Query 016670
Match_columns 385
No_of_seqs 180 out of 720
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 17:28:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016670.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016670hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 79.9 1.9 6.4E-05 37.1 4.7 52 296-369 73-124 (200)
2 4hf7_A Putative acylhydrolase; 72.0 1.3 4.5E-05 38.8 1.5 30 335-368 101-130 (209)
3 3hp4_A GDSL-esterase; psychrot 67.8 1.6 5.5E-05 36.6 1.1 14 199-212 2-15 (185)
4 3rjt_A Lipolytic protein G-D-S 61.8 3 0.0001 35.4 1.6 26 334-363 112-137 (216)
5 3mil_A Isoamyl acetate-hydroly 55.8 3.7 0.00013 35.6 1.2 30 334-367 95-124 (240)
6 1ivn_A Thioesterase I; hydrola 54.6 3.8 0.00013 34.7 1.1 30 334-367 81-111 (190)
7 1yzf_A Lipase/acylhydrolase; s 51.9 4.5 0.00015 33.7 1.1 51 296-368 66-116 (195)
8 2q0q_A ARYL esterase; SGNH hyd 47.7 5.4 0.00018 34.1 0.9 33 334-366 104-141 (216)
9 2hsj_A Putative platelet activ 45.6 8.4 0.00029 32.9 1.8 34 334-369 104-137 (214)
10 3dc7_A Putative uncharacterize 44.4 8.1 0.00028 33.7 1.6 19 194-212 16-34 (232)
11 3dci_A Arylesterase; SGNH_hydr 43.7 6.7 0.00023 34.6 0.9 35 334-368 122-159 (232)
12 1vjg_A Putative lipase from th 42.5 6.2 0.00021 34.1 0.5 52 297-367 88-140 (218)
13 1fxw_F Alpha2, platelet-activa 41.4 10 0.00036 33.2 1.8 23 191-213 29-53 (229)
14 3p94_A GDSL-like lipase; serin 40.3 9.9 0.00034 32.0 1.4 31 334-368 96-126 (204)
15 1es9_A PAF-AH, platelet-activa 39.3 11 0.00038 32.9 1.6 16 198-213 37-52 (232)
16 3bzw_A Putative lipase; protei 38.3 12 0.0004 34.0 1.7 16 197-212 24-39 (274)
17 2vpt_A Lipolytic enzyme; ester 34.0 13 0.00046 32.1 1.3 14 199-212 5-18 (215)
18 2w9x_A AXE2A, CJCE2B, putative 31.1 17 0.00059 34.9 1.7 28 334-363 266-293 (366)
19 2waa_A Acetyl esterase, xylan 30.1 15 0.00053 35.0 1.1 48 297-363 225-272 (347)
20 2wao_A Endoglucanase E; plant 28.8 17 0.00058 34.5 1.1 15 198-212 121-135 (341)
21 3tpf_A Otcase, ornithine carba 28.7 30 0.001 33.5 2.8 25 197-223 143-168 (307)
22 4h08_A Putative hydrolase; GDS 28.1 1.1E+02 0.0039 25.5 6.3 36 172-221 3-42 (200)
23 3grf_A Ornithine carbamoyltran 28.0 30 0.001 33.8 2.7 27 196-223 158-184 (328)
24 4f2g_A Otcase 1, ornithine car 26.8 30 0.001 33.5 2.4 26 196-223 151-176 (309)
25 3q98_A Transcarbamylase; rossm 26.7 32 0.0011 34.5 2.8 27 197-223 189-220 (399)
26 4amu_A Ornithine carbamoyltran 26.5 34 0.0012 33.9 2.8 26 197-223 178-203 (365)
27 3r7f_A Aspartate carbamoyltran 25.9 34 0.0012 33.0 2.7 27 197-223 145-171 (304)
28 2yfk_A Aspartate/ornithine car 25.1 38 0.0013 34.2 2.9 27 197-223 186-217 (418)
29 3t6g_B Breast cancer anti-estr 23.9 4 0.00014 38.2 -4.1 19 194-212 141-159 (229)
30 1vcc_A DNA topoisomerase I; DN 23.7 12 0.0004 29.3 -0.9 10 202-211 57-67 (77)
31 3csu_A Protein (aspartate carb 23.0 42 0.0014 32.4 2.7 28 196-223 151-178 (310)
32 3sds_A Ornithine carbamoyltran 23.0 41 0.0014 33.2 2.6 25 197-223 186-210 (353)
33 2o14_A Hypothetical protein YX 22.6 31 0.001 33.5 1.6 29 334-366 251-279 (375)
34 2lon_A HIG1 domain family memb 28.0 18 0.00063 29.6 0.0 29 35-64 15-43 (99)
35 1pg5_A Aspartate carbamoyltran 22.0 49 0.0017 31.8 2.9 28 196-223 146-173 (299)
36 1k7c_A Rhamnogalacturonan acet 21.8 28 0.00096 30.9 1.1 28 336-367 109-136 (233)
37 3skv_A SSFX3; jelly roll, GDSL 20.9 31 0.0011 34.0 1.3 13 199-211 185-197 (385)
38 4ep1_A Otcase, ornithine carba 20.1 51 0.0017 32.3 2.6 25 197-223 177-201 (340)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=79.90 E-value=1.9 Score=37.06 Aligned_cols=52 Identities=25% Similarity=0.349 Sum_probs=35.4
Q ss_pred CCccEEEEeccccccccccccceeeeccCCccccccCHHHHHHHHHHHHHHHHHhccCCCCceEEEEeCCCCCC
Q 016670 296 RDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHF 369 (385)
Q Consensus 296 ~~~DVLVfNtGhWw~~~k~~~~g~~f~~g~~v~~~m~~~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~HF 369 (385)
..+|+||++.|..= . ....+.|+..|+.+++.+.+. ..++++++-+..|...
T Consensus 73 ~~pd~Vvi~~G~ND--------------~------~~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 73 TKFDVIHFNNGLHG--------------F------DYTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRT 124 (200)
T ss_dssp SCCSEEEECCCSSC--------------T------TSCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEE
T ss_pred CCCCeEEEEeeeCC--------------C------CCCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcc
Confidence 56899999998420 0 012456888888888877664 2466788888888543
No 2
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=71.98 E-value=1.3 Score=38.76 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEEeCCCCC
Q 016670 335 TAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVH 368 (385)
Q Consensus 335 ~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~H 368 (385)
+.+..-++++++.+.+ .+++|++-|+.|..
T Consensus 101 ~~~~~~l~~ii~~~~~----~~~~iil~~~~P~~ 130 (209)
T 4hf7_A 101 DYTFGNIASMAELAKA----NKIKVILTSVLPAA 130 (209)
T ss_dssp HHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHhhHHHhc----cCceEEEEeeeccC
Confidence 4455566666665543 36678888887754
No 3
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=67.78 E-value=1.6 Score=36.63 Aligned_cols=14 Identities=14% Similarity=0.570 Sum_probs=12.7
Q ss_pred CCcEEEEecchhHH
Q 016670 199 NRRLVFVGDSIGRN 212 (385)
Q Consensus 199 gKriaFVGDSl~RN 212 (385)
|++|+|+|||++..
T Consensus 2 ~~~i~~~GDSit~G 15 (185)
T 3hp4_A 2 DNTILILGDXLSAA 15 (185)
T ss_dssp CEEEEEEECTTTTT
T ss_pred CCeEEEECCccccc
Confidence 78999999999974
No 4
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=61.80 E-value=3 Score=35.40 Aligned_cols=26 Identities=4% Similarity=0.188 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEEEe
Q 016670 334 ETAFEKAIETLIHWIGSQVNMDKTQVLFRT 363 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT 363 (385)
.+.|+..|+.+++.+.+. +.++++-|
T Consensus 112 ~~~~~~~l~~~i~~~~~~----~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR----VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG----SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc----CCeEEEEC
Confidence 567888999988888765 55677766
No 5
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=55.83 E-value=3.7 Score=35.63 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEEEeCCCC
Q 016670 334 ETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPV 367 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~ 367 (385)
.+.|+..++.+++-+.+. +.+|++-+..|.
T Consensus 95 ~~~~~~~l~~~i~~~~~~----~~~vil~~~~p~ 124 (240)
T 3mil_A 95 LPEFIDNIRQMVSLMKSY----HIRPIIIGPGLV 124 (240)
T ss_dssp HHHHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHc----CCeEEEEcCCCC
Confidence 456777777777767653 346777776553
No 6
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=54.59 E-value=3.8 Score=34.67 Aligned_cols=30 Identities=10% Similarity=0.245 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEEEeC-CCC
Q 016670 334 ETAFEKAIETLIHWIGSQVNMDKTQVLFRTY-APV 367 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~-SP~ 367 (385)
.+.|+..++.+++.+.+. +.++++-+. .|.
T Consensus 81 ~~~~~~~l~~li~~~~~~----~~~vil~~~~~p~ 111 (190)
T 1ivn_A 81 PQQTEQTLRQILQDVKAA----NAEPLLMQIRLPA 111 (190)
T ss_dssp HHHHHHHHHHHHHHHHHT----TCEEEEECCCCCG
T ss_pred HHHHHHHHHHHHHHHHHc----CCCEEEEeccCCc
Confidence 456777888887777654 345666554 454
No 7
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=51.95 E-value=4.5 Score=33.65 Aligned_cols=51 Identities=22% Similarity=0.220 Sum_probs=30.6
Q ss_pred CCccEEEEeccccccccccccceeeeccCCccccccCHHHHHHHHHHHHHHHHHhccCCCCceEEEEeCCCCC
Q 016670 296 RDADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVH 368 (385)
Q Consensus 296 ~~~DVLVfNtGhWw~~~k~~~~g~~f~~g~~v~~~m~~~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~H 368 (385)
..+|++|+..|.-=. . .+. . ...+.|+..++.+++.+. +.++++-+..|..
T Consensus 66 ~~pd~vvi~~G~ND~----------~-~~~----~-~~~~~~~~~l~~~i~~~~------~~~vi~~~~~p~~ 116 (195)
T 1yzf_A 66 EKPDEVVIFFGANDA----------S-LDR----N-ITVATFRENLETMIHEIG------SEKVILITPPYAD 116 (195)
T ss_dssp GCCSEEEEECCTTTT----------C-TTS----C-CCHHHHHHHHHHHHHHHC------GGGEEEECCCCCC
T ss_pred cCCCEEEEEeecccc----------C-ccC----C-CCHHHHHHHHHHHHHHhc------CCEEEEEcCCCCc
Confidence 467999999884110 0 000 0 124567777777777664 4567777777753
No 8
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=47.74 E-value=5.4 Score=34.11 Aligned_cols=33 Identities=12% Similarity=0.175 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHhccC-----CCCceEEEEeCCC
Q 016670 334 ETAFEKAIETLIHWIGSQVN-----MDKTQVLFRTYAP 366 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d-----~~kt~VFfRT~SP 366 (385)
.+.|+..++.+++.+.+.-. ..+.+|++-+..|
T Consensus 104 ~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 104 PLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 45788888888888876520 0346677776544
No 9
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=45.57 E-value=8.4 Score=32.91 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEEEeCCCCCC
Q 016670 334 ETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVHF 369 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~HF 369 (385)
.+.|+..++.+++.+.+.. .+.+|++-+..|...
T Consensus 104 ~~~~~~~l~~~i~~l~~~~--p~~~iil~~~~p~~~ 137 (214)
T 2hsj_A 104 VNEALNNLEAIIQSVARDY--PLTEIKLLSILPVNE 137 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCeEEEEecCCCCc
Confidence 3457777777777776642 345788888877653
No 10
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=44.39 E-value=8.1 Score=33.71 Aligned_cols=19 Identities=32% Similarity=0.445 Sum_probs=14.5
Q ss_pred HHHhcCCcEEEEecchhHH
Q 016670 194 LQKLRNRRLVFVGDSIGRN 212 (385)
Q Consensus 194 Le~LRgKriaFVGDSl~RN 212 (385)
...+..++|+|+|||++..
T Consensus 16 ~~~~~~~~i~~lGDSit~G 34 (232)
T 3dc7_A 16 NGHVSFKRPAWLGDSITAN 34 (232)
T ss_dssp --CBCCSSEEEEESTTTST
T ss_pred ccCCCcceEEEEccccccc
Confidence 3445678999999999975
No 11
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=43.68 E-value=6.7 Score=34.55 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHhccC---CCCceEEEEeCCCCC
Q 016670 334 ETAFEKAIETLIHWIGSQVN---MDKTQVLFRTYAPVH 368 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d---~~kt~VFfRT~SP~H 368 (385)
.+.|+..|+.+++.+.+... ..+++|++-+..|..
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~~ 159 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCV 159 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCcC
Confidence 46788888888888876421 145677777755543
No 12
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=42.52 E-value=6.2 Score=34.09 Aligned_cols=52 Identities=17% Similarity=0.103 Sum_probs=31.4
Q ss_pred CccEEEEeccccccccccccceeee-ccCCccccccCHHHHHHHHHHHHHHHHHhccCCCCceEEEEeCCCC
Q 016670 297 DADVLIFNTGHWWNFEKTIREGCYF-EERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPV 367 (385)
Q Consensus 297 ~~DVLVfNtGhWw~~~k~~~~g~~f-~~g~~v~~~m~~~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~ 367 (385)
.+|++|+..|.- . .. ..+ ..-...+.|+..++.+++.+.+. .+|++-+..|.
T Consensus 88 ~pd~vvi~~G~N-----D-----~~~~~~----~~~~~~~~~~~~l~~li~~l~~~-----~~iil~~~~p~ 140 (218)
T 1vjg_A 88 YNSLVVFSFGLN-----D-----TTLENG----KPRVSIAETIKNTREILTQAKKL-----YPVLMISPAPY 140 (218)
T ss_dssp SEEEEEEECCHH-----H-----HCEETT----EESSCHHHHHHHHHHHHHHHHHH-----SCEEEECCCCC
T ss_pred CCCEEEEEecCC-----c-----chhhcc----cccCCHHHHHHHHHHHHHHHHHh-----CcEEEECCCCc
Confidence 679999999841 0 00 000 00112456778888887777665 45777777665
No 13
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=41.45 E-value=10 Score=33.22 Aligned_cols=23 Identities=22% Similarity=0.407 Sum_probs=16.9
Q ss_pred HHHHHHh--cCCcEEEEecchhHHH
Q 016670 191 RNMLQKL--RNRRLVFVGDSIGRNQ 213 (385)
Q Consensus 191 ~~FLe~L--RgKriaFVGDSl~RNq 213 (385)
..|.+.. ...+|+|+|||++...
T Consensus 29 ~~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 29 NRFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHHcccCCCCEEEEecchhcCC
Confidence 4455443 5679999999999864
No 14
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=40.26 E-value=9.9 Score=31.98 Aligned_cols=31 Identities=10% Similarity=0.156 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEEEeCCCCC
Q 016670 334 ETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAPVH 368 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~H 368 (385)
.+.|+..++.+++.+.+ .+.++++-|..|..
T Consensus 96 ~~~~~~~~~~~i~~~~~----~~~~vil~~~~p~~ 126 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA----NHIKVIFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHHHH----TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHh----CCCeEEEEeCCCCC
Confidence 45677777777777765 25578888877754
No 15
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=39.26 E-value=11 Score=32.94 Aligned_cols=16 Identities=31% Similarity=0.603 Sum_probs=13.8
Q ss_pred cCCcEEEEecchhHHH
Q 016670 198 RNRRLVFVGDSIGRNQ 213 (385)
Q Consensus 198 RgKriaFVGDSl~RNq 213 (385)
...+|+|+|||++...
T Consensus 37 ~~~~i~~~GDSit~g~ 52 (232)
T 1es9_A 37 KEPEVVFIGDSLVQLM 52 (232)
T ss_dssp CCCSEEEEESHHHHTH
T ss_pred CCCCEEEEechHhhcc
Confidence 5679999999999973
No 16
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=38.28 E-value=12 Score=34.02 Aligned_cols=16 Identities=25% Similarity=0.594 Sum_probs=13.4
Q ss_pred hcCCcEEEEecchhHH
Q 016670 197 LRNRRLVFVGDSIGRN 212 (385)
Q Consensus 197 LRgKriaFVGDSl~RN 212 (385)
..+++|+|+|||++..
T Consensus 24 ~~~~~iv~lGDSiT~G 39 (274)
T 3bzw_A 24 WQGKKVGYIGDSITDP 39 (274)
T ss_dssp TTTCEEEEEESTTTCT
T ss_pred CCCCEEEEEecCcccC
Confidence 4578999999999864
No 17
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=33.98 E-value=13 Score=32.06 Aligned_cols=14 Identities=29% Similarity=0.404 Sum_probs=11.8
Q ss_pred CCcEEEEecchhHH
Q 016670 199 NRRLVFVGDSIGRN 212 (385)
Q Consensus 199 gKriaFVGDSl~RN 212 (385)
..+|+|+|||++..
T Consensus 5 ~~~i~~~GDSit~G 18 (215)
T 2vpt_A 5 TIKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEEESHHHHT
T ss_pred ceEEEecccccccC
Confidence 34899999999975
No 18
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=31.15 E-value=17 Score=34.92 Aligned_cols=28 Identities=7% Similarity=0.183 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEEEe
Q 016670 334 ETAFEKAIETLIHWIGSQVNMDKTQVLFRT 363 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT 363 (385)
.+.|+..++.+++-+.+.- .++++++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~~--p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSNN--ARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHC--TTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCeEEEEe
Confidence 4678888888888887652 355676666
No 19
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=30.13 E-value=15 Score=35.01 Aligned_cols=48 Identities=6% Similarity=0.194 Sum_probs=28.7
Q ss_pred CccEEEEeccccccccccccceeeeccCCccccccCHHHHHHHHHHHHHHHHHhccCCCCceEEEEe
Q 016670 297 DADVLIFNTGHWWNFEKTIREGCYFEERGELKKKMSVETAFEKAIETLIHWIGSQVNMDKTQVLFRT 363 (385)
Q Consensus 297 ~~DVLVfNtGhWw~~~k~~~~g~~f~~g~~v~~~m~~~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT 363 (385)
.+|+||++-|- + +.. .+ ....+.|+.+++.+++-|.+.- .+++|++-+
T Consensus 225 ~Pd~VvI~lG~-----N-----D~~-~~------~~~~~~~~~~l~~li~~ir~~~--p~~~I~l~~ 272 (347)
T 2waa_A 225 QPDLIISAIGT-----N-----DFS-PG------IPDRATYINTYTRFVRTLLDNH--PQATIVLTE 272 (347)
T ss_dssp CCSEEEECCCH-----H-----HHS-SS------CCCHHHHHHHHHHHHHHHHHHC--TTCEEEECC
T ss_pred CCCEEEEEccc-----c-----CCC-CC------CCcHHHHHHHHHHHHHHHHHHC--CCCEEEEEe
Confidence 57999999982 0 000 00 1224567778888877776642 355666654
No 20
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=28.85 E-value=17 Score=34.48 Aligned_cols=15 Identities=40% Similarity=0.689 Sum_probs=12.7
Q ss_pred cCCcEEEEecchhHH
Q 016670 198 RNRRLVFVGDSIGRN 212 (385)
Q Consensus 198 RgKriaFVGDSl~RN 212 (385)
..++|+|+|||++-.
T Consensus 121 ~~~~I~~iGDSiT~G 135 (341)
T 2wao_A 121 LERKIEFIGDSITCA 135 (341)
T ss_dssp CSEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 467999999999864
No 21
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=28.68 E-value=30 Score=33.48 Aligned_cols=25 Identities=28% Similarity=0.344 Sum_probs=21.1
Q ss_pred hc-CCcEEEEecchhHHHHHHHHHhhhh
Q 016670 197 LR-NRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 197 LR-gKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
++ |++|+|||| . -|.-.|++.++..
T Consensus 143 l~~gl~va~vGD-~-~~va~Sl~~~~~~ 168 (307)
T 3tpf_A 143 QNGIAKVAFIGD-S-NNMCNSWLITAAI 168 (307)
T ss_dssp GGGCCEEEEESC-S-SHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcC-C-CccHHHHHHHHHH
Confidence 56 999999999 3 4688999988875
No 22
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=28.08 E-value=1.1e+02 Score=25.50 Aligned_cols=36 Identities=31% Similarity=0.748 Sum_probs=23.7
Q ss_pred cCcee--eeecC--CCCCCCcCHHHHHHHhcCCcEEEEecchhHHHHHHHHHhh
Q 016670 172 FYTKW--RWQPK--ACNLPRFDARNMLQKLRNRRLVFVGDSIGRNQWESLLCML 221 (385)
Q Consensus 172 ~Yl~W--RWQP~--gC~LPrFd~~~FLe~LRgKriaFVGDSl~RNq~eSLlCLL 221 (385)
+|..| .|-|. .=++| ||+|+||||+..-...|..+|
T Consensus 3 ~~~ew~~~~~p~~~~~~~p--------------rVl~iGDSit~G~~~~l~~~l 42 (200)
T 4h08_A 3 EYIEWSDIWIPGANKTDLP--------------HVLLIGNSITRGYYGKVEAAL 42 (200)
T ss_dssp SSCCCEEEECTTTTCCSSC--------------EEEEEESHHHHHHHHHHHHHT
T ss_pred ceeehhhhccCCcccCCCC--------------eEEEEchhHHhhhHHHHHHHh
Confidence 57777 47774 44555 699999999986433444444
No 23
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=28.02 E-value=30 Score=33.78 Aligned_cols=27 Identities=22% Similarity=0.303 Sum_probs=23.2
Q ss_pred HhcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 196 KLRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 196 ~LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
.+.|++|++|||-.+ |.-.||+.+|..
T Consensus 158 ~l~gl~va~vGD~~~-~va~Sl~~~~~~ 184 (328)
T 3grf_A 158 GFKGIKFAYCGDSMN-NVTYDLMRGCAL 184 (328)
T ss_dssp TGGGCCEEEESCCSS-HHHHHHHHHHHH
T ss_pred ccCCcEEEEeCCCCc-chHHHHHHHHHH
Confidence 578999999999766 689999988875
No 24
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=26.79 E-value=30 Score=33.48 Aligned_cols=26 Identities=19% Similarity=0.357 Sum_probs=21.6
Q ss_pred HhcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 196 KLRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 196 ~LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
.+.|++|+||||- -|.-.||+.++..
T Consensus 151 ~l~glkva~vGD~--~~va~Sl~~~~~~ 176 (309)
T 4f2g_A 151 PIRGKTVAWVGDA--NNMLYTWIQAARI 176 (309)
T ss_dssp CCTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCC--cchHHHHHHHHHH
Confidence 3679999999994 4588999998875
No 25
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=26.74 E-value=32 Score=34.46 Aligned_cols=27 Identities=11% Similarity=0.367 Sum_probs=21.5
Q ss_pred hcCCcEEEEec---chhH--HHHHHHHHhhhh
Q 016670 197 LRNRRLVFVGD---SIGR--NQWESLLCMLAS 223 (385)
Q Consensus 197 LRgKriaFVGD---Sl~R--Nq~eSLlCLL~~ 223 (385)
++|++|++||| |.+| |.-.||+.++..
T Consensus 189 l~Glkva~vgd~~~~~G~~nnVa~Sli~~~~~ 220 (399)
T 3q98_A 189 LKGKKIAMTWAYSPSYGKPLSVPQGIIGLMTR 220 (399)
T ss_dssp GTTCEEEEECCCCSSCCCCTHHHHHHHHHHGG
T ss_pred cCCCEEEEEEecccccCcchHHHHHHHHHHHH
Confidence 57889999998 3455 788999988865
No 26
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=26.51 E-value=34 Score=33.95 Aligned_cols=26 Identities=35% Similarity=0.434 Sum_probs=22.2
Q ss_pred hcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 197 LRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 197 LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
++|++|+||||-.+ |.-.||+.++..
T Consensus 178 l~glkva~vGD~~n-nva~Sl~~~~~~ 203 (365)
T 4amu_A 178 LKNKKIVFIGDYKN-NVGVSTMIGAAF 203 (365)
T ss_dssp CTTCEEEEESSTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCc-chHHHHHHHHHH
Confidence 68999999999766 588899988864
No 27
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=25.90 E-value=34 Score=33.01 Aligned_cols=27 Identities=15% Similarity=0.063 Sum_probs=22.8
Q ss_pred hcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 197 LRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 197 LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
++|++|++|||-..-|.-.||+.++..
T Consensus 145 l~glkva~vGD~~~~rva~Sl~~~~~~ 171 (304)
T 3r7f_A 145 FKGLTVSIHGDIKHSRVARSNAEVLTR 171 (304)
T ss_dssp CTTCEEEEESCCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHH
Confidence 679999999997666788999888865
No 28
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=25.12 E-value=38 Score=34.22 Aligned_cols=27 Identities=11% Similarity=0.342 Sum_probs=22.5
Q ss_pred hcCCcEEEEec---chhH--HHHHHHHHhhhh
Q 016670 197 LRNRRLVFVGD---SIGR--NQWESLLCMLAS 223 (385)
Q Consensus 197 LRgKriaFVGD---Sl~R--Nq~eSLlCLL~~ 223 (385)
++|++|++||| |.+| |.-.||+-+|..
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l~~ 217 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLMTR 217 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHHGG
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHHHH
Confidence 67899999997 4567 889999998875
No 29
>3t6g_B Breast cancer anti-estrogen resistance protein 1; CDC25-homology domain, GTPase exchange factor, focal-adhesio targeting domain, signaling protein; 2.50A {Homo sapiens}
Probab=23.88 E-value=4 Score=38.19 Aligned_cols=19 Identities=37% Similarity=0.774 Sum_probs=16.5
Q ss_pred HHHhcCCcEEEEecchhHH
Q 016670 194 LQKLRNRRLVFVGDSIGRN 212 (385)
Q Consensus 194 Le~LRgKriaFVGDSl~RN 212 (385)
+-.|-+.+++||||.|.|+
T Consensus 141 ~VIlsAHKLVfIGDTL~r~ 159 (229)
T 3t6g_B 141 FVILSAHKLVFIGDTLSRQ 159 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEeeeeeeecchHHHh
Confidence 5578899999999999985
No 30
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=23.66 E-value=12 Score=29.26 Aligned_cols=10 Identities=80% Similarity=1.338 Sum_probs=4.8
Q ss_pred EEEEe-cchhH
Q 016670 202 LVFVG-DSIGR 211 (385)
Q Consensus 202 iaFVG-DSl~R 211 (385)
|+||| ||-+|
T Consensus 57 lIfvG~DSKgr 67 (77)
T 1vcc_A 57 LIFVGSDSKGR 67 (77)
T ss_dssp EEEEEECTTSC
T ss_pred eEEEeecCCCc
Confidence 55555 44444
No 31
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=23.01 E-value=42 Score=32.43 Aligned_cols=28 Identities=32% Similarity=0.287 Sum_probs=23.1
Q ss_pred HhcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 196 KLRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 196 ~LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
.+.|++|++|||-..-|...||+-++..
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 178 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAK 178 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHT
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 3679999999996655689999998865
No 32
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=22.99 E-value=41 Score=33.18 Aligned_cols=25 Identities=24% Similarity=0.356 Sum_probs=21.1
Q ss_pred hcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 197 LRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 197 LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
++|++|++|||- .|...||+.+|..
T Consensus 186 l~glkva~vGD~--~nva~Sl~~~l~~ 210 (353)
T 3sds_A 186 LEGLKIAWVGDA--NNVLFDLAIAATK 210 (353)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC--chHHHHHHHHHHH
Confidence 379999999997 3688999988875
No 33
>2o14_A Hypothetical protein YXIM; NESG, X-RAY, SR595, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacillus subtilis} SCOP: b.18.1.32 c.23.10.8
Probab=22.56 E-value=31 Score=33.54 Aligned_cols=29 Identities=17% Similarity=0.368 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEEEeCCC
Q 016670 334 ETAFEKAIETLIHWIGSQVNMDKTQVLFRTYAP 366 (385)
Q Consensus 334 ~~Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP 366 (385)
.+.|+..|+.+++.+.+. +.++++-|.-|
T Consensus 251 ~~~~~~~l~~ii~~lr~~----~a~vilvtP~~ 279 (375)
T 2o14_A 251 EAEFKEVMRDMIRQVKAK----GADVILSTPQG 279 (375)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHC----CCEEEEECCCC
Confidence 466888888888877653 35677766443
No 34
>2lon_A HIG1 domain family member 1B; membrane protein, helical bundle; NMR {Homo sapiens}
Probab=28.00 E-value=18 Score=29.57 Aligned_cols=29 Identities=31% Similarity=0.403 Sum_probs=14.5
Q ss_pred chHHHHHHhhcccCCCchhHHHHHHHHHHH
Q 016670 35 MTHLDFWKKFKRLNPLEPSLGILGFILVAA 64 (385)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 64 (385)
.+..|=+.+--+-+||-| +|++|+..+++
T Consensus 15 es~~~K~~rk~ke~Plvp-Ig~l~~~~vl~ 43 (99)
T 2lon_A 15 DCVSEKLLRKTRESPLVP-IGLGGCLVVAA 43 (99)
Confidence 344554444444577777 45554443333
No 35
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=21.96 E-value=49 Score=31.78 Aligned_cols=28 Identities=21% Similarity=0.248 Sum_probs=23.2
Q ss_pred HhcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 196 KLRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 196 ~LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
.++|++|++|||-..-|...||+-++..
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~ 173 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTR 173 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGG
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHh
Confidence 3679999999997655688999988875
No 36
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=21.82 E-value=28 Score=30.86 Aligned_cols=28 Identities=14% Similarity=0.318 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHhccCCCCceEEEEeCCCC
Q 016670 336 AFEKAIETLIHWIGSQVNMDKTQVLFRTYAPV 367 (385)
Q Consensus 336 Ayr~ALrt~~~wi~~~~d~~kt~VFfRT~SP~ 367 (385)
.|+..|+.+++-+.+. +.++++-|..|.
T Consensus 109 ~~~~~l~~~i~~~~~~----g~~vil~tp~p~ 136 (233)
T 1k7c_A 109 TFPAYLENAAKLFTAK----GAKVILSSQTPN 136 (233)
T ss_dssp BHHHHHHHHHHHHHHT----TCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHC----CCEEEEECCCCc
Confidence 4777777777766543 346777666654
No 37
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=20.86 E-value=31 Score=33.97 Aligned_cols=13 Identities=31% Similarity=0.457 Sum_probs=11.6
Q ss_pred CCcEEEEecchhH
Q 016670 199 NRRLVFVGDSIGR 211 (385)
Q Consensus 199 gKriaFVGDSl~R 211 (385)
.++|+|+|||++.
T Consensus 185 ~~~Iv~~GDSiT~ 197 (385)
T 3skv_A 185 KPHWIHYGDSICH 197 (385)
T ss_dssp CCEEEEEECSSCT
T ss_pred CceEEEEeccccC
Confidence 6899999999974
No 38
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=20.06 E-value=51 Score=32.35 Aligned_cols=25 Identities=36% Similarity=0.535 Sum_probs=21.3
Q ss_pred hcCCcEEEEecchhHHHHHHHHHhhhh
Q 016670 197 LRNRRLVFVGDSIGRNQWESLLCMLAS 223 (385)
Q Consensus 197 LRgKriaFVGDSl~RNq~eSLlCLL~~ 223 (385)
++|++|+||||- -|.-.||+.++..
T Consensus 177 l~glkva~vGD~--~nva~Sl~~~~~~ 201 (340)
T 4ep1_A 177 FKGIKLAYVGDG--NNVCHSLLLASAK 201 (340)
T ss_dssp CTTCEEEEESCC--CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC--chhHHHHHHHHHH
Confidence 679999999996 4588899988865
Done!