Citrus Sinensis ID: 016669


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-----
MIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA
ccccccccHHHHHHHHHHHHccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccccccccccHHHHHcHHHHcccEEEEcccccccccEEccHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHcccHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
cccccccHHHHHHHHHHHHHccccccHHHcccccEEEEcccccccccEEEEccccccHHHcccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHcHHHccHHHHHccccHHHHHHcHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccEHcccHHHHHHHHHHcccHHHHEEcccHHHHEEEcHccEEEccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccccccHHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccc
midqvqhpsVMQKVAGQLLHSSLSqniqdyerptmyqrrgaygnysnaafqypivsaattdlsmvpstASAICvqapaekgfaGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEmiksgrlsepykgigdCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFagnlgsggaagASSLLFVYSLDYARTRLANDAKAakkggerqfNGLVDVYRKTMksdgiaglyrgfNISCVGIIVYRGLYfgmydslkpvvltgklqdsfFASFALGWLItngaglasypiDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGkkygsgga
MIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDemiksgrlsepykGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDakaakkggerqfnglVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGkkygsgga
MIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNlgsggaagassllFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRavagagvlagYDKLQLIVFGKKYGSGGA
********************************PTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAA**GGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKY*****
*************V********************MYQRRGAYGNYSNAAFQYPIVSAATTDLSMV*******************FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD***********YKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAA****ERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYG****
********SVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA
****VQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKY*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MIDQVQHPSVMQKVAGQLLHSSLSQNIQDYERPTMYQRRGAYGNYSNAAFQYPIVSAATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIVFGKKYGSGGA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query385 2.2.26 [Sep-21-2011]
O22342386 ADP,ATP carrier protein 1 N/A no 0.992 0.989 0.894 0.0
P40941385 ADP,ATP carrier protein 2 yes no 0.987 0.987 0.833 0.0
P25083386 ADP,ATP carrier protein, N/A no 0.992 0.989 0.830 1e-179
P31167381 ADP,ATP carrier protein 1 no no 0.984 0.994 0.837 1e-179
P27081386 ADP,ATP carrier protein, N/A no 0.976 0.974 0.828 1e-173
P04709387 ADP,ATP carrier protein 1 N/A no 0.994 0.989 0.786 1e-167
P12857387 ADP,ATP carrier protein 2 N/A no 0.994 0.989 0.784 1e-166
P31691382 ADP,ATP carrier protein, yes no 0.981 0.989 0.784 1e-165
O49447379 ADP,ATP carrier protein 3 no no 0.979 0.994 0.776 1e-159
Q41629331 ADP,ATP carrier protein 1 N/A no 0.841 0.978 0.864 1e-155
>sp|O22342|ADT1_GOSHI ADP,ATP carrier protein 1, mitochondrial OS=Gossypium hirsutum GN=ANT1 PE=2 SV=1 Back     alignment and function desciption
 Score =  677 bits (1748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/388 (89%), Positives = 361/388 (93%), Gaps = 6/388 (1%)

Query: 2   IDQVQHPSVMQKVAGQLLHSSLSQNIQDY----ERPTMYQRRGAYGNYSNAAFQYPIVSA 57
           +DQVQHPSVMQKVAGQL  SS SQ+ Q Y      P +YQRR AYGNYSNAA Q+P+   
Sbjct: 1   MDQVQHPSVMQKVAGQLFRSSHSQDFQGYNGSFRSPALYQRRAAYGNYSNAALQHPV--R 58

Query: 58  ATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD 117
           A  DLSMVPSTASAICVQAPAEKGF+ FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD
Sbjct: 59  AFGDLSMVPSTASAICVQAPAEKGFSSFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQD 118

Query: 118 EMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLF 177
           EMIKSGRLSEPYKGIGDCFKRT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLF
Sbjct: 119 EMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLF 178

Query: 178 NFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLV 237
           NFKKDRDGYWKWFAGNL SGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLV
Sbjct: 179 NFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLV 238

Query: 238 DVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALG 297
           DVYRKT+KSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPV+LTG +QDSFFASF LG
Sbjct: 239 DVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGSMQDSFFASFVLG 298

Query: 298 WLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILR 357
           WLITNGA LASYPIDTVRRRMMMTSG+AVKYKSSLDAFSQILKNEG KSLFKGAG+NILR
Sbjct: 299 WLITNGAALASYPIDTVRRRMMMTSGKAVKYKSSLDAFSQILKNEGGKSLFKGAGSNILR 358

Query: 358 AVAGAGVLAGYDKLQLIVFGKKYGSGGA 385
           A+AGAGVLAGYDKLQLIVFGKKYGSGGA
Sbjct: 359 AIAGAGVLAGYDKLQLIVFGKKYGSGGA 386





Gossypium hirsutum (taxid: 3635)
>sp|P40941|ADT2_ARATH ADP,ATP carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=AAC2 PE=1 SV=2 Back     alignment and function description
>sp|P25083|ADT1_SOLTU ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1 Back     alignment and function description
>sp|P31167|ADT1_ARATH ADP,ATP carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=AAC1 PE=1 SV=2 Back     alignment and function description
>sp|P27081|ADT2_SOLTU ADP,ATP carrier protein, mitochondrial (Fragment) OS=Solanum tuberosum GN=ANT1 PE=2 SV=1 Back     alignment and function description
>sp|P04709|ADT1_MAIZE ADP,ATP carrier protein 1, mitochondrial OS=Zea mays GN=ANT1 PE=2 SV=3 Back     alignment and function description
>sp|P12857|ADT2_MAIZE ADP,ATP carrier protein 2, mitochondrial OS=Zea mays GN=ANT2 PE=2 SV=2 Back     alignment and function description
>sp|P31691|ADT_ORYSJ ADP,ATP carrier protein, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0718900 PE=2 SV=1 Back     alignment and function description
>sp|O49447|ADT3_ARATH ADP,ATP carrier protein 3, mitochondrial OS=Arabidopsis thaliana GN=AAC3 PE=1 SV=1 Back     alignment and function description
>sp|Q41629|ADT1_WHEAT ADP,ATP carrier protein 1, mitochondrial OS=Triticum aestivum GN=ANT-G1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query385
255582238385 ADP,ATP carrier protein, putative [Ricin 0.989 0.989 0.902 0.0
3334115386 RecName: Full=ADP,ATP carrier protein 1, 0.992 0.989 0.894 0.0
224059642389 predicted protein [Populus trichocarpa] 0.997 0.987 0.884 0.0
225435480393 PREDICTED: ADP,ATP carrier protein, mito 1.0 0.979 0.847 0.0
2780194388 adenine nucleotide translocator [Lupinus 0.989 0.981 0.857 0.0
225450149385 PREDICTED: ADP,ATP carrier protein 1, mi 0.989 0.989 0.866 0.0
224057451385 predicted protein [Populus trichocarpa] 0.994 0.994 0.852 0.0
356525661388 PREDICTED: ADP,ATP carrier protein 1, mi 0.992 0.984 0.856 0.0
307135851390 adenine nucleotide translocator [Cucumis 0.994 0.982 0.867 0.0
449450237390 PREDICTED: ADP,ATP carrier protein 1, mi 0.994 0.982 0.859 0.0
>gi|255582238|ref|XP_002531911.1| ADP,ATP carrier protein, putative [Ricinus communis] gi|223528451|gb|EEF30484.1| ADP,ATP carrier protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/389 (90%), Positives = 368/389 (94%), Gaps = 8/389 (2%)

Query: 1   MIDQVQHPSVMQKVAGQLLHSSLSQNIQDY----ERPTMYQRRGAYGNYSNAAFQYPIVS 56
           M DQVQ+PSVMQKVAGQ LHSSLSQ+ Q +    +RP +YQRR AYGNY+NAAFQYP+  
Sbjct: 1   MADQVQYPSVMQKVAGQYLHSSLSQDFQGFDGSLQRPALYQRR-AYGNYTNAAFQYPMGC 59

Query: 57  AATTDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ 116
           A   DLS+VP+TAS++CVQAP+EKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ
Sbjct: 60  A---DLSVVPTTASSVCVQAPSEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQ 116

Query: 117 DEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRL 176
           DEMIKSGRLSEPYKGIGDCFKRT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRL
Sbjct: 117 DEMIKSGRLSEPYKGIGDCFKRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRL 176

Query: 177 FNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGL 236
           FNFKKD+DGYWKWFAGNL SGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGL
Sbjct: 177 FNFKKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGL 236

Query: 237 VDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFAL 296
           VDVYRKT+ SDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTG LQDSFFASFAL
Sbjct: 237 VDVYRKTLASDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGNLQDSFFASFAL 296

Query: 297 GWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANIL 356
           GWLITNGAGLASYPIDTVRRRMMMTSGEAVKY+ SLDAFSQILKNEGAKSLFKGAGANIL
Sbjct: 297 GWLITNGAGLASYPIDTVRRRMMMTSGEAVKYRGSLDAFSQILKNEGAKSLFKGAGANIL 356

Query: 357 RAVAGAGVLAGYDKLQLIVFGKKYGSGGA 385
           RAVAGAGVLAGYDKLQLIVFGKKYGSGGA
Sbjct: 357 RAVAGAGVLAGYDKLQLIVFGKKYGSGGA 385




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|3334115|sp|O22342.1|ADT1_GOSHI RecName: Full=ADP,ATP carrier protein 1, mitochondrial; AltName: Full=ADP/ATP translocase 1; AltName: Full=Adenine nucleotide translocator 1; Short=ANT 1; Flags: Precursor gi|2463664|gb|AAB72047.1| adenine nucleotide translocator 1 [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|224059642|ref|XP_002299948.1| predicted protein [Populus trichocarpa] gi|222847206|gb|EEE84753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225435480|ref|XP_002285503.1| PREDICTED: ADP,ATP carrier protein, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|2780194|emb|CAA05979.1| adenine nucleotide translocator [Lupinus albus] Back     alignment and taxonomy information
>gi|225450149|ref|XP_002279748.1| PREDICTED: ADP,ATP carrier protein 1, mitochondrial-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224057451|ref|XP_002299232.1| predicted protein [Populus trichocarpa] gi|222846490|gb|EEE84037.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356525661|ref|XP_003531442.1| PREDICTED: ADP,ATP carrier protein 1, mitochondrial-like [Glycine max] Back     alignment and taxonomy information
>gi|307135851|gb|ADN33720.1| adenine nucleotide translocator [Cucumis melo subsp. melo] Back     alignment and taxonomy information
>gi|449450237|ref|XP_004142870.1| PREDICTED: ADP,ATP carrier protein 1, mitochondrial-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query385
TAIR|locus:2077778381 AAC1 "ADP/ATP carrier 1" [Arab 0.984 0.994 0.793 1.3e-162
TAIR|locus:2185041385 AAC2 "ADP/ATP carrier 2" [Arab 0.987 0.987 0.776 2.5e-161
TAIR|locus:2121363379 AAC3 "ADP/ATP carrier 3" [Arab 0.979 0.994 0.718 3e-140
UNIPROTKB|G4MKR0315 MGG_16149 "ADP,ATP carrier pro 0.787 0.961 0.714 5.6e-116
POMBASE|SPBC530.10c322 anc1 "mitochondrial adenine nu 0.768 0.919 0.716 5e-115
ASPGD|ASPL0000018215311 AN4064 [Emericella nidulans (t 0.779 0.964 0.713 1.3e-114
CGD|CAL0003655301 PET9 [Candida albicans (taxid: 0.771 0.986 0.694 1.8e-110
UNIPROTKB|Q5A516301 PET9 "Potential mitochondrial 0.771 0.986 0.694 1.8e-110
SGD|S000000126318 PET9 "Major ADP/ATP carrier of 0.789 0.955 0.668 6.3e-108
SGD|S000000289307 AAC3 "Mitochondrial inner memb 0.794 0.996 0.657 1.3e-107
TAIR|locus:2077778 AAC1 "ADP/ATP carrier 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1583 (562.3 bits), Expect = 1.3e-162, P = 1.3e-162
 Identities = 307/387 (79%), Positives = 332/387 (85%)

Query:     1 MIDQVQHPSVMQKVAGQLLHSSLSQNIQ-DYERPTMYQRRGAYGNYSNAAFQYPIVSAAT 59
             M+DQVQHP++ QK AGQ + SS+S+++Q  Y+RP+MYQR   YGNYSNAAFQ+P  S   
Sbjct:     1 MVDQVQHPTIAQKAAGQFMRSSVSKDVQVGYQRPSMYQRHATYGNYSNAAFQFPPTSR-- 58

Query:    60 TDLSMVPSTASAICVQAPAEKGFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM 119
                 M+ +TAS + VQ P EKGF  FA+DFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM
Sbjct:    59 ----MLATTASPVFVQTPGEKGFTNFALDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM 114

Query:   120 IKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNF 179
             IK+GRLSEPYKGIGDCF RT+KDEG  +LWRGNTANVIRYFPTQALNFAFKDYFKRLFNF
Sbjct:   115 IKAGRLSEPYKGIGDCFGRTIKDEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNF 174

Query:   180 KKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGE-RQFNGLVD 238
             KKDRDGYWKWFAGN             FVYSLDYARTRLANDAKAAKKGG  RQF+GLVD
Sbjct:   175 KKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVD 234

Query:   239 VYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGW 298
             VYRKT+K+DGIAGLYRGFNISCVGIIVYRGLYFG+YDS+KPV+LTG LQDSFFASFALGW
Sbjct:   235 VYRKTLKTDGIAGLYRGFNISCVGIIVYRGLYFGLYDSVKPVLLTGDLQDSFFASFALGW 294

Query:   299 LITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRX 358
             +ITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAF QILKNEGAKSLFKGAGANILR 
Sbjct:   295 VITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFKQILKNEGAKSLFKGAGANILRA 354

Query:   359 XXXXXXXXXYDKLQLIVFGKKYGSGGA 385
                      YDKLQLIVFGKKYGSGGA
Sbjct:   355 VAGAGVLSGYDKLQLIVFGKKYGSGGA 381




GO:0005215 "transporter activity" evidence=IEA
GO:0005471 "ATP:ADP antiporter activity" evidence=ISS;IDA
GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005740 "mitochondrial envelope" evidence=TAS
GO:0015865 "purine nucleotide transport" evidence=IDA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005730 "nucleolus" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005507 "copper ion binding" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=RCA
GO:0006094 "gluconeogenesis" evidence=RCA
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0007010 "cytoskeleton organization" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0010498 "proteasomal protein catabolic process" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
TAIR|locus:2185041 AAC2 "ADP/ATP carrier 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121363 AAC3 "ADP/ATP carrier 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|G4MKR0 MGG_16149 "ADP,ATP carrier protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
POMBASE|SPBC530.10c anc1 "mitochondrial adenine nucleotide carrier Anc1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
ASPGD|ASPL0000018215 AN4064 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0003655 PET9 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5A516 PET9 "Potential mitochondrial inner membrane ATP/ADP translocator" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms
SGD|S000000126 PET9 "Major ADP/ATP carrier of the mitochondrial inner membrane" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms
SGD|S000000289 AAC3 "Mitochondrial inner membrane ADP/ATP translocator" [Saccharomyces cerevisiae (taxid:4932)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49382ADT_KLULANo assigned EC number0.74170.78180.9868yesno
Q41630ADT2_WHEATNo assigned EC number0.84920.84150.9788N/Ano
P02723ADT_NEUCRNo assigned EC number0.77220.78700.9680N/Ano
P51881ADT2_MOUSENo assigned EC number0.55130.73760.9530yesno
Q5R5A1ADT2_PONABNo assigned EC number0.54390.72720.9395yesno
P18238ADT3_YEASTNo assigned EC number0.71330.79480.9967yesno
Q27238ADT1_ANOGANo assigned EC number0.56750.74800.9568yesno
P12857ADT2_MAIZENo assigned EC number0.78400.99480.9896N/Ano
O97470ADT_DICDINo assigned EC number0.51370.73760.9190yesno
Q09073ADT2_RATNo assigned EC number0.55130.73760.9530yesno
O22342ADT1_GOSHINo assigned EC number0.89430.99220.9896N/Ano
P27081ADT2_SOLTUNo assigned EC number0.82850.97660.9740N/Ano
P27080ADT_CHLRENo assigned EC number0.81120.77920.9740N/Ano
P31167ADT1_ARATHNo assigned EC number0.83720.98440.9947nono
O49447ADT3_ARATHNo assigned EC number0.77600.97920.9947nono
Q41629ADT1_WHEATNo assigned EC number0.86460.84150.9788N/Ano
P40941ADT2_ARATHNo assigned EC number0.83330.98700.9870yesno
P05141ADT2_HUMANNo assigned EC number0.55060.72720.9395yesno
P31691ADT_ORYSJNo assigned EC number0.78400.98180.9895yesno
P32007ADT3_BOVINNo assigned EC number0.54840.73500.9496yesno
P04709ADT1_MAIZENo assigned EC number0.78660.99480.9896N/Ano
Q09188ADT_SCHPONo assigned EC number0.77700.76880.9192yesno
P25083ADT1_SOLTUNo assigned EC number0.83030.99220.9896N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query385
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 1e-121
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-27
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-21
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 4e-18
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
 Score =  352 bits (905), Expect = e-121
 Identities = 166/295 (56%), Positives = 205/295 (69%), Gaps = 12/295 (4%)

Query: 85  FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEM--IKSGRLSEPYKGIGDCFKRTMKD 142
           FA DFLMGG+SAA+SKTA APIERVK+LIQ QD +  IKSG++   Y GI +CF+R  K+
Sbjct: 7   FATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKV-PRYSGIVNCFRRVSKE 65

Query: 143 EGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLF-NFKKDRDGYWKWFAGNLGSGGAAG 201
           +G+++LWRGNTANVIRYFPTQA NFAFKDYFK +F  + +  D +WK+F  N+ SGG AG
Sbjct: 66  QGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMFPKYNQKTD-FWKFFGVNILSGGLAG 124

Query: 202 ASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCV 261
           ASSLL VY LD+ARTRLA+D     KGG+R+F GL D   K  K  G   LY+GF +S  
Sbjct: 125 ASSLLIVYPLDFARTRLASD---IGKGGDREFTGLFDCLMKISKQTGFLSLYQGFGVSVQ 181

Query: 262 GIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMT 321
           GIIVYRG YFG+YDS K ++       +    +A+   +T  AGL SYP DTVRRRMMM 
Sbjct: 182 GIIVYRGAYFGLYDSAKALLFGNDKNTNILYKWAVAQTVTILAGLISYPFDTVRRRMMMM 241

Query: 322 SG----EAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQ 372
           SG      ++Y  +LD + +ILKNEG    FKGA AN+LR   GA VL  YD+LQ
Sbjct: 242 SGRKAKSEIQYTGTLDCWKKILKNEGLGGFFKGAWANVLRGAGGALVLVFYDELQ 296


Length = 300

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 385
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.98
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.98
KOG0765333 consensus Predicted mitochondrial carrier protein 99.98
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.97
KOG0770353 consensus Predicted mitochondrial carrier protein 99.97
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.96
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0766297 consensus Predicted mitochondrial carrier protein 99.96
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.96
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0769 308 consensus Predicted mitochondrial carrier protein 99.94
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.93
KOG0767 333 consensus Mitochondrial phosphate carrier protein 99.93
KOG1519297 consensus Predicted mitochondrial carrier protein 99.92
KOG2745321 consensus Mitochondrial carrier protein [General f 99.9
KOG2954427 consensus Mitochondrial carrier protein [General f 99.81
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.75
KOG1519297 consensus Predicted mitochondrial carrier protein 99.72
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.72
KOG2745321 consensus Mitochondrial carrier protein [General f 99.56
KOG2954427 consensus Mitochondrial carrier protein [General f 98.63
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=1.1e-59  Score=405.12  Aligned_cols=286  Identities=26%  Similarity=0.406  Sum_probs=250.4

Q ss_pred             hhHHHHHHHHHHHHHHHHhhchHHHHHHHHHcCchhhhcCCCCCCCCcHHHHHhHHhhccccchhcccchhhHHhhhhhh
Q 016669           84 GFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQ  163 (385)
Q Consensus        84 ~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~~~  163 (385)
                      ..+.++++|.+||++++++.||+|++|+|+|++...   ....+.|++++++++.|+|.||++|||||+.|++++..+.+
T Consensus         4 ~~~~~~iaG~~aG~~stl~vhPlDl~K~R~qa~~g~---~~~~~~y~g~~~~~~tI~r~eG~rGLY~Gl~P~v~G~~~sW   80 (299)
T KOG0764|consen    4 VQWEPLIAGLSAGFASTLVVHPLDLVKIRFQASDGR---TSLRPAYKGIFGALKTIFRSEGLRGLYRGLSPNVLGSAPSW   80 (299)
T ss_pred             cchhhhhhhhhhhhhhhhhccchhHhhhhhhhccCc---cccchhhccHHHHHHHHHHhhhHHHHhccCcHHHHhchhhH
Confidence            345677999999999999999999999999998321   12245699999999999999999999999999999999999


Q ss_pred             hhHHhHHHHHHHHhcccCCCCCchhhhhhHhhhhHHHHHHHHHhhchHHHHHHHHhcCcchhhcCCCcccCcHHHHHHHH
Q 016669          164 ALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKT  243 (385)
Q Consensus       164 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~dviktr~q~~~~~~~~~~~~~~~~~~~~~~~i  243 (385)
                      ++||.+||.+|+++.+..+...  .+...++.+++.||+++.++|+|+.|+|||++.+...   .....|+++++++++|
T Consensus        81 giYF~~Y~~~K~~~~~~~~~~~--l~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL~~Q~~~---~~~~~Y~~~f~a~rki  155 (299)
T KOG0764|consen   81 GLYFFFYDFLKSFITEGFNSGL--LSVLANLSSAAEAGAATTILTNPIWVVKTRLMLQSKN---VQSTAYKGMFDALRKI  155 (299)
T ss_pred             HHHHHHHHHHHHHHhcCCCccc--chHHHHHHHHHhhhHHHHHhcCCeEEEeehhhhhccc---ccccccccHHHHHHHH
Confidence            9999999999999965544332  3567899999999999999999999999999998762   2346899999999999


Q ss_pred             HHhhCcccccccchhHHHHHHHHHhHHHHHHHhhHHhHhc--CCCCC---chHHHHHHHHHHHhchhhhcchHHHHHHhH
Q 016669          244 MKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLT--GKLQD---SFFASFALGWLITNGAGLASYPIDTVRRRM  318 (385)
Q Consensus       244 ~~~~G~~gly~G~~~~~lr~~~~~~i~f~~ye~~k~~~~~--~~~~~---~~~~~~~~g~~ag~~a~~~t~Pldviktr~  318 (385)
                      +++||++|||+|+.|.++... +.+++|.+||.+|..+.+  +.+.|   .....++.+.++.++|+.+|||++|+|+||
T Consensus       156 ~k~EG~rgLY~GlVP~L~Gvs-hgAiQF~~YE~lK~~~~~~~~~~~d~~l~n~~~i~~as~SKv~Ast~TYP~qVlRtRL  234 (299)
T KOG0764|consen  156 YKEEGFRGLYKGLVPGLLGVS-HGAIQFPAYEELKLRKNRKQGRSTDNHLSNLDYIALASLSKVFASTLTYPHQVLRTRL  234 (299)
T ss_pred             HHHHhHHHHHhhhhhHhhhhc-hhhhhhhhHHHHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            999999999999999999655 999999999999999854  22222   335666777799999999999999999999


Q ss_pred             hhccCCCCCCCCHHHHHHHHHHhhChhhhccchHHHHHhhhhhhHH-HHHHHHHHHHHccCC
Q 016669          319 MMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGV-LAGYDKLQLIVFGKK  379 (385)
Q Consensus       319 q~~~~~~~~~~~~~~~~~~i~r~eG~~g~yrG~~~~l~~~~~~~~~-f~~ye~~~~~l~~~~  379 (385)
                      |.++. .+.|+++++|++++||+||++|||||+.++++|..|.+.+ |.+||.++++|....
T Consensus       235 Q~~~~-~~~~~~~~~lIk~t~r~eG~~GfYkG~~~nLvR~vPA~~ITF~vyEnv~~~L~~~~  295 (299)
T KOG0764|consen  235 QDQSD-NPRYRGVFDLIKKTWRNEGFRGFYKGLATNLVRTVPAACITFLVYENVKHFLVTHR  295 (299)
T ss_pred             Hhccc-CcccccHHHHHHHHHHHhchhhHHHHhHHHHhhccccceeeeehHHHHHHHHhccc
Confidence            98754 6789999999999999999999999999999999999888 999999999887543



>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query385
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 6e-69
2lck_A 303 Structure Of The Mitochondrial Uncoupling Protein 2 5e-06
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 257 bits (657), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 145/299 (48%), Positives = 183/299 (61%), Gaps = 16/299 (5%) Query: 85 FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 144 F DFL GGV+AA+SKTA APIERVKLL+Q Q K + YKGI DC R K++G Sbjct: 7 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQG 65 Query: 145 IVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNXXXXXXXXXX 203 ++ WRGN ANVIRYFPTQALNFAFKD +K++F DR +W++FAGN Sbjct: 66 FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 125 Query: 204 XXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGI 263 FVY LD+ARTRLA D K +R+F GL + K KSDG+ GLY+GFN+S GI Sbjct: 126 SLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 183 Query: 264 IVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLI----TNGAGLASYPIDTVRRRMM 319 I+YR YFG+YD+ K G L D + W+I T AGL SYP DTVRRRMM Sbjct: 184 IIYRAAYFGVYDTAK-----GMLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 238 Query: 320 MTSGEA---VKYKSSLDAFSQILKNEGAKSLFKGAGANILRXXXXXXXXXXYDKLQLIV 375 M SG + Y ++D + +I K+EG K+ FKGA +N+LR YD+++ V Sbjct: 239 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 297
>pdb|2LCK|A Chain A, Structure Of The Mitochondrial Uncoupling Protein 2 Determined By Nmr Molecular Fragment Replacement Length = 303 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query385
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 1e-140
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 7e-41
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 1e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 2e-23
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  400 bits (1029), Expect = e-140
 Identities = 156/296 (52%), Positives = 198/296 (66%), Gaps = 8/296 (2%)

Query: 84  GFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDE 143
            F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++
Sbjct: 6   SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQH-ASKQISAEKQYKGIIDCVVRIPKEQ 64

Query: 144 GIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDR-DGYWKWFAGNLGSGGAAGA 202
           G ++ WRGN ANVIRYFPTQALNFAFKD +K++F    DR   +W++FAGNL SGGAAGA
Sbjct: 65  GFLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGA 124

Query: 203 SSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVG 262
           +SL FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GFN+S  G
Sbjct: 125 TSLCFVYPLDFARTRLAAD--VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQG 182

Query: 263 IIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTS 322
           II+YR  YFG+YD+ K  +L          S+ +   +T  AGL SYP DTVRRRMMM S
Sbjct: 183 IIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQS 241

Query: 323 GEA---VKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV 375
           G     + Y  ++D + +I K+EG K+ FKGA +N+LR + GA VL  YD+++  V
Sbjct: 242 GRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV 297


>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query385
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-57  Score=423.62  Aligned_cols=290  Identities=52%  Similarity=0.862  Sum_probs=244.4

Q ss_pred             chhhHHHHHHHHHHHHHHHHhhchHHHHHHHHHcCchhhhcCCCCCCCCcHHHHHhHHhhccccchhcccchhhHHhhhh
Q 016669           82 FAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFP  161 (385)
Q Consensus        82 ~~~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~~  161 (385)
                      ..+.+.+++||++||+++.++++|+|+||+|+|++....+. .....|+++++++++|+++||++|||||+.++++++++
T Consensus         4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~-~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~   82 (297)
T 1okc_A            4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQI-SAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFP   82 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSC-CGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhccccccc-ccccccccHHHHHHHHHhccchhheecccHHHHHHHHH
Confidence            34678899999999999999999999999999998642111 11235899999999999999999999999999999999


Q ss_pred             hhhhHHhHHHHHHHHhccc-CCCCCchhhhhhHhhhhHHHHHHHHHhhchHHHHHHHHhcCcchhhcCCCcccCcHHHHH
Q 016669          162 TQALNFAFKDYFKRLFNFK-KDRDGYWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVY  240 (385)
Q Consensus       162 ~~~~~f~~ye~~k~~~~~~-~~~~~~~~~~~~~~~~g~~ag~~~~~i~~P~dviktr~q~~~~~~~~~~~~~~~~~~~~~  240 (385)
                      .++++|.+||.+|+.+... ...+.........+++|++||++++++++|+|+||+|+|++...  ......|+++++++
T Consensus        83 ~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--~~~~~~~~~~~~~~  160 (297)
T 1okc_A           83 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK--GAAQREFTGLGNCI  160 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS--STTTCSCSSHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccC--CCcCcCCCCHHHHH
Confidence            9999999999999954332 22222223456689999999999999999999999999997531  12245789999999


Q ss_pred             HHHHHhhCcccccccchhHHHHHHHHHhHHHHHHHhhHHhHhcCCCCCchHHHHHHHHHHHhchhhhcchHHHHHHhHhh
Q 016669          241 RKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMM  320 (385)
Q Consensus       241 ~~i~~~~G~~gly~G~~~~~lr~~~~~~i~f~~ye~~k~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~Pldviktr~q~  320 (385)
                      ++|+++||+++||||+.|+++|.+|.++++|.+||.+|+.+.+. .+.+....+++|.++|++++++++|+||||+|||.
T Consensus       161 ~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~-~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~  239 (297)
T 1okc_A          161 TKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMM  239 (297)
T ss_dssp             HHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC-CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhh
Confidence            99999999999999999999999999999999999999977543 23456778999999999999999999999999998


Q ss_pred             ccCC---CCCCCCHHHHHHHHHHhhChhhhccchHHHHHhhhhhhHHHHHHHHHHHHH
Q 016669          321 TSGE---AVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQLIV  375 (385)
Q Consensus       321 ~~~~---~~~~~~~~~~~~~i~r~eG~~g~yrG~~~~l~~~~~~~~~f~~ye~~~~~l  375 (385)
                      +...   ...|.++++|+++|+|+||++|||||+.|+++|..+.++.|.+||.+|+++
T Consensus       240 ~~~~~~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~~~~~~f~~ye~~k~~l  297 (297)
T 1okc_A          240 QSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEIKKFV  297 (297)
T ss_dssp             TTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC----
T ss_pred             cCCCCCCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhhccceeeehHHHHHHhhC
Confidence            7532   346999999999999999999999999999999755444499999998764



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 385
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 8e-48
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score =  162 bits (409), Expect = 8e-48
 Identities = 151/291 (51%), Positives = 191/291 (65%), Gaps = 8/291 (2%)

Query: 85  FAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEG 144
           F  DFL GGV+AA+SKTA APIERVKLL+Q Q    K     + YKGI DC  R  K++G
Sbjct: 6   FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHAS-KQISAEKQYKGIIDCVVRIPKEQG 64

Query: 145 IVALWRGNTANVIRYFPTQALNFAFKD-YFKRLFNFKKDRDGYWKWFAGNLGSGGAAGAS 203
            ++ WRGN ANVIRYFPTQALNFAFKD Y +           +W++FAGNL SGGAAGA+
Sbjct: 65  FLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGAT 124

Query: 204 SLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGI 263
           SL FVY LD+ARTRLA D    K   +R+F GL +   K  KSDG+ GLY+GFN+S  GI
Sbjct: 125 SLCFVYPLDFARTRLAADVG--KGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGI 182

Query: 264 IVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSG 323
           I+YR  YFG+YD+ K ++           S+ +   +T  AGL SYP DTVRRRMMM SG
Sbjct: 183 IIYRAAYFGVYDTAKGML-PDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 241

Query: 324 EA---VKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKL 371
                + Y  ++D + +I K+EG K+ FKGA +N+LR + GA VL  YD++
Sbjct: 242 RKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI 292


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query385
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.5e-52  Score=385.89  Aligned_cols=287  Identities=53%  Similarity=0.870  Sum_probs=251.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHhhchHHHHHHHHHcCchhhhcCCCCCCCCcHHHHHhHHhhccccchhcccchhhHHhhh
Q 016669           81 GFAGFAIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYF  160 (385)
Q Consensus        81 ~~~~~~~~~~aG~~a~~~~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~glyrG~~~~~~~~~  160 (385)
                      +..+++..++||++|++++.+++||+|+||+|+|++..... ......|+++++++++++++||+++||||+.+.+++..
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~   80 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ-ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYF   80 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS-CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCC-CCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhh
Confidence            34578999999999999999999999999999999865322 22345689999999999999999999999999999999


Q ss_pred             hhhhhHHhHHHHHHHHhcccCCCCC-chhhhhhHhhhhHHHHHHHHHhhchHHHHHHHHhcCcchhhcCCCcccCcHHHH
Q 016669          161 PTQALNFAFKDYFKRLFNFKKDRDG-YWKWFAGNLGSGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDV  239 (385)
Q Consensus       161 ~~~~~~f~~ye~~k~~~~~~~~~~~-~~~~~~~~~~~g~~ag~~~~~i~~P~dviktr~q~~~~~~~~~~~~~~~~~~~~  239 (385)
                      +...++|.+||.+++.+.......+ ........+++|++||+++.++++|+|++|+|+|.+...  ......|.+.+++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~--~~~~~~~~~~~~~  158 (292)
T d1okca_          81 PTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK--GAAQREFTGLGNC  158 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS--STTTCSCSSHHHH
T ss_pred             cccchhHHHHHHHHHHHhcccccccccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccc--cccccccccHHHH
Confidence            9999999999999998876654433 334456778999999999999999999999999998652  2234578899999


Q ss_pred             HHHHHHhhCcccccccchhHHHHHHHHHhHHHHHHHhhHHhHhcCCCCCchHHHHHHHHHHHhchhhhcchHHHHHHhHh
Q 016669          240 YRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVVLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMM  319 (385)
Q Consensus       240 ~~~i~~~~G~~gly~G~~~~~lr~~~~~~i~f~~ye~~k~~~~~~~~~~~~~~~~~~g~~ag~~a~~~t~Pldviktr~q  319 (385)
                      +++++++||+++||+|+.++++|++|.++++|.+||.+|+.+.+. ........++++.++++++++++||+||||+|||
T Consensus       159 ~~~~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~~~~~~~~~a~~~t~P~dvvktR~q  237 (292)
T d1okca_         159 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP-KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM  237 (292)
T ss_dssp             HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG-GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhhhccchhhhhccccccccceehHhhhhhhhccchhhhcccc-cccchHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence            999999999999999999999999999999999999999877543 3456778899999999999999999999999999


Q ss_pred             hccCC---CCCCCCHHHHHHHHHHhhChhhhccchHHHHHhhhhhhHHHHHHHHH
Q 016669          320 MTSGE---AVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKL  371 (385)
Q Consensus       320 ~~~~~---~~~~~~~~~~~~~i~r~eG~~g~yrG~~~~l~~~~~~~~~f~~ye~~  371 (385)
                      .+..+   ...|.+++||+++|+++||++|||||+.|+++|.++++++|.+||.+
T Consensus       238 ~~~~~~~~~~~y~~~~~~~~~i~~~eG~~~lyrG~~~~~~r~i~~~i~~~~ye~l  292 (292)
T d1okca_         238 MQSGRKGADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRGMGGAFVLVLYDEI  292 (292)
T ss_dssp             TTTTCCGGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hcCCCCCCCCCCCCHHHHHHHHHHhcCcCcccccHHHHHHHHHHHHhhhhHhhcC
Confidence            98643   34688999999999999999999999999999988876669999964



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure