidence 467 899998876533211 0111222 1222222 1 38999999985336
Q ss_pred CcEEEEcCCC--CCCCC----CHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCcc--cc
Q 016668 252 PKLIIAGASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG--PR 320 (385)
Q Consensus 252 pklIi~~~s~--~~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~G--pr 320 (385)
+++|++++.+ .|... ++++|+++|+++|++||+|++| .|+...|... ..+. ..|++ |++|+|.| .+
T Consensus 224 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~G~~~ 300 (439)
T 2oat_A 224 VAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQ-TGLARTGRWLAVDYENVRPDIV--LLGKALSGGLYP 300 (439)
T ss_dssp EEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSC
T ss_pred EEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc-cCCccCCcchhHHHhCCCCcEE--EecccccCCCCC
Confidence 7788886542 23333 7999999999999999999999 5654333211 1122 46876 66799854 58
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
+|++++++ ++.+.+.........+ .+....++...+++.+.++++.
T Consensus 301 ~G~v~~~~------~~~~~l~~~~~~~t~~-~~~~~~aaa~aal~~~~~~~~~ 346 (439)
T 2oat_A 301 VSAVLCDD------DIMLTIKPGEHGSTYG-GNPLGCRVAIAALEVLEEENLA 346 (439)
T ss_dssp CEEEEECH------HHHTTSCTTSSCCSST-TCHHHHHHHHHHHHHHHHTTHH
T ss_pred eEEEEECH------HHHhccCCCCcccCCC-cCHHHHHHHHHHHHHHhhhhHH
Confidence 99999987 5666554432223333 3344455555677766544443
No 187
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.62 E-value=1e-15 Score=154.84 Aligned_cols=192 Identities=9% Similarity=0.029 Sum_probs=130.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccC----CCEEeecCCCCCccccCCcccccccc
Q 016668 142 GNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP----HDRIMGLDLPHGGHLSHGFMTPKRRV 217 (385)
Q Consensus 142 G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~p----GD~Vl~~~~~~ggh~s~~~~~~~~~~ 217 (385)
|.+..-.+|+....|+.+++|++.. . ..++++++|.++.++..+.+++ ||.|+++.- .|.|. .+.+
T Consensus 92 ~~~~~~~~e~~~~~~~~~~lGlp~~-~-~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~---aHkSv-----~kAl 161 (450)
T 3bc8_A 92 GSSLLNKITNSLVLNVIKLAGVHSV-A-SCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRI---DQKSC-----FKSM 161 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTC-C-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECC---CCHHH-----HHHH
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCC-c-eEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECC---cHHHH-----HHHH
Confidence 3444557888889999999999864 2 2244455554545455555443 899988754 44432 1456
Q ss_pred ccCcceEEEEeccccCCCCCCCHHHHHHHhhhcC---CcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccc
Q 016668 218 SGTSIYFESMPYRLDESTGLVDYDMLEKTAILFR---PKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGL 292 (385)
Q Consensus 218 ~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~---pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (385)
.+.|.....++...+++.+.+|++.|++++++++ +-+|++..+.++ ...|+++|+++|+++|+++++|+||+..+
T Consensus 162 ~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~ 241 (450)
T 3bc8_A 162 VTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQS 241 (450)
T ss_dssp HHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTC
T ss_pred HHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhh
Confidence 7788876666544444567899999999997643 234555566666 57899999999999999999999997654
Q ss_pred cccCccc-CCC--CCCcEEEECCCccCccccE-EEEEEeCCCCchhHHHHHHhhccCCCcc
Q 016668 293 VAASVVA-DPF--KYCDVVTTTTHKSLRGPRG-GMIFFKKDPVLGVELESAINNAVFPGLQ 349 (385)
Q Consensus 293 i~~g~~~-~p~--~gaDiv~~S~hK~l~Gprg-G~I~~~~~~~~~~~~~~~i~~~~fp~~q 349 (385)
.....++ ..+ +++|+++.|+|||+..|-+ ++++.+++ ++.+++.. .+++.+
T Consensus 242 ~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~-----~~~~~~~~-~~~g~~ 296 (450)
T 3bc8_A 242 SKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNE-----PFIQDISK-MYPGRA 296 (450)
T ss_dssp HHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCH-----HHHHHHHH-HSCSCB
T ss_pred hhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEecCH-----HHHHHHHH-HhhcCC
Confidence 3321122 334 4799999999999988854 66666654 55566643 455544
No 188
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.62 E-value=4.2e-15 Score=146.10 Aligned_cols=191 Identities=17% Similarity=0.228 Sum_probs=121.3
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCC--CCCCCcceee---cCCcHHHHHHHHHH
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNL--DENKWGVNVQ---PLSGSPANFEVYTA 187 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~--~~~~~~~~V~---~~sGs~A~~~a~~a 187 (385)
++++.|.+++...+.+....+|+. ..|.+ ++++..++++. +. +.+ +|. +.+|+.|+..++.+
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~---~lr~~la~~~~---~~~~~~~----~v~~~~~~g~~~a~~~~~~~ 110 (394)
T 2ay1_A 44 PIMRAVHAAEQRMLETETTKTYAG---LSGEP---EFQKAMGELIL---GDGLKSE----TTATLATVGGTGALRQALEL 110 (394)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCC---SSCCH---HHHHHHHHHHH---GGGCCGG----GEEEEEEEHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhcCCcccCCCCC---CCCcH---HHHHHHHHHHh---CCCCCcc----cEEEEecCCchhHHHHHHHH
Confidence 457999999987664322234433 12333 55554433332 43 332 233 56677899999887
Q ss_pred hc--cCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCC
Q 016668 188 IL--KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYP 263 (385)
Q Consensus 188 ll--~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~ 263 (385)
+. .|||+|++.+|.|.++.. .+...|..+..++++.. +++.+|++++++.+++. +++++++..++||
T Consensus 111 ~~~~~~gd~vl~~~p~~~~~~~--------~~~~~g~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~np 181 (394)
T 2ay1_A 111 ARMANPDLRVFVSDPTWPNHVS--------IMNFMGLPVQTYRYFDA-ETRGVDFEGMKADLAAAKKGDMVLLHGCCHNP 181 (394)
T ss_dssp HHHHCTTCCEEEEESCCHHHHH--------HHHHHTCCEEEEECEET-TTTEECHHHHHHHHHTCCTTCEEEEESSSCTT
T ss_pred HHhcCCCCEEEEcCCCChhHHH--------HHHHcCCceEEEecccc-cCCccCHHHHHHHHHhCCCCCEEEEeCCCCCC
Confidence 74 499999999887655321 23345665555553211 35679999999998653 2456676777766
Q ss_pred --CCC---CHHHHHHHHHHcCcEEEEeccccccccccC---ccc-CCCC--CCc-EEEECCCccC--ccccEEEEEE
Q 016668 264 --RDF---DYPRMRQIADAVGALLMMDMAHISGLVAAS---VVA-DPFK--YCD-VVTTTTHKSL--RGPRGGMIFF 326 (385)
Q Consensus 264 --~~~---dl~~I~~ia~~~ga~livD~ah~~Gli~~g---~~~-~p~~--gaD-iv~~S~hK~l--~GprgG~I~~ 326 (385)
... ++++|.++|+++|+++|+|++|. ++..++ ..+ ..+. +.| +++.|+||++ +|.|.|++++
T Consensus 182 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~ 257 (394)
T 2ay1_A 182 TGANLTLDQWAEIASILEKTGALPLIDLAYQ-GFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLA 257 (394)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEEECCT-TSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEecCcc-ccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEE
Confidence 344 36788999999999999999984 333221 101 1122 334 6789999998 4778899987
No 189
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.62 E-value=5e-15 Score=149.18 Aligned_cols=226 Identities=16% Similarity=0.220 Sum_probs=134.6
Q ss_pred HHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc----C
Q 016668 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK----P 191 (385)
Q Consensus 116 ~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~----p 191 (385)
+.|.+++...+.... . .|...+...+++ +++++++|.+. .++++||++|+..++.++++ |
T Consensus 55 ~~v~~a~~~~~~~~~-~------~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~ggt~A~~~al~~~~~~~~~~ 118 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-E------AYAGSRNYYDLK----DKAKELFNYDY-----IIPAHQGRGAENILFPVLLKYKQKE 118 (467)
T ss_dssp CCEEHHHHHHHHTCC-C------CSSSCHHHHHHH----HHHHHHHCCCE-----EEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhcc-c------ccccCccHHHHH----HHHHHHcCCCc-----EEEcCCcHHHHHHHHHHHHHhhccC
Confidence 566666655543211 1 133334444554 46788888753 35667789999999999988 9
Q ss_pred CCE---EeecCCCCCccccCCccccccccccCcceEEEEecc--ccC-----CCCCCCHHHHHHHhhhc---CCcEEEEc
Q 016668 192 HDR---IMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYR--LDE-----STGLVDYDMLEKTAILF---RPKLIIAG 258 (385)
Q Consensus 192 GD~---Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~--~~~-----~~~~iD~d~le~~i~~~---~pklIi~~ 258 (385)
||+ |++..+.++... ..+...|..+...+.. ++. .++.+|+++|++.+++. ++++|+++
T Consensus 119 Gd~~~~viv~~~~~~~~~--------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~ 190 (467)
T 1ax4_A 119 GKAKNPVFISNFHFDTTA--------AHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVST 190 (467)
T ss_dssp TCCSSCEEEESSCCHHHH--------HHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEE
T ss_pred CCccceEEEeccccchhh--------HHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEe
Confidence 998 887632111111 1233445433322211 111 14579999999999752 57899887
Q ss_pred CCCCCC---CC---CHHHHHHHHHHcCcEEEEeccccc-ccc--------ccCcccCCC-----CCCcEEEECCCccCcc
Q 016668 259 ASAYPR---DF---DYPRMRQIADAVGALLMMDMAHIS-GLV--------AASVVADPF-----KYCDVVTTTTHKSLRG 318 (385)
Q Consensus 259 ~s~~~~---~~---dl~~I~~ia~~~ga~livD~ah~~-Gli--------~~g~~~~p~-----~gaDiv~~S~hK~l~G 318 (385)
+++++. .. ++++|+++|+++|++||+|++|.. |.. ..+.....+ .++|++++|+||++..
T Consensus 191 ~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~ 270 (467)
T 1ax4_A 191 VTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLL 270 (467)
T ss_dssp SSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCC
T ss_pred ccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEEeccccCCC
Confidence 766543 33 478999999999999999999765 221 112100001 2478899999999865
Q ss_pred ccEEEEEEeCCCCchhHHHHHHhhcc--CCC--ccCCChHHHHHHHHHHHHHhhC
Q 016668 319 PRGGMIFFKKDPVLGVELESAINNAV--FPG--LQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 319 prgG~I~~~~~~~~~~~~~~~i~~~~--fp~--~qg~p~~~~iaala~Al~e~~~ 369 (385)
|.||+++++++. ++.+++.... +.+ ..++.....+++++.+++++..
T Consensus 271 ~~Gg~~~~~d~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 321 (467)
T 1ax4_A 271 NIGGLVAIRDNE----EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE 321 (467)
T ss_dssp SSCEEEEESSCH----HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC
T ss_pred CcceEEEeCCHH----HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh
Confidence 668888887320 1333332111 111 2234444556666667776654
No 190
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.61 E-value=2.4e-15 Score=149.60 Aligned_cols=231 Identities=13% Similarity=0.043 Sum_probs=143.5
Q ss_pred hhcccCChHHHHHHHHHHHHhhhccccccCCCC-----CcHHHHHHHh--hHhhcc-CCCCCCCCCCCCCcHHHHHHHHH
Q 016668 81 YSLGEADPEVCEIITKEKERQFKSLELIASENF-----TSRAVMEAVG--SCLTNK-YSEGLPGKRYYGGNEYIDELETL 152 (385)
Q Consensus 81 ~~l~~~dp~~~~~i~~e~~~~~~~l~Liasen~-----~s~~V~~al~--s~l~~~-y~~g~p~~r~~~G~~~~~~le~~ 152 (385)
.+++++.+.++..+.+...+ ...++|-.+..- +++.+++++. ..+.+. ...+||+. ..|.+ +++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~--~~g~~---~lr-- 76 (423)
T 3ez1_A 5 EASRPALDLARQAYEAFKAR-GLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMDGLDLRNYPGG--VAGLP---SAR-- 76 (423)
T ss_dssp -CCHHHHHHHHHHHHHHHHH-TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEETTEETTSSCSC--TTCCH---HHH--
T ss_pred HHHHHHHHHHHHHHHHhhcC-CceEecCCCCCChHhCCCcHHHHHHHhhhHHhhcchhhhCCCCC--CCChH---HHH--
Confidence 35666777888777665443 244566533222 4556777764 332211 11234221 12333 444
Q ss_pred HHHHHHHHcCCCCCCCcceeecCCc-HHHHH--HHHHHhcc--C---------CCEEeecCCCCCccccCCccccccccc
Q 016668 153 CQKRALAAFNLDENKWGVNVQPLSG-SPANF--EVYTAILK--P---------HDRIMGLDLPHGGHLSHGFMTPKRRVS 218 (385)
Q Consensus 153 ~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~--~a~~all~--p---------GD~Vl~~~~~~ggh~s~~~~~~~~~~~ 218 (385)
+.++++++++.+ +|.+++| ++|+. .++.++++ | ||+|++.+|.|.++.. .+.
T Consensus 77 --~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~--------~~~ 142 (423)
T 3ez1_A 77 --ALFAGYLDVKAE----NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFL--------LLQ 142 (423)
T ss_dssp --HHHHHHTTSCGG----GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHH--------HHH
T ss_pred --HHHHHHhCCChh----hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHH--------HHH
Confidence 457788898864 3455555 56887 78888888 8 5999999987654421 234
Q ss_pred cCcceEEEEeccccCCCCCCCHHHHHHHhh-hcCCcEEEEc-CCCCC--CCCCHH---HHHHHH-HHcCcEEEEeccccc
Q 016668 219 GTSIYFESMPYRLDESTGLVDYDMLEKTAI-LFRPKLIIAG-ASAYP--RDFDYP---RMRQIA-DAVGALLMMDMAHIS 290 (385)
Q Consensus 219 ~~g~~~~~i~~~~~~~~~~iD~d~le~~i~-~~~pklIi~~-~s~~~--~~~dl~---~I~~ia-~~~ga~livD~ah~~ 290 (385)
..|..+..++ ++++ .+|+++|++.++ ..++|+|++. .++|| ...+.+ +|.++| +++|+++|+|++|..
T Consensus 143 ~~g~~~~~v~--~~~~--g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 143 TLGFELLTVD--MQSD--GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp HHTCEEEEEE--EETT--EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred HcCCEEEecc--CCCC--CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 5566544444 5532 399999999985 3468888754 45555 556655 888888 899999999999853
Q ss_pred ccccc-Cc--ccCCC------C--CCcEEEECCCcc-CccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 291 GLVAA-SV--VADPF------K--YCDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 291 Gli~~-g~--~~~p~------~--gaDiv~~S~hK~-l~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
..... +. ..+.+ + +.++++.|+||+ ++|+|.|+++.++ ++.+.+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~------~~~~~~~~~ 277 (423)
T 3ez1_A 219 HHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSE------DNIRWLSKY 277 (423)
T ss_dssp CBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECH------HHHHHHHHH
T ss_pred hhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCH------HHHHHHHHH
Confidence 22222 11 11111 1 345889999996 4788999999987 566666544
No 191
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.61 E-value=2e-14 Score=144.44 Aligned_cols=222 Identities=13% Similarity=0.081 Sum_probs=131.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.. +. +.. +.+ ..+...+ .++++++++|.+. .++++||++|+..++.++.
T Consensus 82 ~~p~v~~ai~~~~~~-~~--~~~-~~~-~~~~~~~----l~~~la~~~g~~~-----v~~~~sGseA~~~al~~a~~~~~ 147 (433)
T 1z7d_A 82 CHPNILNAMINQAKN-LT--ICS-RAF-FSVPLGI----CERYLTNLLGYDK-----VLMMNTGAEANETAYKLCRKWGY 147 (433)
T ss_dssp TCHHHHHHHHHHHTT-CS--CCC-TTS-EEHHHHH----HHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-CC--Ccc-CCc-CCHHHHH----HHHHHHhhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 679999999887643 22 111 112 2332333 3456788888543 3567789999999988753
Q ss_pred -----cCC-CEEeecCCCCCccccCCccccccccccCcce----------EEEEeccccCCCCCCCHHHHHHHhhhcCCc
Q 016668 190 -----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY----------FESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (385)
Q Consensus 190 -----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~----------~~~i~~~~~~~~~~iD~d~le~~i~~~~pk 253 (385)
+|| |+|++.++.+.|.... .+...+.. ..+..++ ..|+++|++.++..+++
T Consensus 148 ~~~g~~~gr~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~p~~~~v~~~~------~~d~~~le~~l~~~~~~ 214 (433)
T 1z7d_A 148 EVKKIPENMAKIVVCKNNFSGRTLG-------CISASTTKKCTSNFGPFAPQFSKVP------YDDLEALEEELKDPNVC 214 (433)
T ss_dssp HTSCCCTTCCEEEEETTC---------------------------------CEEEEC------TTCHHHHHHHHTSTTEE
T ss_pred hccCCCCCCCeEEEEeCCcCCcchh-------hhcccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCCEE
Confidence 478 9999998765432110 11122210 0111211 14899999998434678
Q ss_pred EEEEcCCC--CCCCC----CHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-c-ccEE
Q 016668 254 LIIAGASA--YPRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-G-PRGG 322 (385)
Q Consensus 254 lIi~~~s~--~~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-G-prgG 322 (385)
+|++++.+ .|... ++++|+++|+++|++||+|++|. |+...|... ..+. ..|++ |++|+|. | .++|
T Consensus 215 ~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G~~~~G 291 (433)
T 1z7d_A 215 AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQT-GLGRTGKLLCVHHYNVKPDVI--LLGKALSGGHYPIS 291 (433)
T ss_dssp EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSCCE
T ss_pred EEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCcc-CCCcCCcchhhHhcCCCCCEE--EECccccCCCCCeE
Confidence 88887542 23332 79999999999999999999994 654333211 1122 46876 5679985 4 5889
Q ss_pred EEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 323 MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++++++ ++.+.+......... +.+....++...+|+.+.++++
T Consensus 292 ~v~~~~------~~~~~l~~~~~~~t~-~~~~~~~aaa~aal~~~~~~~~ 334 (433)
T 1z7d_A 292 AVLAND------DIMLVIKPGEHGSTY-GGNPLAASICVEALNVLINEKL 334 (433)
T ss_dssp EEEECH------HHHTTCCTTCCCCTT-TTCHHHHHHHHHHHHHHHHTTH
T ss_pred EEEECH------HHHhhhccccccccC-CCCHHHHHHHHHHHHHHHhccH
Confidence 999987 566655443222223 2344455555557766544444
No 192
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.61 E-value=5.1e-15 Score=142.85 Aligned_cols=214 Identities=15% Similarity=0.091 Sum_probs=137.6
Q ss_pred cccccCCC--CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC---CCCCCCcceeecCC-cH
Q 016668 105 LELIASEN--FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN---LDENKWGVNVQPLS-GS 178 (385)
Q Consensus 105 l~Liasen--~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg---~~~~~~~~~V~~~s-Gs 178 (385)
++|...++ .+++.|.+++...+......+|+.. +. .+++ +.++++++ ++.+ +|.+++ |+
T Consensus 22 i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----~~---~~lr----~~la~~~~~~~~~~~----~v~~~~G~~ 86 (335)
T 1uu1_A 22 TYLALNENPFPFPEDLVDEVFRRLNSDALRIYYDS----PD---EELI----EKILSYLDTDFLSKN----NVSVGNGAD 86 (335)
T ss_dssp EEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCCS----SC---HHHH----HHHHHHHTCSSCCGG----GEEEESSHH
T ss_pred eECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC----ch---HHHH----HHHHHHcCCCCCCHH----HEEEcCChH
Confidence 55655555 3589999998876632222344431 22 2444 45777888 6653 344455 56
Q ss_pred HHHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 179 PANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 179 ~A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
+|+..++.++ ||+|++. |.|.++.. .+...|..+ +.++++ +++.+|++++ .++|+|++.
T Consensus 87 ~al~~~~~~~---gd~Vl~~-p~y~~~~~--------~~~~~g~~~--~~v~~~-~~~~~d~~~l------~~~~~v~l~ 145 (335)
T 1uu1_A 87 EIIYVMMLMF---DRSVFFP-PTYSCYRI--------FAKAVGAKF--LEVPLT-KDLRIPEVNV------GEGDVVFIP 145 (335)
T ss_dssp HHHHHHHHHS---SEEEECS-SSCHHHHH--------HHHHHTCEE--EECCCC-TTSCCCCCCC------CTTEEEEEE
T ss_pred HHHHHHHHHh---CCcEEEC-CCcHHHHH--------HHHHcCCeE--EEeccC-CCCCCCHHHc------CCCCEEEEe
Confidence 7998888887 9999998 87655421 233456544 444454 2456787766 268999877
Q ss_pred CCCCC--CCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC--CCcEEEECCCccC--ccccEEEEEEeCCCCc
Q 016668 259 ASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDPVL 332 (385)
Q Consensus 259 ~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--gaDiv~~S~hK~l--~GprgG~I~~~~~~~~ 332 (385)
.++|| ...+.+++.++++.+| ++++|++|. ++.... ....++ +.+++++|+||++ +|.|.|++++++
T Consensus 146 ~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~-~~~~~~-~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~---- 218 (335)
T 1uu1_A 146 NPNNPTGHVFEREEIERILKTGA-FVALDEAYY-EFHGES-YVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE---- 218 (335)
T ss_dssp SSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTH-HHHCCC-CGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH----
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-EEEEECcch-hhcchh-HHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH----
Confidence 66665 6789999999999999 999999985 332211 111122 3568999999997 577889999976
Q ss_pred hhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 333 GVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 333 ~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++.+.+.....+. +++....++...+++.
T Consensus 219 --~~~~~l~~~~~~~---~~~~~~~~~~~~~l~~ 247 (335)
T 1uu1_A 219 --KFIDAYNRVRLPF---NVSYVSQMFAKVALDH 247 (335)
T ss_dssp --HHHHHHHHHSCTT---CSCHHHHHHHHHHHHT
T ss_pred --HHHHHHHHhcCCC---CcCHHHHHHHHHHhCC
Confidence 6777776544332 4555556666666654
No 193
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.61 E-value=2.4e-15 Score=151.51 Aligned_cols=190 Identities=16% Similarity=0.193 Sum_probs=118.4
Q ss_pred HHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccC----
Q 016668 116 RAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP---- 191 (385)
Q Consensus 116 ~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~p---- 191 (385)
+.|++++...+.. |. ..|+..+...+++ +++++++|.+. .++++|||+|+..++.+++++
T Consensus 53 ~~v~~a~~~~l~~----~~---~~y~~~~~~~~l~----~~la~~~~~~~-----v~~t~~gt~A~~~al~~~~~~~~~~ 116 (467)
T 2oqx_A 53 GAVTQSMQAAMMR----GD---EAYSGSRSYYALA----ESVKNIFGYQY-----TIPTHQGRGAEQIYIPVLIKKREQE 116 (467)
T ss_dssp SCCCHHHHHHTTS----CC---CCSSSCHHHHHHH----HHHHHHHCCSE-----EEEEC--CCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc----Cc---ceeccCchhHHHH----HHHHHHhCcCc-----EEEcCCcHHHHHHHHHHHhcccccc
Confidence 7788887766532 11 1233344444554 46788888754 356778899999999999988
Q ss_pred -C----CEEeecCCCCCccccCCccccccccccCcceEEEE----ecccc---CCCCCCCHHHHHHHhhh---cCCcEEE
Q 016668 192 -H----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESM----PYRLD---ESTGLVDYDMLEKTAIL---FRPKLII 256 (385)
Q Consensus 192 -G----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i----~~~~~---~~~~~iD~d~le~~i~~---~~pklIi 256 (385)
| |+|++. ..|+. ++. ......+...... +++.+ +.++.+|+++|++.+++ .++++|+
T Consensus 117 ~G~~~~d~Ii~~-~~h~~--t~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi 188 (467)
T 2oqx_A 117 KGLDRSKMVAFS-NYFFD--TTQ-----GHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIV 188 (467)
T ss_dssp HCCCTTTCEEEE-SSCCH--HHH-----HHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEE
T ss_pred CCCCccceEEec-ccccc--cch-----hhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEE
Confidence 9 997765 33321 000 0011122211111 11111 13467899999999974 3688998
Q ss_pred EcCCCCC---CCC---CHHHHHHHHHHcCcEEEEeccccc-cc--------cccCcccCCC-----CCCcEEEECCCccC
Q 016668 257 AGASAYP---RDF---DYPRMRQIADAVGALLMMDMAHIS-GL--------VAASVVADPF-----KYCDVVTTTTHKSL 316 (385)
Q Consensus 257 ~~~s~~~---~~~---dl~~I~~ia~~~ga~livD~ah~~-Gl--------i~~g~~~~p~-----~gaDiv~~S~hK~l 316 (385)
+++++++ ... ++++|+++|+++|++||+|++|.. +. ...|.....+ .++|++++|+||++
T Consensus 189 ~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~ 268 (467)
T 2oqx_A 189 ATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDA 268 (467)
T ss_dssp EESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTT
T ss_pred EeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEeccccc
Confidence 8776654 333 478999999999999999998866 33 1222211111 24788899999999
Q ss_pred ccccEEEEEEeCC
Q 016668 317 RGPRGGMIFFKKD 329 (385)
Q Consensus 317 ~GprgG~I~~~~~ 329 (385)
..|.||+++++++
T Consensus 269 g~~~Gg~~~~~~~ 281 (467)
T 2oqx_A 269 MVPMGGLLCMKDD 281 (467)
T ss_dssp CCSSCEEEEECSG
T ss_pred CCCCceEEEecCh
Confidence 7677888888763
No 194
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.61 E-value=9.2e-16 Score=154.37 Aligned_cols=212 Identities=13% Similarity=0.077 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccC----CCEEeecCCCCCccccCCccccccccccCcce
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKP----HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY 223 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~p----GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~ 223 (385)
.-+.++.+|++.+ |++.. + ..+.+.++|.++++++++.+++ ||+|+++.- .|.|. .+.+.+.|..
T Consensus 117 ltn~l~ld~L~~~-G~~~~-~-~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn---~HKSv-----~kAliL~Gl~ 185 (501)
T 3hl2_A 117 ITNSLVLDIIKLA-GVHTV-A-NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRI---DQKSC-----FKSMITAGFE 185 (501)
T ss_dssp HHHHHHHHHHHHT-TCTTC-C-EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECC---CCHHH-----HHHHHHTTCE
T ss_pred HHHHHHHHHHHHc-CCCCC-C-cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecc---hHHHH-----HHHHHHcCCe
Confidence 3445666777776 99863 2 2333444455888888887774 499999764 45442 1356788887
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCc--EEE-EcCCCC-C-CCCCHHHHHHHHHHcCcEEEEeccccccccccCcc
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPK--LII-AGASAY-P-RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVV 298 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pk--lIi-~~~s~~-~-~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~ 298 (385)
..+++..++++...+|+++++++++++.++ +++ ...+.| | ...|+++|+++|+++|+++++|+||+..+.+...+
T Consensus 186 Pv~V~p~~d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~l 265 (501)
T 3hl2_A 186 PVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHL 265 (501)
T ss_dssp EEEECEEEETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHH
T ss_pred EEEEeeeecccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhh
Confidence 777765555455689999999999875433 333 344455 4 44799999999999999999999998765432222
Q ss_pred c-CCCC-C-CcEEEECCCccCccccEE-EEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 299 A-DPFK-Y-CDVVTTTTHKSLRGPRGG-MIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 299 ~-~p~~-g-aDiv~~S~hK~l~GprgG-~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
+ +.++ | +|+++.|+||++..|-|| +++.+++ ++.+++. ..+|+.+++. ..+.+-.+++.+-...|++
T Consensus 266 p~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~-----e~l~~~~-~~yPGr~S~S---psldl~~tLL~lGr~Gy~~ 336 (501)
T 3hl2_A 266 IQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFND-----SFIQEIS-KMYPGRASAS---PSLDVLITLLSLGSNGYKK 336 (501)
T ss_dssp HHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCH-----HHHHHHH-HTSCSCBCSH---HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcEEEecccccceeecCceEEEeCCH-----HHHHHHH-HhCCCCCCCc---HHHHHHHHHHHHHHHHHHH
Confidence 2 3344 6 999999999999888655 5556665 6777763 4677766421 1222333444444444444
Q ss_pred HHHHH
Q 016668 375 YQNKS 379 (385)
Q Consensus 375 y~~~v 379 (385)
..++-
T Consensus 337 ll~e~ 341 (501)
T 3hl2_A 337 LLKER 341 (501)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 195
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.61 E-value=1.6e-14 Score=144.36 Aligned_cols=219 Identities=16% Similarity=0.134 Sum_probs=134.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+.. +.. .... + ..+ +....++++++++|.+. .++++||++|+..++.++.+
T Consensus 74 ~~p~v~~ai~~~~~~-~~~--~~~~-~-~~~----~~~~l~~~la~~~g~~~-----v~~~~ggteA~~~al~~~~~~~~ 139 (420)
T 2pb2_A 74 CHPALVEALKSQGET-LWH--TSNV-F-TNE----PALRLGRKLIDATFAER-----VLFMNSGTEANETAFKLARHYAC 139 (420)
T ss_dssp TCHHHHHHHHHHHTT-CCC--CCTT-S-CCH----HHHHHHHHHHHHSSCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccc--ccCc-c-CCH----HHHHHHHHHHhhCCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 479999999877643 322 1111 2 223 33334567888888543 35667889999999998865
Q ss_pred ----CCC-EEeecCCCCCccccCCccccccccccCcce------------EEEEeccccCCCCCCCHHHHHHHhhhcCCc
Q 016668 191 ----PHD-RIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLDESTGLVDYDMLEKTAILFRPK 253 (385)
Q Consensus 191 ----pGD-~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~------------~~~i~~~~~~~~~~iD~d~le~~i~~~~pk 253 (385)
+|+ +|++.++.+.+... . .+...|.. +..++ ..|+++|++.+++ +++
T Consensus 140 ~~~~~g~~~vi~~~~~yh~~~~-~------~~~~~g~~~~~~~~~p~~~~~~~~~--------~~d~~~le~~i~~-~~~ 203 (420)
T 2pb2_A 140 VRHSPFKTKIIAFHNAFHGRSL-F------TVSVGGQPKYSDGFGPKPADIIHVP--------FNDLHAVKAVMDD-HTC 203 (420)
T ss_dssp HHTCTTCCEEEEETTCCCCSSH-H------HHHHSSCHHHHTTSSSCCSCEEEEC--------TTCHHHHHHHCCT-TEE
T ss_pred hccCCCCCEEEEEeCCcCCcCH-H------HHHhcCCccccccCCCCCCCeEEec--------CCCHHHHHHHhcc-Cce
Confidence 784 89998876533211 0 11122211 22222 1389999999864 789
Q ss_pred EEEEcCCCCC--C----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEE
Q 016668 254 LIIAGASAYP--R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGM 323 (385)
Q Consensus 254 lIi~~~s~~~--~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~ 323 (385)
+|++++++++ . ..++++|+++|+++|++||+|++| .|+...|... ..++ ..|++ |++|+|. |.+.|+
T Consensus 204 ~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~-~g~~~~g~~~~~~~~~~~~dii--t~sK~l~~G~~iG~ 280 (420)
T 2pb2_A 204 AVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQ-CGMGRTGDLFAYMHYGVTPDIL--TSAKALGGGFPVSA 280 (420)
T ss_dssp EEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEE
T ss_pred EEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCC-cCcccCCcHHHHHhcCCCCCeE--EecccccCCCceEE
Confidence 9988765432 1 246899999999999999999999 5764434211 1122 46877 4579984 567888
Q ss_pred EEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 324 IFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 324 I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+++++ ++.+.+......... +.+....++...+|+.+..+++
T Consensus 281 ~~~~~------~l~~~l~~~~~~~t~-~~~~~~~aa~~a~L~~~~~~~~ 322 (420)
T 2pb2_A 281 MLTTQ------EIASAFHVGSHGSTY-GGNPLACAVAGAAFDIINTPEV 322 (420)
T ss_dssp EEECH------HHHTTCC----CCEE-CCCHHHHHHHHHHHHHHSSHHH
T ss_pred EEEhH------HHHHhhcCCCcCccc-CcCHHHHHHHHHHHHHHHhccH
Confidence 88876 555555432122222 2344555555667776655444
No 196
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.60 E-value=1e-14 Score=144.27 Aligned_cols=181 Identities=13% Similarity=0.033 Sum_probs=113.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhccCCC-----EEeec-CCCCCccccCCcccccccc-cc
Q 016668 147 DELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHD-----RIMGL-DLPHGGHLSHGFMTPKRRV-SG 219 (385)
Q Consensus 147 ~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~pGD-----~Vl~~-~~~~ggh~s~~~~~~~~~~-~~ 219 (385)
.++++.+++++.+.+|...+ ..-.+.+++|++|+..++.++++||| +|+++ +|.|.++..... .. ..
T Consensus 78 ~~lr~~ia~~~~~~~g~~~~-~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~-----~~~~~ 151 (417)
T 3g7q_A 78 TALLNALAVLLRETLGWDIE-PQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGL-----EDDLF 151 (417)
T ss_dssp HHHHHHHHHHHHHHHCCCCC-GGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC----------CCE
T ss_pred HHHHHHHHHHHHHHhCCCCC-cccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhcc-----chhhh
Confidence 37777777777777775431 11234445566799999999999988 89987 777655432110 00 01
Q ss_pred CcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCC---HHHHHHHHHHcCcEEEEecccccccc-
Q 016668 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFD---YPRMRQIADAVGALLMMDMAHISGLV- 293 (385)
Q Consensus 220 ~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~d---l~~I~~ia~~~ga~livD~ah~~Gli- 293 (385)
.+....+.+++.+..++.+|+++++ +. .++++|++..++|| ...+ +++|.++|+++|+++|+|++|.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~d~~~l~--~~-~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~ 228 (417)
T 3g7q_A 152 VSARPNIELLPEGQFKYHVDFEHLH--IG-EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG 228 (417)
T ss_dssp EECCCEEEEEGGGEEEEECCGGGCC--CC-TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC
T ss_pred ccccCcccccCCcccccccCHHHhc--cc-cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc
Confidence 1122233333222113468888887 43 36888888777765 4566 88999999999999999999853211
Q ss_pred --ccCcccCCCCCCcEEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 294 --AASVVADPFKYCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 294 --~~g~~~~p~~gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
..+..+ ...+.++++.|+||++ +|.|.|++++++ ++.+.+...
T Consensus 229 ~~~~~~~~-~~~~~~i~~~s~sK~~~~G~r~G~~~~~~------~~~~~~~~~ 274 (417)
T 3g7q_A 229 IIFSEARP-LWNPNIILCMSLSKLGLPGSRCGIIIAND------KTITAIANM 274 (417)
T ss_dssp CBCSCCCC-CCCTTEEEEEESGGGTCTTSCCEEEECCH------HHHHHHHHH
T ss_pred cccccccc-CCCCCEEEEEechhccCCCcceEEEEeCH------HHHHHHHHh
Confidence 111111 0124568899999964 667889998876 576666543
No 197
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.60 E-value=2.2e-14 Score=144.44 Aligned_cols=228 Identities=15% Similarity=0.153 Sum_probs=144.8
Q ss_pred cccCCh-HHHHHHHHHHHHhhhccccccC-------CCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHH
Q 016668 83 LGEADP-EVCEIITKEKERQFKSLELIAS-------ENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQ 154 (385)
Q Consensus 83 l~~~dp-~~~~~i~~e~~~~~~~l~Lias-------en~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~ 154 (385)
+...+| .++.+.++-+......++|--+ ..+..+.|++|....+.+....+|.. ..|.+ ++.+.++
T Consensus 24 v~~~p~d~i~~l~~~~~~d~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p---~~G~p---~lr~aia 97 (420)
T 4h51_A 24 IQAQAPDVIFDLAKRAAAAKGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLP---ISGYQ---PFIDEAV 97 (420)
T ss_dssp CCCCCCCHHHHHHHHHHHCCSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCC---TTCCH---HHHHHHH
T ss_pred CCCCCCChHHHHHHHHhcCCCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCC---cCChH---HHHHHHH
Confidence 555555 5677665543322234666522 23456899999876666555556765 45766 6766554
Q ss_pred HHHHHHcCCCCC-CCcceeecCCcHHHHHHHHHH----hccCCCEEeecCCCCCccccCCccccccccccCcce-EEEEe
Q 016668 155 KRALAAFNLDEN-KWGVNVQPLSGSPANFEVYTA----ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-FESMP 228 (385)
Q Consensus 155 ~~la~lfg~~~~-~~~~~V~~~sGs~A~~~a~~a----ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-~~~i~ 228 (385)
++ +||-... +....+++.+||.|+..++.. +++|||+|++++|.++.|.. .+...|.. +...+
T Consensus 98 ~~---~~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~--------i~~~aG~~~V~~~~ 166 (420)
T 4h51_A 98 KI---IYGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYG--------VVKAAGWKNICTYA 166 (420)
T ss_dssp HH---HHC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHH--------HHHHTTCCCEEEEE
T ss_pred HH---hcCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHH--------HHHHcCCeEEEeec
Confidence 43 3454321 111345667788777655543 46899999999998766532 33456654 33333
Q ss_pred ccccCCCCCCCHHHHHHHhhhc--CCcEEEEcCCCCCCC-----CCHHHHHHHHHHcCcEEEEeccccccccccCcccCC
Q 016668 229 YRLDESTGLVDYDMLEKTAILF--RPKLIIAGASAYPRD-----FDYPRMRQIADAVGALLMMDMAHISGLVAASVVADP 301 (385)
Q Consensus 229 ~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~s~~~~~-----~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p 301 (385)
+ .++++..+|.+.+.+.++.. +.++++.+.++||+- .++++|.++|+++++++++|+++ .|+..++....+
T Consensus 167 ~-~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y-~~~~~~~~~~~~ 244 (420)
T 4h51_A 167 Y-YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAY-QGYASGSLDTDA 244 (420)
T ss_dssp C-EEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESC-TTTTTSCHHHHT
T ss_pred c-ccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhh-hhhccCCcccch
Confidence 3 34456678999988877543 345677777888742 24789999999999999999996 677654422111
Q ss_pred C------C-CCc-EEEECCCccC--ccccEEEEEEeCC
Q 016668 302 F------K-YCD-VVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 302 ~------~-gaD-iv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
+ + +.. +++.|++|++ +|+|.|++.+..+
T Consensus 245 ~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~ 282 (420)
T 4h51_A 245 YAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLK 282 (420)
T ss_dssp HHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECS
T ss_pred HHHHhHHhhCceEEEEeccccccccccCceEEEEeccc
Confidence 1 1 222 6789999985 8999999988776
No 198
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.60 E-value=3.6e-14 Score=138.36 Aligned_cols=222 Identities=16% Similarity=0.150 Sum_probs=131.2
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHH---hc-
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA---IL- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~a---ll- 189 (385)
+++.+++++...+... +.+..+| ..+...++ ++++++++|++ + ..+.+++|++|+..++.+ +.
T Consensus 45 ~~~~v~~a~~~~~~~~---~~~~~~y--~~~~~~~l----~~~la~~~g~~-~---~v~~~~g~t~a~~~~~~~~~~~~~ 111 (375)
T 2eh6_A 45 AYPKLTEALKEQVEKL---LHVSNLY--ENPWQEEL----AHKLVKHFWTE-G---KVFFANSGTESVEAAIKLARKYWR 111 (375)
T ss_dssp SCHHHHHHHHHHHHHC---SCCCTTB--CCHHHHHH----HHHHHHTSSSC-E---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc---cccCccc--CCHHHHHH----HHHHHhhcCCC-C---eEEEeCchHHHHHHHHHHHHHHhc
Confidence 6899999998776532 1222223 12323333 45788889983 2 135566778899988865 35
Q ss_pred --cCC-CEEeecCCCCCccccCCccccccccccCcce-----EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 190 --KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 190 --~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
+|| |+|++.++.+.++...............+.. +..++ .+|+++|++.+++ ++++|++++++
T Consensus 112 ~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~~~v~~~~~~ 182 (375)
T 2eh6_A 112 DKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAK--------LNDIDSVYKLLDE-ETAGIIIEVIQ 182 (375)
T ss_dssp HTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEEC--------TTCHHHHHTTCCT-TEEEEEECSEE
T ss_pred cCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCC--------CchHHHHHHHhcC-CeEEEEEeCcc
Confidence 789 9999999875443210000000000000100 11111 2589999998864 78999987765
Q ss_pred CC--CCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEEEEeCCCC
Q 016668 262 YP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPV 331 (385)
Q Consensus 262 ~~--~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~~ 331 (385)
++ ...+ +++|.++|+++|+++++|++|. |+...+... ..+. ..|++++| |++. |++.|++++++
T Consensus 183 ~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~--- 256 (375)
T 2eh6_A 183 GEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQT-GIGRTGEFYAYQHFNLKPDVIALA--KGLGGGVPIGAILARE--- 256 (375)
T ss_dssp TTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEH---
T ss_pred CCCCCcCCCHHHHHHHHHHHHHhCCEEEEecccc-CCCCCCcchhhhhcCCCCCEEEEc--ccccCCCCeEEEEEcH---
Confidence 54 4446 9999999999999999999996 443222111 1112 37888655 9884 45679998887
Q ss_pred chhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 332 LGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 332 ~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
++.+++.........+.+.....++ ..+|+..
T Consensus 257 ---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 288 (375)
T 2eh6_A 257 ---EVAQSFTPGSHGSTFGGNPLACRAG-TVVVDEV 288 (375)
T ss_dssp ---HHHTTCCTTSCCCSSTTCHHHHHHH-HHHHHHH
T ss_pred ---HHHhhhcCCCCCCCCCCCHHHHHHH-HHHHHHH
Confidence 5666665432223334433333333 4456544
No 199
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.60 E-value=1.9e-14 Score=143.55 Aligned_cols=166 Identities=13% Similarity=-0.010 Sum_probs=114.1
Q ss_pred HHHHHHcCCCCCCCcceeecCCcH-HHH--HHHHHHhcc--C----------CCEEeecCCCCCccccCCcccccccccc
Q 016668 155 KRALAAFNLDENKWGVNVQPLSGS-PAN--FEVYTAILK--P----------HDRIMGLDLPHGGHLSHGFMTPKRRVSG 219 (385)
Q Consensus 155 ~~la~lfg~~~~~~~~~V~~~sGs-~A~--~~a~~all~--p----------GD~Vl~~~~~~ggh~s~~~~~~~~~~~~ 219 (385)
+.++++++++.+ +|.+++|+ +++ ..++.++++ | ||+|++.+|.|.++.. .+..
T Consensus 85 ~~ia~~~~~~~~----~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~--------~~~~ 152 (427)
T 3ppl_A 85 QIWADLLGVPVE----QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFS--------ITER 152 (427)
T ss_dssp HHHHHHHTSCGG----GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHH--------HHHH
T ss_pred HHHHHHhCCCcc----eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHH--------HHHH
Confidence 356777788764 45556554 587 378888877 7 9999999987655422 3445
Q ss_pred CcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc-CCCCC--CCCCHH---HHHHHH-HHcCcEEEEeccccccc
Q 016668 220 TSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG-ASAYP--RDFDYP---RMRQIA-DAVGALLMMDMAHISGL 292 (385)
Q Consensus 220 ~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~-~s~~~--~~~dl~---~I~~ia-~~~ga~livD~ah~~Gl 292 (385)
.|..+..++ +++ ++ +|+++|++.++..++|+|++. .++|| ...+.+ +|.++| +++|+++|+|++|. ++
T Consensus 153 ~g~~~~~v~--~~~-~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~-~~ 227 (427)
T 3ppl_A 153 FGFEMISVP--MNE-DG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYA-VH 227 (427)
T ss_dssp TTCEEEEEE--EET-TE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTT-TC
T ss_pred cCCEEEEeC--CCC-CC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCc-cc
Confidence 676554444 553 34 999999999854578888865 44555 566665 888888 99999999999974 43
Q ss_pred cccCcccCC---C-------C-CCcEEEECCCccC-ccccEEEEEEeCCCCchhHHHHHHhhc
Q 016668 293 VAASVVADP---F-------K-YCDVVTTTTHKSL-RGPRGGMIFFKKDPVLGVELESAINNA 343 (385)
Q Consensus 293 i~~g~~~~p---~-------~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~~~~~~~~~i~~~ 343 (385)
.+.+....+ + . +.++++.|+||++ +|.|.|++++++ ++.+.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~------~l~~~~~~~ 284 (427)
T 3ppl_A 228 TLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSA------ENRKWYTGH 284 (427)
T ss_dssp BSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCH------HHHHHHHHH
T ss_pred ccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCH------HHHHHHHHH
Confidence 333321111 1 1 3458899999985 678999999887 566666543
No 200
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.59 E-value=2.2e-14 Score=142.38 Aligned_cols=232 Identities=15% Similarity=0.012 Sum_probs=136.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHH---Hhcc
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYT---AILK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~---all~ 190 (385)
.++.|++++...+.. +. +....++ ..+...+ .++.++++++.+..+ -.+++++|++|+..++. ++.+
T Consensus 58 ~~~~v~~a~~~~~~~-~~--~~~~~~~-~~~~~~~----l~~~la~~~~~~~~~--~v~~~~g~~~a~~~~~~~a~~~~~ 127 (426)
T 1sff_A 58 LHPKVVAAVEAQLKK-LS--HTCFQVL-AYEPYLE----LCEIMNQKVPGDFAK--KTLLVTTGSEAVENAVKIARAATK 127 (426)
T ss_dssp TCHHHHHHHHHHTTT-CS--CCCTTTE-ECHHHHH----HHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHh-CC--Ccccccc-CCHHHHH----HHHHHHHhCCccccc--EEEEeCchHHHHHHHHHHHHHhhC
Confidence 689999999877643 22 1111121 2232333 445688888322211 23555667789999987 6778
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcc-------------eEEEEeccccC--CCCCCCHHHHHHHhhh----cC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-------------YFESMPYRLDE--STGLVDYDMLEKTAIL----FR 251 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-------------~~~~i~~~~~~--~~~~iD~d~le~~i~~----~~ 251 (385)
+| +|++.++.+.+.... .+...|. .+..++++.+. .++.+|+++|++.++. .+
T Consensus 128 ~~-~vi~~~p~y~~~~~~-------~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 199 (426)
T 1sff_A 128 RS-GTIAFSGAYHGRTHY-------TLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPED 199 (426)
T ss_dssp CC-EEEEETTCCCCSSHH-------HHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGG
T ss_pred CC-eEEEECCCcCCCchH-------hhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCc
Confidence 87 788888765332110 1111221 13445543211 1234799999998863 35
Q ss_pred CcEEEEcC--CCCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccE
Q 016668 252 PKLIIAGA--SAYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRG 321 (385)
Q Consensus 252 pklIi~~~--s~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-Gprg 321 (385)
+++|++.+ ++.|...+ +++|.++|+++|++||+|++|. |+...|... ...+ ..|++ |++|+|. |.|.
T Consensus 200 ~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~di~--s~sK~~~~Glri 276 (426)
T 1sff_A 200 IAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQS-GAGRTGTLFAMEQMGVAPDLT--TFAKSIAGGFPL 276 (426)
T ss_dssp EEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTSCCSEE--EECGGGGTSSCC
T ss_pred eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-ccCcccchhhhhhcCCCCCEE--EEcccccCCCce
Confidence 77888754 23454556 9999999999999999999996 664433211 1112 35665 6679984 4566
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
|++++++ ++.+.+......... +.+....++...+|+.+...++.
T Consensus 277 G~~~~~~------~~~~~l~~~~~~~~~-~~~~~~~~a~~aal~~~~~~~~~ 321 (426)
T 1sff_A 277 AGVTGRA------EVMDAVAPGGLGGTY-AGNPIACVAALEVLKVFEQENLL 321 (426)
T ss_dssp EEEEEEH------HHHTTSCTTSBCCSS-SSCHHHHHHHHHHHHHHHHTTHH
T ss_pred EEEEEcH------HHHhhhccCCcCcCC-CCCHHHHHHHHHHHHHHHhcCHH
Confidence 9999987 566655432222222 34555566666677765444443
No 201
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.59 E-value=2.4e-14 Score=148.68 Aligned_cols=196 Identities=14% Similarity=0.109 Sum_probs=124.3
Q ss_pred CCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC--CCCCcceeecCCcH-HHHHHHHHH--
Q 016668 113 FTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD--ENKWGVNVQPLSGS-PANFEVYTA-- 187 (385)
Q Consensus 113 ~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~--~~~~~~~V~~~sGs-~A~~~a~~a-- 187 (385)
++++.+.+++...+.. .+||.. .++.+ ..+.+++.++.+.++.. .... .+|.+++|+ +|+..++.+
T Consensus 116 ~~~~~~~~al~~~~~~---~~Y~~~--~g~~~---lr~~ia~~~~~~~~~~~~~~~~~-~~I~~t~G~~eal~~~~~~l~ 186 (546)
T 2zy4_A 116 LDPAAFLHEMVDGILG---CNYPVP--PRMLN---ISEKIVRQYIIREMGADAIPSES-VNLFAVEGGTAAMAYIFESLK 186 (546)
T ss_dssp CCHHHHHHHHHHHHHT---CSCCSS--SSCCH---HHHHHHHHHHHHHTTCTTSCGGG-EEEEEEEHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHhhhc---CCCCCC--cCCHH---HHHHHHHHHHHHhccCCCCCCCc-ceEEEECCHHHHHHHHHHHhh
Confidence 4566777777655531 345542 11222 23344555566665431 1001 256666665 588888877
Q ss_pred ---hccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCC-CCCCHHHHHHHhhhcCCcEEEEcCCCCC
Q 016668 188 ---ILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDEST-GLVDYDMLEKTAILFRPKLIIAGASAYP 263 (385)
Q Consensus 188 ---ll~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~-~~iD~d~le~~i~~~~pklIi~~~s~~~ 263 (385)
+++|||+|++.+|.|.++.. .+.+.+...++++++.++++ +.+|+++|++.+. .++|+|+++.++||
T Consensus 187 ~~~l~~~Gd~Vlv~~P~y~~~~~--------~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~-~~~k~v~l~~p~NP 257 (546)
T 2zy4_A 187 LNGLLKAGDKVAIGMPVFTPYIE--------IPELAQYALEEVAINADPSLNWQYPDSELDKLKD-PAIKIFFCVNPSNP 257 (546)
T ss_dssp HTTSSCTTCEEEEEESCCHHHHH--------HHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS-TTEEEEEEESSCSS
T ss_pred hhhcCCCCCEEEEeCCCCccHHH--------HHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC-CCCeEEEEECCCCC
Confidence 57999999999997765432 11122222344444455433 4799999988764 37899988888876
Q ss_pred C--CCC---HHHHHHHH--HHcCcEEEEeccccccccccCcccCCCC---CCcEEEECCCccC--ccccEEEEEEeCC
Q 016668 264 R--DFD---YPRMRQIA--DAVGALLMMDMAHISGLVAASVVADPFK---YCDVVTTTTHKSL--RGPRGGMIFFKKD 329 (385)
Q Consensus 264 ~--~~d---l~~I~~ia--~~~ga~livD~ah~~Gli~~g~~~~p~~---gaDiv~~S~hK~l--~GprgG~I~~~~~ 329 (385)
+ ..+ +++|.++| +++|++||+|++|. ++... .++.+. +.++++.|++|++ +|.|.|+++++++
T Consensus 258 tG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~-~~~~~--~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 258 PSVKMDQRSLERVRNIVAEHRPDLMILTDDVYG-TFADD--FQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp SCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTG-GGSTT--CCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred CCccCCHHHHHHHHHHHHhccCCcEEEEeCcch-hhccc--CcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 3 444 67788888 78999999999985 33321 122111 3458899999997 6889999999885
No 202
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.58 E-value=1.7e-14 Score=142.21 Aligned_cols=218 Identities=15% Similarity=0.098 Sum_probs=134.6
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.++.+.+++...+.. +.. ... .| ..+..++ .++++++++|.+. .+.++||++|+..++.++..
T Consensus 57 ~~~~v~~a~~~~~~~-~~~--~~~-~~-~~~~~~~----l~~~la~~~g~~~-----v~~~~gg~~a~~~al~~~~~~~~ 122 (397)
T 2ord_A 57 SHPRLVEAIKDQAEK-LIH--CSN-LF-WNRPQME----LAELLSKNTFGGK-----VFFANTGTEANEAAIKIARKYGK 122 (397)
T ss_dssp TCHHHHHHHHHHHHH-CSC--CCT-TS-EEHHHHH----HHHHHHHTTTSCE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccc--Ccc-cc-CCHHHHH----HHHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 479999999887654 322 111 12 2333333 4557888888543 35677889999999988764
Q ss_pred ---C-CCEEeecCCCCCccccCCccccccccccCcce------------EEEEeccccCCCCCCCHHHHHHHhhhcCCcE
Q 016668 191 ---P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY------------FESMPYRLDESTGLVDYDMLEKTAILFRPKL 254 (385)
Q Consensus 191 ---p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~------------~~~i~~~~~~~~~~iD~d~le~~i~~~~pkl 254 (385)
| +|+|++.++.+.+... ..+...|.. +..++ . .|+++|++.+++ ++++
T Consensus 123 ~~~~~~~~vi~~~~~yh~~~~-------~~~~~~g~~~~~~~~~p~~~~~~~~~--~------~d~~~l~~~l~~-~~~~ 186 (397)
T 2ord_A 123 KKSEKKYRILSAHNSFHGRTL-------GSLTATGQPKYQKPFEPLVPGFEYFE--F------NNVEDLRRKMSE-DVCA 186 (397)
T ss_dssp HHCTTCCEEEEEBTCCCCSSH-------HHHHHSBCHHHHGGGCSCCTTEEEEC--T------TCHHHHHHHCCT-TEEE
T ss_pred cCCCCCceEEEEcCCcCCCch-------hhhhccCChhhccccCCCCCCeeEec--C------CCHHHHHHHhhc-CeEE
Confidence 5 4788888775532211 011223321 22222 1 389999999864 7899
Q ss_pred EEEcCCCCC--C----CCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEE
Q 016668 255 IIAGASAYP--R----DFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMI 324 (385)
Q Consensus 255 Ii~~~s~~~--~----~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I 324 (385)
|+++++++| . ..++++|.++|+++|++|++|++|. |+...|... ..++ ..|++ |++|+|. |.+.|++
T Consensus 187 v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~G~r~G~~ 263 (397)
T 2ord_A 187 VFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLFAYQKYGVVPDVL--TTAKGLGGGVPIGAV 263 (397)
T ss_dssp EEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEE--EECGGGGTTSCCEEE
T ss_pred EEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccchhhhhhCCCCCee--eeccccCCCcCeEEE
Confidence 999877665 3 2368999999999999999999995 665433211 1112 36876 5579985 5678999
Q ss_pred EEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 325 FFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+++++ +. .+......... +++....++...+|+.+..++.
T Consensus 264 ~~~~~------~~-~l~~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~ 303 (397)
T 2ord_A 264 IVNER------AN-VLEPGDHGTTF-GGNPLACRAGVTVIKELTKEGF 303 (397)
T ss_dssp EECST------TC-CCCTTSSCCSS-TTCHHHHHHHHHHHHHHTSTTH
T ss_pred EEchH------hc-ccCCCCcCCCC-CCCHHHHHHHHHHHHHHHhCCH
Confidence 88874 33 33321111112 3455566666667776654333
No 203
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.58 E-value=6.3e-14 Score=140.82 Aligned_cols=233 Identities=17% Similarity=0.082 Sum_probs=137.8
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK-- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~-- 190 (385)
.+|.|.+++...+.+ +. + .++..+ .+ +....+++++++++.+.+ ..++++||++|+..++.++..
T Consensus 67 ~~~~v~~a~~~~~~~-~~--~--~~~~~~~~~----~~~~l~~~la~~~~~~~~---~v~~~~ggsea~~~al~~~~~~~ 134 (449)
T 3a8u_X 67 TRKEIQEAVAKQLST-LD--Y--SPGFQYGHP----LSFQLAEKITDLTPGNLN---HVFFTDSGSECALTAVKMVRAYW 134 (449)
T ss_dssp SCHHHHHHHHHHTTT-CS--C--CCSSSCCCH----HHHHHHHHHHTTSSTTEE---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-CC--C--ccccccCCH----HHHHHHHHHHHhCCCCCC---EEEEcCcHHHHHHHHHHHHHHHH
Confidence 379999999877643 21 1 111112 23 222345678888876543 235567788999999988764
Q ss_pred ------CCCEEeecCCCCCccccCCccccccccccCc------------ceEEEEeccccCC-C-CCCC--------HHH
Q 016668 191 ------PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS------------IYFESMPYRLDES-T-GLVD--------YDM 242 (385)
Q Consensus 191 ------pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g------------~~~~~i~~~~~~~-~-~~iD--------~d~ 242 (385)
+||+|++.++.+.+.... .+...| ..+..++++.... . ..+| +++
T Consensus 135 ~~~g~~~~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~ 207 (449)
T 3a8u_X 135 RLKGQATKTKMIGRARGYHGVNIA-------GTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADE 207 (449)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHH-------HHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCcCCCChh-------hhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHH
Confidence 789999988765432110 111111 1234444322100 0 0146 999
Q ss_pred HHHHhhh---cCCcEEEEcCCC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEE
Q 016668 243 LEKTAIL---FRPKLIIAGASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTT 310 (385)
Q Consensus 243 le~~i~~---~~pklIi~~~s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~ 310 (385)
|++.+++ .++++|++++.+ .|...+ +++|+++|+++|++||+|++|. |+...|.. . ..+. ..|++
T Consensus 208 le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~di~-- 284 (449)
T 3a8u_X 208 LLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVIT-GFGRTGSMFGADSFGVTPDLM-- 284 (449)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEE--
T ss_pred HHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccCcchhhhhcCCCCCEE--
Confidence 9998864 246778776543 355567 9999999999999999999994 33222211 1 1112 35776
Q ss_pred CCCccCcc--ccEEEEEEeCCCCchhHHHHHHhhcc--------CCCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 311 TTHKSLRG--PRGGMIFFKKDPVLGVELESAINNAV--------FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 311 S~hK~l~G--prgG~I~~~~~~~~~~~~~~~i~~~~--------fp~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
|++|+|.| .+.|++++++ ++.+.+.... ..+..-+.+...+++...+++.+.++++.+
T Consensus 285 s~sK~l~~G~~~~G~~~~~~------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~ 352 (449)
T 3a8u_X 285 CIAKQVTNGAIPMGAVIAST------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQ 352 (449)
T ss_dssp EECGGGGTTSSCCEEEEEEH------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred EEcccccCCCCceEEEEECH------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHhcCHHH
Confidence 55699965 6788888887 6777776531 111122344555666666777655444433
No 204
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.57 E-value=9e-14 Score=138.92 Aligned_cols=226 Identities=15% Similarity=0.082 Sum_probs=131.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--C
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--p 191 (385)
.+|.|.+++...+......+|+. + .....+++++++++ +.+ -.++++|||+|+..++..+.. +
T Consensus 72 ~~p~v~~a~~~~~~~~~~~~~~~-------~----~~~~l~~~la~~~~-~~~---~v~~~~sGsea~~~ai~~a~~~~~ 136 (434)
T 3l44_A 72 AHPHITKAITTAAENGVLYGTPT-------A----LEVKFAKMLKEAMP-ALD---KVRFVNSGTEAVMTTIRVARAYTG 136 (434)
T ss_dssp TCHHHHHHHHHHHHHCSCCSSCC-------H----HHHHHHHHHHHHCT-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCcCCCCCC-------H----HHHHHHHHHHHhCC-CCC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 48999999887775432222222 2 22223456888886 332 245667899999999987754 7
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCC-------------CCHHHHHHHhhh--cCCcEEE
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDMLEKTAIL--FRPKLII 256 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~-------------iD~d~le~~i~~--~~pklIi 256 (385)
+|+|++.++.+.|+... .+...|.......++. ..+. .|+++|++.+++ .++++|+
T Consensus 137 ~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 207 (434)
T 3l44_A 137 RTKIMKFAGCYHGHSDL-------VLVAAGSGPSTLGTPD--SAGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAIL 207 (434)
T ss_dssp CCEEEEETTCCCCSSGG-------GGBC-------CCCBS--STTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEE
T ss_pred CCEEEEEcCccCCCcHH-------HHhhcCCcccccCCCC--cCCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEE
Confidence 89999988765332110 1112221111111000 0111 289999998864 2456777
Q ss_pred EcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccEEEEEE
Q 016668 257 AGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFF 326 (385)
Q Consensus 257 ~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~GprgG~I~~ 326 (385)
+++.+. +...+ +++|+++|+++|++||+|++| .|+ ..|... ..+. ..|+++ ++|++ +|++.|++++
T Consensus 208 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~-~g~-~~g~~~~~~~~~~~~di~t--~sK~~~~G~~iG~~~~ 283 (434)
T 3l44_A 208 VEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVI-TAF-RFMYGGAQDLLGVTPDLTA--LGKVIGGGLPIGAYGG 283 (434)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTT-TTT-TSSSSCHHHHHTCCCSEEE--EEGGGGTTSSCEEEEE
T ss_pred EcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccc-cce-eccccHHHHHcCCCCCeee--hhhhhcCCcCeeeEEE
Confidence 765432 33444 999999999999999999998 455 333211 1112 346654 55988 5568898888
Q ss_pred eCCCCchhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 327 KKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++ ++.+.+... .+.+...+.+....++..++++.+.++++.
T Consensus 284 ~~------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~ 326 (434)
T 3l44_A 284 KK------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLY 326 (434)
T ss_dssp CH------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHH
T ss_pred cH------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHH
Confidence 77 576666542 122222234555555656677766555553
No 205
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.57 E-value=6.4e-14 Score=138.00 Aligned_cols=228 Identities=13% Similarity=0.102 Sum_probs=133.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.. ...++. ++ ..+ ..+..++++++++|.+. .++++||++|+..++.++.
T Consensus 53 ~~p~v~~a~~~~~~~-~~~~~~--~~--~~~----~~~~l~~~la~~~~~~~-----v~~~~gg~ea~~~al~~~~~~~~ 118 (395)
T 3nx3_A 53 NHAKFNAKIKAQVDK-LLHTSN--LY--YNE----NIAAAAKNLAKASALER-----VFFTNSGTESIEGAMKTARKYAF 118 (395)
T ss_dssp SCHHHHHHHHHHHTT-CSCCCT--TS--BCH----HHHHHHHHHHHHHTCSE-----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccc--cc--CCH----HHHHHHHHHHHhcCCCe-----EEEeCCHHHHHHHHHHHHHHHhh
Confidence 479999999877643 222221 11 233 33334567888888432 4667788999999988775
Q ss_pred ---cCCCEEeecCCCCCccccCCc-ccc---c-cccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC
Q 016668 190 ---KPHDRIMGLDLPHGGHLSHGF-MTP---K-RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA 261 (385)
Q Consensus 190 ---~pGD~Vl~~~~~~ggh~s~~~-~~~---~-~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~ 261 (385)
.+||+|++.++.+.|...... ... . ......+..+..++ ..|+++|++.++. ++++|++.+++
T Consensus 119 ~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d~~~l~~~l~~-~~~~v~~~~~~ 189 (395)
T 3nx3_A 119 NKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAK--------YNDISSVEKLVNE-KTCAIILESVQ 189 (395)
T ss_dssp HTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEEC--------TTCHHHHHTTCCT-TEEEEEEESEE
T ss_pred ccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeC--------CCCHHHHHHhccC-CeEEEEEeCcc
Confidence 458999999887643321000 000 0 00000111122222 2389999998864 67888876543
Q ss_pred C--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc--cCCCC-CCcEEEECCCccC-ccccEEEEEEeCCCC
Q 016668 262 Y--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV--ADPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKDPV 331 (385)
Q Consensus 262 ~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~--~~p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~~~ 331 (385)
+ +...+ +++|+++|+++|++||+|++|. |+...|.. ....+ ..|++++ +|++ .|++.|++++++
T Consensus 190 ~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~-~~g~~g~~~~~~~~~~~~d~~t~--sK~~~~G~~~G~~~~~~--- 263 (395)
T 3nx3_A 190 GEGGINPANKDFYKALRKLCDEKDILLIADEIQC-GMGRSGKFFAYEHAQILPDIMTS--AKALGCGLSVGAFVINQ--- 263 (395)
T ss_dssp CTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEE--CGGGTTTSCCEEEEECH---
T ss_pred CCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCcCCcchhHHhcCCCCCEEEe--cccccCCCceEEEEEch---
Confidence 2 23334 8999999999999999999984 44322221 11122 3566654 5987 456889999887
Q ss_pred chhHH-HHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 332 LGVEL-ESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 332 ~~~~~-~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
++ .+.+........++ .+....++...+++.+..+++.+
T Consensus 264 ---~~~~~~~~~~~~~~~~~-~~~~~~~aa~aal~~~~~~~~~~ 303 (395)
T 3nx3_A 264 ---KVASNSLEAGDHGSTYG-GNPLVCAGVNAVFEIFKEEKILE 303 (395)
T ss_dssp ---HHHHHHSCTTCCSSCBS-CCHHHHHHHHHHHHHHHHTTHHH
T ss_pred ---hhhhhhcCCcccCCCCC-CCHHHHHHHHHHHHHHHhhHHHH
Confidence 56 66665443333333 34444555555776554444433
No 206
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.57 E-value=9.7e-14 Score=138.90 Aligned_cols=230 Identities=15% Similarity=0.088 Sum_probs=133.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
.+|.|.+++...+... . .|.. ..|.. ++....+++++++++....+ ..++++||++|+..++.++ ..+
T Consensus 60 ~~p~v~~a~~~~~~~~-~-~~~~---~~~~~---~~~~~l~~~la~~~~~~~~~--~v~~~~ggsea~~~al~~~~~~~~ 129 (439)
T 3dxv_A 60 GHPAIVAAVSAAAANP-A-GATI---LSASN---APAVTLAERLLASFPGEGTH--KIWFGHSGSDANEAAYRAIVKATG 129 (439)
T ss_dssp SCHHHHHHHHHHHHSC-S-CSCS---SSSEE---HHHHHHHHHHHHTTTCTTTE--EEEEESSHHHHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHhc-c-Cccc---cccCC---HHHHHHHHHHHHhCCCCCCC--EEEEeCCHHHHHHHHHHHHHHHhC
Confidence 5899999998776542 2 2221 11222 34444566888988654311 2466778899999999876 446
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceE------------EEEeccccCCCCCC-----CHHHHHHHhh---hcC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF------------ESMPYRLDESTGLV-----DYDMLEKTAI---LFR 251 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~------------~~i~~~~~~~~~~i-----D~d~le~~i~---~~~ 251 (385)
+++|++.++.+.|... . .+...+... ....++.+ ..+.. |+++|++.++ ..+
T Consensus 130 ~~~vi~~~~~yhg~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (439)
T 3dxv_A 130 RSGVIAFAGAYHGCTV-----G--SMAFSGHSVQADAAKADGLILLPYPDPYR-PYRNDPTGDAILTLLTEKLAAVPAGS 201 (439)
T ss_dssp CCEEEEETTCCCCSSH-----H--HHCC-------------CEEEECCCCSSS-CBTTBTTSHHHHHHHHHHHHTSCTTC
T ss_pred CCEEEEECCCCCCCcH-----H--HHhhcCCCchhhccccCCCCCCcEEcCCC-cccccccHHHHHHHHHHHHHhcCCCC
Confidence 7788887765422211 0 111222110 01111111 11111 7999999984 335
Q ss_pred CcEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCc-cc-CCCC-CCcEEEECCCccC-ccccE
Q 016668 252 PKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASV-VA-DPFK-YCDVVTTTTHKSL-RGPRG 321 (385)
Q Consensus 252 pklIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~-~~-~p~~-gaDiv~~S~hK~l-~Gprg 321 (385)
+++|+++++++ +...+ +++|+++|+++|++||+|++|. |+...|. .. ..++ ..|++ |++|++ .|++.
T Consensus 202 ~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-g~g~~g~~~~~~~~~~~~di~--s~sK~~~~G~ri 278 (439)
T 3dxv_A 202 IGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKV-GLARSGRLHCFEHEGFVPDIL--VLGKGLGGGLPL 278 (439)
T ss_dssp EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-CTTTTSSSSGGGGTTCCCSEE--EECGGGGTTSCC
T ss_pred EEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcCchhhHHHhcCCCCCEE--EEcchhcCCcce
Confidence 67888876543 34455 9999999999999999999995 5533332 11 1122 35666 667998 45788
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|++++++ ++.+.+......... .+....++...+++.+..+++
T Consensus 279 G~~~~~~------~~~~~~~~~~~~~t~--~~~~~~~aa~aal~~~~~~~~ 321 (439)
T 3dxv_A 279 SAVIAPA------EILDCASAFAMQTLH--GNPISAAAGLAVLETIDRDDL 321 (439)
T ss_dssp EEEEEEH------HHHTSCSSSSCCTTT--TCHHHHHHHHHHHHHHHHTTH
T ss_pred EEEEECH------HHHhhhcCCCcCCCc--ccHHHHHHHHHHHHHHHhcCH
Confidence 9999987 566666543222222 334444444556665544444
No 207
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.55 E-value=2.1e-13 Score=136.14 Aligned_cols=231 Identities=12% Similarity=0.053 Sum_probs=130.6
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc-----
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL----- 189 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all----- 189 (385)
+|.|.+++...+.+ ....++. ++ -. ......+++++++++.+.+ -.++++||++|+..++.+++
T Consensus 47 ~p~v~~a~~~~~~~-~~~~~~~-~~--~~----~~~~~l~~~la~~~~~~~~---~v~~~~gg~ea~~~al~~~~~~~~~ 115 (430)
T 3i4j_A 47 RAEVGERMAAQAAR-LPFVHGS-QF--SS----DVLEEYAGRLARFVGLPTF---RFWAVSGGSEATESAVKLARQYHVE 115 (430)
T ss_dssp CHHHHHHHHHHHHH-CCCCCTT-TC--EE----HHHHHHHHHHHHHTTCTTC---EEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-ccccccc-cc--CC----HHHHHHHHHHHHhCCCCCC---EEEEeCcHHHHHHHHHHHHHHHHHh
Confidence 78999998877653 2211111 11 12 2333455678899987654 13556678899999998886
Q ss_pred ---cCCCEEeecCCCCCccccCCccccccccccCcc--------------eEEEEeccccCCCCCCCHHHHHHHhhh---
Q 016668 190 ---KPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI--------------YFESMPYRLDESTGLVDYDMLEKTAIL--- 249 (385)
Q Consensus 190 ---~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~--------------~~~~i~~~~~~~~~~iD~d~le~~i~~--- 249 (385)
.+||+|++.++.+.|+... .....+. .+..++++-....+..|+++|++.++.
T Consensus 116 ~g~~~~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~ 188 (430)
T 3i4j_A 116 RGEPGRFKVITRVPSYHGASLG-------SLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGP 188 (430)
T ss_dssp TTCTTCCEEEEETTC--------------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCG
T ss_pred cCCCCCcEEEEEeCCcCCCCcc-------cccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCC
Confidence 4578999988865443210 0111111 111122110000022467899998864
Q ss_pred cCCcEEEEcCCCC-C--CCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCC-C-CCcEEEECCCccCc-
Q 016668 250 FRPKLIIAGASAY-P--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPF-K-YCDVVTTTTHKSLR- 317 (385)
Q Consensus 250 ~~pklIi~~~s~~-~--~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~-~-gaDiv~~S~hK~l~- 317 (385)
.++++|++++.+. + ...+ +++|+++|+++|++||+|++|. |+...|... ..+ + ..|+++ ++|+|.
T Consensus 189 ~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~~~~g~~~~~~~~~~~~~di~t--~sK~l~~ 265 (430)
T 3i4j_A 189 ETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMS-GMGRCGSPLALSRWSGVTPDIAV--LGKGLAA 265 (430)
T ss_dssp GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTTCCCSEEE--ECGGGTT
T ss_pred CCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhh-CCCcccchhhhhhhcCCCCcEEE--EcccccC
Confidence 3456777765443 1 2233 8999999999999999999984 543333211 112 2 346665 459984
Q ss_pred c-ccEEEEEEeCCCCchhHHHHHHhhc----cCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 318 G-PRGGMIFFKKDPVLGVELESAINNA----VFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 318 G-prgG~I~~~~~~~~~~~~~~~i~~~----~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
| +|.|++++++ ++.+.+... ...... +.+....++..++|+.+..+++.
T Consensus 266 G~~r~G~~~~~~------~i~~~~~~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~~~~~ 319 (430)
T 3i4j_A 266 GYAPLAGLLAAP------QVYETVMGGSGAFMHGFTY-AGHPVSVAAGLSVLDIVEREDLT 319 (430)
T ss_dssp TSSCCEEEEECH------HHHHHHHHTTCBCCCCCTT-TTCHHHHHHHHHHHHHHHHTTHH
T ss_pred CccccEEEEECH------HHHHHHhccCCcccccCCC-CCCHHHHHHHHHHHHHHHcccHH
Confidence 5 7779999977 677777653 111222 33444455555577655444443
No 208
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.55 E-value=1.8e-14 Score=144.70 Aligned_cols=161 Identities=14% Similarity=0.086 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCcceeecCCc-HHHHHHHHHHh-ccCCCEEeecCCCCCccccCCccccccccccCcceE
Q 016668 147 DELETLCQKRALAAFNLDENKWGVNVQPLSG-SPANFEVYTAI-LKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYF 224 (385)
Q Consensus 147 ~~le~~~~~~la~lfg~~~~~~~~~V~~~sG-s~A~~~a~~al-l~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~ 224 (385)
.++.+.+++++++++|++.+ ++.+++| +.++.+++.++ +++||+|+++++.|.++.. .+ ...+...|..+
T Consensus 107 ~~~~~~~~~~la~~~g~~~~----~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~-~~---~~~a~~~G~~v 178 (438)
T 1wyu_A 107 LQATFEYQTMIAELAGLEIA----NASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRA-VL---RAYLEAVGAKL 178 (438)
T ss_dssp HHHHHHHHHHHHHHHTSSEE----CSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHH-HH---HHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHhCCCcc----ceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHH-HH---HHHHHHCCCEE
Confidence 35566678899999999863 4444554 43545555553 6899999999886644321 00 00113367655
Q ss_pred EEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCC-CCCCCCHHHHHHHHHHcCcEEEEecc-ccccccccCcccCCC
Q 016668 225 ESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASA-YPRDFDYPRMRQIADAVGALLMMDMA-HISGLVAASVVADPF 302 (385)
Q Consensus 225 ~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~-~~~~~dl~~I~~ia~~~ga~livD~a-h~~Gli~~g~~~~p~ 302 (385)
..++ . +++.+|+++ +++ ++++|++..++ +|...|+++|.++|+++|+++++|.. +..|.. ..+-
T Consensus 179 ~~v~--~--~~~~~d~~~----i~~-~t~~v~i~~pn~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~-----~~~~ 244 (438)
T 1wyu_A 179 LTLP--L--EGGRTPLPE----VGE-EVGAVVVQNPNFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVL-----KPPG 244 (438)
T ss_dssp EEEC--C--BTTBCCCCC----CCT-TEEEEEEESSCTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTB-----CCHH
T ss_pred EEEc--C--cCCccCHHH----hCC-CeEEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechhhccCc-----CCCc
Confidence 5544 3 246777766 443 68888887663 35677999999999999999997754 544432 2222
Q ss_pred C-CCcEEEECCCc-----cCccccEEEEEEeCC
Q 016668 303 K-YCDVVTTTTHK-----SLRGPRGGMIFFKKD 329 (385)
Q Consensus 303 ~-gaDiv~~S~hK-----~l~GprgG~I~~~~~ 329 (385)
+ ++|++++|.|| ++.||++|+++++++
T Consensus 245 ~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~ 277 (438)
T 1wyu_A 245 AYGADIAVGDGQSLGLPMGFGGPHFGFLATKKA 277 (438)
T ss_dssp HHTCSEEEEECTTTTCCCGGGCSCCEEEEECGG
T ss_pred cCCCCEEEECCcccCCCccCCCCCeeEEEEcHH
Confidence 2 78999999777 678998899999874
No 209
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.55 E-value=7.8e-13 Score=133.04 Aligned_cols=238 Identities=13% Similarity=0.001 Sum_probs=135.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc----
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL---- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all---- 189 (385)
.+|.|.+++...+.. ... .+. ....+ .....+++++++++.+.+ .++++||++|+..++..+.
T Consensus 66 ~~p~v~~A~~~~~~~-~~~-~~~---~~~~~----~~~~la~~l~~~~~~~~~----v~~~~ggseA~~~al~~~~~~~~ 132 (452)
T 3n5m_A 66 GRKELAEAAYKQLQT-LSY-FPM---SQSHE----PAIKLAEKLNEWLGGEYV----IFFSNSGSEANETAFKIARQYYA 132 (452)
T ss_dssp CCHHHHHHHHHHHTT-CCC-CCT---TSEEH----HHHHHHHHHHHHHTSCEE----EEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cCC-ccc---ccCCH----HHHHHHHHHHHhCCCCce----EEEeCchHHHHHHHHHHHHHHHH
Confidence 379999999877643 211 111 11223 333455678888887652 3566788999999998887
Q ss_pred -c---CCCEEeecCCCCCccccCCc-ccccccc----ccCcceEEEEeccccCCCCCCC---------HHHHHHHhh---
Q 016668 190 -K---PHDRIMGLDLPHGGHLSHGF-MTPKRRV----SGTSIYFESMPYRLDESTGLVD---------YDMLEKTAI--- 248 (385)
Q Consensus 190 -~---pGD~Vl~~~~~~ggh~s~~~-~~~~~~~----~~~g~~~~~i~~~~~~~~~~iD---------~d~le~~i~--- 248 (385)
+ ++|+|++.++.+.|+..... .+..... .-....+..++.+.......-| +++|++.++
T Consensus 133 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~ 212 (452)
T 3n5m_A 133 QKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWEL 212 (452)
T ss_dssp TTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHC
T ss_pred hcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcC
Confidence 5 88999999886644310000 0000000 0000112223321110000112 899999886
Q ss_pred hcCCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccC-cc
Q 016668 249 LFRPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSL-RG 318 (385)
Q Consensus 249 ~~~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l-~G 318 (385)
..++++|+++++ +.|...+ +++|+++|+++|++||+|++|. |+...|.. . ...+ ..|+++ ++|++ .|
T Consensus 213 ~~~~~~vi~ep~~~n~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~g~~g~~~~~~~~~~~~di~t--~sK~l~~G 289 (452)
T 3n5m_A 213 SETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVIC-GFGRTGKAFGFMNYDVKPDIIT--MAKGITSA 289 (452)
T ss_dssp GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGTTCCCSEEE--ECGGGGTT
T ss_pred CCCEEEEEEccccCCCCeeeCCHHHHHHHHHHHHHcCCEEEEecchh-CCCcccccchhhhcCCCCCEEe--ecccccCC
Confidence 235678888765 3343444 9999999999999999999984 54333321 1 1112 356665 45987 46
Q ss_pred -ccEEEEEEeCCCCchhHHHHHHhh----cc-CCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 319 -PRGGMIFFKKDPVLGVELESAINN----AV-FPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 319 -prgG~I~~~~~~~~~~~~~~~i~~----~~-fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
++.|++++++ ++.+.+.. .. ..+...+.+....++..++|+.+..+++.
T Consensus 290 ~~~ig~~~~~~------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 344 (452)
T 3n5m_A 290 YLPLSATAVKR------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLI 344 (452)
T ss_dssp SSCCEEEEEEH------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred CcceEEEEECH------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 6779999987 67777643 11 11222233444455545577755444443
No 210
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.54 E-value=1e-13 Score=134.12 Aligned_cols=215 Identities=12% Similarity=0.091 Sum_probs=140.1
Q ss_pred hccccccCCCC--CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeec-CCcHH
Q 016668 103 KSLELIASENF--TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQP-LSGSP 179 (385)
Q Consensus 103 ~~l~Liasen~--~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~-~sGs~ 179 (385)
.-+++-.+++. +++.|++++...+.. ..+|+... + .++ ++++++++|++.+ +|.+ ++|++
T Consensus 16 ~~id~~~~~~~~~~~~~v~~a~~~~~~~--~~~y~~~~---~----~~l----r~~la~~~~~~~~----~i~~t~g~~~ 78 (350)
T 3fkd_A 16 EIVNFSTTVWTDGDKDHLEKHLVENLNC--IRHYPEPD---A----GTL----RQMLAKRNSVDNN----AILVTNGPTA 78 (350)
T ss_dssp CCEECSCCSCCCSCCHHHHHHHHHTGGG--GGSCCCTT---C----HHH----HHHHHHHTTCCGG----GEEEESHHHH
T ss_pred cEEEccCCCCCCCCCHHHHHHHHHhHhH--HhcCCCCc---H----HHH----HHHHHHHhCcCHH----HEEEcCCHHH
Confidence 34566545444 489999999877632 22455421 2 134 4578889998764 3444 44566
Q ss_pred HHHHHHHHhccCCCEEeecCCCCCccccCCccccccccccCcceEEEEeccc-cCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 180 ANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRL-DESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 180 A~~~a~~all~pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~-~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
|+..++.++. ||+|++.+|.|.++. ..+...|..+..++ + ++ .+.+++ .++|+|++.
T Consensus 79 al~~~~~~l~--gd~Vi~~~p~~~~~~--------~~~~~~g~~~~~v~--~~~~-~~~~~~---------~~~~~v~i~ 136 (350)
T 3fkd_A 79 AFYQIAQAFR--GSRSLIAIPSFAEYE--------DACRMYEHEVCFYP--SNED-IGEADF---------SNMDFCWLC 136 (350)
T ss_dssp HHHHHHHHTT--TCEEEEEESCCHHHH--------HHHHHTTCEEEEEE--TTSC-GGGSCC---------TTCSEEEEE
T ss_pred HHHHHHHHHC--CCEEEEeCCCcHHHH--------HHHHHcCCeEEEEe--cCCc-cccCcc---------CCCCEEEEe
Confidence 9998888887 999999988765432 13445676555444 4 32 123333 368998887
Q ss_pred CCCCC--CCCCHHHHHHHHHHcC-cEEEEeccccccccccCccc-CCCC--CCcEEEECCCccC--ccccEEEEEEeCCC
Q 016668 259 ASAYP--RDFDYPRMRQIADAVG-ALLMMDMAHISGLVAASVVA-DPFK--YCDVVTTTTHKSL--RGPRGGMIFFKKDP 330 (385)
Q Consensus 259 ~s~~~--~~~dl~~I~~ia~~~g-a~livD~ah~~Gli~~g~~~-~p~~--gaDiv~~S~hK~l--~GprgG~I~~~~~~ 330 (385)
.++|| ...+.+++.++++.++ .+|++|++|. ++...+... ..++ +.++++.|+||++ +|.|.|++++++
T Consensus 137 ~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~-~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~-- 213 (350)
T 3fkd_A 137 NPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYV-SFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK-- 213 (350)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTT-TSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--
T ss_pred CCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchh-hhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCH--
Confidence 77765 6789999999999886 7999999984 444333211 1222 3448899999986 577889999965
Q ss_pred CchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 331 VLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 331 ~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
++.+++.....+ .+++....++...+++.
T Consensus 214 ----~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 242 (350)
T 3fkd_A 214 ----DFMKRVAAFSTP---WAVNALAIEAAKFILIH 242 (350)
T ss_dssp ----HHHHHHHTTCCT---TCSCHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHhCCC---CCCCHHHHHHHHHHHhC
Confidence 688877765433 24555556666666654
No 211
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.54 E-value=6.1e-13 Score=132.59 Aligned_cols=224 Identities=16% Similarity=0.087 Sum_probs=133.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
.+|.|.+++...+..-. .|. + -. ......+++++++++ +.+ ..++++||++|+..++... ...
T Consensus 69 ~~p~v~~a~~~~~~~~~--~~~----~-~~----~~~~~la~~l~~~~~-~~~---~v~~~~ggsea~~~al~~a~~~~~ 133 (427)
T 3fq8_A 69 AHPEVIEALKVAMEKGT--SFG----A-PC----ALENVLAEMVNDAVP-SIE---MVRFVNSGTEACMAVLRIMRAYTG 133 (427)
T ss_dssp TCHHHHHHHHHHHTTCS--CCS----S-CC----HHHHHHHHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCC--CcC----C-CC----HHHHHHHHHHHHhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 48999999987764321 111 1 12 333345567888887 332 2456678899999988543 234
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEE-----------------EEeccccCCCCCCCHHHHHHHhhhc--CC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFE-----------------SMPYRLDESTGLVDYDMLEKTAILF--RP 252 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~-----------------~i~~~~~~~~~~iD~d~le~~i~~~--~p 252 (385)
+|+|++.++.+.|.... .....+.... +..++. -|+++|++.+++. ++
T Consensus 134 ~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~ 200 (427)
T 3fq8_A 134 RDKIIKFEGCYHGHADM-------FLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY------NDLEAVKALFAENPGEI 200 (427)
T ss_dssp CCEEEEEETCCCCSCGG-------GCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET------TCHHHHHHHHHHSTTTE
T ss_pred CCEEEEECCCcCCCCHH-------HHHhcCCcccccCCCCCCCCCCcccCceeecCC------CCHHHHHHHHHhCCCCE
Confidence 57888887765332111 0011111000 111111 1899999998763 56
Q ss_pred cEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccEE
Q 016668 253 KLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGG 322 (385)
Q Consensus 253 klIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~GprgG 322 (385)
++|++++.++ +...+ +++|+++|+++|++||+|++|. |+ ..|... ..+. ..|++++ +|+| +|.+.|
T Consensus 201 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-g~-~~g~~~~~~~~~~~~di~t~--sK~~~~G~~~G 276 (427)
T 3fq8_A 201 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVIT-GF-RIAYGGVQEKFGVTPDLTTL--GKIIGGGLPVG 276 (427)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-BT-TTBTTHHHHHTTCCCSEEEE--CGGGGTTSSCE
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-cc-ccCcchhhHhcCCCCChhhh--hhhhhCCcceE
Confidence 7888876432 34555 9999999999999999999985 66 333211 1122 3576655 4998 467889
Q ss_pred EEEEeCCCCchhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHhhCchHHHH
Q 016668 323 MIFFKKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y 375 (385)
++++++ ++.+.+... .+.+..-+.+....++...+++.+..+++.++
T Consensus 277 ~~~~~~------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~ 325 (427)
T 3fq8_A 277 AYGGKR------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEY 325 (427)
T ss_dssp EEEECH------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHH
T ss_pred EEEEcH------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence 998877 576666532 11111113355666666677877655555433
No 212
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.53 E-value=4.2e-13 Score=133.84 Aligned_cols=236 Identities=12% Similarity=-0.005 Sum_probs=134.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~p 191 (385)
.+|.|.+++...+... .. ....| ..+ .....+++++++++.+.+ ..++++||++|+..++..+. ..
T Consensus 60 ~~p~v~~a~~~~~~~~-~~--~~~~~--~~~----~~~~l~~~la~~~~~~~~---~v~~~~gg~ea~~~a~~~~~~~~~ 127 (433)
T 1zod_A 60 CHPEIVSVIGEYAGKL-DH--LFSEM--LSR----PVVDLATRLANITPPGLD---RALLLSTGAESNEAAIRMAKLVTG 127 (433)
T ss_dssp TCHHHHHHHHHHHHHC-CC--CCTTC--CCH----HHHHHHHHHHHHSCTTCC---EEEEESCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhC-cc--ccccc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 4799999998776532 11 11111 122 222344568889987653 23556678899999988653 34
Q ss_pred CCEEeecCCCCCccccC-------CccccccccccCcceEEEEeccccCC---------CCCCCHHHHHHHhhh---cCC
Q 016668 192 HDRIMGLDLPHGGHLSH-------GFMTPKRRVSGTSIYFESMPYRLDES---------TGLVDYDMLEKTAIL---FRP 252 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~-------~~~~~~~~~~~~g~~~~~i~~~~~~~---------~~~iD~d~le~~i~~---~~p 252 (385)
+|+|++.++.+.|.... .+.... .....| +..++++.... .+.+|+++|++.+++ .++
T Consensus 128 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~-~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~ 204 (433)
T 1zod_A 128 KYEIVGFAQSWHGMTGAAASATYSAGRKGV-GPAAVG--SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNL 204 (433)
T ss_dssp CCEEEEETTCCCCSSHHHHHTCCSSCCSSS-CCCCTT--EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCE
T ss_pred CCeEEEECCCcCCCChhHHhhcCCcccccc-CCCCCC--ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCe
Confidence 68999988765332110 000000 000112 33444321100 012479999998864 356
Q ss_pred cEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEE
Q 016668 253 KLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGG 322 (385)
Q Consensus 253 klIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG 322 (385)
++|++++.++ |...+ +++|+++|+++|++||+|++|. |+...|... ..+. ..|++ |++|+|. |.+.|
T Consensus 205 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~-~~g~~g~~~~~~~~~~~~di~--s~sK~~~~G~~ig 281 (433)
T 1zod_A 205 AAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQT-GVGRTGTMFACQRDGVTPDIL--TLSKTLGAGLPLA 281 (433)
T ss_dssp EEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSTHHHHTCCCSEE--EECHHHHTTSSCE
T ss_pred EEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcCchHhHHhhcCCCCCEE--EecccccCCCCee
Confidence 7888765432 43334 9999999999999999999985 443223211 0011 34665 5669984 56779
Q ss_pred EEEEeCCCCchhHHHHHHhhccCC--CccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 323 MIFFKKDPVLGVELESAINNAVFP--GLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 323 ~I~~~~~~~~~~~~~~~i~~~~fp--~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
++++++ ++.+.+....+. ...+ .+....++...+++.+.++++.+
T Consensus 282 ~~~~~~------~~~~~~~~~~~~~~~t~~-~~~~~~~a~~aal~~~~~~~~~~ 328 (433)
T 1zod_A 282 AIVTSA------AIEERAHELGYLFYTTHV-SDPLPAAVGLRVLDVVQRDGLVA 328 (433)
T ss_dssp EEEECH------HHHHHHHHTTCCCCCTTT-TCHHHHHHHHHHHHHHHHTTHHH
T ss_pred EEEEhH------HHHHhhccCCCCCCCCCC-cCHHHHHHHHHHHHHHHhCCHHH
Confidence 999987 677777653222 2232 34445555556776655445533
No 213
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.53 E-value=3.1e-13 Score=135.15 Aligned_cols=226 Identities=18% Similarity=0.134 Sum_probs=131.6
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceeecCCcHHHHHHHHHHh--cc
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg-~~~~~~~~~V~~~sGs~A~~~a~~al--l~ 190 (385)
.+|.|.+++...+.+....++ ..+ +....+++++++++ .+. .++++||++|+..++.+. +.
T Consensus 73 ~~~~v~~a~~~~~~~~~~~~~-------~~~----~~~~l~~~la~~~~~~~~-----v~~~~sgseA~~~al~~ar~~~ 136 (434)
T 2epj_A 73 KHPRVLEAVEEALARGWLYGA-------PGE----AEVLLAEKILGYVKRGGM-----IRFVNSGTEATMTAIRLARGYT 136 (434)
T ss_dssp TCHHHHHHHHHHHHTCSCCSS-------CCH----HHHHHHHHHHHHHCTTCE-----EEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------CCH----HHHHHHHHHHHhCCCCCE-----EEEeCCHHHHHHHHHHHHHHhh
Confidence 589999999888754211111 122 33335567888884 322 356778899999998872 44
Q ss_pred CCCEEeecCCCCCccccCCccccc-cc------cccCcce----EEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEE
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPK-RR------VSGTSIY----FESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIA 257 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~-~~------~~~~g~~----~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~ 257 (385)
++|+|++.++.+.|+.... .... .. ....|.. ...++++ ..|+++|++.+++ .++++|++
T Consensus 137 ~~~~vi~~~~~yhg~~~~~-~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ 209 (434)
T 2epj_A 137 GRDLILKFDGCYHGSHDAV-LVAAGSAAAHYGVPTSAGVPEAVARLTLVTP------YNDVEALERVFAEYGDRIAGVIV 209 (434)
T ss_dssp CCCEEEEEETCCCCSSGGG-SEECC------CEESSTTCCHHHHTTEEEEE------TTCHHHHHHHHHHHGGGEEEEEE
T ss_pred CCCeEEEEcCCcCCCCHHH-HHhcCCCccccCCCCCCCCCCcccCceEecC------CCCHHHHHHHHHhCCCCEEEEEE
Confidence 5678888877654321100 0000 00 0001210 0111211 1389999998864 25678888
Q ss_pred cCCC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEEEEe
Q 016668 258 GASA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFK 327 (385)
Q Consensus 258 ~~s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I~~~ 327 (385)
++.+ .|...+ +++|+++|+++|++||+|++|+ |+. .|... ..+. ..|++ |++|+|. |.++|+++++
T Consensus 210 ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~-~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~v~~~ 285 (434)
T 2epj_A 210 EPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFR-LGLEGAQGYFNIEGDII--VLGKIIGGGFPVGAVAGS 285 (434)
T ss_dssp CSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTT-SSTTHHHHHHTCCCSEE--EEEGGGGTTSSCEEEEEC
T ss_pred eCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-cee-CCcchhhHHhCCCCCee--eecchhcCCcceeeeeec
Confidence 6543 355667 9999999999999999999996 662 22110 1112 45775 5569985 4588999998
Q ss_pred CCCCchhHHHHHHhh-c-cCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 328 KDPVLGVELESAINN-A-VFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 328 ~~~~~~~~~~~~i~~-~-~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+ ++.+.+.. . .+.+..-+.+...+++...+|+.+.++++
T Consensus 286 ~------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~ 326 (434)
T 2epj_A 286 R------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPV 326 (434)
T ss_dssp H------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCH
T ss_pred H------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCH
Confidence 7 56666544 1 11111113445556666667776544444
No 214
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.53 E-value=5e-14 Score=139.22 Aligned_cols=227 Identities=10% Similarity=-0.028 Sum_probs=136.0
Q ss_pred hccccccCCCCCcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceee-cCCcHHHH
Q 016668 103 KSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQ-PLSGSPAN 181 (385)
Q Consensus 103 ~~l~Liasen~~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~-~~sGs~A~ 181 (385)
..+++.+++..+|+.|++++.... +. ..++. .+ +... .++.+.+++++++++|++..+ ..++ +.+|++|+
T Consensus 40 ~~~~~~~~~~~~~~~v~~a~~~~~-~~-~~~~~-~~---~~~~-~~~~~~~~~~la~~~g~~~~~--~i~~~t~g~t~al 110 (398)
T 2fyf_A 40 RDGRFGSGPSKVRLEQLQTLTTTA-AA-LFGTS-HR---QAPV-KNLVGRVRSGLAELFSLPDGY--EVILGNGGATAFW 110 (398)
T ss_dssp SSCBCCSSSCCCCHHHHHGGGTTT-TT-TTTSC-TT---SHHH-HHHHHHHHHHHHHHTTCCTTC--EEEEEETCHHHHH
T ss_pred CCccccCCCCCCCHHHHHHHhhcC-CC-ccCcC-cC---CHHH-HHHHHHHHHHHHHHhCCCCCc--eEEEeCCchhHHH
Confidence 456777888889999999987521 00 00100 11 2222 344455788999999997421 1233 56778899
Q ss_pred HHHHHHhccCC-CEEeecCCCCCccccCCccccccccccC--cceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEc
Q 016668 182 FEVYTAILKPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGT--SIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAG 258 (385)
Q Consensus 182 ~~a~~all~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~--g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~ 258 (385)
..++.++++|| |.| ....|+. ... ...... |..+..++ ++ +...+|. .+. .++|+|++.
T Consensus 111 ~~~~~~l~~~gv~~v--~~~~~~~----~~~---~~~~~~~~g~~~~~v~--~~-~g~~~~~-----~i~-~~~~~v~~~ 172 (398)
T 2fyf_A 111 DAAAFGLIDKRSLHL--TYGEFSA----KFA---SAVSKNPFVGEPIIIT--SD-PGSAPEP-----QTD-PSVDVIAWA 172 (398)
T ss_dssp HHHHHHTCSSCEEEE--ECSHHHH----HHH---HHHHHCTTSCCCEEEE--CC-TTCCCCC-----CCC-TTCSEEEEE
T ss_pred HHHHHHhcCCCeEEE--eCCHHHH----HHH---HHHHHhCCCCceEEEe--cC-CCCCCCc-----ccc-CCCCEEEEe
Confidence 99999999998 544 2222211 000 011222 44445555 33 2223332 133 378998876
Q ss_pred CCCC--CCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCCCCCcEEEECCCccCccc-cEEEEEEeCCCCchhH
Q 016668 259 ASAY--PRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKYCDVVTTTTHKSLRGP-RGGMIFFKKDPVLGVE 335 (385)
Q Consensus 259 ~s~~--~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~gaDiv~~S~hK~l~Gp-rgG~I~~~~~~~~~~~ 335 (385)
.+++ |...|+++|.++ +|+++++|++|..|.. +.+++.+|++++|+||++.++ +.|++++++ +
T Consensus 173 ~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~-----~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~------~ 238 (398)
T 2fyf_A 173 HNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGL-----PVDIAETDAYYFAPQKNFASDGGLWLAIMSP------A 238 (398)
T ss_dssp SEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTS-----CCCGGGCSEEEECTTSTTCSCSSEEEEEECH------H
T ss_pred CcCCCcceecchHHhhhh---cCCeEEEEeccccCCc-----ccCcccCcEEEEecCcccCCCCceEEEEECH------H
Confidence 5544 566788888777 8999999999965532 222335799999999998665 458888877 4
Q ss_pred HHHHHhhc---------cC-----------CCccCCChHHHHHHHHHHHHHhhCc
Q 016668 336 LESAINNA---------VF-----------PGLQGGPHNHTIGGLAVCLKHAQSP 370 (385)
Q Consensus 336 ~~~~i~~~---------~f-----------p~~qg~p~~~~iaala~Al~e~~~~ 370 (385)
+.+++... .+ ....++++...++++..+++.+.+.
T Consensus 239 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~ 293 (398)
T 2fyf_A 239 ALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGN 293 (398)
T ss_dssp HHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 55554221 00 1223567777777888888765443
No 215
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.51 E-value=2e-12 Score=130.68 Aligned_cols=240 Identities=13% Similarity=0.016 Sum_probs=135.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+.+. ...+.. ..+.. +.....+++++++++.+.+ -.++++||++|+..++.++.+
T Consensus 68 ~~p~v~~A~~~~~~~~-~~~~~~---~~~~~---~~~~~la~~l~~~~~~~~~---~v~~~~gGseA~~~al~~~~~~~~ 137 (460)
T 3gju_A 68 GRQKIADAIATQAKNL-AYYHAY---VGHGT---EASITLAKMIIDRAPKGMS---RVYFGLSGSDANETNIKLIWYYNN 137 (460)
T ss_dssp CCHHHHHHHHHHHHHH-SCCCCC---TTCCC---HHHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-cccccc---cccCC---HHHHHHHHHHHhhCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 3789999988776542 111221 11211 2333455678888876553 235567789999999988864
Q ss_pred -----CCCEEeecCCCCCccccCC----ccccc-cccccCcceEEEEeccc--cCCCCCCC--------HHHHHHHhhh-
Q 016668 191 -----PHDRIMGLDLPHGGHLSHG----FMTPK-RRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL- 249 (385)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~----~~~~~-~~~~~~g~~~~~i~~~~--~~~~~~iD--------~d~le~~i~~- 249 (385)
++|+|++.++.+.|+.... ..... .........+..++++. ..++...| +++|++.++.
T Consensus 138 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~ 217 (460)
T 3gju_A 138 VLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAE 217 (460)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhc
Confidence 5689999887653321100 00000 00001111233444222 10111123 6889888863
Q ss_pred --cCCcEEEEcCCCCC--CCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCcc
Q 016668 250 --FRPKLIIAGASAYP--RDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG 318 (385)
Q Consensus 250 --~~pklIi~~~s~~~--~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~G 318 (385)
.++++|++++.+++ ...+ +++|+++|+++|++||+|++|. |+...|... ..++ ..|++++ +|+|.|
T Consensus 218 ~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~g~~~~~~~~~~~pdi~t~--sK~l~g 294 (460)
T 3gju_A 218 GPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVT-GFGRLGTMFGSDHYGIKPDLITI--AKGLTS 294 (460)
T ss_dssp CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHHTCCCSEEEE--CGGGTT
T ss_pred CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeeee--ehhhcC
Confidence 35678888764432 2233 8999999999999999999984 543323211 0111 3467654 599966
Q ss_pred --ccEEEEEEeCCCCchhHHHHHHhhc------cCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 319 --PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 319 --prgG~I~~~~~~~~~~~~~~~i~~~------~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.|++++++ ++.+.+... ...+..-+.+....++..++|+.+..+++
T Consensus 295 G~~~lg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 350 (460)
T 3gju_A 295 AYAPLSGVIVAD------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDL 350 (460)
T ss_dssp TSSCCEEEEEEH------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred CCCCeEEEEECH------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence 7889999988 677777521 11122223344455555567776544444
No 216
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.50 E-value=2.8e-12 Score=127.95 Aligned_cols=231 Identities=16% Similarity=0.165 Sum_probs=130.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~p 191 (385)
.+|.|.+++...+.+....+|+ ++ .....+++++++++ ..+ ..++++||++|+..++.... .+
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~-------~~----~~~~la~~l~~~~~-~~~---~v~~~~sGsea~~~al~~a~~~~~ 134 (429)
T 4e77_A 70 NHPAIRQAVIEAVERGLSFGAP-------TE----MEVKMAQLVTDLVP-TMD---MVRMVNSGTEATMSAIRLARGYTG 134 (429)
T ss_dssp TCHHHHHHHHHHHTTCSCCSSC-------CH----HHHHHHHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCcccCCC-------CH----HHHHHHHHHHhhCC-CCC---EEEEeCcHHHHHHHHHHHHHHhhC
Confidence 4899999998877543221222 22 22234557888886 332 24567789999999987543 46
Q ss_pred CCEEeecCCCCCccccCCccc-cccc-----cccCcce----EEEEeccccCCCCCCCHHHHHHHhhhc--CCcEEEEcC
Q 016668 192 HDRIMGLDLPHGGHLSHGFMT-PKRR-----VSGTSIY----FESMPYRLDESTGLVDYDMLEKTAILF--RPKLIIAGA 259 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~-~~~~-----~~~~g~~----~~~i~~~~~~~~~~iD~d~le~~i~~~--~pklIi~~~ 259 (385)
+++|++.++.+.|........ .... ....+.. .....++ ..|+++|++.+++. ++++|++++
T Consensus 135 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep 208 (429)
T 4e77_A 135 RDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCT------YNDLASVRQAFEQYPQEVACIIVEP 208 (429)
T ss_dssp CCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEEC------TTCHHHHHHHHHHSTTTEEEEEECS
T ss_pred CCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecC------CCCHHHHHHHHHhcCCCEEEEEECC
Confidence 778888776543321100000 0000 0000000 0001110 23899999998753 456777764
Q ss_pred CC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccEEEEEEeCC
Q 016668 260 SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFFKKD 329 (385)
Q Consensus 260 s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~GprgG~I~~~~~ 329 (385)
.+ .+...+ +++|+++|+++|++||+|++|. |+ ..|... ..+. ..|++ |++|++ .|++.|++++++
T Consensus 209 ~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~-g~-r~g~~~~~~~~~~~pdi~--t~sK~~~~G~~~G~~~~~~- 283 (429)
T 4e77_A 209 VAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMT-GF-RVALAGAQDYYHVIPDLT--CLGKIIGGGMPVGAFGGRR- 283 (429)
T ss_dssp SBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTT-BT-TTBTTCHHHHTTCCCSEE--EEEGGGGTTSCCEEEEECH-
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-Cc-ccCcchHHHhcCCCCCee--eecccccCCCCeEEEEECH-
Confidence 42 233444 9999999999999999999985 65 322211 1122 34775 556998 466889998877
Q ss_pred CCchhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHhhCchHHHH
Q 016668 330 PVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVY 375 (385)
Q Consensus 330 ~~~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y 375 (385)
++.+.+... .+.+..-+.+...+++...+|+.+..+++.++
T Consensus 284 -----~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 326 (429)
T 4e77_A 284 -----EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYET 326 (429)
T ss_dssp -----HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHH
T ss_pred -----HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 566665432 11222223555666666678877655555433
No 217
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.49 E-value=7.1e-13 Score=134.37 Aligned_cols=239 Identities=12% Similarity=0.021 Sum_probs=136.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+.. ......+ ++ -.+ .....+++++++++.+.+ ..++++||++|+..++..+.+
T Consensus 92 ~~p~v~~A~~~~~~~-~~~~~~~-~~--~~~----~~~~L~e~la~~~~~~~~---~v~~~~sGseA~~~Alk~a~~~~~ 160 (457)
T 3tfu_A 92 GHPALDQALTTQLRV-MNHVMFG-GL--THE----PAARLAKLLVDITPAGLD---TVFFSDSGSVSVEVAAKMALQYWR 160 (457)
T ss_dssp TCHHHHHHHHHHHHH-CSCCCSS-SE--ECH----HHHHHHHHHHHHSSTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccc-cc--CCH----HHHHHHHHHHHhCCCCcC---EEEEeCcHHHHHHHHHHHHHHHHH
Confidence 489999999887754 2211111 11 122 223345678999976543 245667889999999988765
Q ss_pred ----CCC-EEeecCCCCCccccCC-cccc----c-cccccCcceEEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEE
Q 016668 191 ----PHD-RIMGLDLPHGGHLSHG-FMTP----K-RRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIA 257 (385)
Q Consensus 191 ----pGD-~Vl~~~~~~ggh~s~~-~~~~----~-~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~ 257 (385)
+|+ +|++.++.+.|..... ..+. . .........+..++++.+ .....|+++|++.+++ .++++|++
T Consensus 161 ~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~d~~~le~~l~~~~~~~aavi~ 239 (457)
T 3tfu_A 161 GRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPR-DYDPAYSAAFEAQLAQHAGELAAVVV 239 (457)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCS-SCCHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred hcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCc-ccCHHHHHHHHHHHHhCCCCEEEEEE
Confidence 665 8888776543321000 0000 0 000000011233333222 1123588999998863 35678888
Q ss_pred cC-CCC--CCCC----CHHHHHHHHHHcCcEEEEeccccccccccCcccCCC---C-CCcEEEECCCccCcc--ccEEEE
Q 016668 258 GA-SAY--PRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF---K-YCDVVTTTTHKSLRG--PRGGMI 324 (385)
Q Consensus 258 ~~-s~~--~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~---~-gaDiv~~S~hK~l~G--prgG~I 324 (385)
++ .++ +... .+++|+++|+++|++||+|++| .|+...|.. ..+ . ..|++ |++|.|.| ++.|++
T Consensus 240 ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~-~g~gr~G~~-~a~~~~~~~pdii--t~sK~l~gG~~~lG~v 315 (457)
T 3tfu_A 240 EPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIA-TGFGRTGAL-FAADHAGVSPDIM--CVGKALTGGYLSLAAT 315 (457)
T ss_dssp CSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSS-STHHHHTCCCSEE--EECGGGGTTSSCCEEE
T ss_pred eCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCc-cCCccccch-hHhHhcCCCceEE--EEChhhhCCCcceEEE
Confidence 76 333 3332 2899999999999999999997 454333321 111 1 45777 55699976 688999
Q ss_pred EEeCCCCchhHHHHHHhhc---c-CCCccCCChHHHHHHHHHHHHHhhCchHHH
Q 016668 325 FFKKDPVLGVELESAINNA---V-FPGLQGGPHNHTIGGLAVCLKHAQSPEFKV 374 (385)
Q Consensus 325 ~~~~~~~~~~~~~~~i~~~---~-fp~~qg~p~~~~iaala~Al~e~~~~~~~~ 374 (385)
++++ ++.+.+... . ..+..-+.+....++..++|+.+.++++.+
T Consensus 316 ~~~~------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~ 363 (457)
T 3tfu_A 316 LCTA------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRT 363 (457)
T ss_dssp EEEH------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHH
T ss_pred EEcH------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHH
Confidence 9988 677777421 1 111111334445555555777666665543
No 218
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.49 E-value=7.2e-13 Score=132.12 Aligned_cols=230 Identities=16% Similarity=0.093 Sum_probs=128.2
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCC-CCCCcceeecCCcHHHHHHHHHHhcc-CC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLD-ENKWGVNVQPLSGSPANFEVYTAILK-PH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~-~~~~~~~V~~~sGs~A~~~a~~all~-pG 192 (385)
+|.|.+++...+... .. +...+| ..+.. ...++++++++|.+ .+ -.+++++|++|+..++.++.. +|
T Consensus 61 ~p~v~~a~~~~~~~~-~~-~~~~~~--~~~~~----~~l~~~la~~~~~~~~~---~v~~~~gg~ea~~~ai~~~~~~~~ 129 (419)
T 2eo5_A 61 HPEVIKIGIEQMQKL-AH-AAANDF--YNIPQ----LELAKKLVTYSPGNFQK---KVFFSNSGTEAIEASIKVVKNTGR 129 (419)
T ss_dssp CHHHHHHHHHHHTTS-CC-CSCSCS--CCHHH----HHHHHHHHHHSSCSSCE---EEEEESSHHHHHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHhhC-cc-cccccc--CCHHH----HHHHHHHHHhCCCCcCC---EEEEeCchHHHHHHHHHHHHHhhC
Confidence 799999998877432 11 111112 12222 22345788999986 42 134456678899999987654 49
Q ss_pred CEEeecCCCCCccccCCc-cc----ccc-ccccCcceEEEEeccccCCC--CC-----------CCHHHHH-HHhhh---
Q 016668 193 DRIMGLDLPHGGHLSHGF-MT----PKR-RVSGTSIYFESMPYRLDEST--GL-----------VDYDMLE-KTAIL--- 249 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~-~~----~~~-~~~~~g~~~~~i~~~~~~~~--~~-----------iD~d~le-~~i~~--- 249 (385)
|+|++.+|.+.|...... .. ... ........+..++++-+... +. +|+++|+ +.+++
T Consensus 130 ~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~ 209 (419)
T 2eo5_A 130 KYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVP 209 (419)
T ss_dssp CEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCC
T ss_pred CcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccC
Confidence 999999986533211000 00 000 00001112344443211000 11 4788999 88864
Q ss_pred -cCCcEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcc-c-CCCC-CCcEEEECCCccCc-c
Q 016668 250 -FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVV-A-DPFK-YCDVVTTTTHKSLR-G 318 (385)
Q Consensus 250 -~~pklIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~-~-~p~~-gaDiv~~S~hK~l~-G 318 (385)
.++++|++++.++ |...+ +++|+++|+++|++||+|++|. |+...|.. . ..+. ..|++ |++|+|. |
T Consensus 210 ~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~-~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~G 286 (419)
T 2eo5_A 210 PEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQM-GLGRTGKLFAIENFNTVPDVI--TLAKALGGG 286 (419)
T ss_dssp GGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTT
T ss_pred CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc-CCccCcchhhHHhcCCCCCEE--EecccccCC
Confidence 3556788765433 43444 9999999999999999999984 44333321 1 1112 45666 5669985 4
Q ss_pred -ccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHh
Q 016668 319 -PRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 319 -prgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
.+.|+++++++ +. .+ .....+.. +.+...++|...+|+.+
T Consensus 287 ~~riG~~~~~~~------~~-~~-~~~~~~t~-~~n~~~~~aa~aal~~~ 327 (419)
T 2eo5_A 287 IMPIGATIFRKD------LD-FK-PGMHSNTF-GGNALACAIGSKVIDIV 327 (419)
T ss_dssp TSCCEEEEEEGG------GC-CC-------CC-CCCHHHHHHHHHHHHHH
T ss_pred ccceEEEEEchH------hh-cC-CcccCCCC-CCCHHHHHHHHHHHHHH
Confidence 67799999874 33 33 21112222 23445556666677654
No 219
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.49 E-value=8e-13 Score=132.08 Aligned_cols=220 Identities=15% Similarity=0.092 Sum_probs=127.6
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--C
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--p 191 (385)
.+|.|.+++...+.+....+|+ .+...+ .+++++++++ ..+ ..++++||++|+..++..+.. +
T Consensus 70 ~~p~v~~A~~~~~~~~~~~~~~-------~~~~~~----l~~~la~~~~-~~~---~v~~~~~Gsea~~~ai~~a~~~~~ 134 (429)
T 3k28_A 70 ANDRVVEALKAVAERGTSFGAP-------TEIENK----LAKLVIERVP-SIE---IVRMVNSGTEATMSALRLARGYTG 134 (429)
T ss_dssp SCHHHHHHHHHHHHHCSCCSSC-------CHHHHH----HHHHHHHHST-TCS---EEEEESSHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhCcCcCCC-------CHHHHH----HHHHHHHhCC-CCC---EEEEeCChHHHHHHHHHHHHHhhC
Confidence 4899999998777543221222 222223 3456788885 232 245667899999999987754 7
Q ss_pred CCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCC-------------CCHHHHHHHhhh--cCCcEEE
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGL-------------VDYDMLEKTAIL--FRPKLII 256 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~-------------iD~d~le~~i~~--~~pklIi 256 (385)
+|+|++.++.+.|+... .+...|.......++. ..+. -|++++++.++. .++++|+
T Consensus 135 ~~~vi~~~~~yhg~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi 205 (429)
T 3k28_A 135 RNKILKFIGCYHGHGDS-------LLIKAGSGVATLGLPD--SPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVI 205 (429)
T ss_dssp CCEEEEEETCCCCSCGG-------GCSSCCTTC-----CC--CTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEE
T ss_pred CCEEEEECCCcCCCcHH-------HHHhcCCcccccCCCC--cCCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEE
Confidence 78999887755332110 1111221111111100 0111 289999998864 2456777
Q ss_pred EcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccEEEEEE
Q 016668 257 AGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRGGMIFF 326 (385)
Q Consensus 257 ~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~GprgG~I~~ 326 (385)
+++.+. +...+ +++|+++|+++|++||+|++| .|+ ..|... ..++ ..|+++ ++|+| .|++.|++++
T Consensus 206 ~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~-~g~-~~g~~~~~~~~~~~~di~t--~sK~~~~G~~iG~~~~ 281 (429)
T 3k28_A 206 VEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVM-TGF-RVAYNCGQGYYGVTPDLTC--LGKVIGGGLPVGAYGG 281 (429)
T ss_dssp ECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTT-TSSTTHHHHHHTCCCSEEE--ECGGGGTTSCCEEEEE
T ss_pred EcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccc-ccc-ccCcchHHHHhCCCCceeh--hhhhhcCCCCeEEEEE
Confidence 765432 33445 999999999999999999998 565 333211 1112 346665 56998 4578899998
Q ss_pred eCCCCchhHHHHHHhhc--cCCCccCCChHHHHHHHHHHHHHh
Q 016668 327 KKDPVLGVELESAINNA--VFPGLQGGPHNHTIGGLAVCLKHA 367 (385)
Q Consensus 327 ~~~~~~~~~~~~~i~~~--~fp~~qg~p~~~~iaala~Al~e~ 367 (385)
++ ++.+.+... .+.+...+.+....++..++++.+
T Consensus 282 ~~------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~ 318 (429)
T 3k28_A 282 KA------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQL 318 (429)
T ss_dssp CH------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTC
T ss_pred cH------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHH
Confidence 87 576666432 122222234455555555577644
No 220
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.48 E-value=1.2e-12 Score=132.25 Aligned_cols=238 Identities=11% Similarity=-0.014 Sum_probs=134.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+.+. ...++..++ .. +.....+++++++++.+.+ -.++++||++|+..++..+.+
T Consensus 67 ~~p~v~~A~~~~~~~~-~~~~~~~~~--~~----~~~~~la~~l~~~~~~~~~---~v~~~~ggseA~~~al~~~~~~~~ 136 (459)
T 4a6r_A 67 GRKDFAEAARRQMEEL-PFYNTFFKT--TH----PAVVELSSLLAEVTPAGFD---RVFYTNSGSESVDTMIRMVRRYWD 136 (459)
T ss_dssp CCHHHHHHHHHHHHHC-SCCCTTSSS--CC----HHHHHHHHHHHHHSCTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhc-ccccccccc--CC----HHHHHHHHHHHHhCCCCCC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 3799999998777542 112222111 12 3333456688899987653 235567788999999998875
Q ss_pred -----CCCEEeecCCCCCccccCC----ccccc-cccccCcceEEEEeccc--cCCCCCCC--------HHHHHHHhhh-
Q 016668 191 -----PHDRIMGLDLPHGGHLSHG----FMTPK-RRVSGTSIYFESMPYRL--DESTGLVD--------YDMLEKTAIL- 249 (385)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~----~~~~~-~~~~~~g~~~~~i~~~~--~~~~~~iD--------~d~le~~i~~- 249 (385)
++|+|++.++.+.|+.... ..... .........+..++++. ..... .| +++|++.++.
T Consensus 137 ~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~ 215 (459)
T 4a6r_A 137 VQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEI 215 (459)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHc
Confidence 5799999887654331000 00000 00000111223343222 10111 45 7889988863
Q ss_pred --cCCcEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCcc
Q 016668 250 --FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLRG 318 (385)
Q Consensus 250 --~~pklIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~G 318 (385)
.++++|++++.+. +...+ +++|+++|+++|++||+|++|. |+...|... ..++ ..|++++ +|+|.|
T Consensus 216 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~-g~gr~G~~~~~~~~~~~pdi~t~--sK~l~g 292 (459)
T 4a6r_A 216 GADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVIC-GFGRTGEWFGHQHFGFQPDLFTA--AKGLSS 292 (459)
T ss_dssp CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSHHHHHTCCCSEEEE--CGGGGT
T ss_pred CCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccc-CCCcccccchHhhcCCCCCeeeh--hhhhcC
Confidence 3456777765432 23333 8999999999999999999984 543333211 0112 3577765 599865
Q ss_pred --ccEEEEEEeCCCCchhHHHHHHhhc---cCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 319 --PRGGMIFFKKDPVLGVELESAINNA---VFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 319 --prgG~I~~~~~~~~~~~~~~~i~~~---~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
++.|++++++ ++.+.+... ......+ .+....++...+|+.+..+++
T Consensus 293 g~~~lg~v~~~~------~i~~~~~~~~~~~~~~t~~-~~~~~~aaa~aal~~~~~~~~ 344 (459)
T 4a6r_A 293 GYLPIGAVFVGK------RVAEGLIAGGDFNHGFTYS-GHPVCAAVAHANVAALRDEGI 344 (459)
T ss_dssp TSSCCEEEEECH------HHHHHHHHHCTTHHHHHHC-SCHHHHHHHHHHHHHHHHTCH
T ss_pred CCCCccceeeCH------HHHHHhhcCCCcccCCCCC-CCHHHHHHHHHHHHHHhcchH
Confidence 7889999887 677766521 1111222 333444444557775544444
No 221
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.48 E-value=1e-12 Score=130.91 Aligned_cols=224 Identities=15% Similarity=0.067 Sum_probs=128.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHH--hccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA--ILKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~a--ll~p 191 (385)
.+|.|.+++...+.... .+. + -. +++...+++++++++ +.+ ..++++||++|+..++.. .+.+
T Consensus 69 ~~p~v~~a~~~~~~~~~--~~~---~--~~----~~~~~l~~~l~~~~~-~~~---~v~~~~~g~ea~~~al~~ar~~~~ 133 (424)
T 2e7u_A 69 AHPKVLARVRETLERGL--TFG---A--PS----PLEVALAKKVKRAYP-FVD---LVRFVNSGTEATMSALRLARGYTG 133 (424)
T ss_dssp TCHHHHHHHHHHHHTCS--CCS---S--CC----HHHHHHHHHHHHHCT-TCC---EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCC--CCC---C--CC----HHHHHHHHHHHHhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 58999999988775421 111 1 11 333445567888885 332 135567789999998885 2345
Q ss_pred CCEEeecCCCCCccccCCcc-cccc--c---cccCcce----EEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcC
Q 016668 192 HDRIMGLDLPHGGHLSHGFM-TPKR--R---VSGTSIY----FESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGA 259 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~-~~~~--~---~~~~g~~----~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~ 259 (385)
+|+|++.++.+.|+...... .... . ....|.. ...+.++ ..|+++|++.+++ .++++|++++
T Consensus 134 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep 207 (424)
T 2e7u_A 134 RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLE------YNDPEGLREVLKRRGEEIAAIIFEP 207 (424)
T ss_dssp CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEEC------TTCHHHHHHHHHHHGGGEEEEEECS
T ss_pred CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCC------CCCHHHHHHHHHhCCCCEEEEEEeC
Confidence 57888888765442110000 0000 0 0011110 0111211 1489999998864 3567788765
Q ss_pred CC--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEEEEeCC
Q 016668 260 SA--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKD 329 (385)
Q Consensus 260 s~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~ 329 (385)
.+ .|...+ +++|+++ +++|++||+|++|. |+. .|... ..+. ..|++ |++|+|. |.++|++++++
T Consensus 208 ~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~-~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~~~~~~- 281 (424)
T 2e7u_A 208 VVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFR-LAFGGATELLGLKPDLV--TLGKILGGGLPAAAYAGRR- 281 (424)
T ss_dssp SBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTT-SSTTHHHHHHTCCCSEE--EECGGGGTTSSCEEEEECH-
T ss_pred CCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccc-cchhHHHHHhCCCcchh--hhhhhhhCCcceEEEEEcH-
Confidence 33 355566 9999999 99999999999996 663 22210 1112 35765 6679985 46889999987
Q ss_pred CCchhHHHHHHhh-c-cCCCccCCChHHHHHHHHHHHHHhhC
Q 016668 330 PVLGVELESAINN-A-VFPGLQGGPHNHTIGGLAVCLKHAQS 369 (385)
Q Consensus 330 ~~~~~~~~~~i~~-~-~fp~~qg~p~~~~iaala~Al~e~~~ 369 (385)
++.+.+.. . .+.+..-+.+....++...+++.+.+
T Consensus 282 -----~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 318 (424)
T 2e7u_A 282 -----EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE 318 (424)
T ss_dssp -----HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH
T ss_pred -----HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 56666654 1 11111213344555555567765543
No 222
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.48 E-value=2.2e-12 Score=129.82 Aligned_cols=229 Identities=12% Similarity=-0.010 Sum_probs=129.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+.. ....++. ....+ .....+++++++++.+.+ -.++++||++|+..++.++.+
T Consensus 61 ~~p~v~~A~~~~~~~-~~~~~~~---~~~~~----~~~~la~~l~~~~~~~~~---~v~~~~sGseA~~~al~~~~~~~~ 129 (448)
T 3dod_A 61 RKKELDDAIKKQLGK-IAHSTLL---GMTNV----PATQLAETLIDISPKKLT---RVFYSDSGAEAMEIALKMAFQYWK 129 (448)
T ss_dssp SCHHHHHHHHHHHTT-CSCCCCS---SSEEH----HHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccc---ccCCH----HHHHHHHHHHHhCCCCCC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 479999999877643 2211111 11223 333355678888865542 245667889999999988865
Q ss_pred -CC----CEEeecCCCCCccccCCccccccccccCcc------------eEEEEeccccCCCC-----------CCCHHH
Q 016668 191 -PH----DRIMGLDLPHGGHLSHGFMTPKRRVSGTSI------------YFESMPYRLDESTG-----------LVDYDM 242 (385)
Q Consensus 191 -pG----D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~------------~~~~i~~~~~~~~~-----------~iD~d~ 242 (385)
+| |+|++.++.+.|+... .+...+. .+..++++ +.. ..|+++
T Consensus 130 ~~G~~~~~~vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~ 199 (448)
T 3dod_A 130 NIGKPEKQKFIAMKNGYHGDTIG-------AVSVGSIELFHHVYGPLMFESYKAPIP---YVYRSESGDPDECRDQCLRE 199 (448)
T ss_dssp HTTCTTCCEEEEEC------------------------------------CEEECCC---CCTTSSSCCHHHHHHHHHHH
T ss_pred hhCCCCCCEEEEECCCCCCccHH-------HHHhcCCccccccccCCCCCceEeCCC---ccccCCccchhhhhHHHHHH
Confidence 55 9999998765332110 1111111 11222211 111 125899
Q ss_pred HHHHhh--hcCCcEEEEcCCC-C--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEE
Q 016668 243 LEKTAI--LFRPKLIIAGASA-Y--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (385)
Q Consensus 243 le~~i~--~~~pklIi~~~s~-~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~ 310 (385)
|++.++ ..++++|++++.+ + +...+ +++|+++|+++|++||+|++|. |+...|... ..++ ..|++++
T Consensus 200 le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~-g~g~~g~~~a~~~~~~~~di~t~ 278 (448)
T 3dod_A 200 LAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVAT-GFGRTGKMFACEHENVQPDLMAA 278 (448)
T ss_dssp HHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEEEE
T ss_pred HHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEecccc-CCCcccchhhhhhcCCCCCEEEe
Confidence 999886 2346778877643 2 22222 8999999999999999999984 543333211 1112 3566654
Q ss_pred CCCccC-cc-ccEEEEEEeCCCCchhHHHHHHhhc------cCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 311 TTHKSL-RG-PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 311 S~hK~l-~G-prgG~I~~~~~~~~~~~~~~~i~~~------~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+|+| .| .+.|++++++ ++.+.+... ...+...+.+....++...+|+.+..+++
T Consensus 279 --sK~l~~G~~~ig~v~~~~------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 340 (448)
T 3dod_A 279 --GKGITGGYLPIAVTFATE------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENI 340 (448)
T ss_dssp --CGGGGTTSSCCEEEEEEH------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred --cccccCCcCceEEEEECH------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccH
Confidence 5998 45 3889999987 677776540 11122223344555555567776544444
No 223
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.48 E-value=6.1e-13 Score=133.86 Aligned_cols=226 Identities=13% Similarity=0.092 Sum_probs=128.5
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHH---hcc
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTA---ILK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~a---ll~ 190 (385)
.+|.|.+++...+.... .+ ++. .++++..+++++++++ +.+ ..++++||++|+..++.+ +.+
T Consensus 74 ~~~~v~~a~~~~~~~~~--~~------~~~---~~~~~~la~~l~~~~~-~~~---~v~~~~gg~eA~~~al~~ar~~~~ 138 (453)
T 2cy8_A 74 GHPRVNAAIAEALSHGV--QY------AAS---HPLEVRWAERIVAAFP-SIR---KLRFTGSGTETTLLALRVARAFTG 138 (453)
T ss_dssp TCHHHHHHHHHHHTTTC--SS------CSS---CHHHHHHHHHHHHHCT-TCS---EEEEESCHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhCC--CC------CCC---CHHHHHHHHHHHhhCC-CCC---EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 68999999988775421 11 111 2566667788888886 332 235667888999999887 555
Q ss_pred CCCEEeecCCCCCccccCCccccccc----cccCcceE----EEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRR----VSGTSIYF----ESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGAS 260 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~----~~~~g~~~----~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s 260 (385)
+|+|++.++.|.|+..... ..... ....|... ....++ ..|+++|++.+++ .++++|++++.
T Consensus 139 -~~~vi~~~~~yhg~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~~vi~ep~ 210 (453)
T 2cy8_A 139 -RRMILRFEGHYHGWHDFSA-SGYNSHFDGQPAPGVLPETTANTLLIR------PDDIEGMREVFANHGSDIAAFIAEPV 210 (453)
T ss_dssp -CCEEEEECC-----------------------------CGGGEEEEC------TTCHHHHHHHHHHHGGGEEEEEECSS
T ss_pred -CCEEEEEcCCcCCCchhhH-hhcCCccCCCcCCCCCccccCceeecC------CCCHHHHHHHHHhcCCCEEEEEECCC
Confidence 4678777765533211000 00000 00011100 011111 1489999998864 25678887654
Q ss_pred C--CCCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-cccEEEEEEeCCC
Q 016668 261 A--YPRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDP 330 (385)
Q Consensus 261 ~--~~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~ 330 (385)
. .|...+ +++|+++|+++|++||+|++|. |+ ..|... ..+. ..|++ |++|+|. |+++|++++++
T Consensus 211 ~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~-~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~v~~~~-- 284 (453)
T 2cy8_A 211 GSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GF-RVGNHGMQALLDVQPDLT--CLAKASAGGLPGGILGGRE-- 284 (453)
T ss_dssp EHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TT-TTCTTHHHHHHTCCCSEE--EEEGGGGTTSSCEEEEECH--
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-cc-ccCchhhhHHhCCCCcEE--EEChhhhCCcceEEEechH--
Confidence 3 244556 9999999999999999999995 76 323211 1112 35766 5669995 57899999987
Q ss_pred CchhHHHHHHhh---c-cCCCccCCChHHHHHHHHHHHHH-hhCchHH
Q 016668 331 VLGVELESAINN---A-VFPGLQGGPHNHTIGGLAVCLKH-AQSPEFK 373 (385)
Q Consensus 331 ~~~~~~~~~i~~---~-~fp~~qg~p~~~~iaala~Al~e-~~~~~~~ 373 (385)
++.+.+.. . .+.+..-+.++...++...+|+. + .+++.
T Consensus 285 ----~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~~~~~ 327 (453)
T 2cy8_A 285 ----DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-EDDVC 327 (453)
T ss_dssp ----HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-HTTHH
T ss_pred ----HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-hhhHH
Confidence 56665543 1 11111123445555666667776 5 34443
No 224
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.47 E-value=5.3e-12 Score=128.57 Aligned_cols=243 Identities=11% Similarity=-0.017 Sum_probs=138.1
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+.. ...+++. .+ ..+ .....+++++++++.+.+ -.++++||++|+..++..+.+
T Consensus 71 ~~p~v~~A~~~~l~~-~~~~~~~-~~--~~~----~~~~la~~l~~~~~~~~~---~v~~~~sGseA~~~Aik~a~~~~~ 139 (476)
T 3i5t_A 71 GRREIVDAMAHQAMV-LPYASPW-YM--ATS----PAARLAEKIATLTPGDLN---RIFFTTGGSTAVDSALRFSEFYNN 139 (476)
T ss_dssp CCHHHHHHHHHHHHH-CCCCCTT-TC--BCH----HHHHHHHHHHTTSSTTCC---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-ccCcccC-cc--CCH----HHHHHHHHHHhcCCCCcC---EEEEeCchHHHHHHHHHHHHHHHH
Confidence 489999999887653 3323321 11 223 333455678888865543 135667899999999988763
Q ss_pred -----CCCEEeecCCCCCccccCCc-cccccc----cccCcceEEEEeccccCCCCCCC--------HHHHHHHhhh---
Q 016668 191 -----PHDRIMGLDLPHGGHLSHGF-MTPKRR----VSGTSIYFESMPYRLDESTGLVD--------YDMLEKTAIL--- 249 (385)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~~-~~~~~~----~~~~g~~~~~i~~~~~~~~~~iD--------~d~le~~i~~--- 249 (385)
.+++|++.++.+.|+..-.. .+.... .......+..++++........| +++|++.++.
T Consensus 140 ~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 219 (476)
T 3i5t_A 140 VLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGP 219 (476)
T ss_dssp HTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCG
T ss_pred hcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCC
Confidence 36789988876533210000 000000 00001112333332211111122 7889988863
Q ss_pred cCCcEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--C-CCC-CCcEEEECCCccCcc-
Q 016668 250 FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--D-PFK-YCDVVTTTTHKSLRG- 318 (385)
Q Consensus 250 ~~pklIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~-p~~-gaDiv~~S~hK~l~G- 318 (385)
.++++|+++++.. +...+ +++|+++|+++|++||+|++|. |+...|... . .+. ..|++++| |+|.|
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~-g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~G 296 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVT-GFGRCGEWFASEKVFGVVPDIITFA--KGVTSG 296 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSCHHHHTTCCCCSEEEEC--GGGGTT
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccCceeeecccCCCcchhhhh--hhhcCC
Confidence 3467888876533 22233 8999999999999999999984 553333221 1 222 45777654 99854
Q ss_pred -ccEEEEEEeCCCCchhHHHHHHhhc------cCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 319 -PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 319 -prgG~I~~~~~~~~~~~~~~~i~~~------~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
++.|++++++ ++.+.+... ...+..-+.++...+|..++|+.+.++++.++.
T Consensus 297 ~~plg~v~~~~------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~ 355 (476)
T 3i5t_A 297 YVPLGGLAISE------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQA 355 (476)
T ss_dssp SSCCEEEEECH------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CcCeEEEEECH------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6888999877 677777543 122222233445555556678766555554433
No 225
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.44 E-value=3.9e-12 Score=129.46 Aligned_cols=232 Identities=14% Similarity=0.040 Sum_probs=134.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--- 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--- 190 (385)
.+|.|.+++...+.. ....+...++ ..+ .....+++++++++.+.+ -.++++||++||..++..+.+
T Consensus 72 ~~p~v~~A~~~~~~~-~~~~~~~~~~--~~~----~~~~lae~l~~~~~~~~~---~v~~~~sGseA~~~aik~a~~~~~ 141 (472)
T 3hmu_A 72 GRDELAEVAARQMRE-LPYYNTFFKT--THV----PAIALAQKLAELAPGDLN---HVFFAGGGSEANDTNIRMVRTYWQ 141 (472)
T ss_dssp CCHHHHHHHHHHHHH-CSCCCSSSSE--ECH----HHHHHHHHHHHHSCTTEE---EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh-cccccccccc--CCH----HHHHHHHHHHHhCCCCCC---EEEEeCCHHHHHHHHHHHHHHHHH
Confidence 379999999887754 2212222111 123 333345678888876543 235567889999999988865
Q ss_pred -----CCCEEeecCCCCCccccCCccccccccccCc-----------ceEEEEeccc--cCCCCCCC--------HHHHH
Q 016668 191 -----PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----------IYFESMPYRL--DESTGLVD--------YDMLE 244 (385)
Q Consensus 191 -----pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-----------~~~~~i~~~~--~~~~~~iD--------~d~le 244 (385)
++++|++.++.+.|+. .. .....+ ..+..++++. ....+ .| +++|+
T Consensus 142 ~~g~~~~~~ii~~~~~yHg~t-----~~--~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le 213 (472)
T 3hmu_A 142 NKGQPEKTVIISRKNAYHGST-----VA--SSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELE 213 (472)
T ss_dssp HTTCTTCCEEEEETTCCCCSS-----HH--HHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHH
T ss_pred hcCCCCCCEEEEEcCcCCCcc-----HH--hhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHH
Confidence 5789998887653321 00 111111 0233344222 10011 34 78888
Q ss_pred HHhhh---cCCcEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECC
Q 016668 245 KTAIL---FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTT 312 (385)
Q Consensus 245 ~~i~~---~~pklIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~ 312 (385)
+.+++ .++++|++++.+. +...+ +++|+++|+++|++||+|++| .|+...|... ..+. ..|++++|
T Consensus 214 ~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~-~gfgr~G~~~a~~~~~v~pdi~t~s- 291 (472)
T 3hmu_A 214 EAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVI-CGFGRTGNWFGTQTMGIRPHIMTIA- 291 (472)
T ss_dssp HHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTT-TTTTTTSSSCHHHHHTCCCSEEEEC-
T ss_pred HHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccc-cCCcccCccchhHHhCCCCceeeec-
Confidence 88863 3456788865432 23344 899999999999999999998 4543333211 1112 35777654
Q ss_pred CccCcc--ccEEEEEEeCCCCchhHHHHHHhhccC-CCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 313 HKSLRG--PRGGMIFFKKDPVLGVELESAINNAVF-PGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 313 hK~l~G--prgG~I~~~~~~~~~~~~~~~i~~~~f-p~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|+|.| ++.|++++++ ++.+.++...+ .+..-+.+....+|..++|+.+.++++
T Consensus 292 -K~l~gg~~plG~v~~~~------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~ 347 (472)
T 3hmu_A 292 -KGLSSGYAPIGGSIVCD------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENI 347 (472)
T ss_dssp -GGGTTTSSCCEEEEEEH------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred -hhhhcCCcceEEEEECH------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHH
Confidence 99965 7889999987 67777743221 121222334445554557776544444
No 226
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.42 E-value=1e-11 Score=125.38 Aligned_cols=239 Identities=13% Similarity=0.038 Sum_probs=129.7
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhcc--C
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILK--P 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all~--p 191 (385)
.+|.|.+++...+..- .. +....+ -. +.....+++++++++.+..+ ..++++||++|+..++..+.. .
T Consensus 78 ~~p~v~~A~~~~~~~~-~~-~~~~~~--~~----~~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~g 147 (451)
T 3oks_A 78 SAPKVVEAVRSQVGDF-TH-TCFMVT--PY----EGYVAVCEQLNRLTPVRGDK--RSALFNSGSEAVENAVKIARSHTH 147 (451)
T ss_dssp TCHHHHHHHHHHHTTC-SC-CTTTTS--CC----HHHHHHHHHHHHHSSCCSSE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc-cc-ccCCcc--CC----HHHHHHHHHHHHhCCcCCCC--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 3799999998776432 11 111111 12 23334556788888754211 245667899999999977653 4
Q ss_pred CCEEeecCCCCCccccCCc-cc----cc-cccccCcceEEEEeccc---------cCCC-CCCCHHHHHHHhhh----cC
Q 016668 192 HDRIMGLDLPHGGHLSHGF-MT----PK-RRVSGTSIYFESMPYRL---------DEST-GLVDYDMLEKTAIL----FR 251 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~-~~----~~-~~~~~~g~~~~~i~~~~---------~~~~-~~iD~d~le~~i~~----~~ 251 (385)
+|+|++.++.+.|+..... .+ .. .........+..++++. +.+. ...+++.+++.++. .+
T Consensus 148 ~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~ 227 (451)
T 3oks_A 148 KPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADN 227 (451)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGG
T ss_pred CCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCC
Confidence 5889988876543311000 00 00 00000111234444431 1000 01234555454432 34
Q ss_pred CcEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccC-ccccE
Q 016668 252 PKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSL-RGPRG 321 (385)
Q Consensus 252 pklIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l-~Gprg 321 (385)
+++|++++.+. +...+ +++|+++|++||++||+|++|. |+...|... ..++ ..|++ |++|+| .|++.
T Consensus 228 ~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~i 304 (451)
T 3oks_A 228 LAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQT-GFARTGAMFACEHEGIDPDLI--VTAKGIAGGLPL 304 (451)
T ss_dssp EEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSGGGGGTCCCSEE--EECGGGGTTSSC
T ss_pred EEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEeccc-CCCccccchhhhhcCCCCCee--eehhhhhCCcce
Confidence 56777765321 22333 8999999999999999999984 553333211 1112 35676 455998 56788
Q ss_pred EEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 322 GMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 322 G~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
|++++++ ++.+.+.........++ +....++...+|+.+..+++
T Consensus 305 G~v~~~~------~~~~~~~~~~~~~t~~~-~~~~~aaa~aal~~~~~~~~ 348 (451)
T 3oks_A 305 SAVTGRA------EIMDSPHVSGLGGTYGG-NPIACAAALATIETIESEGL 348 (451)
T ss_dssp EEEEEEH------HHHTCSCTTSBCCSSSS-CHHHHHHHHHHHHHHHHTTH
T ss_pred EEEEECH------HHHhhhcCCCcCCCCCC-CHHHHHHHHHHHHHHhhhhH
Confidence 9999887 57666654333333333 33444444456765544444
No 227
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.42 E-value=4.8e-12 Score=127.92 Aligned_cols=238 Identities=16% Similarity=0.049 Sum_probs=129.4
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~p 191 (385)
.+|.|.+++...+..- . .+....+ -. +.....+++++++++.+..+ ..++++||++|+..++..+. ..
T Consensus 81 ~~p~v~~A~~~~~~~~-~-~~~~~~~--~~----~~~~~la~~l~~~~~~~~~~--~v~~~~sGseA~~~alk~a~~~~g 150 (453)
T 4ffc_A 81 SHPAVAAAIADQATHF-T-HTCFMVT--PY----EQYVQVAELLNALTPGDHDK--RTALFNSGAEAVENAIKVARLATG 150 (453)
T ss_dssp TCHHHHHHHHHHHHHC-S-CCTTTTS--CC----HHHHHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc-c-ccccCcC--CC----HHHHHHHHHHHHhCCCCCCc--EEEEeCcHHHHHHHHHHHHHHhcC
Confidence 4899999998776542 1 1221111 12 33334566788998754211 24566788999999997664 35
Q ss_pred CCEEeecCCCCCccccCCc-cc----cc-cccccCcceEEEEeccccC-CCCCCC--------HHHHHHHhhhcCCcEEE
Q 016668 192 HDRIMGLDLPHGGHLSHGF-MT----PK-RRVSGTSIYFESMPYRLDE-STGLVD--------YDMLEKTAILFRPKLII 256 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~-~~----~~-~~~~~~g~~~~~i~~~~~~-~~~~iD--------~d~le~~i~~~~pklIi 256 (385)
+|+|++.++.+.|+..... .+ .. .........+..++++... +....+ .+.|++.+...++.+|+
T Consensus 151 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi 230 (453)
T 4ffc_A 151 RPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAII 230 (453)
T ss_dssp CCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEE
T ss_pred CCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 6899988876543311000 00 00 0000011123444443211 011122 35566655433455666
Q ss_pred EcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCcEEEECCCccC-ccccEEEEE
Q 016668 257 AGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSL-RGPRGGMIF 325 (385)
Q Consensus 257 ~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaDiv~~S~hK~l-~GprgG~I~ 325 (385)
+++.+. +...+ +++|+++|+++|++||+|++| .|+...|.. ..++ ..|+++ ++|++ .|++.|+++
T Consensus 231 ~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~-~g~g~~g~~-~a~~~~~~~pdi~t--~sK~~~~G~~~G~~~ 306 (453)
T 4ffc_A 231 IEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQ-TGFARTGAW-FASEHEGIVPDIVT--MAKGIAGGMPLSAVT 306 (453)
T ss_dssp ECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSS-STHHHHTCCCSEEE--ECGGGGTTSSCEEEE
T ss_pred EcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCc-cCCCccccc-chhhhcCCCcchHh--hhhhhcCCcCeEEEE
Confidence 654321 22333 899999999999999999998 454333321 1111 346665 45998 467889999
Q ss_pred EeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchH
Q 016668 326 FKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 326 ~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+++ ++.+.+.........+++ ....++...+|+.+..+++
T Consensus 307 ~~~------~i~~~~~~~~~~~t~~~~-~~~~aaa~aal~~~~~~~~ 346 (453)
T 4ffc_A 307 GRA------ELMDAVYAGGLGGTYGGN-PVTCAAAVAALGVMRELDL 346 (453)
T ss_dssp EEH------HHHTTSCTTSSCCSSSSC-HHHHHHHHHHHHHHHHTTH
T ss_pred ECH------HHHhhhcccCcCCCCCcC-HHHHHHHHHHHHHhhhhhH
Confidence 887 576666544333333333 3444444456765544444
No 228
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.41 E-value=2.7e-12 Score=129.49 Aligned_cols=228 Identities=10% Similarity=0.004 Sum_probs=126.5
Q ss_pred CcHHHH-H-HHhh---HhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcC-CCCCCCcceeecCCcHHHHHHHHHH
Q 016668 114 TSRAVM-E-AVGS---CLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFN-LDENKWGVNVQPLSGSPANFEVYTA 187 (385)
Q Consensus 114 ~s~~V~-~-al~s---~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg-~~~~~~~~~V~~~sGs~A~~~a~~a 187 (385)
.+|.|. + ++.. .+.. ... +. .++ ..+...+ .+++++++++ .+.+ -.+++.||++|+..++..
T Consensus 71 ~~p~v~~~~A~~~~~~~~~~-~~~-~~-~~~--~~~~~~~----la~~la~~~~~~~~~---~v~~~~~gseA~~~aik~ 138 (449)
T 2cjg_A 71 NPPALVDDREFHAELMQAAL-NKP-SN-SDV--YSVAMAR----FVETFARVLGDPALP---HLFFVEGGALAVENALKA 138 (449)
T ss_dssp SCHHHHTCHHHHHHHHHHHT-CCC-CT-TTC--CCHHHHH----HHHHHHHHHCCTTCC---EEEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHh-cCC-CC-ccc--CCHHHHH----HHHHHHHhcCCCCCC---EEEEeCchHHHHHHHHHH
Confidence 478999 8 8887 5432 211 11 112 2232223 3456888886 3332 235567789999999875
Q ss_pred hc---c----------C-CCEEeecCCCCCccccCCccccccccccCcc-----------eEEEEeccccC--CC-----
Q 016668 188 IL---K----------P-HDRIMGLDLPHGGHLSHGFMTPKRRVSGTSI-----------YFESMPYRLDE--ST----- 235 (385)
Q Consensus 188 ll---~----------p-GD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~-----------~~~~i~~~~~~--~~----- 235 (385)
+. + | ||+|++.++.+.|+... .+...+. ......++.+. ..
T Consensus 139 a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 211 (449)
T 2cjg_A 139 AFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGY-------TLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMA 211 (449)
T ss_dssp HHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTT-------GGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHH
T ss_pred HHHHhcccccccccccCCCCEEEEECCCcCCcccc-------hhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccc
Confidence 43 2 2 99999999866443211 0111110 00122222321 00
Q ss_pred --CCCCHHHHHHHhhh--cCCcEEEEcCCCC--CCCCC----HHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC
Q 016668 236 --GLVDYDMLEKTAIL--FRPKLIIAGASAY--PRDFD----YPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK 303 (385)
Q Consensus 236 --~~iD~d~le~~i~~--~~pklIi~~~s~~--~~~~d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~ 303 (385)
...|+++|++.+++ .++++|++++.++ |...+ +++|+++|+++|++||+|++|. |+...|... ..++
T Consensus 212 ~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g~g~~g~~~~~~~~~ 290 (449)
T 2cjg_A 212 ALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQT-GCGLTGTAWAYQQLD 290 (449)
T ss_dssp HHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTTSSSSTHHHHT
T ss_pred hhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEecccc-CCCccCcceeecccC
Confidence 02466778888853 3567888876433 43445 9999999999999999999995 554333211 1112
Q ss_pred -CCcEEEECCCccCccccEEEEEEeCCCCchhHHHHHHh-----hccCCCccCCChHHHHHHHHHHHHHhhCchHH
Q 016668 304 -YCDVVTTTTHKSLRGPRGGMIFFKKDPVLGVELESAIN-----NAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 304 -gaDiv~~S~hK~l~GprgG~I~~~~~~~~~~~~~~~i~-----~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~ 373 (385)
..|+++ ++|+| +.|++++++ ++.+.+. ........ +.+....+|...+|+.+.++++.
T Consensus 291 ~~~di~t--~sK~l---~iG~~~~~~------~~~~~l~~~~~~~~~~~~t~-~~n~~~~~aa~aal~~~~~~~~~ 354 (449)
T 2cjg_A 291 VAPDIVA--FGKKT---QVCGVMAGR------RVDEVADNVFAVPSRLNSTW-GGNLTDMVRARRILEVIEAEGLF 354 (449)
T ss_dssp CCCSEEE--ECGGG---SSEEEEECG------GGGGSTTCTTTSTTSSCCSS-SSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCceEEE--ecCcc---cEEEEEECH------HHhhhhhhcccCCcccccCC-CCCHHHHHHHHHHHHHHHhccHH
Confidence 457765 45998 467777776 3444321 11111222 33445555556678765544443
No 229
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.28 E-value=1.5e-11 Score=121.81 Aligned_cols=183 Identities=14% Similarity=0.022 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCcceeecCCcH-HHHHHHHHHhccCCC----EEeecCCCCCccccCCccccccccccCcc
Q 016668 148 ELETLCQKRALAAFNLDENKWGVNVQPLSGS-PANFEVYTAILKPHD----RIMGLDLPHGGHLSHGFMTPKRRVSGTSI 222 (385)
Q Consensus 148 ~le~~~~~~la~lfg~~~~~~~~~V~~~sGs-~A~~~a~~all~pGD----~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~ 222 (385)
++++.+++++. ..|.+... ..+|.+++|+ +|+..++.++++||| +|++.+|.|.++.. .+...|.
T Consensus 72 ~lr~aia~~~~-~~g~~~~~-~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~--------~~~~~g~ 141 (391)
T 3bwn_A 72 ELEDAIKDLHG-VVGNAATE-DRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVE--------ETTYVRS 141 (391)
T ss_dssp HHHHHHHHHHH-HHCSBCCS-SSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHH--------HHHTTCB
T ss_pred HHHHHHHHHHH-hcCCCCCC-CCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHH--------HHHHcCC
Confidence 67776666655 44554211 0146666765 599999999999999 99999997765432 2345565
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccccCcccCCC
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPF 302 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~ 302 (385)
.+..++ +|.+. ++ ..++|+|+++.++||+-.-+++|++.++++++++|+|++|+.+ . ..++
T Consensus 142 ~~~~~~--~d~~~--l~---------~~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~-----~-~~~l 202 (391)
T 3bwn_A 142 GMYKWE--GDAWG--FD---------KKGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWP-----H-YTPI 202 (391)
T ss_dssp TTEEEE--EESTT--CC---------CCSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCST-----T-TSCC
T ss_pred eEEEec--CCHHH--cC---------CCCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCC-----C-CCcc
Confidence 444444 44321 22 1368999888888774322335544222334999999998631 1 1223
Q ss_pred C---CCcEEEECCCccC--ccccEEEEEE-eCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 303 K---YCDVVTTTTHKSL--RGPRGGMIFF-KKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 303 ~---gaDiv~~S~hK~l--~GprgG~I~~-~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
. +.+++++|+||++ +|+|.|++++ ++ ++.+.+........ .+++.....+.+.+++.
T Consensus 203 ~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~------~l~~~l~~~~~~~~-~~~~~~~q~a~~~~l~~ 265 (391)
T 3bwn_A 203 TRRQDHDIMLFTFSKITGHAGSRIGWALVKDK------EVAKKMVEYIIVNS-IGVSKESQVRTAKILNV 265 (391)
T ss_dssp CCCBCCSEEEEEHHHHHSCGGGCEEEEEECCH------HHHHHHHHHHHHHH-SSCCHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEEechhhcCCCccceEEEEecCH------HHHHHHHHHhcccc-cCCCHHHHHHHHHHHhC
Confidence 2 4568999999996 6889999997 54 56666654322111 23444444455556654
No 230
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.23 E-value=1e-11 Score=124.60 Aligned_cols=179 Identities=13% Similarity=0.042 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHHHHcC--CCCCCCcceeecCCc-HHHHHHHHHHh--------ccCCCEEeecCCCCCccccCCcccccc
Q 016668 147 DELETLCQKRALAAFN--LDENKWGVNVQPLSG-SPANFEVYTAI--------LKPHDRIMGLDLPHGGHLSHGFMTPKR 215 (385)
Q Consensus 147 ~~le~~~~~~la~lfg--~~~~~~~~~V~~~sG-s~A~~~a~~al--------l~pGD~Vl~~~~~~ggh~s~~~~~~~~ 215 (385)
.++++.+++++.+..+ ++.+ +|.+++| ++|+..++.++ ++|||+|++.+|.|.++..
T Consensus 103 ~~lr~aia~~~~~~~~~~~~~~----~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~-------- 170 (427)
T 2hox_A 103 FELEKTIKELHEVVGNAAAKDR----YIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFRE-------- 170 (427)
T ss_dssp HHHHHHHHHHHHHHTCBCCTTC----EEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHH--------
T ss_pred HHHHHHHHHHHHHhCCcCCCCC----EEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHH--------
Confidence 3788777777766544 3332 4555555 56999999999 9999999999987754421
Q ss_pred ccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC--CCCCHHHHHHHHHHcCcEEEEecccccccc
Q 016668 216 RVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP--RDFDYPRMRQIADAVGALLMMDMAHISGLV 293 (385)
Q Consensus 216 ~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~--~~~dl~~I~~ia~~~ga~livD~ah~~Gli 293 (385)
.+...|..+. .+ .+|+++|++.++. ++|+|+++.++|| ...+ + +++ ++..++|++++-.
T Consensus 171 ~~~~~g~~~~--~~-------~~d~~~l~~~~~~-~~k~v~l~~p~NPtG~~~~-~----~l~--~~~~i~d~~~~~~-- 231 (427)
T 2hox_A 171 QTKYFDKKGY--VW-------AGNAANYVNVSNP-EQYIEMVTSPNNPEGLLRH-A----VIK--GCKSIYDMVYYWP-- 231 (427)
T ss_dssp HHHHSCBTTE--EE-------EEEGGGGTTCSCG-GGEEEEEESSCTTTCCCCC-C----SST--TCEEEEECTTCST--
T ss_pred HHHHcCCeee--ee-------cCCHHHHHHhhcC-CceEEEEcCCCCCcccccH-H----HHc--CCCEEEeecccCC--
Confidence 2334454322 22 2566777777754 6899888777776 3455 3 333 5678899876421
Q ss_pred ccCcccC--CCC-CCcEEEECCCccC--ccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHH
Q 016668 294 AASVVAD--PFK-YCDVVTTTTHKSL--RGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKH 366 (385)
Q Consensus 294 ~~g~~~~--p~~-gaDiv~~S~hK~l--~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e 366 (385)
.++ .+. +.+++++|+||++ +|.|.|+++++++ ++.+++.........+.+...+.+ .+.+|+.
T Consensus 232 ----~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-----~l~~~l~~~~~~~~~~~~~~~q~a-~~~~L~~ 299 (427)
T 2hox_A 232 ----HYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDE-----SVYNNLLNYMTKNTEGTPRETQLR-SLKVLKE 299 (427)
T ss_dssp ----TTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCH-----HHHHHHHHHHHHHTSSCCHHHHHH-HHHHHHH
T ss_pred ----CCCccccCCCceEEEEeChhcCCCCCceEEEEEECCH-----HHHHHHHHHHHhcCCCCCHHHHHH-HHHHhhc
Confidence 111 122 4679999999987 6788999999643 677776654333223334443443 3445554
No 231
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=98.85 E-value=1.2e-12 Score=133.43 Aligned_cols=220 Identities=17% Similarity=0.099 Sum_probs=127.0
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHc-CCCCCCCcceeecCCcHHHHHHHHHHh--cc
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAF-NLDENKWGVNVQPLSGSPANFEVYTAI--LK 190 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lf-g~~~~~~~~~V~~~sGs~A~~~a~~al--l~ 190 (385)
.+|.|.+++...+......+|+ + +.+...++++++++ +.+. .++++||++|+..++..+ ..
T Consensus 117 ~~p~V~~Av~~q~~~~~~~~~~-------~----~~~~~Lae~L~~~~p~~~~-----v~~~nSGseA~~~Aik~ar~~t 180 (465)
T 2yky_A 117 SHPVIRAAVERALAVGLNLSTQ-------T----ENEALFAEAVCDRFPSIDL-----VRFTNSGTEANLMALATATAIT 180 (465)
Confidence 3799999988766542111111 1 22333445677888 4433 356778999999998765 34
Q ss_pred CCCEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhh--cCCcEEEEcCC--CCCCCC
Q 016668 191 PHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAIL--FRPKLIIAGAS--AYPRDF 266 (385)
Q Consensus 191 pGD~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~--~~pklIi~~~s--~~~~~~ 266 (385)
.+|+|++.+..+.|+.. +... .....|.....+.++ ..|+++|++.++. .++++|++++. +.+...
T Consensus 181 gr~~ii~~~~~yHG~~~-~~~s---g~~~~g~~~~~~~~~------~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~ 250 (465)
T 2yky_A 181 GRKTVLAFDGGYHGGLL-NFAS---GHAPTNAPYHVVLGV------YNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVP 250 (465)
Confidence 56999988865533211 1000 000112100122222 2478899988863 36788888653 234333
Q ss_pred C----HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC----CCcEEEECCCccCc-cccEEEEEEeCCCCchhHHH
Q 016668 267 D----YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK----YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELE 337 (385)
Q Consensus 267 d----l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~----gaDiv~~S~hK~l~-GprgG~I~~~~~~~~~~~~~ 337 (385)
+ +++|+++|+++|++||+|++|. + .. +. ...++ ..|++ |++|++. |.+.|++++++ ++.
T Consensus 251 ~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~-g~-~~a~~~~gv~pDi~--t~sK~lg~G~piG~v~~~~------~i~ 318 (465)
T 2yky_A 251 AERAFLDLLRAEASRCGALLIFDEVMT-S-RL-SG-GGAQEMLGISADLT--TLGKYIGGGMSFGAFGGRR------DLM 318 (465)
Confidence 3 8999999999999999999997 4 22 21 11122 24655 6779984 46779999888 465
Q ss_pred HHHhh---c-cCC-CccCCChHHHHHHHHHHHHHhhCchH
Q 016668 338 SAINN---A-VFP-GLQGGPHNHTIGGLAVCLKHAQSPEF 372 (385)
Q Consensus 338 ~~i~~---~-~fp-~~qg~p~~~~iaala~Al~e~~~~~~ 372 (385)
+.+.. . .+. +..+ .++...++..++|+.+.++++
T Consensus 319 ~~l~~~~~g~~~~~~T~~-~npla~aAa~aaL~~l~~~~~ 357 (465)
T 2yky_A 319 ERFDPARDGAFAHAGTFN-NNILTMSAGHAALTQIYTRQA 357 (465)
Confidence 65544 1 122 2222 233344444456766655444
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.21 E-value=5.4e-10 Score=113.39 Aligned_cols=225 Identities=20% Similarity=0.140 Sum_probs=126.7
Q ss_pred cHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc--cCC
Q 016668 115 SRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--KPH 192 (385)
Q Consensus 115 s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--~pG 192 (385)
+|.|.+|+...+..-...+. -++ ++....+++++++.--. ...+++|||+||..++.... ...
T Consensus 105 hp~v~~Av~~q~~~~~~~~~-------~~~----~~~~lae~l~~~~p~~~----~v~f~~SGsEA~e~AiklAr~~tgr 169 (454)
T 4ao9_A 105 APEIRDAVIEAMQGGINLTG-------HNL----LEGRLARLICERFPQIE----QLRFTNSGTEANLMALTAALHFTGR 169 (454)
T ss_dssp CHHHHHHHHHHHHTCSCCCS-------EES----SHHHHHHHHHHHSTTCS----EEEEESSHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhcCCCccC-------CcH----HHHHHHHHHHHhCCCCC----EEEEeCchHHHHHHHHHHHHhcccC
Confidence 79999998877754222111 112 22233456777775322 13556899999999987653 345
Q ss_pred CEEeecCCCCCccccCCccccccccccCcceEEEEeccccCCCCCCCHHHHHHHhhhcCC--cEEEEcCC--CCCCCCC-
Q 016668 193 DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRP--KLIIAGAS--AYPRDFD- 267 (385)
Q Consensus 193 D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~iD~d~le~~i~~~~p--klIi~~~s--~~~~~~d- 267 (385)
++|+..+-.|.|+.. +. .. ...-....+....++ .-|.+.+++.++++.+ .+||+.+. +.+...+
T Consensus 170 ~~ii~~~~~yHG~t~-~~-~~--~~~~~~~~~~~~~~p------~nd~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~ 239 (454)
T 4ao9_A 170 RKIVVFSGGYHGGVL-GF-GA--RPSPTTVPFDFLVLP------YNDAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQ 239 (454)
T ss_dssp CEEEEETTCBCSTTC-BB-SS--SBCTTSCCSEEEEEC------TTCHHHHHHHHHHTGGGEEEEEECSEESTTTCEECC
T ss_pred CeEEEEeCCcCCccc-cc-cc--cccCccCCCCcccCC------CchHHHHHHHHhhcCCceEEEEeccccCCCCccCCc
Confidence 678877644322211 10 00 000011111222222 2488999999876444 45676542 2333333
Q ss_pred ---HHHHHHHHHHcCcEEEEeccccccccccCcccCCCC-CCcEEEECCCccCc-cccEEEEEEeCCCCchhHHHHHHhh
Q 016668 268 ---YPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK-YCDVVTTTTHKSLR-GPRGGMIFFKKDPVLGVELESAINN 342 (385)
Q Consensus 268 ---l~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~-gaDiv~~S~hK~l~-GprgG~I~~~~~~~~~~~~~~~i~~ 342 (385)
+++|+++|+++|++||+|+.|+ |-...+....-+. ..|+++.+ |.+. |...|.+.+++ ++.+.++.
T Consensus 240 ~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~g--K~lggG~Piga~~~~~------ei~~~~~~ 310 (454)
T 4ao9_A 240 PDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLG--KYIGGGMSFGAFGGRA------DVMALFDP 310 (454)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECH------HHHGGGCT
T ss_pred hhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEec--cccCCCCcceeeeeHH------HHHHHHhh
Confidence 8999999999999999999996 6432221111112 35887655 8874 44567777877 67776653
Q ss_pred ccCCCccC---CChHHHHHHHHHHHHHhhCchHH
Q 016668 343 AVFPGLQG---GPHNHTIGGLAVCLKHAQSPEFK 373 (385)
Q Consensus 343 ~~fp~~qg---~p~~~~iaala~Al~e~~~~~~~ 373 (385)
..-+..++ +-++..++|-.++|+.+.++++.
T Consensus 311 ~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~ 344 (454)
T 4ao9_A 311 RTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAA 344 (454)
T ss_dssp TTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHH
T ss_pred ccCCccccCCCCCCHHHHHHHHHHHHHHhccChh
Confidence 32222222 23344555555678888777653
No 233
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.15 E-value=2.4e-10 Score=116.23 Aligned_cols=228 Identities=14% Similarity=0.118 Sum_probs=124.6
Q ss_pred CcHHHHHHHhhHhhcc-CCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc---
Q 016668 114 TSRAVMEAVGSCLTNK-YSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~-y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--- 189 (385)
.+|.|.+++...+... +..+ + . + |+....++++.++++++++++...+ -.+++.||++||..++..+.
T Consensus 80 ~~p~v~~A~~~~~~~~~~~~~-~--~-~-~~~~~~~l~~~la~~l~~~~~~~~~---~v~f~~sGseA~~~Aik~a~~~~ 151 (472)
T 1ohv_A 80 SHPALVKLVQQPQNVSTFINR-P--A-L-GILPPENFVEKLRESLLSVAPKGMS---QLITMACGSCSNENAFKTIFMWY 151 (472)
T ss_dssp TCHHHHHHHHCGGGHHHHHCC-C--C-T-TTSCBTTHHHHHHHTGGGGCCTTCC---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcccccc-c--c-c-ccccHHHHHHHHHHHHHHhCCCCcC---EEEEeCCchhHHHHHHHHHHHHh
Confidence 4899999998764321 1111 0 1 1 1111125665555566666644332 23567889999999998763
Q ss_pred ----c------------------CC---CEEeecCCCCCccccCCccccccccccCcce-----------EEEEecccc-
Q 016668 190 ----K------------------PH---DRIMGLDLPHGGHLSHGFMTPKRRVSGTSIY-----------FESMPYRLD- 232 (385)
Q Consensus 190 ----~------------------pG---D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g~~-----------~~~i~~~~~- 232 (385)
+ || |+|++.++.+.|+.. . .+...|.. +..++++..
T Consensus 152 ~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~-----~--~~~~~g~~~~~~~~~~~~~~~~~~~p~~~ 224 (472)
T 1ohv_A 152 RSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTM-----G--CLATTHSKAIHKIDIPSFDWPIAPFPRLK 224 (472)
T ss_dssp HHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSH-----H--HHHHCCSCHHHHTTSCCCCCCEECCCCCC
T ss_pred hhhccCcccccccccccccccccccCCCCeEEEECCCcccccH-----H--HHhcCCCccccccCCCCCCCcccCCCccc
Confidence 1 56 899998865533211 0 11111110 011122110
Q ss_pred -C--CC-------CCCCHHHHHHHhhhc-----CCcEEEEcCC--CCCCCCC----HHHHHHHHHHcCcEEEEecccccc
Q 016668 233 -E--ST-------GLVDYDMLEKTAILF-----RPKLIIAGAS--AYPRDFD----YPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 233 -~--~~-------~~iD~d~le~~i~~~-----~pklIi~~~s--~~~~~~d----l~~I~~ia~~~ga~livD~ah~~G 291 (385)
+ .. ...|+++|++.+++. ++++|++++. ..|...+ +++|+++|+++|++||+|++|. |
T Consensus 225 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~-g 303 (472)
T 1ohv_A 225 YPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQT-G 303 (472)
T ss_dssp SSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTT-T
T ss_pred CccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCccc-C
Confidence 0 00 023688999988652 6788888653 2455556 9999999999999999999995 5
Q ss_pred ccccCcccCCCC--C----CcEEEECCCcc-CccccEEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHH
Q 016668 292 LVAASVVADPFK--Y----CDVVTTTTHKS-LRGPRGGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCL 364 (385)
Q Consensus 292 li~~g~~~~p~~--g----aDiv~~S~hK~-l~GprgG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al 364 (385)
+...|... .++ + .|++++ +|+ +. ||+++ ++ ++. .+......+..+ .+...+++..++|
T Consensus 304 ~g~~g~~~-~~~~~gv~~~~Di~t~--sK~~l~---GG~~~-~~------~~~-~~~~~~~~~T~~-~~~~~~aaa~aal 368 (472)
T 1ohv_A 304 GGSTGKFW-AHEHWGLDDPADVMTF--SKKMMT---GGFFH-KE------EFR-PNAPYRIFNTWL-GDPSKNLLLAEVI 368 (472)
T ss_dssp TTTTSSSS-GGGGGCCSSCCSEEEE--CGGGSS---EEEEE-CG------GGS-CSSSSSSCCSSS-SCHHHHHHHHHHH
T ss_pred CCCCCCch-hccccCCCCCCCEEEE--cccccc---CCccC-ch------hhc-ccccccccCccC-ccHHHHHHHHHHH
Confidence 43333211 111 2 677654 498 54 47766 43 331 111111122222 3445555556677
Q ss_pred HHhhCchH
Q 016668 365 KHAQSPEF 372 (385)
Q Consensus 365 ~e~~~~~~ 372 (385)
+.+.++++
T Consensus 369 ~~~~~~~~ 376 (472)
T 1ohv_A 369 NIIKREDL 376 (472)
T ss_dssp HHHHHTTH
T ss_pred HHHHhCCH
Confidence 76654444
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.83 E-value=5.6e-07 Score=91.23 Aligned_cols=238 Identities=16% Similarity=0.105 Sum_probs=123.9
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHh--ccC
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAI--LKP 191 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~al--l~p 191 (385)
-+|.|.+|+...+.. ..+... +..-++ .+....+++.+++..+..+ ..++++|||+|+..++... ...
T Consensus 81 ~~p~v~~Ai~~q~~~-~~~~~~---~~~~~~----~~~~lae~L~~~~p~~~~~--~v~f~~sGsEA~e~AlklAr~~t~ 150 (456)
T 4atq_A 81 SDPAVVAAVQEAAAH-FTHTCF---MVTPYE----GYVAVTEQLNRLTPGDHAK--RTVLFNSGAEAVENAVKVARLATG 150 (456)
T ss_dssp TCHHHHHHHHHHHHH-CSCCTT---TTSCCH----HHHHHHHHHHHHSSCSSCE--EEEEESSHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhh-ccCccc---CccCcH----HHHHHHHHHHHhCCCCCCc--EEEEeCChHHHHHHHHHHHhhhhc
Confidence 378888888776543 221111 111122 1112345677887644211 2345689999999998654 345
Q ss_pred CCEEeecCCCCCccccCCccccc------c---cccc--CcceEEEEeccc--cCCC-CCCCHHHHHHHhh-------hc
Q 016668 192 HDRIMGLDLPHGGHLSHGFMTPK------R---RVSG--TSIYFESMPYRL--DEST-GLVDYDMLEKTAI-------LF 250 (385)
Q Consensus 192 GD~Vl~~~~~~ggh~s~~~~~~~------~---~~~~--~g~~~~~i~~~~--~~~~-~~iD~d~le~~i~-------~~ 250 (385)
.++|+...-.| ||..... . .... ....+..+|++. .... ...+.+.+++.++ ..
T Consensus 151 r~~ii~~~~~y-----HG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 225 (456)
T 4atq_A 151 RDAVVAFDHAY-----HGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGD 225 (456)
T ss_dssp CCEEEEETTCC-----CCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGG
T ss_pred CCeEEEEeccc-----CCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCC
Confidence 67888776433 2221000 0 0000 011123334322 1111 1233444433332 22
Q ss_pred CCcEEEEcCC--CCC----CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEECCCccCc-ccc
Q 016668 251 RPKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTTTTHKSLR-GPR 320 (385)
Q Consensus 251 ~pklIi~~~s--~~~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~S~hK~l~-Gpr 320 (385)
+...||+.+. ..+ ...-+++|+++|++||++||+|+.+ .|+.-.|... ..+. ..|+++++ |.+. |..
T Consensus 226 ~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~-tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P 302 (456)
T 4atq_A 226 QVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQ-SGFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLP 302 (456)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTT-TTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSS
T ss_pred ceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccc-cccCCccccccccccCCCCchhhhh--hcccCcCC
Confidence 3456777642 122 2234899999999999999999998 4542223211 1122 46898876 8874 345
Q ss_pred EEEEEEeCCCCchhHHHHHHhhccCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 321 GGMIFFKKDPVLGVELESAINNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 321 gG~I~~~~~~~~~~~~~~~i~~~~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
.|.+++++ ++.+.+.......+.++ |+...++..++|+.+.++++.+.+
T Consensus 303 ~~av~~~~------~i~~~~~~~~~~~Tf~g-npla~aaala~L~~i~~~~l~~~~ 351 (456)
T 4atq_A 303 LSAITGRA------DLLDAVHPGGLGGTYGG-NPVACAAALAAIDTMEQHDLNGRA 351 (456)
T ss_dssp CEEEEEEH------HHHTTSCTTSSCCSSSS-CHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred ceeeEecH------HHHhcccccCCCCCCCC-ChHHHHhhHHHHHHHhhccHHHHH
Confidence 56677777 56655544333334433 444555555578777766664433
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.37 E-value=1.2e-05 Score=81.71 Aligned_cols=235 Identities=15% Similarity=0.108 Sum_probs=121.3
Q ss_pred CcHHHHHHHhhHhhccCCCCCCCCCCCCC-cHHHHHHHHHHHHHHHHHcCCCCCCCcceeecCCcHHHHHHHHHHhc---
Q 016668 114 TSRAVMEAVGSCLTNKYSEGLPGKRYYGG-NEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAIL--- 189 (385)
Q Consensus 114 ~s~~V~~al~s~l~~~y~~g~p~~r~~~G-~~~~~~le~~~~~~la~lfg~~~~~~~~~V~~~sGs~A~~~a~~all--- 189 (385)
-.|.|.+++...+..-.. +. .+++. ++ .+....+++.++...+.+ -..+..|||+|+..++....
T Consensus 84 ~~p~v~~Ai~~q~~~l~~--~~--~~~~~~~~----~~~~lAe~L~~~~p~~~~---~v~f~~sGsEA~e~AiKlAr~~~ 152 (473)
T 4e3q_A 84 DHKGLIDAAKAQYERFPG--YH--AFFGRMSD----QTVMLSEKLVEVSPFDSG---RVFYTNSGSEANDTMVKMLWFLH 152 (473)
T ss_dssp CCHHHHHHHHHHHHHCCC--CC--CCTTEEEH----HHHHHHHHHHHHSSCSSC---EEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhccc--cc--ccccccCH----HHHHHHHHHHhhCCCCcc---EEEEeCchHHHHHHHHHHHHHHH
Confidence 379999998877654211 10 11111 22 122245678888765432 13456789999999987542
Q ss_pred ----cCC-CEEeecCCCCCccccCCccccccccccCc-----------ceEEEEecc----ccCCCCCC-------CHHH
Q 016668 190 ----KPH-DRIMGLDLPHGGHLSHGFMTPKRRVSGTS-----------IYFESMPYR----LDESTGLV-------DYDM 242 (385)
Q Consensus 190 ----~pG-D~Vl~~~~~~ggh~s~~~~~~~~~~~~~g-----------~~~~~i~~~----~~~~~~~i-------D~d~ 242 (385)
+++ .+|+...-.| ||.... .++..+ -.+..++++ .. +.+.. ..++
T Consensus 153 ~~~g~~~r~~ii~~~~~y-----HG~t~~--a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~ 224 (473)
T 4e3q_A 153 AAEGKPQKRKILTRWNAY-----HGVTAV--SASMTGKPYNSVFGLPLPGFVHLTCPHYWRYG-EEGETEEQFVARLARE 224 (473)
T ss_dssp HHTTCTTCCEEEEETTCC-----CCSSHH--HHHHSCCGGGGGGTCSCTTEEEECCCCHHHHS-CTTCCHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEeeceE-----CCCccc--cccccccccccccCCCCCcccccCCCcccccc-cccchhhHHHHHHHHH
Confidence 233 4677665332 332100 001111 011222221 11 11111 1244
Q ss_pred HHHHhhhcC---CcEEEEcCC--CCC----CCCCHHHHHHHHHHcCcEEEEeccccccccccCccc--CCCC-CCcEEEE
Q 016668 243 LEKTAILFR---PKLIIAGAS--AYP----RDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVA--DPFK-YCDVVTT 310 (385)
Q Consensus 243 le~~i~~~~---pklIi~~~s--~~~----~~~dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~--~p~~-gaDiv~~ 310 (385)
+++.+.... ...||+.+. ..+ ...-+++|+++|+++|++||.|+.+ .|+.-.|... .-++ ..|+++.
T Consensus 225 l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~-tGfGRtG~~fa~e~~gv~PDi~t~ 303 (473)
T 4e3q_A 225 LEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVI-CGFGRTGNTWGCVTYDFTPDAIIS 303 (473)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTT-TSSSTTSSSCHHHHTTCCCSEEEE
T ss_pred HHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCcc-ccCCcccchhHHHhcCCCCChHHh
Confidence 555554322 345666542 122 2233899999999999999999998 4542222211 1122 4688876
Q ss_pred CCCccCc-c-ccEEEEEEeCCCCchhHHHHHHhhc------cCCCccCCChHHHHHHHHHHHHHhhCchHHHHH
Q 016668 311 TTHKSLR-G-PRGGMIFFKKDPVLGVELESAINNA------VFPGLQGGPHNHTIGGLAVCLKHAQSPEFKVYQ 376 (385)
Q Consensus 311 S~hK~l~-G-prgG~I~~~~~~~~~~~~~~~i~~~------~fp~~qg~p~~~~iaala~Al~e~~~~~~~~y~ 376 (385)
+ |.+. | ...|.+++++ ++.+.+... .+.+..-+-|+...|+..++|+.+.++++.+..
T Consensus 304 ~--K~l~gG~~Pl~av~~~~------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~~~~ 369 (473)
T 4e3q_A 304 S--KNLTAGFFPMGAVILGP------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENV 369 (473)
T ss_dssp C--GGGGTTSSCCEEEEECH------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHHHHH
T ss_pred c--ccccCCCCCcccccccH------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHHHHH
Confidence 5 9884 4 4667777777 566655432 112222223445555555578777776664433
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.29 E-value=1.8e-05 Score=85.75 Aligned_cols=121 Identities=12% Similarity=0.065 Sum_probs=71.4
Q ss_pred HHHHHHhhh-------cCCcEEEEcCC--CC-CCCC----CHHHHHHHHHHcCcEEEEeccccccccccCcccCCCC---
Q 016668 241 DMLEKTAIL-------FRPKLIIAGAS--AY-PRDF----DYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFK--- 303 (385)
Q Consensus 241 d~le~~i~~-------~~pklIi~~~s--~~-~~~~----dl~~I~~ia~~~ga~livD~ah~~Gli~~g~~~~p~~--- 303 (385)
++|++.+++ .++.+||+.+. .. +... -+++|+++|++||++||+|++| .|+.-.|... ..+
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~-tGfGRtG~~f-a~e~~g 654 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVF-TGFWRLGVET-TTELLG 654 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTT-TTTTTTSBSS-THHHHS
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCc-cccccCCCch-hhHhcC
Confidence 567777752 23457777653 22 2222 2899999999999999999997 4543333221 111
Q ss_pred -CCcEEEECCCccCcc--ccEEEEEEeCCCCchhHHHHHHhhc-----cCCCccCCChHHHHHHHHHHHHHhhCch
Q 016668 304 -YCDVVTTTTHKSLRG--PRGGMIFFKKDPVLGVELESAINNA-----VFPGLQGGPHNHTIGGLAVCLKHAQSPE 371 (385)
Q Consensus 304 -gaDiv~~S~hK~l~G--prgG~I~~~~~~~~~~~~~~~i~~~-----~fp~~qg~p~~~~iaala~Al~e~~~~~ 371 (385)
..|++| +.|.|.| .+.|++++++ ++.+.+... .+.+..-+.++...|+..++|+.+.+++
T Consensus 655 v~PDiit--lsK~L~gG~~Plgav~~~~------~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~ 722 (831)
T 4a0g_A 655 CKPDIAC--FAKLLTGGMVPLAVTLATD------AVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPE 722 (831)
T ss_dssp SCCSEEE--ECGGGGTTSSCCEEEEECH------HHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCcEEE--EecccccCccCcEEEEECH------HHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhH
Confidence 357775 5699965 3668888887 576666432 1122222334455555555777665544
No 237
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=41.09 E-value=22 Score=29.90 Aligned_cols=51 Identities=14% Similarity=0.006 Sum_probs=36.0
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
++++.++. ...++++.+.+.+.+|++|.++.........++++.+..++.|
T Consensus 47 ~eVi~lG~-----~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 47 FEVVYTGL-----RQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELG 97 (161)
T ss_dssp CEEECCCS-----BCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcC
Confidence 46665433 3678999888888899999887665554445677777777754
No 238
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=37.84 E-value=53 Score=30.11 Aligned_cols=59 Identities=10% Similarity=0.162 Sum_probs=40.6
Q ss_pred eEEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCC---CCCCHHHHHHHHHHcC----cEEEEec
Q 016668 223 YFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYP---RDFDYPRMRQIADAVG----ALLMMDM 286 (385)
Q Consensus 223 ~~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~---~~~dl~~I~~ia~~~g----a~livD~ 286 (385)
.++++.++. .+.++++-+.+.+.+|++|.++....+ ....++++.+..++.| +.+++=+
T Consensus 157 G~eVi~LG~-----~vp~e~iv~aa~e~~~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG 222 (262)
T 1xrs_B 157 MIDAYNLGS-----QVANEDFIKKAVELEADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGG 222 (262)
T ss_dssp TEEEEECCS-----SBCHHHHHHHHHHTTCSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEEC
T ss_pred CcEEEECCC-----CCCHHHHHHHHHHcCCCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 367776543 477899988888889999988766555 3334666777777766 5555443
No 239
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=36.90 E-value=50 Score=32.10 Aligned_cols=90 Identities=14% Similarity=0.114 Sum_probs=60.4
Q ss_pred CCCCCHHHHHHHhhh---c-CCcEEEE-cCCCCCC---CCCHHHHHHHHHHc-CcEEEEecccccc-ccccCcccCCCC-
Q 016668 235 TGLVDYDMLEKTAIL---F-RPKLIIA-GASAYPR---DFDYPRMRQIADAV-GALLMMDMAHISG-LVAASVVADPFK- 303 (385)
Q Consensus 235 ~~~iD~d~le~~i~~---~-~pklIi~-~~s~~~~---~~dl~~I~~ia~~~-ga~livD~ah~~G-li~~g~~~~p~~- 303 (385)
+|.-++++++.+++- . ..+++++ +.+.||. ..|+..|..+.+.. ++.+ .|..|..| .... .-.+.
T Consensus 165 tGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpV-G~SdHt~G~~~~~---~AAvAl 240 (385)
T 1vli_A 165 TAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVI-GFSDHSEHPTEAP---CAAVRL 240 (385)
T ss_dssp CTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEE-EEEECCSSSSHHH---HHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCE-EeCCCCCCchHHH---HHHHHc
Confidence 566688888877642 2 2467765 4566764 46899999999998 8877 68889877 3211 01112
Q ss_pred CCcEE--EECCCccCccccEEEEEEeC
Q 016668 304 YCDVV--TTTTHKSLRGPRGGMIFFKK 328 (385)
Q Consensus 304 gaDiv--~~S~hK~l~GprgG~I~~~~ 328 (385)
|||++ -++..|++.||.+..=+..+
T Consensus 241 GA~iIEkHftldra~~G~D~~~SL~P~ 267 (385)
T 1vli_A 241 GAKLIEKHFTIDKNLPGADHSFALNPD 267 (385)
T ss_dssp TCSEEEEEBCSCTTSSCSSCTTSBCHH
T ss_pred CCCEEEeCCCccccCCCCchhhhCCHH
Confidence 89963 68999999888764433333
No 240
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=36.34 E-value=33 Score=32.89 Aligned_cols=90 Identities=16% Similarity=0.161 Sum_probs=60.7
Q ss_pred CCCCCHHHHHHHhhh---cCCcEEEE-cCCCCCC---CCCHHHHHHHHHHc-CcEEEEeccccccccccCcccCCCC-CC
Q 016668 235 TGLVDYDMLEKTAIL---FRPKLIIA-GASAYPR---DFDYPRMRQIADAV-GALLMMDMAHISGLVAASVVADPFK-YC 305 (385)
Q Consensus 235 ~~~iD~d~le~~i~~---~~pklIi~-~~s~~~~---~~dl~~I~~ia~~~-ga~livD~ah~~Gli~~g~~~~p~~-ga 305 (385)
+|.-++++++.+++- ...+++++ +.+.||. ..|+..|..+.+.. ++.+ .|..|..|.... .-.+. ||
T Consensus 155 tGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpV-g~sdHt~G~~~~---~AAvAlGA 230 (349)
T 2wqp_A 155 TGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAII-GLSDHTLDNYAC---LGAVALGG 230 (349)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEE-EEECCSSSSHHH---HHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCE-EeCCCCCcHHHH---HHHHHhCC
Confidence 566688888777642 22367766 4566764 46899999999998 8877 588998873211 01122 89
Q ss_pred cEE--EECCCccCccccEEEEEEeC
Q 016668 306 DVV--TTTTHKSLRGPRGGMIFFKK 328 (385)
Q Consensus 306 Div--~~S~hK~l~GprgG~I~~~~ 328 (385)
|++ -++..|++.||.+..=+..+
T Consensus 231 ~iIEkH~tld~a~~G~D~~~SL~p~ 255 (349)
T 2wqp_A 231 SILERHFTDRMDRPGPDIVCSMNPD 255 (349)
T ss_dssp CEEEEEBCSCTTCCSTTGGGCBCHH
T ss_pred CEEEeCCCccccCCCCChhhhCCHH
Confidence 963 68999999888775444444
No 241
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=33.89 E-value=47 Score=28.79 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=39.4
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC----cEEEEec
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG----ALLMMDM 286 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g----a~livD~ 286 (385)
++++.++. ....+++.+.+++.+|++|.++....+....++++.+..++.| +.+++=+
T Consensus 117 ~~v~~LG~-----~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG 178 (210)
T 1y80_A 117 FTVYNLGV-----DIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGG 178 (210)
T ss_dssp CEEEECCS-----SBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEES
T ss_pred CEEEECCC-----CCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEC
Confidence 45555443 3678999888877799999887655444445777777777765 5555543
No 242
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=32.47 E-value=1e+02 Score=24.67 Aligned_cols=50 Identities=6% Similarity=-0.134 Sum_probs=37.2
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
.++.++++..++. +|.+|++|.-.......-+++.+..+++|+-+-+-.+
T Consensus 48 ~l~~~~l~~ll~~-~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T 97 (122)
T 2ab1_A 48 GVQPADVKEVVEK-GVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQT 97 (122)
T ss_dssp CCCHHHHHHHHTT-CCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECH
T ss_pred HCCHHHHHHHhhC-CCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCH
Confidence 4888999998865 7999999865555432347788888999987766543
No 243
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=30.22 E-value=18 Score=35.24 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=24.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|+..|+++|++-||++|+.||+|..
T Consensus 71 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 98 (496)
T 4gqr_A 71 TRSGNEDEFRNMVTRCNNVGVRIYVDAV 98 (496)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3467777899999999999999999986
No 244
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=29.41 E-value=1.2e+02 Score=26.78 Aligned_cols=48 Identities=21% Similarity=0.137 Sum_probs=36.6
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+++++++++.. ..+.|+++...-..+..++++.+.+++.|..+++|..
T Consensus 90 ~~~~i~~~~~a-Gad~I~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v~ 137 (229)
T 3q58_A 90 YLQDVDALAQA-GADIIAFDASFRSRPVDIDSLLTRIRLHGLLAMADCS 137 (229)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEECS
T ss_pred cHHHHHHHHHc-CCCEEEECccccCChHHHHHHHHHHHHCCCEEEEecC
Confidence 45677776654 7888888766544446789999999999999999853
No 245
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=29.04 E-value=1.3e+02 Score=26.76 Aligned_cols=47 Identities=17% Similarity=0.078 Sum_probs=36.2
Q ss_pred CHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEec
Q 016668 239 DYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDM 286 (385)
Q Consensus 239 D~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ 286 (385)
+++++++++.. ..+.|+++......+..++++.+.+++.|..+++|.
T Consensus 90 ~~~~i~~~~~~-Gad~V~l~~~~~~~p~~l~~~i~~~~~~g~~v~~~v 136 (232)
T 3igs_A 90 FLDDVDALAQA-GAAIIAVDGTARQRPVAVEALLARIHHHHLLTMADC 136 (232)
T ss_dssp SHHHHHHHHHH-TCSEEEEECCSSCCSSCHHHHHHHHHHTTCEEEEEC
T ss_pred cHHHHHHHHHc-CCCEEEECccccCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 45677776654 788888876654344678999999999999999985
No 246
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=28.39 E-value=56 Score=31.68 Aligned_cols=57 Identities=19% Similarity=0.318 Sum_probs=41.5
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEEc--CCCCCC----CCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 235 TGL-VDYDMLEKTAIL----FRPKLIIAG--ASAYPR----DFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~~--~s~~~~----~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
+|. -+++++...++. ..++++++. .+.||. ..|+..|..+.+..+..+++|-+|+.|
T Consensus 256 ~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~~G 323 (385)
T 3nvt_A 256 RGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHLPVMVDVTHSTG 323 (385)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHHHC
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCCCEEEcCCCCCC
Confidence 565 788888776642 245777763 455553 468888888888889999999999765
No 247
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=28.30 E-value=53 Score=31.50 Aligned_cols=57 Identities=16% Similarity=0.183 Sum_probs=40.5
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEE-----cCCCC-CCCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 235 TGL-VDYDMLEKTAIL----FRPKLIIA-----GASAY-PRDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~-----~~s~~-~~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
+|. .+++++...++. ..++++++ +++++ ....|+..|..+.+..+..++.|.+|+.|
T Consensus 220 ~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~lpVi~dssHs~G 287 (350)
T 1vr6_A 220 RGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGG 287 (350)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECHHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhCCCEEEeCCCCCc
Confidence 565 488888766642 24677776 22333 34568888888888789999999999876
No 248
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=25.66 E-value=36 Score=27.68 Aligned_cols=51 Identities=22% Similarity=0.301 Sum_probs=33.8
Q ss_pred EEEEeccccCCCCCCCHHHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcC
Q 016668 224 FESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVG 279 (385)
Q Consensus 224 ~~~i~~~~~~~~~~iD~d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~g 279 (385)
++++.++. ...++++.+.+.+.+|++|.++.........++++.+..++.|
T Consensus 32 ~~Vi~lG~-----~~p~e~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g 82 (137)
T 1ccw_A 32 FNVVNIGV-----LSPQELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAG 82 (137)
T ss_dssp CEEEEEEE-----EECHHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTT
T ss_pred CEEEECCC-----CCCHHHHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcC
Confidence 46665443 3678888888877789999887665443334566666666654
No 249
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=25.45 E-value=29 Score=33.81 Aligned_cols=28 Identities=14% Similarity=0.376 Sum_probs=23.0
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|++++++-||++|+.||.|..
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 3456667889999999999999999975
No 250
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=25.39 E-value=90 Score=24.84 Aligned_cols=46 Identities=9% Similarity=0.309 Sum_probs=29.5
Q ss_pred CCHHHHHHHhhh--------cCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEE
Q 016668 238 VDYDMLEKTAIL--------FRPKLIIAGASAYPRDFDYPRMRQIADAVGALLM 283 (385)
Q Consensus 238 iD~d~le~~i~~--------~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~li 283 (385)
.|++.+.+.+.+ ++-.-|+++.+......|+.+|.++++++|..++
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLESPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECCSSCCHHHHHHHHHTTTCEEE
T ss_pred CCHHHHHHHHHHHHHhChHhhCCCcEEEEccccCChHHHHHHHHHHHHcCCEEE
Confidence 467666655532 1223455544333345799999999999998875
No 251
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=25.13 E-value=90 Score=28.71 Aligned_cols=57 Identities=14% Similarity=0.206 Sum_probs=40.5
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEEc--CCCC---C-CCCCHHHHHHHHHHcCcEEEEecccccc
Q 016668 235 TGL-VDYDMLEKTAIL----FRPKLIIAG--ASAY---P-RDFDYPRMRQIADAVGALLMMDMAHISG 291 (385)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~~--~s~~---~-~~~dl~~I~~ia~~~ga~livD~ah~~G 291 (385)
+|. .++++++..++. ..++++++. .+.| + ...|+..|..+.+..+..++.|..|+.|
T Consensus 152 ~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dssH~~g 219 (276)
T 1vs1_A 152 RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPSHPAG 219 (276)
T ss_dssp CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCHHHHC
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 565 488888776642 246777653 3333 3 3568888988887789999999999876
No 252
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=25.10 E-value=30 Score=34.45 Aligned_cols=27 Identities=19% Similarity=0.201 Sum_probs=23.4
Q ss_pred CCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 261 AYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 261 ~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
.+|+..|+++|++-||++|+.||.|..
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 101 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVMDLV 101 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455666899999999999999999985
No 253
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=25.07 E-value=98 Score=28.15 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=41.2
Q ss_pred CCC-CCHHHHHHHhhh----cCCcEEEEc-----CCCCC-CCCCHHHHHHHHHHcCcEEEEeccccccc
Q 016668 235 TGL-VDYDMLEKTAIL----FRPKLIIAG-----ASAYP-RDFDYPRMRQIADAVGALLMMDMAHISGL 292 (385)
Q Consensus 235 ~~~-iD~d~le~~i~~----~~pklIi~~-----~s~~~-~~~dl~~I~~ia~~~ga~livD~ah~~Gl 292 (385)
+|. .+++++...++. ..++++++. .++|+ ...|+..+..+.+..+..++.|.+|+.|.
T Consensus 137 ~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~ 205 (262)
T 1zco_A 137 RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGR 205 (262)
T ss_dssp CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCS
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCc
Confidence 454 488888777632 235676654 24565 35688889888887799999999998764
No 254
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.45 E-value=31 Score=34.09 Aligned_cols=28 Identities=7% Similarity=0.036 Sum_probs=24.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|+++|++-||++|+.||.|..
T Consensus 73 ~~~Gt~~df~~lv~~aH~~Gi~VilD~V 100 (483)
T 3bh4_A 73 TKYGTKSELQDAIGSLHSRNVQVYGDVV 100 (483)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 4467778999999999999999999975
No 255
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=24.03 E-value=32 Score=34.02 Aligned_cols=28 Identities=11% Similarity=0.063 Sum_probs=24.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|+++|++-||++|+.||.|..
T Consensus 77 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V 104 (485)
T 1wpc_A 77 TKYGTRSQLQAAVTSLKNNGIQVYGDVV 104 (485)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4467777999999999999999999975
No 256
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=23.51 E-value=33 Score=33.84 Aligned_cols=28 Identities=11% Similarity=0.044 Sum_probs=24.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|+++|++-||++|+.||.|..
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~VilD~V 102 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYGDVV 102 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 3467777999999999999999999975
No 257
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=23.00 E-value=30 Score=33.90 Aligned_cols=28 Identities=18% Similarity=0.129 Sum_probs=24.4
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|++++++-||++|+.||.|..
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 3466777899999999999999999975
No 258
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=22.80 E-value=34 Score=34.18 Aligned_cols=28 Identities=25% Similarity=0.345 Sum_probs=24.8
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|++++++-||++|+.||.|..
T Consensus 76 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 76 TKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 4567778999999999999999999975
No 259
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=22.57 E-value=36 Score=32.79 Aligned_cols=28 Identities=14% Similarity=0.207 Sum_probs=24.5
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|++++++-||++|+.||.|..
T Consensus 63 ~~~Gt~~d~~~lv~~~h~~Gi~VilD~V 90 (405)
T 1ht6_A 63 SKYGNAAELKSLIGALHGKGVQAIADIV 90 (405)
T ss_dssp CTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4566777899999999999999999975
No 260
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=22.50 E-value=35 Score=33.55 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=23.9
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|+++|++-||++|+.||.|..
T Consensus 92 p~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (478)
T 2guy_A 92 ENYGTADDLKALSSALHERGMYLMVDVV 119 (478)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4456667899999999999999999975
No 261
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=22.17 E-value=36 Score=33.19 Aligned_cols=28 Identities=21% Similarity=0.319 Sum_probs=24.6
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|+..|++++++-||++|+.||.|..
T Consensus 81 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 108 (435)
T 1mxg_A 81 TRFGSKEELVRLIQTAHAYGIKVIADVV 108 (435)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4567778899999999999999999975
No 262
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.12 E-value=1.6e+02 Score=22.40 Aligned_cols=51 Identities=12% Similarity=-0.026 Sum_probs=32.6
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCCCC--CC----CCCHHHHHHHHHHcCc-EEEEecc
Q 016668 237 LVDYDMLEKTAILFRPKLIIAGASAY--PR----DFDYPRMRQIADAVGA-LLMMDMA 287 (385)
Q Consensus 237 ~iD~d~le~~i~~~~pklIi~~~s~~--~~----~~dl~~I~~ia~~~ga-~livD~a 287 (385)
..|++.|++++++.++..|++|.|-+ +. ....+++++..++.++ +.++|+-
T Consensus 37 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DER 94 (98)
T 1iv0_A 37 EEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDER 94 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 45789999999888899999987643 22 2234555543333254 4457774
No 263
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=22.06 E-value=37 Score=34.07 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=24.7
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.+|...|+++|++-||++|+.||.|..
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V 114 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVV 114 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5567778899999999999999999975
No 264
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=20.46 E-value=39 Score=33.34 Aligned_cols=28 Identities=21% Similarity=0.315 Sum_probs=24.0
Q ss_pred CCCCCCCCHHHHHHHHHHcCcEEEEecc
Q 016668 260 SAYPRDFDYPRMRQIADAVGALLMMDMA 287 (385)
Q Consensus 260 s~~~~~~dl~~I~~ia~~~ga~livD~a 287 (385)
+.++...|++++++-||++|+.||.|..
T Consensus 92 ~~~Gt~~df~~lv~~~H~~Gi~VilD~V 119 (484)
T 2aaa_A 92 SNFGTADNLKSLSDALHARGMYLMVDVV 119 (484)
T ss_dssp TTTCCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4456667899999999999999999975
No 265
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=20.18 E-value=1.1e+02 Score=24.80 Aligned_cols=46 Identities=11% Similarity=0.102 Sum_probs=31.5
Q ss_pred HHHHHHhhhcCCcEEEEcCCCCCCCCCHHHHHHHHHHcCcEEEEeccccccccc
Q 016668 241 DMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVA 294 (385)
Q Consensus 241 d~le~~i~~~~pklIi~~~s~~~~~~dl~~I~~ia~~~ga~livD~ah~~Gli~ 294 (385)
+-+++.++ ..++.|++..+ . .-+++.++|+++|+.++-+++ .|+..
T Consensus 85 ~v~~~~~~-~g~~~i~i~~~---~--~~~~l~~~a~~~Gi~~igpnc--~g~~~ 130 (145)
T 2duw_A 85 GVAQEAIA-IGAKTLWLQLG---V--INEQAAVLAREAGLSVVMDRC--PAIEL 130 (145)
T ss_dssp HHHHHHHH-HTCCEEECCTT---C--CCHHHHHHHHTTTCEEECSCC--HHHHS
T ss_pred HHHHHHHH-cCCCEEEEcCC---h--HHHHHHHHHHHcCCEEEcCCe--eeEEc
Confidence 33444444 36787777532 1 158999999999999998887 46553
Done!